Guide to the Human Genome
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Name: RNF121 Sequence: fasta or formatted (327aa) NCBI GI: 21361732
Description:

ring finger protein 121

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         21           2
 C cysteine            2.4          8           1
 D aspartate           3.4         11           1
 E glutamate           6.4         21           2
 F phenylalanine       5.5         18           1
 G glycine             6.4         21           3
 H histidine           3.4         11           1
 I isoleucine          5.8         19           2
 K lysine              4.3         14           2
 L leucine            10.4         34           3
 M methionine          4.6         15           1
 N asparagine          1.8          6           1
 P proline             3.4         11           1
 Q glutamine           3.7         12           2
 R arginine            4.9         16           1
 S serine              4.3         14           1
 T threonine           4.3         14           2
 V valine             10.4         34           2
 W tryptophan          3.4         11           2
 Y tyrosine            4.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 121 
RNF175                0.725   ring finger protein 175 
SYVN1                 0.034   synoviolin 1 isoform b 
SYVN1                 0.034   synoviolin 1 isoform a 
RNF111                0.029   ring finger protein 111 
RNF151                0.029   ring finger protein 151 
RNF165                0.026   ring finger protein 165 
RNF13                 0.024   ring finger protein 13 
RNF13                 0.024   ring finger protein 13 
RNF139                0.021   ring finger protein 139 
ZNRF4                 0.021   zinc and ring finger 4 
RNF128                0.020   ring finger protein 128 isoform 1 
RNF128                0.020   ring finger protein 128 isoform 2 
RNF32                 0.020   ring finger protein 32 
RNF167                0.020   ring finger protein 167 
RNF126                0.018   ring finger protein 126 
BRAP                  0.018   BRCA1 associated protein 
BFAR                  0.018   bifunctional apoptosis regulator 
ZNRF3                 0.018   zinc and ring finger 3 
RNF115                0.018   Rabring 7 
RNF214                0.018   ring finger protein 214 
RNF214                0.018   ring finger protein 214 
RNF145                0.018   ring finger protein 145 
LOC100290625          0.015   PREDICTED: hypothetical protein XP_002347002 
LOC100289630          0.015   PREDICTED: hypothetical protein XP_002342853 
RNF149                0.015   ring finger protein 149 
RNF181                0.015   ring finger protein 181 
RNF103                0.015   ring finger protein 103 
DZIP3                 0.015   DAZ interacting protein 3, zinc finger 
RNF44                 0.015   ring finger protein 44 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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