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Search of human proteins with 27734815
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27734815 hypothetical protein LOC285600 isoform 2 [Homo
sapiens]
(324 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27734815 hypothetical protein LOC285600 isoform 2 [Homo sapiens] 659 0.0
gi|224589077 hypothetical protein LOC285600 isoform 1 [Homo sapi... 656 0.0
gi|13699824 kinesin family member 11 [Homo sapiens] 35 0.090
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens] 34 0.15
gi|41327708 crumbs homolog 1 precursor [Homo sapiens] 34 0.20
gi|115529439 carboxylesterase 8 (putative) [Homo sapiens] 33 0.26
gi|68299759 ecotropic viral integration site 5 [Homo sapiens] 33 0.34
gi|62422577 neurobeachin [Homo sapiens] 32 0.59
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 30 2.2
gi|110349719 titin isoform N2-A [Homo sapiens] 30 2.9
gi|110349717 titin isoform novex-2 [Homo sapiens] 30 2.9
gi|110349713 titin isoform novex-1 [Homo sapiens] 30 2.9
gi|110349715 titin isoform N2-B [Homo sapiens] 30 2.9
gi|4505047 lumican precursor [Homo sapiens] 30 2.9
gi|45237195 Janus kinase and microtubule interacting protein 2 [... 30 3.8
gi|27886561 nuclear factor of activated T-cells, cytoplasmic, ca... 29 5.0
gi|27886559 nuclear factor of activated T-cells, cytoplasmic, ca... 29 5.0
gi|27886555 nuclear factor of activated T-cells, cytoplasmic, ca... 29 5.0
gi|4758804 nuclear factor of activated T-cells, cytoplasmic, cal... 29 5.0
gi|10337581 type I hair keratin 3B [Homo sapiens] 29 5.0
gi|52421790 mitogen-activated protein kinase kinase kinase 9 [Ho... 29 5.0
gi|150456444 hypothetical protein LOC57578 [Homo sapiens] 29 5.0
gi|14917115 keratin 31 [Homo sapiens] 29 6.5
gi|116089335 BR serine/threonine kinase 2 [Homo sapiens] 29 6.5
gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens] 29 6.5
gi|21493045 A-kinase anchor protein 6 [Homo sapiens] 29 6.5
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 29 6.5
gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens] 29 6.5
gi|22748791 hypothetical protein LOC126868 [Homo sapiens] 29 6.5
gi|14917119 keratin 34 [Homo sapiens] 28 8.5
>gi|27734815 hypothetical protein LOC285600 isoform 2 [Homo sapiens]
Length = 324
Score = 659 bits (1699), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC 60
MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC
Sbjct: 1 MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC 60
Query: 61 PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD 120
PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD
Sbjct: 61 PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD 120
Query: 121 LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN 180
LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN
Sbjct: 121 LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN 180
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI 240
EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI
Sbjct: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI 240
Query: 241 AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR 300
AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR
Sbjct: 241 AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR 300
Query: 301 ENAVRVVKTSKSSSKHRGAVHALG 324
ENAVRVVKTSKSSSKHRGAVHALG
Sbjct: 301 ENAVRVVKTSKSSSKHRGAVHALG 324
>gi|224589077 hypothetical protein LOC285600 isoform 1 [Homo
sapiens]
Length = 1275
Score = 656 bits (1693), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC 60
MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC
Sbjct: 1 MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC 60
Query: 61 PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD 120
PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD
Sbjct: 61 PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD 120
Query: 121 LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN 180
LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN
Sbjct: 121 LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN 180
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI 240
EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI
Sbjct: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI 240
Query: 241 AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR 300
AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR
Sbjct: 241 AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR 300
Query: 301 ENAVRVVKTSKSSSKHRGAVHAL 323
ENAVRVVKTSKSSSKHRGAVHAL
Sbjct: 301 ENAVRVVKTSKSSSKHRGAVHAL 323
>gi|13699824 kinesin family member 11 [Homo sapiens]
Length = 1056
Score = 35.0 bits (79), Expect = 0.090
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 37/275 (13%)
Query: 35 DEKIEQNAASIKHCIKEIQSEINKQCPGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLI 94
+EK+ A+ + + ++E +++ L + D + + +N +E+ I +L
Sbjct: 489 EEKLHDAASKLLNTVEETTKDVSG------LHSKLDRKKAVDQHN---AEAQDIFGKNLN 539
Query: 95 KFFKTLQDLLKNEQNQEEMTLDL---LWDLSCHSSVSFPSTLSGTSFHFLSRTSLHSVED 151
F +++L+K+ ++++ L++ L+ SSVS T++ + SL S+ +
Sbjct: 540 SLFNNMEELIKDGSSKQKAMLEVHKTLFGNLLSSSVSALDTITTVALG-----SLTSIPE 594
Query: 152 NSSMDVKSMWDDIRLHLRRFLVSKLQSHNEINNSQQKILLKKQCLQQL-LFLYPESEVII 210
N S V +++ I SK IN +LK L L + L P I+
Sbjct: 595 NVSTHVSQIFNMILKEQSLAAESKTVLQELIN------VLKTDLLSSLEMILSPTVVSIL 648
Query: 211 KYQNIQNKLLANLLWNCFPSYNRDSNLDVIAHGYQSTMLKLYSVIKEDFNTLCEILAPSS 270
K + + L ++ LD G+ S + ++E NT+C ++
Sbjct: 649 KINSQLKHIFKTSLTVADKIEDQKKELD----GFLSILCNNLHELQE--NTICSLVESQK 702
Query: 271 M-------VKFIKETYLDTVTEEMAKFLENFCELQ 298
+K IK+T+ + + M + E FC L+
Sbjct: 703 QCGNLTEDLKTIKQTHSQELCKLMNLWTERFCALE 737
>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
Length = 3062
Score = 34.3 bits (77), Expect = 0.15
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 18/194 (9%)
Query: 11 SFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQ----SEINKQCPGVQLQ 66
S D+ + S+ G+ FE+ F+D EK +KHC K I+ ++ N+ P L
Sbjct: 2613 SDDITSDITSWEGNTHFEESFTDGPEKELDLFTYLKHCAKNIKAKDVAKPNEDVPSHVLI 2672
Query: 67 TTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLK-NEQNQEEMTLDLLWDLSCHS 125
T E L +T E S + D L D+++ N+ +E ++S +
Sbjct: 2673 TAPPMKEHLQLGVNNTKEKSTSTQKD-----SPLNDMIQSNDLCSKESISGGGTEISQFT 2727
Query: 126 SVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHNEINNS 185
S +TLS LSR + V N + + + + ++ S EINN
Sbjct: 2728 PESIEATLS-----ILSRKHVEDVGKNDFLQSERCANGLGNDNSSNTLNTDYSFLEINNK 2782
Query: 186 QQKI---LLKKQCL 196
+++I L K+Q L
Sbjct: 2783 KERIEQQLPKEQAL 2796
>gi|41327708 crumbs homolog 1 precursor [Homo sapiens]
Length = 1406
Score = 33.9 bits (76), Expect = 0.20
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 60 CP-GVQLQTTTDCFEWLTN--YNYSTSESSFISHGDL------IKFFKTLQD----LLKN 106
CP G Q Q FE + N +N + + F S+G++ I F +D +L
Sbjct: 933 CPHGAQCQPVLQGFECIANAVFNGQSGQILFRSNGNITRELTNITFGFRTRDANVIILHA 992
Query: 107 EQNQEEMTLDLLWDLSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRL 166
E+ E + ++S S F SG SF+ LS TSL SV D + W ++ L
Sbjct: 993 EKEPEFL------NISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGT-------WHEVTL 1039
Query: 167 HLRRFLVSKLQSHNEINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQN 217
+ L + E++N + + L FL +++ + + I N
Sbjct: 1040 SMTDPLSQTSRWQMEVDN-ETPFVTSTIATGSLNFLKDNTDIYVGDRAIDN 1089
>gi|115529439 carboxylesterase 8 (putative) [Homo sapiens]
Length = 491
Score = 33.5 bits (75), Expect = 0.26
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 223 LLWNCFPSYNR----DSNLDVIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKET 278
++W+ P + D L ++ G S++ L V +FN L V + E
Sbjct: 314 IIWSMSPVVDGVVIPDDPLVLLTQGKVSSVPYLLGVNNLEFNWLLPYNITKEQVPLVVEE 373
Query: 279 YLDTVTEEMAKFLENFCELQFRENAVRVVKTSKSSSKHRG 318
YLD V E K L N + ++A V T +++ HRG
Sbjct: 374 YLDNVNEHDWKMLRNRM-MDIVQDATFVYATLQTAHYHRG 412
>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
Length = 810
Score = 33.1 bits (74), Expect = 0.34
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 22/239 (9%)
Query: 28 EQIFSD-IDEKIEQNAASIKHCIKEIQSEINKQC--PGVQLQTTTDCFEWLTNYNYSTSE 84
+Q+ +D + EK+ + +K+ + S++ Q P L TT+ L+ S S
Sbjct: 16 KQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTSSSTT-LSTPALSPSS 74
Query: 85 SSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWDLSCHSSVSFPSTLSGTSFHFLSRT 144
S +S DL +LL + Q + L D SV+ SG+S S
Sbjct: 75 PSQLSPDDL--------ELLAKLEEQNRL---LETDSKSLRSVNGSRRNSGSSLVSSSSA 123
Query: 145 S--LHSVEDNSSM---DVKSMWDDIRLHLRRFLVSKLQSHNEINNSQQKILLKKQCLQQL 199
S L +E++S + + + W+D+R + + K H I + + I+ + C Q
Sbjct: 124 SSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQV--KELVHKGIPHHFRAIVWQLLCSAQS 181
Query: 200 LFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVIAHGYQSTMLKLYSVIKED 258
+ + + ++K + KL+ + +P +N D + ++K YS++ +
Sbjct: 182 MPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE 240
>gi|62422577 neurobeachin [Homo sapiens]
Length = 2946
Score = 32.3 bits (72), Expect = 0.59
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 184 NSQQKILLKKQCLQQLLFLYPESEVIIKYQN-IQNKLLANLLWNCFPSYNRDSNLDVIAH 242
N+ +IL ++ C Q + +PE + +K QN + K++A LL N PS + L +
Sbjct: 811 NTLYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPS----AELMEVRR 866
Query: 243 GYQSTMLKLYSVIKEDFNTLCE 264
+ S M+KL+S +E+ L +
Sbjct: 867 LFLSDMIKLFSNSRENRRCLLQ 888
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 30.4 bits (67), Expect = 2.2
Identities = 65/310 (20%), Positives = 112/310 (36%), Gaps = 66/310 (21%)
Query: 26 EFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQCPGVQLQTTTDCFEWLTNYNYSTSES 85
E E + ++I+E QN + KH I I+ +++KQ
Sbjct: 489 EKETLIAEIEELDRQNQEATKHMIL-IKDQLSKQ---------------------QNEGD 526
Query: 86 SFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWDLSCHSSVSFPSTLSGTSFHFLSRTS 145
S IS K + L D K E+ +D+ +L S ++ H +
Sbjct: 527 SIIS-----KLKQDLNDEKKRVHQLEDDKMDITKELDVQKEKLIQSEVALNDLHLTKQKL 581
Query: 146 LHSVED---------NSSMDVKSMWDDIRLHLR-------RFLVSKLQSHNEINNSQQKI 189
VE+ S++ ++ +++ H+R R +QS N+ +NS K
Sbjct: 582 EDKVENLVDQLNKSQESNVSIQKENLELKEHIRQNEEELSRIRNELMQSLNQDSNSNFKD 641
Query: 190 LLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVIAHGYQSTML 249
L K+ E+EV NL N + NL +A +
Sbjct: 642 TLLKE---------REAEV------------RNLKQNLSELEQLNENLKKVAFDVKMENE 680
Query: 250 KLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR--ENAVRVV 307
KL ++ + L E LA ++ + K T ++T+ E + C + R E A +
Sbjct: 681 KLVLACEDVRHQLEECLAGNNQLSLEKNTIVETLKMEKGEIEAELCWAKKRLLEEANKYE 740
Query: 308 KTSKSSSKHR 317
KT + S R
Sbjct: 741 KTIEELSNAR 750
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 239 VIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKE-TYLDTVTEEMAKFLENFCEL 297
++ H +K Y+ +DF T C + V+F++ T L +EMA+F CEL
Sbjct: 12341 LVIHDCTPEDIKTYTCDAKDFKTSCNLNVVPPHVEFLRPLTDLQVREKEMARF---ECEL 12397
Query: 298 QFRENA--------VRVVKTSKSSSKHRGAVHAL 323
RENA + K K +GAV L
Sbjct: 12398 S-RENAKVKWFKDGAEIKKGKKYDIISKGAVRIL 12430
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 239 VIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKE-TYLDTVTEEMAKFLENFCEL 297
++ H +K Y+ +DF T C + V+F++ T L +EMA+F CEL
Sbjct: 6036 LVIHDCTPEDIKTYTCDAKDFKTSCNLNVVPPHVEFLRPLTDLQVREKEMARF---ECEL 6092
Query: 298 QFRENA--------VRVVKTSKSSSKHRGAVHAL 323
RENA + K K +GAV L
Sbjct: 6093 S-RENAKVKWFKDGAEIKKGKKYDIISKGAVRIL 6125
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 239 VIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKE-TYLDTVTEEMAKFLENFCEL 297
++ H +K Y+ +DF T C + V+F++ T L +EMA+F CEL
Sbjct: 5969 LVIHDCTPEDIKTYTCDAKDFKTSCNLNVVPPHVEFLRPLTDLQVREKEMARF---ECEL 6025
Query: 298 QFRENA--------VRVVKTSKSSSKHRGAVHAL 323
RENA + K K +GAV L
Sbjct: 6026 S-RENAKVKWFKDGAEIKKGKKYDIISKGAVRIL 6058
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 239 VIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKE-TYLDTVTEEMAKFLENFCEL 297
++ H +K Y+ +DF T C + V+F++ T L +EMA+F CEL
Sbjct: 5844 LVIHDCTPEDIKTYTCDAKDFKTSCNLNVVPPHVEFLRPLTDLQVREKEMARF---ECEL 5900
Query: 298 QFRENA--------VRVVKTSKSSSKHRGAVHAL 323
RENA + K K +GAV L
Sbjct: 5901 S-RENAKVKWFKDGAEIKKGKKYDIISKGAVRIL 5933
>gi|4505047 lumican precursor [Homo sapiens]
Length = 338
Score = 30.0 bits (66), Expect = 2.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 230 SYNRDSNLDVIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLD 281
SYN+ N+ + ++ L++ + K D + C+IL P S K IK LD
Sbjct: 262 SYNKLKNIPTVNENLENYYLEVNQLEKFDIKSFCKILGPLSYSK-IKHLRLD 312
>gi|45237195 Janus kinase and microtubule interacting protein 2
[Homo sapiens]
Length = 810
Score = 29.6 bits (65), Expect = 3.8
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 137 SFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHNEINNSQ-QKILLKKQC 195
S H + ++ ++ S D++ + D+I+ R ++ L+ E QK+ L+K+
Sbjct: 186 SEHQSHQEAISKIKWESERDIRRLMDEIKAKDR--IIFSLEKELETQTGYVQKLQLQKEA 243
Query: 196 LQQLLFLYPESE 207
L + LFL E+E
Sbjct: 244 LDEQLFLVKEAE 255
>gi|27886561 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 1 [Homo sapiens]
Length = 1075
Score = 29.3 bits (64), Expect = 5.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 110 QEEMTLDLLWDLSCH--SSVSFPSTLSGTSFHFLSRT--SLHSVEDNSSM 155
Q++ TL L +L C SS+ F S+ SG++ H L+ T S+H++ SM
Sbjct: 833 QQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPHSVHTLPHLQSM 882
>gi|27886559 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 4 [Homo sapiens]
Length = 1045
Score = 29.3 bits (64), Expect = 5.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 110 QEEMTLDLLWDLSCH--SSVSFPSTLSGTSFHFLSRT--SLHSVEDNSSM 155
Q++ TL L +L C SS+ F S+ SG++ H L+ T S+H++ SM
Sbjct: 833 QQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPHSVHTLPHLQSM 882
>gi|27886555 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 3 [Homo sapiens]
Length = 1065
Score = 29.3 bits (64), Expect = 5.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 110 QEEMTLDLLWDLSCH--SSVSFPSTLSGTSFHFLSRT--SLHSVEDNSSM 155
Q++ TL L +L C SS+ F S+ SG++ H L+ T S+H++ SM
Sbjct: 833 QQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPHSVHTLPHLQSM 882
>gi|4758804 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 3 isoform 2 [Homo sapiens]
Length = 1068
Score = 29.3 bits (64), Expect = 5.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 110 QEEMTLDLLWDLSCH--SSVSFPSTLSGTSFHFLSRT--SLHSVEDNSSM 155
Q++ TL L +L C SS+ F S+ SG++ H L+ T S+H++ SM
Sbjct: 833 QQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPHSVHTLPHLQSM 882
>gi|10337581 type I hair keratin 3B [Homo sapiens]
Length = 404
Score = 29.3 bits (64), Expect = 5.0
Identities = 26/117 (22%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIK-YQNIQNKLLANLLWNCFPSYNRDSNLDV 239
E +N++ + L++++ QQ L P + K + +Q K+L + N D N +
Sbjct: 78 ERDNAELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCSKSENARLVVQID-NAKL 136
Query: 240 IAHGYQS---TMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLEN 293
A +++ T L +++ D N+L IL ++ + E ++++ EE+ +N
Sbjct: 137 AADDFRTKYQTEQSLRQLVESDINSLRRILDELTLCRSDLEAQMESLKEELLSLKQN 193
>gi|52421790 mitogen-activated protein kinase kinase kinase 9 [Homo
sapiens]
Length = 1118
Score = 29.3 bits (64), Expect = 5.0
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 119 WDLSCHSSVSFPS------TLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIR 165
W+ HS SF + T+ + F + + S H ++DN +++ M+D +R
Sbjct: 386 WNPDPHSRPSFTNILDQLTTIEESGFFEMPKDSFHCLQDNWKHEIQEMFDQLR 438
>gi|150456444 hypothetical protein LOC57578 [Homo sapiens]
Length = 2458
Score = 29.3 bits (64), Expect = 5.0
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 29/176 (16%)
Query: 111 EEMTLDLLWDLSCHSSVSFPSTLSG--TSFHFLSRTSLHSVE-----DNSSMDVKSMWDD 163
E ++L+ L C+ FP+T++ T+ LS +L ++ N V+S+ D
Sbjct: 994 ETLSLEAQLHLDCNKEFPFPTTITAVRTNVANLSDAALWKIKRARFARNRQKSVRSLRDS 1053
Query: 164 IR--------LHLRRFLVSKLQSHNEINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNI 215
++ L L L SK++ + N++ K LL PE + I +Q +
Sbjct: 1054 VKGPVESKRALSLPETLTSKIRQQSPENDNTIKDLL------------PE-DAGIDHQTV 1100
Query: 216 QNKLLANLLWNCFPSYNRDSNLDVIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSM 271
+ + + + +S++ A + + LY ++ D C ++AP M
Sbjct: 1101 HQLITVLMKFMAKDESSAESDIS-SAKAFNTVKRHLYVLLGYDQQEGCFMIAPQKM 1155
>gi|14917115 keratin 31 [Homo sapiens]
Length = 416
Score = 28.9 bits (63), Expect = 6.5
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIK-YQNIQNKLLANLLWNCFPSYNRDSNLDV 239
E +N++ + L++++ QQ L P + K + +Q K+L N D N +
Sbjct: 78 ERDNAELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCTKSENARLVVQID-NAKL 136
Query: 240 IAHGYQS---TMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEM 287
A +++ T L L +++ D N L IL ++ K E ++++ EE+
Sbjct: 137 AADDFRTKYQTELSLRQLVESDINGLRRILDELTLCKSDLEAQVESLKEEL 187
>gi|116089335 BR serine/threonine kinase 2 [Homo sapiens]
Length = 668
Score = 28.9 bits (63), Expect = 6.5
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 98 KTLQDLLKNEQNQEEMTLDLLWD 120
K LQDLL E+NQE+M LL D
Sbjct: 317 KLLQDLLSEEENQEKMIYFLLLD 339
>gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens]
Length = 402
Score = 28.9 bits (63), Expect = 6.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 161 WDDIRLHLRRFLVSKLQSHNEINNSQQKILLKKQCLQQLLFLYP 204
W L FL +L S N+I + ILL++ L+QLL L P
Sbjct: 324 WSSTSLQRPLFLAVRLASWNQILDPWVYILLRQAVLRQLLRLLP 367
>gi|21493045 A-kinase anchor protein 6 [Homo sapiens]
Length = 2319
Score = 28.9 bits (63), Expect = 6.5
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 15/136 (11%)
Query: 65 LQTTTDCFEWLTNYNYS-------TSESSFISHGDLIKFFKTLQDLLKNEQN----QEEM 113
LQ +T WLT+Y + +S +S G + + K DLL +N E+
Sbjct: 1590 LQRSTSLESWLTSYKSNEDLFSCHSSGDISVSSGSVGELSKRTLDLLNRLENIQSPSEQK 1649
Query: 114 TLDLLWDLSCHSS---VSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMW-DDIRLHLR 169
+ D++ SS +SF +S ++ S S+ + SS D S+ +DI LH
Sbjct: 1650 IKRSVSDITLQSSSQKMSFTGQMSLDIASSINEDSAASLTELSSSDELSLCSEDIVLHKN 1709
Query: 170 RFLVSKLQSHNEINNS 185
+ S + S
Sbjct: 1710 KIPESNASFRKRLTRS 1725
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 28.9 bits (63), Expect = 6.5
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 19 NSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQCPGVQLQTTTDCFEWLTNY 78
NSF +E I+ + E ++ ++ H I+E++ +I K LQ ++ +
Sbjct: 1011 NSFHSSIE--AIWEECKEIVKASSKK-SHQIEELEQQIEK------LQAEVKGYK---DE 1058
Query: 79 NYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDL 117
N E + DL+K +TL LK E ++ +TLD+
Sbjct: 1059 NNRLKEKEHKNQDDLLKEKETLIQQLKEELQEKNVTLDV 1097
>gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]
Length = 2354
Score = 28.9 bits (63), Expect = 6.5
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 135 GTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHNEINNSQQKILLKKQ 194
G+ F +S HS+ D S + K + +L + + + +Q N N +
Sbjct: 403 GSEMSFDCSSSFHSLTDQSKVSAKEV------NLSKEVRTDVQYKN---NKSYVSKISSD 453
Query: 195 CLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLD 238
C L + +S++I+K ++QN +L+ + S + ++N D
Sbjct: 454 CDDILHLVTNQSQMIVKEISLQNARHISLVDQSYESSSSETNFD 497
>gi|22748791 hypothetical protein LOC126868 [Homo sapiens]
Length = 362
Score = 28.9 bits (63), Expect = 6.5
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Query: 192 KKQCLQQLLFLY-----PESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVIAHGYQS 246
+++C Q + L P + +I ++Q L W C Y + V + +
Sbjct: 256 RRKCFQVMRHLKEDIWCPGNRPVITSHHLQTVLF----WTC-EKYPHFKDWQVFSKAFLR 310
Query: 247 TMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLEN 293
+ KL+ + + F + S++ + T LDTV +++A FL+N
Sbjct: 311 LVRKLHKCVSQHF-LKHYFVRNSNLFQCANPTELDTVAQKLATFLKN 356
>gi|14917119 keratin 34 [Homo sapiens]
Length = 436
Score = 28.5 bits (62), Expect = 8.5
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIK-YQNIQNKLLANLLWNCFPSYNRDSNLDV 239
E +N++ + L++++ QQ L P + K + +Q K+L N N D N +
Sbjct: 120 ERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENARLVVNID-NAKL 178
Query: 240 IAHGYQS---TMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLEN 293
+ ++S T L +++ D N++ IL ++ K E+ ++++ EE+ +N
Sbjct: 179 ASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLREELICLKKN 235
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,251,688
Number of Sequences: 37866
Number of extensions: 443300
Number of successful extensions: 1528
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1507
Number of HSP's gapped (non-prelim): 47
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.