Guide to the Human Genome
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Name: ZNRF3 Sequence: fasta or formatted (836aa) NCBI GI: 150378447
Description:

zinc and ring finger 3

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         59           2
 C cysteine            4.3         36           3
 D aspartate           4.1         34           1
 E glutamate           6.1         51           3
 F phenylalanine       2.4         20           2
 G glycine             9.6         80           5
 H histidine           3.9         33           2
 I isoleucine          2.3         19           2
 K lysine              2.9         24           1
 L leucine             7.8         65           2
 M methionine          1.1          9           1
 N asparagine          2.4         20           3
 P proline             9.3         78           3
 Q glutamine           4.1         34           2
 R arginine            6.6         55           2
 S serine             12.4        104           7
 T threonine           4.4         37           2
 V valine              5.1         43           3
 W tryptophan          0.6          5           1
 Y tyrosine            3.6         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc and ring finger 3 
RNF43                 0.127   ring finger protein 43 
RNF150                0.040   ring finger protein 150 
RNF130                0.035   ring finger protein 130 
RNF13                 0.034   ring finger protein 13 
RNF13                 0.034   ring finger protein 13 
RNF215                0.030   ring finger protein 215 
RNF128                0.028   ring finger protein 128 isoform 2 
RNF128                0.028   ring finger protein 128 isoform 1 
RNF167                0.028   ring finger protein 167 
RNF149                0.027   ring finger protein 149 
RNF133                0.024   ring finger protein 133 
RNF165                0.023   ring finger protein 165 
ZNRF4                 0.022   zinc and ring finger 4 
RNF148                0.022   ring finger protein 148 
RLIM                  0.021   ring finger protein, LIM domain interacting 
RLIM                  0.021   ring finger protein, LIM domain interacting 
LOC100290625          0.021   PREDICTED: hypothetical protein XP_002347002 
LOC100289630          0.021   PREDICTED: hypothetical protein XP_002342853 
RNF6                  0.021   ring finger protein 6 
RNF6                  0.021   ring finger protein 6 
RNF6                  0.021   ring finger protein 6 
RNF115                0.020   Rabring 7 
DZIP3                 0.020   DAZ interacting protein 3, zinc finger 
RNF126                0.020   ring finger protein 126 
RNF111                0.020   ring finger protein 111 
RNF38                 0.019   ring finger protein 38 isoform 2 
RNF38                 0.019   ring finger protein 38 isoform 2 
RNF38                 0.019   ring finger protein 38 isoform 3 
RNF38                 0.019   ring finger protein 38 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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