Guide to the Human Genome
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Search of human proteins with 27734829

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27734829 hypothetical protein LOC256329 [Homo sapiens]
         (634 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27734829 hypothetical protein LOC256329 [Homo sapiens]            1298   0.0  
gi|224593273 intermediate filament tail domain containing 1 isof...    49   2e-05
gi|224593271 intermediate filament tail domain containing 1 isof...    49   2e-05
gi|224593268 intermediate filament tail domain containing 1 isof...    49   2e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     46   9e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     46   9e-05
gi|157785548 PAS domain containing 1 [Homo sapiens]                    44   5e-04
gi|18959210 WIRE protein [Homo sapiens]                                44   5e-04
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa...    42   0.001
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]          42   0.002
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]          42   0.002
gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi...    42   0.002
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    42   0.002
gi|7662176 ProSAPiP1 protein [Homo sapiens]                            41   0.004
gi|41281612 zinc finger protein 828 [Homo sapiens]                     41   0.004
gi|119508426 alpha 3 type IX collagen [Homo sapiens]                   40   0.005
gi|215599324 coiled-coil domain containing 114 isoform 2 [Homo s...    40   0.005
gi|4505101 microtubule-associated protein 7 [Homo sapiens]             40   0.005
gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens]        40   0.005
gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens]        40   0.005
gi|236459851 ubinuclein 2 [Homo sapiens]                               40   0.007
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    40   0.007
gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sap...    40   0.007
gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap...    40   0.007
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]            40   0.007
gi|166295204 hypothetical protein LOC80127 [Homo sapiens]              40   0.007
gi|59806357 submaxillary gland androgen regulated protein 3 homo...    40   0.007
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap...    40   0.007
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    40   0.007
gi|110815800 WD repeat domain 32 [Homo sapiens]                        40   0.009

>gi|27734829 hypothetical protein LOC256329 [Homo sapiens]
          Length = 634

 Score = 1298 bits (3359), Expect = 0.0
 Identities = 634/634 (100%), Positives = 634/634 (100%)

Query: 1   MRWLRPAGRRREQESVSGHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLD 60
           MRWLRPAGRRREQESVSGHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLD
Sbjct: 1   MRWLRPAGRRREQESVSGHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLD 60

Query: 61  PRTLRLLWRQRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQNQVQKL 120
           PRTLRLLWRQRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQNQVQKL
Sbjct: 61  PRTLRLLWRQRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQNQVQKL 120

Query: 121 IQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRMLRSQ 180
           IQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRMLRSQ
Sbjct: 121 IQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRMLRSQ 180

Query: 181 TGSVEVVTAETLMDPSDLSENIQAPTGEGFRLEDVDWNSVARRYPNLFTNMEPSSKQKQP 240
           TGSVEVVTAETLMDPSDLSENIQAPTGEGFRLEDVDWNSVARRYPNLFTNMEPSSKQKQP
Sbjct: 181 TGSVEVVTAETLMDPSDLSENIQAPTGEGFRLEDVDWNSVARRYPNLFTNMEPSSKQKQP 240

Query: 241 RPWPQLDTGSPESSGKHSERHHKTVEWGSLPCLNTSSSGGADSDSSSCRPGLPSFVQVIG 300
           RPWPQLDTGSPESSGKHSERHHKTVEWGSLPCLNTSSSGGADSDSSSCRPGLPSFVQVIG
Sbjct: 241 RPWPQLDTGSPESSGKHSERHHKTVEWGSLPCLNTSSSGGADSDSSSCRPGLPSFVQVIG 300

Query: 301 HPPRDHRASSEQALVQAGSYSRDSEDLQKTHSPRHGEPVLSPQPCTDPDHWSPELLQSPT 360
           HPPRDHRASSEQALVQAGSYSRDSEDLQKTHSPRHGEPVLSPQPCTDPDHWSPELLQSPT
Sbjct: 301 HPPRDHRASSEQALVQAGSYSRDSEDLQKTHSPRHGEPVLSPQPCTDPDHWSPELLQSPT 360

Query: 361 GLKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTV 420
           GLKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTV
Sbjct: 361 GLKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTV 420

Query: 421 WGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRIPRRETPAPRVFADG 480
           WGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRIPRRETPAPRVFADG
Sbjct: 421 WGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRIPRRETPAPRVFADG 480

Query: 481 TDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFH 540
           TDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFH
Sbjct: 481 TDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFH 540

Query: 541 AREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHRVRVCRKSVDRS 600
           AREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHRVRVCRKSVDRS
Sbjct: 541 AREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHRVRVCRKSVDRS 600

Query: 601 CPLVALSVQNTAESRFGFRFLSCLPVTADTCRGA 634
           CPLVALSVQNTAESRFGFRFLSCLPVTADTCRGA
Sbjct: 601 CPLVALSVQNTAESRFGFRFLSCLPVTADTCRGA 634


>gi|224593273 intermediate filament tail domain containing 1 isoform
           1 [Homo sapiens]
          Length = 409

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 27/101 (26%), Positives = 48/101 (47%)

Query: 362 LKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTVW 421
           ++I  V+ +  FV++ N S +    +   +L+Q V G    LYRF P  ++     VTVW
Sbjct: 169 VEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVW 228

Query: 422 GEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLS 462
             A+ +  +P      +E     +   C T+L  P G+ ++
Sbjct: 229 AAASEAKHQPPSDFLWKEQDKFRASPDCITILCKPNGQAIA 269


>gi|224593271 intermediate filament tail domain containing 1 isoform
           3 [Homo sapiens]
          Length = 325

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 27/101 (26%), Positives = 48/101 (47%)

Query: 362 LKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTVW 421
           ++I  V+ +  FV++ N S +    +   +L+Q V G    LYRF P  ++     VTVW
Sbjct: 85  VEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVW 144

Query: 422 GEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLS 462
             A+ +  +P      +E     +   C T+L  P G+ ++
Sbjct: 145 AAASEAKHQPPSDFLWKEQDKFRASPDCITILCKPNGQAIA 185


>gi|224593268 intermediate filament tail domain containing 1 isoform
           2 [Homo sapiens]
          Length = 388

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 27/101 (26%), Positives = 48/101 (47%)

Query: 362 LKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTVW 421
           ++I  V+ +  FV++ N S +    +   +L+Q V G    LYRF P  ++     VTVW
Sbjct: 148 VEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVW 207

Query: 422 GEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLS 462
             A+ +  +P      +E     +   C T+L  P G+ ++
Sbjct: 208 AAASEAKHQPPSDFLWKEQDKFRASPDCITILCKPNGQAIA 248


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 36/108 (33%), Positives = 44/108 (40%), Gaps = 14/108 (12%)

Query: 472 PAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLP 531
           P P    +G  +     P P + PG  T  PP PP P   G  R P      PG+ G+ P
Sbjct: 643 PPPPPLPEGVGI-----PSPSSLPGG-TAIPPPPPLP---GSARIPPPPPPLPGSAGIPP 693

Query: 532 PVSS--GKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGL 577
           P     G+       P  P  P IP P   P  PG P +P PP   G+
Sbjct: 694 PPPPLPGEAGMPPPPPPLPGGPGIPPP---PPFPGGPGIPPPPPGMGM 738



 Score = 37.0 bits (84), Expect = 0.056
 Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 13/101 (12%)

Query: 472 PAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLP 531
           P+P     GT +     P P   PG+    PP PP P   G    P      PG  G+ P
Sbjct: 655 PSPSSLPGGTAI-----PPPPPLPGSARIPPPPPPLP---GSAGIPPPPPPLPGEAGMPP 706

Query: 532 PVSSGKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPP 572
           P           GP  P  P  P    +P  P    +P PP
Sbjct: 707 PPPP-----LPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPP 742



 Score = 33.9 bits (76), Expect = 0.47
 Identities = 30/87 (34%), Positives = 32/87 (36%), Gaps = 10/87 (11%)

Query: 491 PEAGPGADTRKPP-----RPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGP 545
           P   PG  T  PP      PP PL  G       S   PG   + PP            P
Sbjct: 589 PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPS--LPGGTAISPPPPLSGDATIPPPP 646

Query: 546 ARPENPEIPAPQHLP---AIPGDPTLP 569
             PE   IP+P  LP   AIP  P LP
Sbjct: 647 PLPEGVGIPSPSSLPGGTAIPPPPPLP 673


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 46.2 bits (108), Expect = 9e-05
 Identities = 36/108 (33%), Positives = 44/108 (40%), Gaps = 14/108 (12%)

Query: 472 PAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLP 531
           P P    +G  +     P P + PG  T  PP PP P   G  R P      PG+ G+ P
Sbjct: 652 PPPPPLPEGVGI-----PSPSSLPGG-TAIPPPPPLP---GSARIPPPPPPLPGSAGIPP 702

Query: 532 PVSS--GKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGL 577
           P     G+       P  P  P IP P   P  PG P +P PP   G+
Sbjct: 703 PPPPLPGEAGMPPPPPPLPGGPGIPPP---PPFPGGPGIPPPPPGMGM 747



 Score = 37.0 bits (84), Expect = 0.056
 Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 13/101 (12%)

Query: 472 PAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLP 531
           P+P     GT +     P P   PG+    PP PP P   G    P      PG  G+ P
Sbjct: 664 PSPSSLPGGTAI-----PPPPPLPGSARIPPPPPPLP---GSAGIPPPPPPLPGEAGMPP 715

Query: 532 PVSSGKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPP 572
           P           GP  P  P  P    +P  P    +P PP
Sbjct: 716 PPPP-----LPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPP 751



 Score = 33.9 bits (76), Expect = 0.47
 Identities = 30/87 (34%), Positives = 32/87 (36%), Gaps = 10/87 (11%)

Query: 491 PEAGPGADTRKPP-----RPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGP 545
           P   PG  T  PP      PP PL  G       S   PG   + PP            P
Sbjct: 598 PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPS--LPGGTAISPPPPLSGDATIPPPP 655

Query: 546 ARPENPEIPAPQHLP---AIPGDPTLP 569
             PE   IP+P  LP   AIP  P LP
Sbjct: 656 PLPEGVGIPSPSSLPGGTAIPPPPPLP 682


>gi|157785548 PAS domain containing 1 [Homo sapiens]
          Length = 773

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 6/72 (8%)

Query: 109 QEKLLQNQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCLLQLA 168
           Q++ L+ Q+Q+L ++ K QK++   EK+ L+E+ +Q  + LQE     Q  QK   LQ  
Sbjct: 492 QQRQLREQLQQLREQRKVQKQKKMQEKKKLQEQKMQEKKKLQE-----QRRQKKKKLQ-E 545

Query: 169 RSSWVGRMLRSQ 180
           R  W G+ML+ +
Sbjct: 546 RKKWQGQMLQKE 557



 Score = 30.0 bits (66), Expect = 6.8
 Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 41  PHPTPVVCSADPQLALESLDPRTLR---LLWRQRELEIQALRWAIQNGEDARLCHILEEV 97
           PHP  V C     L+    +   L+   + + Q++L  Q      Q  +       L E 
Sbjct: 447 PHPKDVKCFCGLSLSNSLKNTGELQEPCVAFNQQQLVQQEQHLKEQQRQLREQLQQLREQ 506

Query: 98  AGLPPKRSSHSQEKLLQNQVQ--KLIQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAE 155
             +  ++    ++KL + ++Q  K +QE + QK++   E++  + ++LQ     ++ + +
Sbjct: 507 RKVQKQKKMQEKKKLQEQKMQEKKKLQEQRRQKKKKLQERKKWQGQMLQKEPEEEQQKQQ 566

Query: 156 LQ 157
           LQ
Sbjct: 567 LQ 568


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 92/359 (25%), Positives = 124/359 (34%), Gaps = 108/359 (30%)

Query: 233 PSSKQKQPRPWPQLDTGSPES---SGKHSERHHKTVEWGSLPCL---NTSSSGGADSDSS 286
           PSS+   PRP     +G P+    S + S      ++  SLP L   NT+SS G    SS
Sbjct: 116 PSSRAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSS 175

Query: 287 SCRPGLPSFVQVIGHPPRDHRASSEQALV-----QAGSYSRDSE----DLQKTHSPRHGE 337
           +  P           PP   RA++    +     +A +Y+R+        Q+ H  R G 
Sbjct: 176 APPP-----------PPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGP 224

Query: 338 PVLSPQPCTDPDHWSPELLQSPTGLKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVR 397
           P  +P P   P         SP  ++               PS +S A            
Sbjct: 225 P--APPPVKPPP--------SPVNIRT-------------GPSGQSLAP----------- 250

Query: 398 GFPERLYRFPPGTLLAPRHHVTVWGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPK 457
             P   YR PPG    P                   +S + E  P L  R  +    +P 
Sbjct: 251 --PPPPYRQPPGVPNGP-------------------SSPTNESAPELPQRHNSLHRKTP- 288

Query: 458 GEVLSEHRIPRRETPAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREP 517
           G V       R   P P   A  + LS +R P P   P +    PP PP  +R       
Sbjct: 289 GPV-------RGLAPPPPTSASPSLLS-NRPPPPARDPPSRGAAPPPPPPVIRN------ 334

Query: 518 RVSRRRPGTRGLLPPVSSGKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAG 576
                  G R   PP    ++ H  E P+R + P  P P   PA  G P  P PP   G
Sbjct: 335 -------GARDAPPPPPPYRM-HGSEPPSRGKPP--PPPSRTPA--GPPPPPPPPLRNG 381


>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
           sapiens]
          Length = 631

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 12/100 (12%)

Query: 69  RQRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQNQVQKLIQ--ELKE 126
           RQR  E++ ++  +Q          LE  A    +    +Q +LL+ + +KL Q  +LKE
Sbjct: 425 RQRIKELEEMQQRLQEALQ------LEVKARRDEESVRIAQTRLLEEEEEKLKQLMQLKE 478

Query: 127 QKER----AQWEKEHLEERLLQTTRTLQEMEAELQNLQKS 162
           ++ER    AQ EKE L++ + Q +R+LQ+ + +L+ ++++
Sbjct: 479 EQERYIERAQQEKEELQQEMAQQSRSLQQAQQQLEEVRQN 518



 Score = 33.1 bits (74), Expect = 0.80
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 11/115 (9%)

Query: 103 KRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQEME----AELQN 158
           +R +  +E+LL+      +Q+L+E+KER   E E L+E   Q  R LQE E    ++ + 
Sbjct: 338 RRRAAKEEELLR------LQQLQEEKERKLQELELLQEAQRQAERLLQEEEERRRSQHRE 391

Query: 159 LQKSCLLQLARSSWVGRMLRSQTGSVEVVTAETLMDPSDLSENIQAPTGEGFRLE 213
           LQ++   QL  +      ++++    E   A       +L E +Q    E  +LE
Sbjct: 392 LQQALEGQLREAEQARASMQAEMELKEEEAARQRQRIKEL-EEMQQRLQEALQLE 445


>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
          Length = 288

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 14/89 (15%)

Query: 485 IDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREG 544
           ++R+PLP A P   +R PP+  + L  G    P  +         +P   SG        
Sbjct: 15  LERWPLPAAPP---SRTPPQTLKHLPSGEPGPPFPAG--------MPGGGSGSDTKGGGS 63

Query: 545 PARPENPEIPAPQHLPAIPGDPTLPSPPA 573
           PA PE+P  PA    PA P DP +P+ PA
Sbjct: 64  PATPEDPRSPAK---PAAPEDPQMPAQPA 89


>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
          Length = 288

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 14/89 (15%)

Query: 485 IDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREG 544
           ++R+PLP A P   +R PP+  + L  G    P  +         +P   SG        
Sbjct: 15  LERWPLPAAPP---SRTPPQTLKHLPSGEPGPPFPAG--------MPGGGSGSDTKGGGS 63

Query: 545 PARPENPEIPAPQHLPAIPGDPTLPSPPA 573
           PA PE+P  PA    PA P DP +P+ PA
Sbjct: 64  PATPEDPRSPAK---PAAPEDPQMPAQPA 89


>gi|157738667 FYVE and coiled-coil domain containing 1 [Homo
           sapiens]
          Length = 1478

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 13/106 (12%)

Query: 69  RQRELEIQALRWAIQNGEDAR--LCHILEEVAGLPPKRSSHSQEK-LLQNQVQKLIQ--- 122
           RQ+  +++ L   +Q  EDAR  L  +++E+A L  + S   QE   L  ++Q+L+    
Sbjct: 422 RQQSAQLEQLVKELQLKEDARASLERLVKEMAPLQEELSGKGQEADQLWRRLQELLAHTS 481

Query: 123 -------ELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQK 161
                  EL+ +K++ Q EKE LE+ +   TR LQ +E +L  + +
Sbjct: 482 SWEEELAELRREKKQQQEEKELLEQEVRSLTRQLQFLETQLAQVSQ 527


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 493 AGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPENPE 552
           A P  D ++PP PP PL       PR S   P     LP V+S         P  P++P 
Sbjct: 280 ASPAQDAQEPPAPPPPLPPYASCSPRASLPAPP----LPGVNSSS---ETPPPLPPKSPS 332

Query: 553 IPAPQHLPAIPGDPTLPSPPAEAG 576
             AP   P   G   LP+PPA  G
Sbjct: 333 FQAP---PQKAGAQALPAPPAPPG 353



 Score = 35.8 bits (81), Expect = 0.12
 Identities = 40/146 (27%), Positives = 50/146 (34%), Gaps = 24/146 (16%)

Query: 422 GEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPK----GEVLSEHRIPRRETPAPRVF 477
           G+   +  K  +   SR P P L  +  +  L+ P     G     H   R   P P V 
Sbjct: 113 GQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVP 172

Query: 478 ADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGK 537
           A          P P   P      PP PP       ++ P VS   P T+G LP V    
Sbjct: 173 APPP-------PTPPPPP------PPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVV---- 215

Query: 538 LFHAREGPARPENPEIPAPQHLPAIP 563
              A   P  P  P  P P   P +P
Sbjct: 216 ---APPVPCAPPPPPPPPPPTPPPLP 238



 Score = 33.1 bits (74), Expect = 0.80
 Identities = 38/160 (23%), Positives = 54/160 (33%), Gaps = 22/160 (13%)

Query: 407 PPGTLLAPRHHVTVWGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRI 466
           PP ++L+ +        A +    PL       P+PLL   G   L   P          
Sbjct: 238 PPASVLSDK--------AVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEP 289

Query: 467 PRRETPAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPR------PLRKGRVREPRVS 520
           P    P P   +     S+   PLP     ++T  PP PP+      P +K   +     
Sbjct: 290 PAPPPPLPPYASCSPRASLPAPPLPGVNSSSET-PPPLPPKSPSFQAPPQKAGAQALPAP 348

Query: 521 RRRPGTRGLL-------PPVSSGKLFHAREGPARPENPEI 553
              PG++  L       P    GKL      PAR    E+
Sbjct: 349 PAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARSPTTEL 388


>gi|7662176 ProSAPiP1 protein [Homo sapiens]
          Length = 673

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)

Query: 18  GHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLDPRTLRLLWRQRELEIQA 77
           GHLG   G         C P +            P   ++ L+ R    LW ++E E+ A
Sbjct: 295 GHLGSGEGGGGGLPFAACSPPS------------PSALIQELEER----LW-EKEQEVAA 337

Query: 78  LRWAIQNGEDARLCHILEE--------VAGLPPKRSSHSQEKLLQNQVQKLIQELKEQKE 129
           LR +++  E A +  +LEE        +A L    S   Q+  +  + Q+  Q L+ Q  
Sbjct: 338 LRRSLEQSE-AAVAQVLEERQKAWERELAELRQGCSGKLQQ--VARRAQRAQQGLQLQVL 394

Query: 130 RAQWEKEHLEE---RLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRMLRSQTGSVEV 186
           R Q +K+ L+E   RL++    L++  A  Q  Q   L ++  + W    +  + G + +
Sbjct: 395 RLQQDKKQLQEEAARLMRQREELEDKVAACQKEQADFLPRIEETKW---EVCQKAGEISL 451

Query: 187 VTAETLMDPSDLSENIQAPTG 207
           +  +     +D+S+ +    G
Sbjct: 452 LKQQLKDSQADVSQKLSEIVG 472


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 58/239 (24%), Positives = 82/239 (34%), Gaps = 36/239 (15%)

Query: 333 PRHGEPVLSPQ---PCTDPDHWSPELLQSPTGLKIVAVSCREKFVRIFNPSQESTADLSG 389
           P+    V+SP+   P   P+   P  + SP   K V V   +K   + +P  +  A +S 
Sbjct: 156 PQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSP 215

Query: 390 MVLKQ-LVRGFPERLYRFPPGTLLAPRHHVTVWGEATRSAKKPLRASSSREPVPLLSIRG 448
             +K  L    P++   FP    L P    +       ++ +P   S +  P    S R 
Sbjct: 216 ESVKATLSNPKPQKQSHFPE--TLGPPSASSPESPVLAASPEPWGPSPAASPESRKSAR- 272

Query: 449 CATLLLSPKGEVLSEHRIPRRETPAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRP 508
                 SP+    S    P    P P V  +       R P P   PG+    PP  PRP
Sbjct: 273 ----TTSPEPRKPSPSESPEPWKPFPAVSPE------PRRPAPAVSPGSWKPGPPGSPRP 322

Query: 509 LRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPENPEIPAPQHLPAIPGDPT 567
            +                    P  SSG    A+  P+    P  P P   P  P  PT
Sbjct: 323 WKSN------------------PSASSGPWKPAKPAPSVSPGPWKPIPSVSPG-PWKPT 362


>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
          Length = 684

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 48/162 (29%), Positives = 56/162 (34%), Gaps = 33/162 (20%)

Query: 447 RGCATLLLSPK-GEVLSEHRIPRRETPAP--------RVFADGTDLSIDRFPLPEAGPGA 497
           R CA LLL    GE+L+     R   P P        +   DG D       LP  GP  
Sbjct: 5   RACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLP--GPPG 62

Query: 498 DTRKPPRPPRPLRKGRVREPRVS-----------RRRPGTRGLL----PPVSSGKLFHAR 542
               P +P +P   G    P V            +  PG RG L    PP   GK     
Sbjct: 63  PKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGP 122

Query: 543 EGPARPENPE-------IPAPQHLPAIPGDPTLPSPPAEAGL 577
            G A    P         P P  LP +PG P  P PP   G+
Sbjct: 123 PGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGV 164


>gi|215599324 coiled-coil domain containing 114 isoform 2 [Homo
           sapiens]
          Length = 670

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%)

Query: 46  VVCSADPQLALESLDPRTLRLLWRQRELEIQALRWA---IQNGEDARLCHILEEVA---- 98
           V+C  D    L  L   +   L  Q+ LEI+   +A     N ++  L H+ EE+     
Sbjct: 264 VLCYEDALNKLSQLMGESDPDLLVQKYLEIEERNFAEFNFINEQNLELEHVQEEIKEMQE 323

Query: 99  GLPPKRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQN 158
            L   R+S   + LLQ Q QK++Q   ++ ++   E E LE R       L++++A++Q 
Sbjct: 324 ALVSARASKDDQHLLQEQQQKVLQ---QRMDKVHSEAERLEARFQDVRGQLEKLKADIQL 380

Query: 159 L 159
           L
Sbjct: 381 L 381


>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
          Length = 749

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 45/170 (26%), Positives = 66/170 (38%), Gaps = 31/170 (18%)

Query: 24  AGAPAAPETPTCLPDTTPHPTPVVCSA------------------DPQLALESLDPRTLR 65
           A APA+   P   P   P PTP + SA                  DP+ A   L  +  R
Sbjct: 430 APAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDPEEATRLLAEKR-R 488

Query: 66  LLWRQRE-----------LEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQ 114
           L   QRE           LE Q      Q   + R     EE   L  +++   +E+L +
Sbjct: 489 LAREQREKEERERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQR 548

Query: 115 NQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCL 164
              ++ ++E +E+ ERAQ +KE       +  R  QE E   Q  ++  L
Sbjct: 549 QAEERALRE-REEAERAQRQKEEEARVREEAERVRQEREKHFQREEQERL 597


>gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens]
          Length = 410

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 11/84 (13%)

Query: 491 PEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPEN 550
           P+ GP  DT +   P R    G   +PR SR R G RGL    +      A  GPA  E 
Sbjct: 85  PDRGPRRDTHRDAGP-RAGEHGVWEKPRQSRTRDGARGLTWDAA------APPGPAPWEA 137

Query: 551 PEIPAPQHLPAIPGDPTLPSPPAE 574
           PE P PQ      GDP    P +E
Sbjct: 138 PEPPQPQR----KGDPGRRRPESE 157


>gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens]
          Length = 401

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 11/84 (13%)

Query: 491 PEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPEN 550
           P+ GP  DT +   P R    G   +PR SR R G RGL    +      A  GPA  E 
Sbjct: 85  PDRGPRRDTHRDAGP-RAGEHGVWEKPRQSRTRDGARGLTWDAA------APPGPAPWEA 137

Query: 551 PEIPAPQHLPAIPGDPTLPSPPAE 574
           PE P PQ      GDP    P +E
Sbjct: 138 PEPPQPQR----KGDPGRRRPESE 157


>gi|236459851 ubinuclein 2 [Homo sapiens]
          Length = 1347

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 38/122 (31%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 488 FPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPAR 547
           +P PE  P      P   P+P R+    EP  + R P  R    P S  K    RE  +R
Sbjct: 22  YPGPEREPEYPREPPRLEPQPYREPARAEP-PAPREPAPRSDAQPPSREKPLPQRE-VSR 79

Query: 548 PENP-----EIPAPQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHRVR---VCRKSVDR 599
            E P     E P P+  P  P  P  P PP E+    E         VR   V +   D 
Sbjct: 80  AEPPMSLQREPPRPEPPPPFPPLPLQPPPPRESASRAEQPPRPPRETVRLELVLKDPTDE 139

Query: 600 SC 601
           SC
Sbjct: 140 SC 141


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 18/104 (17%)

Query: 493 AGPGA--DTRKPPRPPRPLRKG--RVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARP 548
           +GP A    R P  P +P  KG   +R P+V+  R      L P+SS  L  A   P+ P
Sbjct: 246 SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL--ATPSPSAP 303

Query: 549 ENPEIPAPQHLPAIPGDPTLPSPPA----EAGLGLEDCRLQKEH 588
            +P  P        P   TLPSPPA    +A   L    LQ  H
Sbjct: 304 PSPSAP--------PSLQTLPSPPATPPSQATTSLGSPTLQATH 339


>gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 432

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 16/164 (9%)

Query: 27  PAAPETPTCLPDTTPHPTPVVCSADPQLALESLDPRTLRLLWRQRELEIQALRWAIQNGE 86
           PA P     L D T H    + S   QL  E  + + L LL R++E  ++     ++  E
Sbjct: 153 PAGPSKVEQLQDETNHLRKELESVGRQLQAEVENNQMLSLLNRRQEERLREQEERLREQE 212

Query: 87  DA------RLCH----ILEEVAGLPPKRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKE 136
           +       RLC     + E+   L  +     QE+LL+   + L QE +++++    E+E
Sbjct: 213 ERLHEQEERLCEQEERLCEQEERLCEQEKLPGQERLLEEVEKLLEQERRQEEQERLLERE 272

Query: 137 HL---EERLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRML 177
            L    E LL+  R  Q+ E   +  Q+  L +L R   + RML
Sbjct: 273 RLLDEVEELLEQERLRQQDE---RLWQQETLRELERLRELERML 313


>gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 629

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 23/99 (23%)

Query: 465 RIPRRETPAPRVFADGTDLSIDRFPLPEAGPGADTR--KPPRPPRPLRKGRVREPRVSRR 522
           R+  R  PAP V      L        +AGP A T    PPRP RP+ K R R P    R
Sbjct: 435 RLEPRGPPAPEVVKQPVYLP------SKAGPKAQTACLPPPRPQRPVTKAR-RPPPQPHR 487

Query: 523 RPGTRGLLPPVSSGKLFHAREGPARPENP-EIPAPQHLP 560
           R  T+  LP             P RP+ P E   P+ +P
Sbjct: 488 RAETKARLP-------------PPRPQRPAETKVPEEIP 513


>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 878

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 23/99 (23%)

Query: 465 RIPRRETPAPRVFADGTDLSIDRFPLPEAGPGADTR--KPPRPPRPLRKGRVREPRVSRR 522
           R+  R  PAP V      L        +AGP A T    PPRP RP+ K R R P    R
Sbjct: 435 RLEPRGPPAPEVVKQPVYLP------SKAGPKAQTACLPPPRPQRPVTKAR-RPPPQPHR 487

Query: 523 RPGTRGLLPPVSSGKLFHAREGPARPENP-EIPAPQHLP 560
           R  T+  LP             P RP+ P E   P+ +P
Sbjct: 488 RAETKARLP-------------PPRPQRPAETKVPEEIP 513


>gi|166295204 hypothetical protein LOC80127 [Homo sapiens]
          Length = 529

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 91  CHILEEVAGLPPKRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQ 150
           C + +++  +        QEK   N ++KL Q+L E KE+AQ EK+ LE++    TR + 
Sbjct: 72  CKMEKDIMSVLSYLKKQDQEK--DNMIEKLKQQLNETKEKAQEEKDKLEQKY---TRQIN 126

Query: 151 EMEAELQNLQK 161
           E+E +     K
Sbjct: 127 ELEGQFHQKAK 137


>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
           A precursor [Homo sapiens]
          Length = 134

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 16/86 (18%)

Query: 487 RFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPA 546
           RFP P + P    R PP PP P   GR++          +  L PP   G      + P+
Sbjct: 62  RFPPPLSPPYGPGRIPPSPPPPYGPGRIQ----------SHSLPPPYGPG----YPQPPS 107

Query: 547 RPENPEIPAPQHLPA-IPGDPTLPSP 571
           +P  P  P P   P   P DP LP+P
Sbjct: 108 QP-RPYPPGPPFFPVNSPTDPALPTP 132


>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
           sapiens]
          Length = 430

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 25/155 (16%)

Query: 94  LEEVAGLPPKRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKEHL--EERLLQTTRTLQE 151
           LE VAG    +  ++Q   L N+ QK  + L+EQ+ER Q ++E L  +E  LQ     Q 
Sbjct: 110 LERVAGALQAQVEYNQRISLLNEGQK--ERLREQEERLQEQQERLREQEERLQQLAEPQN 167

Query: 152 MEAELQNLQKSCLLQLARSSWVGRMLRSQTGSVEVVTAETLMDPSDLSENIQAPTGEGFR 211
              EL N  KS +LQL +     + L+ + G   +  A           ++ A  GEG  
Sbjct: 168 SFKELNNENKS-VLQLEQQV---KELQEKLGKERLEAASQQKQQLTAQLSLMALPGEGHG 223

Query: 212 LEDVDWNSVARRYPNLFTNMEPSSKQKQPRPWPQL 246
            E +D                 S  ++ PRP P +
Sbjct: 224 GEHLD-----------------SEGEEAPRPMPSV 241


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 489 PLPEAGPGADTRKPPRPPRP-----LRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHARE 543
           P P  GPG     PP+PP P       KGRVR    ++  P   G      S +     +
Sbjct: 480 PCPSPGPGHTL--PPKPPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEK 537

Query: 544 GPARPENPEIPAPQHLPAIPGDPTLPSPPAE 574
             A P +P  P+P   P  P  P    PPAE
Sbjct: 538 ESAAPASP-APSPAPSPT-PAPPQKEQPPAE 566



 Score = 34.3 bits (77), Expect = 0.36
 Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 37/205 (18%)

Query: 9   RRREQESVSGHLGPPAGAPA-----AP--------ETPT--CLPDTTPHPTPVVCSADPQ 53
           RR   E  S     PA +PA     AP        ETPT   +  + P P P V  + P 
Sbjct: 531 RRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPM 590

Query: 54  LALESLDPRTLRLLWR------QRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSH 107
                 +  T  L  +      QRE E Q  R  +Q   D R+    E++A     R+  
Sbjct: 591 AGTTDREEATRLLAEKRRQAREQREREEQERR--LQAERDKRMRE--EQLAREAEARAER 646

Query: 108 SQE--KLLQNQVQKLIQELKEQKERAQWEKEHLEER--------LLQTTRTLQEMEAELQ 157
             E  +  + + ++  Q  +E++ER Q +KE  E R         L+  +  Q+ E E Q
Sbjct: 647 EAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQQEQERQ 706

Query: 158 NLQKSC--LLQLARSSWVGRMLRSQ 180
             +K    +++  R S V    + Q
Sbjct: 707 ERRKRLEEIMKRTRKSEVSETKQKQ 731



 Score = 33.9 bits (76), Expect = 0.47
 Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 14/181 (7%)

Query: 12  EQESVSGHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLDPRTLRLLWRQR 71
           E ES SG +GP   AP   E+P+    +     P +   D +    S  P    +     
Sbjct: 67  EPESPSGQVGPRP-APPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDS 125

Query: 72  ELEIQALRWAIQNGEDARLCHILEEVAG--LPPKRSS--HSQEK---LLQNQVQKLIQEL 124
               Q ++ A   GE  +L     E     L  K++     +EK   L + Q+Q+  + L
Sbjct: 126 PPTKQEVKKA---GERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRL 182

Query: 125 KEQKERAQWEKEHLEERLLQ-TTRTLQEMEAELQNLQKSCLLQL--ARSSWVGRMLRSQT 181
           +EQ+ +A+  +  LEER  Q   +  +  EA +Q   K    ++   R SW G +  S  
Sbjct: 183 EEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSP 242

Query: 182 G 182
           G
Sbjct: 243 G 243


>gi|110815800 WD repeat domain 32 [Homo sapiens]
          Length = 559

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 33/95 (34%), Positives = 38/95 (40%), Gaps = 25/95 (26%)

Query: 495 PGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPENPEIP 554
           PGAD   PP P R            S RRPG   L P   SG+L      P  PE+    
Sbjct: 40  PGADATHPPPPAR------------SPRRPGAPSLSPAPRSGEL----GLPGAPESSTAS 83

Query: 555 APQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHR 589
           A       PG+P+ PSPP        DCR +   R
Sbjct: 84  A-------PGEPSPPSPPCRR--PGPDCRAKSRGR 109


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,867,014
Number of Sequences: 37866
Number of extensions: 1934746
Number of successful extensions: 16677
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 731
Number of HSP's that attempted gapping in prelim test: 13049
Number of HSP's gapped (non-prelim): 4150
length of query: 634
length of database: 18,247,518
effective HSP length: 108
effective length of query: 526
effective length of database: 14,157,990
effective search space: 7447102740
effective search space used: 7447102740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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