BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|27734829 hypothetical protein LOC256329 [Homo sapiens] (634 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|27734829 hypothetical protein LOC256329 [Homo sapiens] 1298 0.0 gi|224593273 intermediate filament tail domain containing 1 isof... 49 2e-05 gi|224593271 intermediate filament tail domain containing 1 isof... 49 2e-05 gi|224593268 intermediate filament tail domain containing 1 isof... 49 2e-05 gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 46 9e-05 gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 46 9e-05 gi|157785548 PAS domain containing 1 [Homo sapiens] 44 5e-04 gi|18959210 WIRE protein [Homo sapiens] 44 5e-04 gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 42 0.001 gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] 42 0.002 gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] 42 0.002 gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapi... 42 0.002 gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 42 0.002 gi|7662176 ProSAPiP1 protein [Homo sapiens] 41 0.004 gi|41281612 zinc finger protein 828 [Homo sapiens] 41 0.004 gi|119508426 alpha 3 type IX collagen [Homo sapiens] 40 0.005 gi|215599324 coiled-coil domain containing 114 isoform 2 [Homo s... 40 0.005 gi|4505101 microtubule-associated protein 7 [Homo sapiens] 40 0.005 gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens] 40 0.005 gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens] 40 0.005 gi|236459851 ubinuclein 2 [Homo sapiens] 40 0.007 gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.007 gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sap... 40 0.007 gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap... 40 0.007 gi|239744140 PREDICTED: hypothetical protein [Homo sapiens] 40 0.007 gi|166295204 hypothetical protein LOC80127 [Homo sapiens] 40 0.007 gi|59806357 submaxillary gland androgen regulated protein 3 homo... 40 0.007 gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap... 40 0.007 gi|78042577 MAP7 domain containing 1 [Homo sapiens] 40 0.007 gi|110815800 WD repeat domain 32 [Homo sapiens] 40 0.009 >gi|27734829 hypothetical protein LOC256329 [Homo sapiens] Length = 634 Score = 1298 bits (3359), Expect = 0.0 Identities = 634/634 (100%), Positives = 634/634 (100%) Query: 1 MRWLRPAGRRREQESVSGHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLD 60 MRWLRPAGRRREQESVSGHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLD Sbjct: 1 MRWLRPAGRRREQESVSGHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLD 60 Query: 61 PRTLRLLWRQRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQNQVQKL 120 PRTLRLLWRQRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQNQVQKL Sbjct: 61 PRTLRLLWRQRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQNQVQKL 120 Query: 121 IQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRMLRSQ 180 IQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRMLRSQ Sbjct: 121 IQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRMLRSQ 180 Query: 181 TGSVEVVTAETLMDPSDLSENIQAPTGEGFRLEDVDWNSVARRYPNLFTNMEPSSKQKQP 240 TGSVEVVTAETLMDPSDLSENIQAPTGEGFRLEDVDWNSVARRYPNLFTNMEPSSKQKQP Sbjct: 181 TGSVEVVTAETLMDPSDLSENIQAPTGEGFRLEDVDWNSVARRYPNLFTNMEPSSKQKQP 240 Query: 241 RPWPQLDTGSPESSGKHSERHHKTVEWGSLPCLNTSSSGGADSDSSSCRPGLPSFVQVIG 300 RPWPQLDTGSPESSGKHSERHHKTVEWGSLPCLNTSSSGGADSDSSSCRPGLPSFVQVIG Sbjct: 241 RPWPQLDTGSPESSGKHSERHHKTVEWGSLPCLNTSSSGGADSDSSSCRPGLPSFVQVIG 300 Query: 301 HPPRDHRASSEQALVQAGSYSRDSEDLQKTHSPRHGEPVLSPQPCTDPDHWSPELLQSPT 360 HPPRDHRASSEQALVQAGSYSRDSEDLQKTHSPRHGEPVLSPQPCTDPDHWSPELLQSPT Sbjct: 301 HPPRDHRASSEQALVQAGSYSRDSEDLQKTHSPRHGEPVLSPQPCTDPDHWSPELLQSPT 360 Query: 361 GLKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTV 420 GLKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTV Sbjct: 361 GLKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTV 420 Query: 421 WGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRIPRRETPAPRVFADG 480 WGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRIPRRETPAPRVFADG Sbjct: 421 WGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRIPRRETPAPRVFADG 480 Query: 481 TDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFH 540 TDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFH Sbjct: 481 TDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFH 540 Query: 541 AREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHRVRVCRKSVDRS 600 AREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHRVRVCRKSVDRS Sbjct: 541 AREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHRVRVCRKSVDRS 600 Query: 601 CPLVALSVQNTAESRFGFRFLSCLPVTADTCRGA 634 CPLVALSVQNTAESRFGFRFLSCLPVTADTCRGA Sbjct: 601 CPLVALSVQNTAESRFGFRFLSCLPVTADTCRGA 634 >gi|224593273 intermediate filament tail domain containing 1 isoform 1 [Homo sapiens] Length = 409 Score = 48.5 bits (114), Expect = 2e-05 Identities = 27/101 (26%), Positives = 48/101 (47%) Query: 362 LKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTVW 421 ++I V+ + FV++ N S + + +L+Q V G LYRF P ++ VTVW Sbjct: 169 VEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVW 228 Query: 422 GEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLS 462 A+ + +P +E + C T+L P G+ ++ Sbjct: 229 AAASEAKHQPPSDFLWKEQDKFRASPDCITILCKPNGQAIA 269 >gi|224593271 intermediate filament tail domain containing 1 isoform 3 [Homo sapiens] Length = 325 Score = 48.5 bits (114), Expect = 2e-05 Identities = 27/101 (26%), Positives = 48/101 (47%) Query: 362 LKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTVW 421 ++I V+ + FV++ N S + + +L+Q V G LYRF P ++ VTVW Sbjct: 85 VEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVW 144 Query: 422 GEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLS 462 A+ + +P +E + C T+L P G+ ++ Sbjct: 145 AAASEAKHQPPSDFLWKEQDKFRASPDCITILCKPNGQAIA 185 >gi|224593268 intermediate filament tail domain containing 1 isoform 2 [Homo sapiens] Length = 388 Score = 48.5 bits (114), Expect = 2e-05 Identities = 27/101 (26%), Positives = 48/101 (47%) Query: 362 LKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVRGFPERLYRFPPGTLLAPRHHVTVW 421 ++I V+ + FV++ N S + + +L+Q V G LYRF P ++ VTVW Sbjct: 148 VEIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVW 207 Query: 422 GEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLS 462 A+ + +P +E + C T+L P G+ ++ Sbjct: 208 AAASEAKHQPPSDFLWKEQDKFRASPDCITILCKPNGQAIA 248 >gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] Length = 1263 Score = 46.2 bits (108), Expect = 9e-05 Identities = 36/108 (33%), Positives = 44/108 (40%), Gaps = 14/108 (12%) Query: 472 PAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLP 531 P P +G + P P + PG T PP PP P G R P PG+ G+ P Sbjct: 643 PPPPPLPEGVGI-----PSPSSLPGG-TAIPPPPPLP---GSARIPPPPPPLPGSAGIPP 693 Query: 532 PVSS--GKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGL 577 P G+ P P P IP P P PG P +P PP G+ Sbjct: 694 PPPPLPGEAGMPPPPPPLPGGPGIPPP---PPFPGGPGIPPPPPGMGM 738 Score = 37.0 bits (84), Expect = 0.056 Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 13/101 (12%) Query: 472 PAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLP 531 P+P GT + P P PG+ PP PP P G P PG G+ P Sbjct: 655 PSPSSLPGGTAI-----PPPPPLPGSARIPPPPPPLP---GSAGIPPPPPPLPGEAGMPP 706 Query: 532 PVSSGKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPP 572 P GP P P P +P P +P PP Sbjct: 707 PPPP-----LPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPP 742 Score = 33.9 bits (76), Expect = 0.47 Identities = 30/87 (34%), Positives = 32/87 (36%), Gaps = 10/87 (11%) Query: 491 PEAGPGADTRKPP-----RPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGP 545 P PG T PP PP PL G S PG + PP P Sbjct: 589 PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPS--LPGGTAISPPPPLSGDATIPPPP 646 Query: 546 ARPENPEIPAPQHLP---AIPGDPTLP 569 PE IP+P LP AIP P LP Sbjct: 647 PLPEGVGIPSPSSLPGGTAIPPPPPLP 673 >gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] Length = 1272 Score = 46.2 bits (108), Expect = 9e-05 Identities = 36/108 (33%), Positives = 44/108 (40%), Gaps = 14/108 (12%) Query: 472 PAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLP 531 P P +G + P P + PG T PP PP P G R P PG+ G+ P Sbjct: 652 PPPPPLPEGVGI-----PSPSSLPGG-TAIPPPPPLP---GSARIPPPPPPLPGSAGIPP 702 Query: 532 PVSS--GKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAGL 577 P G+ P P P IP P P PG P +P PP G+ Sbjct: 703 PPPPLPGEAGMPPPPPPLPGGPGIPPP---PPFPGGPGIPPPPPGMGM 747 Score = 37.0 bits (84), Expect = 0.056 Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 13/101 (12%) Query: 472 PAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLP 531 P+P GT + P P PG+ PP PP P G P PG G+ P Sbjct: 664 PSPSSLPGGTAI-----PPPPPLPGSARIPPPPPPLP---GSAGIPPPPPPLPGEAGMPP 715 Query: 532 PVSSGKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPP 572 P GP P P P +P P +P PP Sbjct: 716 PPPP-----LPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPP 751 Score = 33.9 bits (76), Expect = 0.47 Identities = 30/87 (34%), Positives = 32/87 (36%), Gaps = 10/87 (11%) Query: 491 PEAGPGADTRKPP-----RPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGP 545 P PG T PP PP PL G S PG + PP P Sbjct: 598 PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPS--LPGGTAISPPPPLSGDATIPPPP 655 Query: 546 ARPENPEIPAPQHLP---AIPGDPTLP 569 PE IP+P LP AIP P LP Sbjct: 656 PLPEGVGIPSPSSLPGGTAIPPPPPLP 682 >gi|157785548 PAS domain containing 1 [Homo sapiens] Length = 773 Score = 43.9 bits (102), Expect = 5e-04 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 6/72 (8%) Query: 109 QEKLLQNQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCLLQLA 168 Q++ L+ Q+Q+L ++ K QK++ EK+ L+E+ +Q + LQE Q QK LQ Sbjct: 492 QQRQLREQLQQLREQRKVQKQKKMQEKKKLQEQKMQEKKKLQE-----QRRQKKKKLQ-E 545 Query: 169 RSSWVGRMLRSQ 180 R W G+ML+ + Sbjct: 546 RKKWQGQMLQKE 557 Score = 30.0 bits (66), Expect = 6.8 Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 5/122 (4%) Query: 41 PHPTPVVCSADPQLALESLDPRTLR---LLWRQRELEIQALRWAIQNGEDARLCHILEEV 97 PHP V C L+ + L+ + + Q++L Q Q + L E Sbjct: 447 PHPKDVKCFCGLSLSNSLKNTGELQEPCVAFNQQQLVQQEQHLKEQQRQLREQLQQLREQ 506 Query: 98 AGLPPKRSSHSQEKLLQNQVQ--KLIQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAE 155 + ++ ++KL + ++Q K +QE + QK++ E++ + ++LQ ++ + + Sbjct: 507 RKVQKQKKMQEKKKLQEQKMQEKKKLQEQRRQKKKKLQERKKWQGQMLQKEPEEEQQKQQ 566 Query: 156 LQ 157 LQ Sbjct: 567 LQ 568 >gi|18959210 WIRE protein [Homo sapiens] Length = 440 Score = 43.9 bits (102), Expect = 5e-04 Identities = 92/359 (25%), Positives = 124/359 (34%), Gaps = 108/359 (30%) Query: 233 PSSKQKQPRPWPQLDTGSPES---SGKHSERHHKTVEWGSLPCL---NTSSSGGADSDSS 286 PSS+ PRP +G P+ S + S ++ SLP L NT+SS G SS Sbjct: 116 PSSRAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSLPDLSRPNTTSSTGMKHSSS 175 Query: 287 SCRPGLPSFVQVIGHPPRDHRASSEQALV-----QAGSYSRDSE----DLQKTHSPRHGE 337 + P PP RA++ + +A +Y+R+ Q+ H R G Sbjct: 176 APPP-----------PPPGRRANAPPTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGP 224 Query: 338 PVLSPQPCTDPDHWSPELLQSPTGLKIVAVSCREKFVRIFNPSQESTADLSGMVLKQLVR 397 P +P P P SP ++ PS +S A Sbjct: 225 P--APPPVKPPP--------SPVNIRT-------------GPSGQSLAP----------- 250 Query: 398 GFPERLYRFPPGTLLAPRHHVTVWGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPK 457 P YR PPG P +S + E P L R + +P Sbjct: 251 --PPPPYRQPPGVPNGP-------------------SSPTNESAPELPQRHNSLHRKTP- 288 Query: 458 GEVLSEHRIPRRETPAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREP 517 G V R P P A + LS +R P P P + PP PP +R Sbjct: 289 GPV-------RGLAPPPPTSASPSLLS-NRPPPPARDPPSRGAAPPPPPPVIRN------ 334 Query: 518 RVSRRRPGTRGLLPPVSSGKLFHAREGPARPENPEIPAPQHLPAIPGDPTLPSPPAEAG 576 G R PP ++ H E P+R + P P P PA G P P PP G Sbjct: 335 -------GARDAPPPPPPYRM-HGSEPPSRGKPP--PPPSRTPA--GPPPPPPPPLRNG 381 >gi|145312241 differentially expressed in FDCP 6 homolog [Homo sapiens] Length = 631 Score = 42.4 bits (98), Expect = 0.001 Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 12/100 (12%) Query: 69 RQRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQNQVQKLIQ--ELKE 126 RQR E++ ++ +Q LE A + +Q +LL+ + +KL Q +LKE Sbjct: 425 RQRIKELEEMQQRLQEALQ------LEVKARRDEESVRIAQTRLLEEEEEKLKQLMQLKE 478 Query: 127 QKER----AQWEKEHLEERLLQTTRTLQEMEAELQNLQKS 162 ++ER AQ EKE L++ + Q +R+LQ+ + +L+ ++++ Sbjct: 479 EQERYIERAQQEKEELQQEMAQQSRSLQQAQQQLEEVRQN 518 Score = 33.1 bits (74), Expect = 0.80 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 11/115 (9%) Query: 103 KRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQEME----AELQN 158 +R + +E+LL+ +Q+L+E+KER E E L+E Q R LQE E ++ + Sbjct: 338 RRRAAKEEELLR------LQQLQEEKERKLQELELLQEAQRQAERLLQEEEERRRSQHRE 391 Query: 159 LQKSCLLQLARSSWVGRMLRSQTGSVEVVTAETLMDPSDLSENIQAPTGEGFRLE 213 LQ++ QL + ++++ E A +L E +Q E +LE Sbjct: 392 LQQALEGQLREAEQARASMQAEMELKEEEAARQRQRIKEL-EEMQQRLQEALQLE 445 >gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] Length = 288 Score = 42.0 bits (97), Expect = 0.002 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 14/89 (15%) Query: 485 IDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREG 544 ++R+PLP A P +R PP+ + L G P + +P SG Sbjct: 15 LERWPLPAAPP---SRTPPQTLKHLPSGEPGPPFPAG--------MPGGGSGSDTKGGGS 63 Query: 545 PARPENPEIPAPQHLPAIPGDPTLPSPPA 573 PA PE+P PA PA P DP +P+ PA Sbjct: 64 PATPEDPRSPAK---PAAPEDPQMPAQPA 89 >gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] Length = 288 Score = 42.0 bits (97), Expect = 0.002 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 14/89 (15%) Query: 485 IDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREG 544 ++R+PLP A P +R PP+ + L G P + +P SG Sbjct: 15 LERWPLPAAPP---SRTPPQTLKHLPSGEPGPPFPAG--------MPGGGSGSDTKGGGS 63 Query: 545 PARPENPEIPAPQHLPAIPGDPTLPSPPA 573 PA PE+P PA PA P DP +P+ PA Sbjct: 64 PATPEDPRSPAK---PAAPEDPQMPAQPA 89 >gi|157738667 FYVE and coiled-coil domain containing 1 [Homo sapiens] Length = 1478 Score = 42.0 bits (97), Expect = 0.002 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 13/106 (12%) Query: 69 RQRELEIQALRWAIQNGEDAR--LCHILEEVAGLPPKRSSHSQEK-LLQNQVQKLIQ--- 122 RQ+ +++ L +Q EDAR L +++E+A L + S QE L ++Q+L+ Sbjct: 422 RQQSAQLEQLVKELQLKEDARASLERLVKEMAPLQEELSGKGQEADQLWRRLQELLAHTS 481 Query: 123 -------ELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQK 161 EL+ +K++ Q EKE LE+ + TR LQ +E +L + + Sbjct: 482 SWEEELAELRREKKQQQEEKELLEQEVRSLTRQLQFLETQLAQVSQ 527 >gi|122937496 WAS/WASL interacting protein family, member 3 [Homo sapiens] Length = 483 Score = 42.0 bits (97), Expect = 0.002 Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 10/84 (11%) Query: 493 AGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPENPE 552 A P D ++PP PP PL PR S P LP V+S P P++P Sbjct: 280 ASPAQDAQEPPAPPPPLPPYASCSPRASLPAPP----LPGVNSSS---ETPPPLPPKSPS 332 Query: 553 IPAPQHLPAIPGDPTLPSPPAEAG 576 AP P G LP+PPA G Sbjct: 333 FQAP---PQKAGAQALPAPPAPPG 353 Score = 35.8 bits (81), Expect = 0.12 Identities = 40/146 (27%), Positives = 50/146 (34%), Gaps = 24/146 (16%) Query: 422 GEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPK----GEVLSEHRIPRRETPAPRVF 477 G+ + K + SR P P L + + L+ P G H R P P V Sbjct: 113 GQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVP 172 Query: 478 ADGTDLSIDRFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGK 537 A P P P PP PP ++ P VS P T+G LP V Sbjct: 173 APPP-------PTPPPPP------PPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVV---- 215 Query: 538 LFHAREGPARPENPEIPAPQHLPAIP 563 A P P P P P P +P Sbjct: 216 ---APPVPCAPPPPPPPPPPTPPPLP 238 Score = 33.1 bits (74), Expect = 0.80 Identities = 38/160 (23%), Positives = 54/160 (33%), Gaps = 22/160 (13%) Query: 407 PPGTLLAPRHHVTVWGEATRSAKKPLRASSSREPVPLLSIRGCATLLLSPKGEVLSEHRI 466 PP ++L+ + A + PL P+PLL G L P Sbjct: 238 PPASVLSDK--------AVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEP 289 Query: 467 PRRETPAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPR------PLRKGRVREPRVS 520 P P P + S+ PLP ++T PP PP+ P +K + Sbjct: 290 PAPPPPLPPYASCSPRASLPAPPLPGVNSSSET-PPPLPPKSPSFQAPPQKAGAQALPAP 348 Query: 521 RRRPGTRGLL-------PPVSSGKLFHAREGPARPENPEI 553 PG++ L P GKL PAR E+ Sbjct: 349 PAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARSPTTEL 388 >gi|7662176 ProSAPiP1 protein [Homo sapiens] Length = 673 Score = 40.8 bits (94), Expect = 0.004 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%) Query: 18 GHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLDPRTLRLLWRQRELEIQA 77 GHLG G C P + P ++ L+ R LW ++E E+ A Sbjct: 295 GHLGSGEGGGGGLPFAACSPPS------------PSALIQELEER----LW-EKEQEVAA 337 Query: 78 LRWAIQNGEDARLCHILEE--------VAGLPPKRSSHSQEKLLQNQVQKLIQELKEQKE 129 LR +++ E A + +LEE +A L S Q+ + + Q+ Q L+ Q Sbjct: 338 LRRSLEQSE-AAVAQVLEERQKAWERELAELRQGCSGKLQQ--VARRAQRAQQGLQLQVL 394 Query: 130 RAQWEKEHLEE---RLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRMLRSQTGSVEV 186 R Q +K+ L+E RL++ L++ A Q Q L ++ + W + + G + + Sbjct: 395 RLQQDKKQLQEEAARLMRQREELEDKVAACQKEQADFLPRIEETKW---EVCQKAGEISL 451 Query: 187 VTAETLMDPSDLSENIQAPTG 207 + + +D+S+ + G Sbjct: 452 LKQQLKDSQADVSQKLSEIVG 472 >gi|41281612 zinc finger protein 828 [Homo sapiens] Length = 812 Score = 40.8 bits (94), Expect = 0.004 Identities = 58/239 (24%), Positives = 82/239 (34%), Gaps = 36/239 (15%) Query: 333 PRHGEPVLSPQ---PCTDPDHWSPELLQSPTGLKIVAVSCREKFVRIFNPSQESTADLSG 389 P+ V+SP+ P P+ P + SP K V V +K + +P + A +S Sbjct: 156 PQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSP 215 Query: 390 MVLKQ-LVRGFPERLYRFPPGTLLAPRHHVTVWGEATRSAKKPLRASSSREPVPLLSIRG 448 +K L P++ FP L P + ++ +P S + P S R Sbjct: 216 ESVKATLSNPKPQKQSHFPE--TLGPPSASSPESPVLAASPEPWGPSPAASPESRKSAR- 272 Query: 449 CATLLLSPKGEVLSEHRIPRRETPAPRVFADGTDLSIDRFPLPEAGPGADTRKPPRPPRP 508 SP+ S P P P V + R P P PG+ PP PRP Sbjct: 273 ----TTSPEPRKPSPSESPEPWKPFPAVSPE------PRRPAPAVSPGSWKPGPPGSPRP 322 Query: 509 LRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPENPEIPAPQHLPAIPGDPT 567 + P SSG A+ P+ P P P P P PT Sbjct: 323 WKSN------------------PSASSGPWKPAKPAPSVSPGPWKPIPSVSPG-PWKPT 362 >gi|119508426 alpha 3 type IX collagen [Homo sapiens] Length = 684 Score = 40.4 bits (93), Expect = 0.005 Identities = 48/162 (29%), Positives = 56/162 (34%), Gaps = 33/162 (20%) Query: 447 RGCATLLLSPK-GEVLSEHRIPRRETPAP--------RVFADGTDLSIDRFPLPEAGPGA 497 R CA LLL GE+L+ R P P + DG D LP GP Sbjct: 5 RACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLP--GPPG 62 Query: 498 DTRKPPRPPRPLRKGRVREPRVS-----------RRRPGTRGLL----PPVSSGKLFHAR 542 P +P +P G P V + PG RG L PP GK Sbjct: 63 PKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGP 122 Query: 543 EGPARPENPE-------IPAPQHLPAIPGDPTLPSPPAEAGL 577 G A P P P LP +PG P P PP G+ Sbjct: 123 PGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGV 164 >gi|215599324 coiled-coil domain containing 114 isoform 2 [Homo sapiens] Length = 670 Score = 40.4 bits (93), Expect = 0.005 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%) Query: 46 VVCSADPQLALESLDPRTLRLLWRQRELEIQALRWA---IQNGEDARLCHILEEVA---- 98 V+C D L L + L Q+ LEI+ +A N ++ L H+ EE+ Sbjct: 264 VLCYEDALNKLSQLMGESDPDLLVQKYLEIEERNFAEFNFINEQNLELEHVQEEIKEMQE 323 Query: 99 GLPPKRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQN 158 L R+S + LLQ Q QK++Q ++ ++ E E LE R L++++A++Q Sbjct: 324 ALVSARASKDDQHLLQEQQQKVLQ---QRMDKVHSEAERLEARFQDVRGQLEKLKADIQL 380 Query: 159 L 159 L Sbjct: 381 L 381 >gi|4505101 microtubule-associated protein 7 [Homo sapiens] Length = 749 Score = 40.4 bits (93), Expect = 0.005 Identities = 45/170 (26%), Positives = 66/170 (38%), Gaps = 31/170 (18%) Query: 24 AGAPAAPETPTCLPDTTPHPTPVVCSA------------------DPQLALESLDPRTLR 65 A APA+ P P P PTP + SA DP+ A L + R Sbjct: 430 APAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDPEEATRLLAEKR-R 488 Query: 66 LLWRQRE-----------LEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSHSQEKLLQ 114 L QRE LE Q Q + R EE L +++ +E+L + Sbjct: 489 LAREQREKEERERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQR 548 Query: 115 NQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQEMEAELQNLQKSCL 164 ++ ++E +E+ ERAQ +KE + R QE E Q ++ L Sbjct: 549 QAEERALRE-REEAERAQRQKEEEARVREEAERVRQEREKHFQREEQERL 597 >gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens] Length = 410 Score = 40.4 bits (93), Expect = 0.005 Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 11/84 (13%) Query: 491 PEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPEN 550 P+ GP DT + P R G +PR SR R G RGL + A GPA E Sbjct: 85 PDRGPRRDTHRDAGP-RAGEHGVWEKPRQSRTRDGARGLTWDAA------APPGPAPWEA 137 Query: 551 PEIPAPQHLPAIPGDPTLPSPPAE 574 PE P PQ GDP P +E Sbjct: 138 PEPPQPQR----KGDPGRRRPESE 157 >gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens] Length = 401 Score = 40.4 bits (93), Expect = 0.005 Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 11/84 (13%) Query: 491 PEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPEN 550 P+ GP DT + P R G +PR SR R G RGL + A GPA E Sbjct: 85 PDRGPRRDTHRDAGP-RAGEHGVWEKPRQSRTRDGARGLTWDAA------APPGPAPWEA 137 Query: 551 PEIPAPQHLPAIPGDPTLPSPPAE 574 PE P PQ GDP P +E Sbjct: 138 PEPPQPQR----KGDPGRRRPESE 157 >gi|236459851 ubinuclein 2 [Homo sapiens] Length = 1347 Score = 40.0 bits (92), Expect = 0.007 Identities = 38/122 (31%), Positives = 46/122 (37%), Gaps = 10/122 (8%) Query: 488 FPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPAR 547 +P PE P P P+P R+ EP + R P R P S K RE +R Sbjct: 22 YPGPEREPEYPREPPRLEPQPYREPARAEP-PAPREPAPRSDAQPPSREKPLPQRE-VSR 79 Query: 548 PENP-----EIPAPQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHRVR---VCRKSVDR 599 E P E P P+ P P P P PP E+ E VR V + D Sbjct: 80 AEPPMSLQREPPRPEPPPPFPPLPLQPPPPRESASRAEQPPRPPRETVRLELVLKDPTDE 139 Query: 600 SC 601 SC Sbjct: 140 SC 141 >gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens] Length = 816 Score = 40.0 bits (92), Expect = 0.007 Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 18/104 (17%) Query: 493 AGPGA--DTRKPPRPPRPLRKG--RVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARP 548 +GP A R P P +P KG +R P+V+ R L P+SS L A P+ P Sbjct: 246 SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL--ATPSPSAP 303 Query: 549 ENPEIPAPQHLPAIPGDPTLPSPPA----EAGLGLEDCRLQKEH 588 +P P P TLPSPPA +A L LQ H Sbjct: 304 PSPSAP--------PSLQTLPSPPATPPSQATTSLGSPTLQATH 339 >gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sapiens] Length = 432 Score = 40.0 bits (92), Expect = 0.007 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 16/164 (9%) Query: 27 PAAPETPTCLPDTTPHPTPVVCSADPQLALESLDPRTLRLLWRQRELEIQALRWAIQNGE 86 PA P L D T H + S QL E + + L LL R++E ++ ++ E Sbjct: 153 PAGPSKVEQLQDETNHLRKELESVGRQLQAEVENNQMLSLLNRRQEERLREQEERLREQE 212 Query: 87 DA------RLCH----ILEEVAGLPPKRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKE 136 + RLC + E+ L + QE+LL+ + L QE +++++ E+E Sbjct: 213 ERLHEQEERLCEQEERLCEQEERLCEQEKLPGQERLLEEVEKLLEQERRQEEQERLLERE 272 Query: 137 HL---EERLLQTTRTLQEMEAELQNLQKSCLLQLARSSWVGRML 177 L E LL+ R Q+ E + Q+ L +L R + RML Sbjct: 273 RLLDEVEELLEQERLRQQDE---RLWQQETLRELERLRELERML 313 >gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sapiens] Length = 629 Score = 40.0 bits (92), Expect = 0.007 Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 23/99 (23%) Query: 465 RIPRRETPAPRVFADGTDLSIDRFPLPEAGPGADTR--KPPRPPRPLRKGRVREPRVSRR 522 R+ R PAP V L +AGP A T PPRP RP+ K R R P R Sbjct: 435 RLEPRGPPAPEVVKQPVYLP------SKAGPKAQTACLPPPRPQRPVTKAR-RPPPQPHR 487 Query: 523 RPGTRGLLPPVSSGKLFHAREGPARPENP-EIPAPQHLP 560 R T+ LP P RP+ P E P+ +P Sbjct: 488 RAETKARLP-------------PPRPQRPAETKVPEEIP 513 >gi|239744140 PREDICTED: hypothetical protein [Homo sapiens] Length = 878 Score = 40.0 bits (92), Expect = 0.007 Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 23/99 (23%) Query: 465 RIPRRETPAPRVFADGTDLSIDRFPLPEAGPGADTR--KPPRPPRPLRKGRVREPRVSRR 522 R+ R PAP V L +AGP A T PPRP RP+ K R R P R Sbjct: 435 RLEPRGPPAPEVVKQPVYLP------SKAGPKAQTACLPPPRPQRPVTKAR-RPPPQPHR 487 Query: 523 RPGTRGLLPPVSSGKLFHAREGPARPENP-EIPAPQHLP 560 R T+ LP P RP+ P E P+ +P Sbjct: 488 RAETKARLP-------------PPRPQRPAETKVPEEIP 513 >gi|166295204 hypothetical protein LOC80127 [Homo sapiens] Length = 529 Score = 40.0 bits (92), Expect = 0.007 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%) Query: 91 CHILEEVAGLPPKRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKEHLEERLLQTTRTLQ 150 C + +++ + QEK N ++KL Q+L E KE+AQ EK+ LE++ TR + Sbjct: 72 CKMEKDIMSVLSYLKKQDQEK--DNMIEKLKQQLNETKEKAQEEKDKLEQKY---TRQIN 126 Query: 151 EMEAELQNLQK 161 E+E + K Sbjct: 127 ELEGQFHQKAK 137 >gi|59806357 submaxillary gland androgen regulated protein 3 homolog A precursor [Homo sapiens] Length = 134 Score = 40.0 bits (92), Expect = 0.007 Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 16/86 (18%) Query: 487 RFPLPEAGPGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPA 546 RFP P + P R PP PP P GR++ + L PP G + P+ Sbjct: 62 RFPPPLSPPYGPGRIPPSPPPPYGPGRIQ----------SHSLPPPYGPG----YPQPPS 107 Query: 547 RPENPEIPAPQHLPA-IPGDPTLPSP 571 +P P P P P P DP LP+P Sbjct: 108 QP-RPYPPGPPFFPVNSPTDPALPTP 132 >gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sapiens] Length = 430 Score = 40.0 bits (92), Expect = 0.007 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 25/155 (16%) Query: 94 LEEVAGLPPKRSSHSQEKLLQNQVQKLIQELKEQKERAQWEKEHL--EERLLQTTRTLQE 151 LE VAG + ++Q L N+ QK + L+EQ+ER Q ++E L +E LQ Q Sbjct: 110 LERVAGALQAQVEYNQRISLLNEGQK--ERLREQEERLQEQQERLREQEERLQQLAEPQN 167 Query: 152 MEAELQNLQKSCLLQLARSSWVGRMLRSQTGSVEVVTAETLMDPSDLSENIQAPTGEGFR 211 EL N KS +LQL + + L+ + G + A ++ A GEG Sbjct: 168 SFKELNNENKS-VLQLEQQV---KELQEKLGKERLEAASQQKQQLTAQLSLMALPGEGHG 223 Query: 212 LEDVDWNSVARRYPNLFTNMEPSSKQKQPRPWPQL 246 E +D S ++ PRP P + Sbjct: 224 GEHLD-----------------SEGEEAPRPMPSV 241 >gi|78042577 MAP7 domain containing 1 [Homo sapiens] Length = 841 Score = 40.0 bits (92), Expect = 0.007 Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 489 PLPEAGPGADTRKPPRPPRP-----LRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHARE 543 P P GPG PP+PP P KGRVR ++ P G S + + Sbjct: 480 PCPSPGPGHTL--PPKPPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEK 537 Query: 544 GPARPENPEIPAPQHLPAIPGDPTLPSPPAE 574 A P +P P+P P P P PPAE Sbjct: 538 ESAAPASP-APSPAPSPT-PAPPQKEQPPAE 566 Score = 34.3 bits (77), Expect = 0.36 Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 37/205 (18%) Query: 9 RRREQESVSGHLGPPAGAPA-----AP--------ETPT--CLPDTTPHPTPVVCSADPQ 53 RR E S PA +PA AP ETPT + + P P P V + P Sbjct: 531 RRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPM 590 Query: 54 LALESLDPRTLRLLWR------QRELEIQALRWAIQNGEDARLCHILEEVAGLPPKRSSH 107 + T L + QRE E Q R +Q D R+ E++A R+ Sbjct: 591 AGTTDREEATRLLAEKRRQAREQREREEQERR--LQAERDKRMRE--EQLAREAEARAER 646 Query: 108 SQE--KLLQNQVQKLIQELKEQKERAQWEKEHLEER--------LLQTTRTLQEMEAELQ 157 E + + + ++ Q +E++ER Q +KE E R L+ + Q+ E E Q Sbjct: 647 EAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQQEQERQ 706 Query: 158 NLQKSC--LLQLARSSWVGRMLRSQ 180 +K +++ R S V + Q Sbjct: 707 ERRKRLEEIMKRTRKSEVSETKQKQ 731 Score = 33.9 bits (76), Expect = 0.47 Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 14/181 (7%) Query: 12 EQESVSGHLGPPAGAPAAPETPTCLPDTTPHPTPVVCSADPQLALESLDPRTLRLLWRQR 71 E ES SG +GP AP E+P+ + P + D + S P + Sbjct: 67 EPESPSGQVGPRP-APPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDS 125 Query: 72 ELEIQALRWAIQNGEDARLCHILEEVAG--LPPKRSS--HSQEK---LLQNQVQKLIQEL 124 Q ++ A GE +L E L K++ +EK L + Q+Q+ + L Sbjct: 126 PPTKQEVKKA---GERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRL 182 Query: 125 KEQKERAQWEKEHLEERLLQ-TTRTLQEMEAELQNLQKSCLLQL--ARSSWVGRMLRSQT 181 +EQ+ +A+ + LEER Q + + EA +Q K ++ R SW G + S Sbjct: 183 EEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSP 242 Query: 182 G 182 G Sbjct: 243 G 243 >gi|110815800 WD repeat domain 32 [Homo sapiens] Length = 559 Score = 39.7 bits (91), Expect = 0.009 Identities = 33/95 (34%), Positives = 38/95 (40%), Gaps = 25/95 (26%) Query: 495 PGADTRKPPRPPRPLRKGRVREPRVSRRRPGTRGLLPPVSSGKLFHAREGPARPENPEIP 554 PGAD PP P R S RRPG L P SG+L P PE+ Sbjct: 40 PGADATHPPPPAR------------SPRRPGAPSLSPAPRSGEL----GLPGAPESSTAS 83 Query: 555 APQHLPAIPGDPTLPSPPAEAGLGLEDCRLQKEHR 589 A PG+P+ PSPP DCR + R Sbjct: 84 A-------PGEPSPPSPPCRR--PGPDCRAKSRGR 109 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.132 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,867,014 Number of Sequences: 37866 Number of extensions: 1934746 Number of successful extensions: 16677 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 731 Number of HSP's that attempted gapping in prelim test: 13049 Number of HSP's gapped (non-prelim): 4150 length of query: 634 length of database: 18,247,518 effective HSP length: 108 effective length of query: 526 effective length of database: 14,157,990 effective search space: 7447102740 effective search space used: 7447102740 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.