Guide to the Human Genome
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Name: RNF181 Sequence: fasta or formatted (153aa) NCBI GI: 7706039
Description:

ring finger protein 181

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2          8           2
 C cysteine            4.6          7           1
 D aspartate           7.2         11           3
 E glutamate          11.8         18           4
 F phenylalanine       3.3          5           1
 G glycine             2.0          3           1
 H histidine           5.9          9           2
 I isoleucine          2.0          3           1
 K lysine              3.3          5           1
 L leucine            11.8         18           2
 M methionine          3.3          5           1
 N asparagine          3.3          5           1
 P proline             7.2         11           3
 Q glutamine           3.9          6           4
 R arginine            6.5         10           2
 S serine              5.2          8           2
 T threonine           5.9          9           1
 V valine              3.9          6           2
 W tryptophan          1.3          2           1
 Y tyrosine            2.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 181 
RNF115                0.184   Rabring 7 
PJA2                  0.161   praja 2, RING-H2 motif containing 
PJA1                  0.155   praja 1 isoform c 
PJA1                  0.155   praja 1 isoform b 
PJA1                  0.155   praja 1 isoform a 
RNF126                0.148   ring finger protein 126 
RNF165                0.105   ring finger protein 165 
RNF167                0.102   ring finger protein 167 
RNF130                0.102   ring finger protein 130 
RLIM                  0.099   ring finger protein, LIM domain interacting 
RLIM                  0.099   ring finger protein, LIM domain interacting 
RNF111                0.095   ring finger protein 111 
ZNRF4                 0.095   zinc and ring finger 4 
RNF150                0.095   ring finger protein 150 
RNF43                 0.092   ring finger protein 43 
RNF13                 0.092   ring finger protein 13 
RNF13                 0.092   ring finger protein 13 
RNF38                 0.092   ring finger protein 38 isoform 2 
RNF38                 0.092   ring finger protein 38 isoform 2 
RNF38                 0.092   ring finger protein 38 isoform 3 
RNF38                 0.092   ring finger protein 38 isoform 2 
RNF38                 0.092   ring finger protein 38 isoform 1 
AMFR                  0.089   autocrine motility factor receptor 
RNF44                 0.082   ring finger protein 44 
RNF103                0.082   ring finger protein 103 
PEX10                 0.079   peroxisome biogenesis factor 10 isoform 1 
PEX10                 0.079   peroxisome biogenesis factor 10 isoform 2 
RNF149                0.079   ring finger protein 149 
ZNRF3                 0.079   zinc and ring finger 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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