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Search of human proteins with 26051240
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|26051240 tumor necrosis factor, alpha-induced protein 2
[Homo sapiens]
(654 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|26051240 tumor necrosis factor, alpha-induced protein 2 [Homo... 1279 0.0
gi|117938266 hypothetical protein LOC91828 [Homo sapiens] 149 8e-36
gi|106879204 exocyst complex component 3-like [Homo sapiens] 147 2e-35
gi|31083351 Sec6 protein [Homo sapiens] 145 1e-34
gi|226371708 exocyst complex component 3-like 2 [Homo sapiens] 116 7e-26
gi|153070260 myristoylated alanine-rich protein kinase C substra... 39 0.015
gi|7656936 zinc finger, HIT domain containing 2 [Homo sapiens] 38 0.026
gi|23503317 coiled-coil domain containing 96 [Homo sapiens] 37 0.044
gi|239756693 PREDICTED: similar to coiled-coil domain containing... 37 0.075
gi|157364934 fibrosin [Homo sapiens] 37 0.075
gi|12711676 UPF3 regulator of nonsense transcripts homolog A iso... 36 0.098
gi|18375525 UPF3 regulator of nonsense transcripts homolog A iso... 36 0.098
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 35 0.17
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 35 0.17
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 35 0.17
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 35 0.17
gi|110611218 ribosome binding protein 1 [Homo sapiens] 35 0.22
gi|110611220 ribosome binding protein 1 [Homo sapiens] 35 0.22
gi|154354979 myosin X [Homo sapiens] 35 0.22
gi|68989256 ras inhibitor RIN1 [Homo sapiens] 35 0.22
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 35 0.22
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 35 0.22
gi|122937416 hypothetical protein LOC85452 [Homo sapiens] 35 0.28
gi|4505257 moesin [Homo sapiens] 35 0.28
gi|5803092 methionyl aminopeptidase 2 [Homo sapiens] 35 0.28
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 35 0.28
gi|56550043 sarcolemma associated protein [Homo sapiens] 35 0.28
gi|30795231 brain abundant, membrane attached signal protein 1 [... 34 0.37
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 34 0.49
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 34 0.49
>gi|26051240 tumor necrosis factor, alpha-induced protein 2 [Homo
sapiens]
Length = 654
Score = 1279 bits (3309), Expect = 0.0
Identities = 654/654 (100%), Positives = 654/654 (100%)
Query: 1 MSEASSEDLVPPLEAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSA 60
MSEASSEDLVPPLEAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSA
Sbjct: 1 MSEASSEDLVPPLEAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSA 60
Query: 61 EPEDAAGSRQGLDGPPPTVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVR 120
EPEDAAGSRQGLDGPPPTVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVR
Sbjct: 61 EPEDAAGSRQGLDGPPPTVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVR 120
Query: 121 RQSKVEALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAA 180
RQSKVEALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAA
Sbjct: 121 RQSKVEALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAA 180
Query: 181 TRPRRWLQLWRRGVAEAAEERMGQRPAAGAEVPESVFLHLGRTMKEDLEAVVERLKPLFP 240
TRPRRWLQLWRRGVAEAAEERMGQRPAAGAEVPESVFLHLGRTMKEDLEAVVERLKPLFP
Sbjct: 181 TRPRRWLQLWRRGVAEAAEERMGQRPAAGAEVPESVFLHLGRTMKEDLEAVVERLKPLFP 240
Query: 241 AEFGVVAAYAESYHQHFAAHLAAVAQFELCERDTYMLLLWVQNLYPNDIINSPKLVGELQ 300
AEFGVVAAYAESYHQHFAAHLAAVAQFELCERDTYMLLLWVQNLYPNDIINSPKLVGELQ
Sbjct: 241 AEFGVVAAYAESYHQHFAAHLAAVAQFELCERDTYMLLLWVQNLYPNDIINSPKLVGELQ 300
Query: 301 GMGLGSLLPPRQIRLLEATFLSSEAANVRELMDRALELEARRWAEDVPPQRLDGHCHSEL 360
GMGLGSLLPPRQIRLLEATFLSSEAANVRELMDRALELEARRWAEDVPPQRLDGHCHSEL
Sbjct: 301 GMGLGSLLPPRQIRLLEATFLSSEAANVRELMDRALELEARRWAEDVPPQRLDGHCHSEL 360
Query: 361 AIDIIQITSQAQAKAESITLDLGSQIKRVLLVELPAFLRSYQRAFNEFLERGKQLTNYRA 420
AIDIIQITSQAQAKAESITLDLGSQIKRVLLVELPAFLRSYQRAFNEFLERGKQLTNYRA
Sbjct: 361 AIDIIQITSQAQAKAESITLDLGSQIKRVLLVELPAFLRSYQRAFNEFLERGKQLTNYRA 420
Query: 421 NVIANINNCLSFRMSMEQNWQVPQDTLSLLLGPLGELKSHGFDTLLQNLHEDLKPLFKRF 480
NVIANINNCLSFRMSMEQNWQVPQDTLSLLLGPLGELKSHGFDTLLQNLHEDLKPLFKRF
Sbjct: 421 NVIANINNCLSFRMSMEQNWQVPQDTLSLLLGPLGELKSHGFDTLLQNLHEDLKPLFKRF 480
Query: 481 THTRWAAPVETLENIIATVDTRLPEFSELQGCFREELMEALHLHLVKEYIIQLSKGRLVL 540
THTRWAAPVETLENIIATVDTRLPEFSELQGCFREELMEALHLHLVKEYIIQLSKGRLVL
Sbjct: 481 THTRWAAPVETLENIIATVDTRLPEFSELQGCFREELMEALHLHLVKEYIIQLSKGRLVL 540
Query: 541 KTAEQQQQLAGYILANADTIQHFCTQHGSPATWLQPALPTLAEIIRLQDPSAIKIEVATY 600
KTAEQQQQLAGYILANADTIQHFCTQHGSPATWLQPALPTLAEIIRLQDPSAIKIEVATY
Sbjct: 541 KTAEQQQQLAGYILANADTIQHFCTQHGSPATWLQPALPTLAEIIRLQDPSAIKIEVATY 600
Query: 601 ATCYPDFSKGHLSAILAIKGNLSNSEVKRIRSILDVSMGAQEPSRPLFSLIKVG 654
ATCYPDFSKGHLSAILAIKGNLSNSEVKRIRSILDVSMGAQEPSRPLFSLIKVG
Sbjct: 601 ATCYPDFSKGHLSAILAIKGNLSNSEVKRIRSILDVSMGAQEPSRPLFSLIKVG 654
>gi|117938266 hypothetical protein LOC91828 [Homo sapiens]
Length = 722
Score = 149 bits (376), Expect = 8e-36
Identities = 168/633 (26%), Positives = 270/633 (42%), Gaps = 58/633 (9%)
Query: 58 SSAEPEDAAGSRQGLDGPPPT---VEELKAALE----------RGQLEAARPLLALEREL 104
S A PE +G G+ T EELK E R L A LL LE L
Sbjct: 100 SQATPEVPSGVMNGVSQQASTGAASEELKPEAEGKSVADLITERQLLAAFEQLLRLETLL 159
Query: 105 AAAAAAGGVSEEE--LVRRQSKVEALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQE 162
A A+ ++ RR V LY+ L ++ ++R L++ ALA +A
Sbjct: 160 VAEKASRTFEQDPTAFARRAMDVCLLYDGLAAEIGAIVRETLDSDGVDAA-ALAELARVV 218
Query: 163 REDRQAAAAGPGTSGLAATRPRRWLQLWRRGVAEAAEERMGQRPAAGAEVPES------- 215
+ +A + P T PRRW Q W V +A+ER+ +RP AG E+
Sbjct: 219 SAEEEAHPSPPDDGDFLRT-PRRWRQHWEEAVRRSAQERV-RRPGAGWAFGEAEGASGLA 276
Query: 216 -VFLHLGRTMKEDLEAVVERLKPLFPAE-FGVVAAYAESYHQHFAAHLAAVAQFELCERD 273
+ LG ++ DL+ V + ++P + A F Y ++H A L +A+
Sbjct: 277 QLLAELGGLVRRDLQKVRQEVQPAYAAAGFPAWEVYLRAFHSAVAQRLQELARDARGCEQ 336
Query: 274 TYMLLLWVQNLYPN-DIINSPKLVGELQGMGLGSLLPPRQIRLLEATFLSSEAANVRELM 332
Y+LL W N+Y + D + +P L L L LL P LE+ + S A +
Sbjct: 337 LYILLDWAANVYGSPDFLGAPGLA--LPAEPLPPLLAPDVWARLESDYTSFLEAKIASCF 394
Query: 333 DRALELEARRWAEDVPPQRLDGHCHSELAIDIIQITSQAQAKAESITLDLGSQIKRVLLV 392
D L+LE WA P+ L G + L++D+ + ++ A +I+ +L + R+
Sbjct: 395 DSILQLEQSHWAAAEVPEVLQGLYQAPLSMDVHMLVAEHVKAAGAISAELEATTLRICTR 454
Query: 393 ELPAFLRSYQRAF--NEFLERGKQLTNYRANVIANINNCLSFRMSMEQNWQVPQDTLSLL 450
L F+ +++AF +E + ++ A IN C R S+ + Q+ L
Sbjct: 455 ALGLFVPRFEKAFLASEAVS--------EPHLGAYINACEELRTSLLSRFPGTQEELE-- 504
Query: 451 LGPLGELKSHGFDTLLQNLHEDLKPLFKRFTHTRWAAPVETLENIIATVDTRLPEFSELQ 510
PL LLQ L +L+PLF+ W + L ++ V T +
Sbjct: 505 -KPLVTATCSFQKHLLQGLQRELQPLFRVVCTRDWLTQ-DWLHPLMDKVVTFAGHLQRVA 562
Query: 511 GCFREELMEALHLHLVKEYIIQLSKGRLVLKTAEQ---QQQLAGYILANADTIQHFCTQH 567
+E ++ +H +V+EY+ + + R + E+ Q+++ A +DT Q
Sbjct: 563 RPRAQETLQEVHRFVVREYLARALRPRERFRGMERMHGSQKMSLDAQAISDTFQGL---- 618
Query: 568 GSPATWLQPALPTLAEIIRLQDPSAIKIEVATYATCYPDFSKGHLSAILAIK--GNLSNS 625
GS ATWL A+ +AEI+ I+ + T YPD + H+ AILA++ G N
Sbjct: 619 GSEATWLDQAIQCVAEILGETYKDDIQRHLETLIRSYPDIRRDHILAILALRRLGRQRNQ 678
Query: 626 E-VKRIRSILDVSMGAQEPSRP----LFSLIKV 653
++ + +L + GA P LF IKV
Sbjct: 679 HLLQHTQDLLRAAAGAAGAEAPRGRVLFEEIKV 711
>gi|106879204 exocyst complex component 3-like [Homo sapiens]
Length = 746
Score = 147 bits (372), Expect = 2e-35
Identities = 161/624 (25%), Positives = 271/624 (43%), Gaps = 41/624 (6%)
Query: 65 AAGSRQGLDGPPPTVEELKAAL-ERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQS 123
A G QG+ T+E L+ + + QL+A LL R + AA + + L+ Q
Sbjct: 103 ARGLLQGMSQALQTLEPLRERVAQHKQLQALSHLLPRLRAVPAAVS----HTQTLIDGQQ 158
Query: 124 KVEALYEL-----LRDQV---LGVLRRPL--------EAPPERLRQALAVVAEQEREDRQ 167
+EA L LR+ LG L P+ EA + + A + RED
Sbjct: 159 FLEAYVSLRELEQLREDTWAPLGGLELPVFQGLDLLFEALGQAVEAAAGAAGKLAREDPA 218
Query: 168 AAAAGPGTSGLAATR-------PRRWLQLWRRGVAEAAEERMGQRPAAGAEVPESVFLHL 220
A + + R PR W Q R + E E+ P A +L
Sbjct: 219 LLVAAVRVAEVETGRTTPLGQVPRDWRQRCLRALQEGLEQAHFGSPLLPAPGALPGWLEA 278
Query: 221 GRT-MKEDLEAVVERLKPLFPAEFGVVAAYAESYHQHFAAHLA-AVAQFELCERDTYMLL 278
R + +L + P P ++ VV +A + H L +A EL D + LL
Sbjct: 279 LRVALPVELATAEALVAPCCPPQYNVVQLWAHTLHSGLRRSLQNLLAGPELEAADAFALL 338
Query: 279 LWVQNLY-PNDIINSPKLVGELQGMGLGSLLPPRQIRLLEATFLSSEAANVRELMDRALE 337
W ++Y +++ S +L E L LL I LEATF+++ A+V + + AL+
Sbjct: 339 HWALHVYLGQEMMGSLELGPEADVSQLEPLLTLENIEQLEATFVANIQASVSQWLQNALD 398
Query: 338 LEARRWAEDVPPQR-LDGHCHSELAIDIIQITSQAQAKAESITLDLGSQIKRVLLVELPA 396
E W + P G +S + ++QI + A ++ L ++ + L EL
Sbjct: 399 GEVAEWGREHGPNTDPSGSYYSPMPAIVLQILEENIRVASLVSESLQQRVHGMALSELGT 458
Query: 397 FLRSYQRAFNEFLE---RGKQLT-NYRANVIANINN--CLSFRMSMEQNWQVPQDTLSLL 450
FLRS+ A F RGK + +Y ++A +N+ LS +S+ Q P L+ +
Sbjct: 459 FLRSFSDALIRFSRDHFRGKSMAPHYVPYLLAALNHKSALSSSVSVLQLDGAPSGALAPV 518
Query: 451 LGPLGELKSHGFDTLLQNLHEDLKPLFKRFTHTRWAAPVETLENIIATVDTRLPEFSELQ 510
L EL+ + +L+ L +L+PLF +W + E L+++ +F ++
Sbjct: 519 EAALDELQRRIYRLVLEALQAELQPLFADLPSRQWLSSPELLQSVCERTGRFCRDFWRVR 578
Query: 511 GCFREELMEALHLHLVKEYIIQLSKGRLVLKTAEQQQQLAGYILANADTIQHFCTQHG-S 569
+ L+ +V +Y+ L +GRLV + A+++ Q A + +A +Q G
Sbjct: 579 NPTVQLLLAEAERAVVLQYLSALMQGRLVCRGADERTQAAERLRHDAAQLQQLFLSLGLE 638
Query: 570 PATWLQPALPTLAEIIRLQDPSAIKIEVATYATCYPDFSKGHLSAILAIKGNLSNSEVKR 629
P L L E++ L+DP+ + +EVA +PD S+ H+SA+L ++G+LS +
Sbjct: 639 ENAHCAPVLLALRELLNLRDPALLGLEVAGLRQQFPDVSEDHVSALLGLRGDLSREQHLA 698
Query: 630 IRSILDVSM--GAQEPSRPLFSLI 651
S L ++ + R LFSL+
Sbjct: 699 ALSSLQAALPPSPRASRRVLFSLV 722
>gi|31083351 Sec6 protein [Homo sapiens]
Length = 745
Score = 145 bits (365), Expect = 1e-34
Identities = 141/619 (22%), Positives = 270/619 (43%), Gaps = 47/619 (7%)
Query: 76 PPTVEELKAALERGQL-EAARPLLALERELAAAAA------AGGVSEEELVRRQ-SKVEA 127
P V E + +E+G L +A R L+ LE +G + L+ +
Sbjct: 123 PEIVRETQDLIEQGALLQAHRKLMDLECSRDGLMYEQYRMDSGNTRDMTLIHGYFGSTQG 182
Query: 128 LYELLRDQVLGVLRRPL---EAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAATRPR 184
L + L Q+ VL+R L P L + ++ +E+ DR+ T + RP+
Sbjct: 183 LSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEKIDRRILDRKKQTGFVPPGRPK 242
Query: 185 RWLQLWRRGVAEAAEERMGQRPAAGAEVPESVFLHLGRTMK-------EDLEAVVERLKP 237
W + + R+ A+ ES + L R ++ +DL +
Sbjct: 243 NWKEKMFTILERTVTTRI---EGTQADTRESDKMWLVRHLEIIRKYVLDDLIVAKNLMVQ 299
Query: 238 LFPAEFGVVAAYAESYHQHFAAHLAAVAQFELCERDTYMLLLWVQNLYPN-DIINSPKLV 296
FP + + YHQ + + +A +L + LL WV N Y + +++ + +L
Sbjct: 300 CFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYTSTEMMRNVELA 359
Query: 297 GELQGMGLGSLLPPRQIRLLEATFLSSEAANVRELMDRALELEARRWAEDVPPQR-LDGH 355
E+ L LL P + L T++S+ +N+ + +ALE + + W ++ P+ DG+
Sbjct: 360 PEVDVGTLEPLLSPHVVSELLDTYMSTLTSNIIAWLRKALETDKKDWVKETEPEADQDGY 419
Query: 356 CHSELAIDIIQITSQAQAKAESITLDLGSQIKRVLLVELPAFLRSYQ---RAFNEFLERG 412
+ L + Q+ Q A I+ DL +++ + L ++ +FL Y+ + + E R
Sbjct: 420 YQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRN 479
Query: 413 KQLTN-YRANVIANINNCLSFRMSM------------EQNWQVPQDTLSLLLGPLGELKS 459
+Q + Y +IA INNC +F+ S+ E+ Q ++ G L +
Sbjct: 480 RQHPHCYVQYMIAIINNCQTFKESIVSLKRKYLKNEVEEGVSPSQPSMD---GILDAIAK 536
Query: 460 HGFDTLLQNLHEDLKPLFKRFTHTRWAAPVETLENIIATVDTRLPEFSELQGCFREELME 519
G LL+ + DL+ +W ++ I TV+ +F++++ +++ +
Sbjct: 537 EGCSGLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVEDYFNDFAKIKKPYKKRMTA 596
Query: 520 ALHLHLVKEYIIQLSKGRLVLKTAEQQQQLAGYILANADTIQHF----CTQHGSPATWLQ 575
H +V EY+ + + R+ ++ E++++ A ++ A+ ++ + G
Sbjct: 597 EAHRRVVVEYLRAVMQKRISFRSPEERKEGAEKMVREAEQLRFLFRKLASGFGEDVDGYC 656
Query: 576 PALPTLAEIIRLQDPSAIKIEVATYATCYPDFSKGHLSAILAIKGNLSNSEVKRIRSILD 635
+ +AE+I+L DPS + +EV+T + YPD H+ A+LA++G+ S + I L+
Sbjct: 657 DTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAVRGDASRDMKQTIMETLE 716
Query: 636 VSMGAQEPSR-PLFSLIKV 653
PS PLF I V
Sbjct: 717 QGPAQASPSYVPLFKDIVV 735
>gi|226371708 exocyst complex component 3-like 2 [Homo sapiens]
Length = 409
Score = 116 bits (290), Expect = 7e-26
Identities = 96/366 (26%), Positives = 167/366 (45%), Gaps = 33/366 (9%)
Query: 299 LQGMGLGSLLPPRQIRLLEATFLSSEAANVRELMDRALELEARRWA--EDVPPQRLDGHC 356
L+ LG LL P +R LE ++ A R + R L+ + W ED P
Sbjct: 4 LENGELGPLLSPGTLRGLEDECVTDVKAQTRAALLRVLQEDEEHWGSLEDQP-------- 55
Query: 357 HSELAIDIIQITSQAQAKAESITLDLGSQIKRVLLVELPAFLRSYQRAFNEFLE----RG 412
S LA D+ ++ + +A I+ + G ++ L L FL+S+Q+ F E R
Sbjct: 56 -SSLAQDVCELLEEHTERAPRISQEFGERMAHCCLGGLAEFLQSFQQRVERFHENPAVRE 114
Query: 413 KQLTNYRANVIANINNCLSFRMSMEQNWQV-PQDTLSLLLGPLGELKSHGFDTLLQNLH- 470
Y + IA +N R E+ +V P ++ P E + D + + H
Sbjct: 115 MLPDTYISKTIALVNCGPPLRALAERLARVGPPES-----EPAREASASALDHVTRLCHR 169
Query: 471 -------EDLKPLFKRFTHTRWAAPVETLENIIATVDTRLPEFSELQGCFREELMEALHL 523
++L+P F + +W + E L+ I+ T+ + +Q + L+ LH
Sbjct: 170 VVANLLFQELQPHFNKLMRRKWLSSPEALDGIVGTLGAQALALRRMQDEPYQALVAELHR 229
Query: 524 HLVKEYIIQLSKGRLVLKTAEQQQQLAGYILANADTIQHFCTQHGSPATWLQPALPTLAE 583
+ EY+ L +GRL +A + ++AG + +A +Q + S A+WL +P LAE
Sbjct: 230 RALVEYVRPLLRGRLRCSSARTRSRVAGRLREDAAQLQRLFRRLESQASWLDAVVPHLAE 289
Query: 584 IIRLQDPSAIKIEVATYATCYPDFSKGHLSAILAIKG---NLSNSEVKRIRSILDVS-MG 639
+++L+D +I++EV YPD + H++A+L I+G + E+ + L++S G
Sbjct: 290 VMQLEDTPSIQVEVGVLVRDYPDIRQKHVAALLDIRGLRNTAARQEILAVARDLELSEEG 349
Query: 640 AQEPSR 645
A P R
Sbjct: 350 ALSPPR 355
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 38.9 bits (89), Expect = 0.015
Identities = 45/173 (26%), Positives = 62/173 (35%), Gaps = 11/173 (6%)
Query: 2 SEASSEDLVPPLEAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAE 61
+ A+S P E GA P E KKKK K + F F K KK+ G+ AE
Sbjct: 127 ASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFS-FKKNKKEAGEGGEAE 185
Query: 62 PEDAAGSRQGLDGPPPTVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVRR 121
A G + G AA E G + E A A G +E +
Sbjct: 186 APAAEGGKDEAAGGAAA-----AAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
Query: 122 QSKVEALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQEREDRQAAAAGPG 174
++ V D+ P + ++ +A A A E +AAGPG
Sbjct: 241 EAAVAPEKPPASDETKAA-EEPSKVEEKKAEEAGASAAACE----APSAAGPG 288
>gi|7656936 zinc finger, HIT domain containing 2 [Homo sapiens]
Length = 403
Score = 38.1 bits (87), Expect = 0.026
Identities = 35/87 (40%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 133 RDQVLGVLRRPLEAPPERLRQALAVVAEQ-EREDRQAAA---AGPGTSGLAATRPRRWLQ 188
RDQVLG LR APP RL AL + +Q E ED A +GP GL+
Sbjct: 47 RDQVLGELRG-CSAPPSRLASALRRLRQQRETEDEPGEAGLSSGPAPGGLSG-------- 97
Query: 189 LWRRGV--AEAAEERMGQRPAAGAEVP 213
LW R +AA ER+ R AG +P
Sbjct: 98 LWERLAPGEKAAFERLLSRGEAGRLLP 124
>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
Length = 555
Score = 37.4 bits (85), Expect = 0.044
Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 26/175 (14%)
Query: 12 PLEAGAAPYREEEEAAKKK-----KEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAA 66
P E + P EEEE A + E+ + KGL +G + G+P+ +PE
Sbjct: 40 PGELESEPEEEEEEQAASQGGTAADEQAEAPKGLTAAEAAGEEGPGEPGRPAEPQPEPEE 99
Query: 67 GSRQGLDGPPPT--------------VEELKAALERGQL--EAARPLLALERELAAAAAA 110
+ G + P EEL+ A E ++ +A+ PL ++ E AAAA
Sbjct: 100 PAEVGAEEPAQPEPGAGPEELEAEAGAEELEQAAEGKEVRFQASLPLTRIDEEEAAAA-- 157
Query: 111 GGVSEEELVRRQSKVEALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQERED 165
E E R + + E E RD R P + + + E ED
Sbjct: 158 ---PEAETERVEGEEEDKEETQRDGAESKERDGEGRPAKSQEEGKRLYGRDEFED 209
>gi|239756693 PREDICTED: similar to coiled-coil domain containing 92
[Homo sapiens]
Length = 272
Score = 36.6 bits (83), Expect = 0.075
Identities = 40/130 (30%), Positives = 54/130 (41%), Gaps = 9/130 (6%)
Query: 83 KAALERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQSKVEALYELLRDQVLGVLRR 142
K E E ALE +L A AAA E+ +R++ V AL LR + RR
Sbjct: 58 KRCSEAASRELESKCRALESQLEARAAANAELRREVAQREALVSALRCSLRTEE----RR 113
Query: 143 PLEAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAATRPRRWLQLWRRGVAEAAEERM 202
LE R +A + E ++ AA + L A R R LQ R G A A +
Sbjct: 114 FLEELRRRSHRATVLGTELQKHTEAAAYL---SCQLHAARQR--LQAPRPGPARAQPAQR 168
Query: 203 GQRPAAGAEV 212
+ P GA +
Sbjct: 169 ARGPGVGARL 178
>gi|157364934 fibrosin [Homo sapiens]
Length = 460
Score = 36.6 bits (83), Expect = 0.075
Identities = 49/184 (26%), Positives = 73/184 (39%), Gaps = 16/184 (8%)
Query: 10 VPPLEAGAAPYREEEEAAKKKKE---KKKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAA 66
V P EA P ++E ++++ K++K + L F++ + + S A P+
Sbjct: 238 VRPPEAARTPGSDKERPVERREPSITKEEKDRDLP-----FSRPQLRV---SPATPK--- 286
Query: 67 GSRQGLDGPPPTVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELV-RRQSKV 125
+R G +GP PT E ++ ER + AA A AAAAAA G L+ R
Sbjct: 287 -ARAGEEGPRPTKESVRVKEERKEEAAAAAAAAAAAAAAAAAAATGPQGLHLLFERPRPP 345
Query: 126 EALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAATRPRR 185
L D+ G L A P RL + E A A GL P
Sbjct: 346 PFLGPSPPDRCAGFLEPTWLAAPPRLARPPRFYEAGEELTGPGAVAAARLYGLEPAHPLL 405
Query: 186 WLQL 189
+ +L
Sbjct: 406 YSRL 409
>gi|12711676 UPF3 regulator of nonsense transcripts homolog A
isoform hUpf3p [Homo sapiens]
Length = 476
Score = 36.2 bits (82), Expect = 0.098
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 29/160 (18%)
Query: 21 REEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPE------DAAGSRQGLDG 74
R EEE KKK+ K+K V K +K +P++ +P+ D G +Q
Sbjct: 257 RREEERCKKKETDKQKKIAEKEVRIKLLKKPEKGEEPTTEKPKERGEEIDTGGGKQESCA 316
Query: 75 PPPTVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQSKVEALYELLRD 134
P G + ARP+ E + +G E V R + E+ E R
Sbjct: 317 P-------------GAVVKARPMEGSLEEPQETSHSGSDKEHRDVERSQEQES--EAQRY 361
Query: 135 QVLGVLRRPLEAPPERLRQALAVVAEQEREDRQAAAAGPG 174
V R PERL + ED Q GPG
Sbjct: 362 HVDDGRRHRAHHEPERL--------SRRSEDEQRWGKGPG 393
>gi|18375525 UPF3 regulator of nonsense transcripts homolog A
isoform hUpf3pdelta [Homo sapiens]
Length = 443
Score = 36.2 bits (82), Expect = 0.098
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 29/160 (18%)
Query: 21 REEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPE------DAAGSRQGLDG 74
R EEE KKK+ K+K V K +K +P++ +P+ D G +Q
Sbjct: 224 RREEERCKKKETDKQKKIAEKEVRIKLLKKPEKGEEPTTEKPKERGEEIDTGGGKQESCA 283
Query: 75 PPPTVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQSKVEALYELLRD 134
P G + ARP+ E + +G E V R + E+ E R
Sbjct: 284 P-------------GAVVKARPMEGSLEEPQETSHSGSDKEHRDVERSQEQES--EAQRY 328
Query: 135 QVLGVLRRPLEAPPERLRQALAVVAEQEREDRQAAAAGPG 174
V R PERL + ED Q GPG
Sbjct: 329 HVDDGRRHRAHHEPERL--------SRRSEDEQRWGKGPG 360
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 35.4 bits (80), Expect = 0.17
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 24/195 (12%)
Query: 21 REEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAAGSRQGLDGPPPTVE 80
+E++ +K +E + + L N TK + + QP +P G R+G G P+ +
Sbjct: 6 KEQDTRLRKLRESSEGDQWLENEK---TKPLRPQQQPQ-CQPAGGTGQRRG-SGSSPSAD 60
Query: 81 ELKAALERGQLEAARPLL----ALERELAAAAAAGGVSEEELVRRQSKVEALYELLRDQV 136
+ + A +R + AA P A +RE AAAA S ++ +++ L+ Q
Sbjct: 61 Q-QGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGHRTEKRKRLQ-----LQCQP 114
Query: 137 LGVL--RRPLEAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAATRPRRWLQLWRRGV 194
G RR + P +Q Q+RE+ AAA P + G T R+ Q RR
Sbjct: 115 AGGTGQRRGSRSSPSADQQRA-----QDREEEAAAAPVPTSRG-HRTEKRKRQQPQRRPA 168
Query: 195 AEAAEER-MGQRPAA 208
+ R G P+A
Sbjct: 169 GGTGQRRGSGSSPSA 183
Score = 30.0 bits (66), Expect = 7.0
Identities = 56/225 (24%), Positives = 78/225 (34%), Gaps = 63/225 (28%)
Query: 11 PPLEAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAAGSRQ 70
P + A REEE AA + + +K+K Q P G R+
Sbjct: 181 PSADQQGAQDREEEAAAAPAPTSRGH------------RTEKRKPQQPQCRPAGGTGQRR 228
Query: 71 GLDGPPPTVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQSKVEALYE 130
G P A +R Q +RE AAAA S ++ +
Sbjct: 229 GSRSSP------SADQQRAQ----------DREEEAAAAPAPTSRGHRTEKRKPQQPQ-- 270
Query: 131 LLRDQVLGVLRRPLEAPPERLRQALAVVAEQE----REDRQAAAAGPGTSGLAATRPRRW 186
RRP +R + A+Q+ RE+ AAA P +SG T R+
Sbjct: 271 ----------RRPAGGTGQRRGSGYSPSADQQGAQDREEEAAAAPAPTSSG-HRTEKRKR 319
Query: 187 LQL---------WRRGVA-------EAAEERMGQRPAAGAEVPES 215
LQL RRG + A++R + AA A VP S
Sbjct: 320 LQLQCQPAGGTGQRRGSGCSSSANQQGAQDR--EEEAAAAPVPTS 362
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 35.4 bits (80), Expect = 0.17
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 32/184 (17%)
Query: 14 EAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPE-----DAAGS 68
E+G R E +A +KKE K+ +G + + K+K + + E D+
Sbjct: 784 ESGNDEARVEGQATDEKKEPKEPREGGG---AIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
Query: 69 RQGLDGPPPTVEELKAALERGQLEAARPLLALERE-----------------LAAAAAAG 111
+ DG P E + + GQ E + ++ E E AAA AA
Sbjct: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
Query: 112 GVSEEELVR-RQSKVEALYELLRDQVLGVLR------RPLEAPPERLRQALAVVAEQERE 164
V + L + K+++L LL + + L LE +R R+AL +Q
Sbjct: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
Query: 165 DRQA 168
DRQA
Sbjct: 961 DRQA 964
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 35.4 bits (80), Expect = 0.17
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 32/184 (17%)
Query: 14 EAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPE-----DAAGS 68
E+G R E +A +KKE K+ +G + + K+K + + E D+
Sbjct: 753 ESGNDEARVEGQATDEKKEPKEPREGGG---AIEEEAKEKTSEAPKKDEEKGKEGDSEKE 809
Query: 69 RQGLDGPPPTVEELKAALERGQLEAARPLLALERE-----------------LAAAAAAG 111
+ DG P E + + GQ E + ++ E E AAA AA
Sbjct: 810 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 869
Query: 112 GVSEEELVR-RQSKVEALYELLRDQVLGVLR------RPLEAPPERLRQALAVVAEQERE 164
V + L + K+++L LL + + L LE +R R+AL +Q
Sbjct: 870 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 929
Query: 165 DRQA 168
DRQA
Sbjct: 930 DRQA 933
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 35.4 bits (80), Expect = 0.17
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 32/184 (17%)
Query: 14 EAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPE-----DAAGS 68
E+G R E +A +KKE K+ +G + + K+K + + E D+
Sbjct: 784 ESGNDEARVEGQATDEKKEPKEPREGGG---AIEEEAKEKTSEAPKKDEEKGKEGDSEKE 840
Query: 69 RQGLDGPPPTVEELKAALERGQLEAARPLLALERE-----------------LAAAAAAG 111
+ DG P E + + GQ E + ++ E E AAA AA
Sbjct: 841 SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA 900
Query: 112 GVSEEELVR-RQSKVEALYELLRDQVLGVLR------RPLEAPPERLRQALAVVAEQERE 164
V + L + K+++L LL + + L LE +R R+AL +Q
Sbjct: 901 AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA 960
Query: 165 DRQA 168
DRQA
Sbjct: 961 DRQA 964
>gi|110611218 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 35.0 bits (79), Expect = 0.22
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 10/188 (5%)
Query: 52 KKKGQPSSAEPEDAAGSRQGLDGPPPTVEELKAALERGQLEAARPLLALERELAAAAAAG 111
++K + + E EDAA ++ L + KA G+ + + L+A E+E+ A A
Sbjct: 270 EEKEKLLATEQEDAAVAKSKLRELNKEMAAEKAKAAAGEAKVKKQLVAREQEITAVQARM 329
Query: 112 GVSEEELVRR----QSKVEALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQEREDRQ 167
S E V+ Q K+ L E L + L R L+ LR AL Q +
Sbjct: 330 QASYREHVKEVQQLQGKIRTLQEQLENGPNTQLAR-LQQENSILRDALNQATSQVESKQN 388
Query: 168 AAAAGPGTSGLAATRPRRWLQLWRRGVAEAAEERMGQRPAAGAEVPESVFLHLGRTMKED 227
A A L + +L + A +E+ + A A E L L + +E
Sbjct: 389 AELA-----KLRQELSKVSKELVEKSEAVRQDEQQRKALEAKAAAFEKQVLQLQASHRES 443
Query: 228 LEAVVERL 235
EA+ +RL
Sbjct: 444 EEALQKRL 451
>gi|110611220 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 35.0 bits (79), Expect = 0.22
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 10/188 (5%)
Query: 52 KKKGQPSSAEPEDAAGSRQGLDGPPPTVEELKAALERGQLEAARPLLALERELAAAAAAG 111
++K + + E EDAA ++ L + KA G+ + + L+A E+E+ A A
Sbjct: 270 EEKEKLLATEQEDAAVAKSKLRELNKEMAAEKAKAAAGEAKVKKQLVAREQEITAVQARM 329
Query: 112 GVSEEELVRR----QSKVEALYELLRDQVLGVLRRPLEAPPERLRQALAVVAEQEREDRQ 167
S E V+ Q K+ L E L + L R L+ LR AL Q +
Sbjct: 330 QASYREHVKEVQQLQGKIRTLQEQLENGPNTQLAR-LQQENSILRDALNQATSQVESKQN 388
Query: 168 AAAAGPGTSGLAATRPRRWLQLWRRGVAEAAEERMGQRPAAGAEVPESVFLHLGRTMKED 227
A A L + +L + A +E+ + A A E L L + +E
Sbjct: 389 AELA-----KLRQELSKVSKELVEKSEAVRQDEQQRKALEAKAAAFEKQVLQLQASHRES 443
Query: 228 LEAVVERL 235
EA+ +RL
Sbjct: 444 EEALQKRL 451
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 35.0 bits (79), Expect = 0.22
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 18 APYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAAGSRQGLDGPPP 77
A RE+EE K+++E+KKK + + ++++ A+ E+ +Q L+
Sbjct: 813 AEKREQEEKKKQEEEEKKKREEEER-----ERERERREAELRAQQEEETRKQQELE---- 863
Query: 78 TVEELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQSKVEALYELLRDQVL 137
AL++ Q EA L REL V EE++R + ++E L + Q L
Sbjct: 864 -------ALQKSQKEA-----ELTRELEKQKENKQV--EEILRLEKEIEDLQRMKEQQEL 909
Query: 138 GVLRRPLEAPPERLRQALAVVAEQ 161
+ L+ ER Q L + E+
Sbjct: 910 SLTEASLQKLQERRDQELRRLEEE 933
>gi|68989256 ras inhibitor RIN1 [Homo sapiens]
Length = 783
Score = 35.0 bits (79), Expect = 0.22
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 55 GQPSSAEPEDAAGSRQGLDGPPPTVEEL--KAALERGQLEAARPLLALERELAAAAAAGG 112
G PSS+E E GSR G P T L + L R A LLA ER++ AAAA
Sbjct: 317 GSPSSSEEEGVPGSR----GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAA-- 370
Query: 113 VSEEELVRRQSKVEALYELLRDQVLGVLRRPLEAPPERLRQALA 156
Q + A +L++D + V P + +RQAL+
Sbjct: 371 -------LMQDRHTAAGQLVQDLLTQVRAGPEPQELQGIRQALS 407
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 35.0 bits (79), Expect = 0.22
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 34 KKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAAGSRQGLDGPPPTVEELKAALERGQLEA 93
+++ L +VF +G++ + +P + P AA PPP A +
Sbjct: 29 RRRRLTLHSVFSASARGRRARAKPQAEPPPPAAQ-------PPPAPAPAAAQGPPPEALP 81
Query: 94 ARPLLALERELAAAAAAGGVSEEE 117
A P E E AAAAA G +EE
Sbjct: 82 AEPAAEAEAEAAAAAAEPGFDDEE 105
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 35.0 bits (79), Expect = 0.22
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 34 KKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAAGSRQGLDGPPPTVEELKAALERGQLEA 93
+++ L +VF +G++ + +P + P AA PPP A +
Sbjct: 29 RRRRLTLHSVFSASARGRRARAKPQAEPPPPAAQ-------PPPAPAPAAAQGPPPEALP 81
Query: 94 ARPLLALERELAAAAAAGGVSEEE 117
A P E E AAAAA G +EE
Sbjct: 82 AEPAAEAEAEAAAAAAEPGFDDEE 105
>gi|122937416 hypothetical protein LOC85452 [Homo sapiens]
Length = 762
Score = 34.7 bits (78), Expect = 0.28
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 80 EELKAALERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQSKVEALYEL-LRDQ-VL 137
EE++A R Q+ AA L E+E A G V L+R + + EL LR Q +L
Sbjct: 189 EEVEATGRRLQVRAAEQLCR-EQE-----ALGKVERNRLLRIRKSLNTQKELGLRHQKLL 242
Query: 138 GVLRRPLEAPPERLRQALAVVAEQERED---------RQAAAAGPGTSGLAATRPR-RWL 187
R+ + L+ +L + EQE+++ R+ A ++A R R
Sbjct: 243 EDARKNHKVAVRFLKASLGRIREQEKKEEMECHEYMRRRMDAVVALKGSISANRDTLRKF 302
Query: 188 QLWRRGVAEAAEERMGQRPAAGAEVPESVFLHL-GRTMKEDLEA 230
Q W R AE AE+R+ A F HL + +++LEA
Sbjct: 303 QAWDRAKAELAEQRVQAEKKAILAQGRDAFRHLVHQRRRQELEA 346
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 34.7 bits (78), Expect = 0.28
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 8/192 (4%)
Query: 23 EEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAAGSRQGLDGPPPTVEEL 82
++ A+ ++EK +K A + + +KKK + + E E ++ L +EE
Sbjct: 303 QQMKAQAREEKHQKQMERAML-----ENEKKKREMAEKEKEKIEREKEELMERLKQIEEQ 357
Query: 83 KAALERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQSKVEALYELLRDQVLGVLRR 142
++ E R L LE+E A + +E + EAL + RDQ +
Sbjct: 358 TKKAQQELEEQTRRALELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQL 417
Query: 143 PLEAPPERLRQALAVVAEQEREDRQA---AAAGPGTSGLAATRPRRWLQLWRRGVAEAAE 199
LE R + +A Q++E A L TR + VAE AE
Sbjct: 418 ALEMAELTARISQLEMARQKKESEAVEWQQKAQMVQEDLEKTRAELKTAMSTPHVAEPAE 477
Query: 200 ERMGQRPAAGAE 211
++ GAE
Sbjct: 478 NEQDEQDENGAE 489
>gi|5803092 methionyl aminopeptidase 2 [Homo sapiens]
Length = 478
Score = 34.7 bits (78), Expect = 0.28
Identities = 31/82 (37%), Positives = 39/82 (47%), Gaps = 31/82 (37%)
Query: 14 EAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSA---EPEDAAGSRQ 70
E GAA EEAAKKK+ KKKKSKG PS+A EP+ +G+
Sbjct: 24 EEGAAS--TAEEAAKKKRRKKKKSKG-----------------PSAAGEQEPDKESGA-- 62
Query: 71 GLDGPPPTVEELKAALERGQLE 92
+V+E+ LER LE
Sbjct: 63 -------SVDEVARQLERSALE 77
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 34.7 bits (78), Expect = 0.28
Identities = 60/230 (26%), Positives = 84/230 (36%), Gaps = 48/230 (20%)
Query: 51 KKKKGQPSSAEPEDAAGSRQGLDGPPPTVE--ELKAALE-----------RGQLEAARPL 97
K +PSS + E+ G QGLD E E LE + + E A +
Sbjct: 649 KPGPSEPSSVQLEEQEGPNQGLDLATGQAEAREHDQRLEGTVRDPAWQKPQQKSEGALEV 708
Query: 98 LALERELAAAAAAGGVSEEELVRRQ-----SKVEALYELLRDQVLGV------------- 139
E + + A GV+E+E +R + K EAL + L Q +
Sbjct: 709 QVWEGPIPGESLASGVAEQEALREEVAQLRRKAEALGDELEAQARKLEAQNTEAARLSKE 768
Query: 140 LRRPLEAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAATRPR---------RWLQLW 190
L + A E R+A A EQ R AAG + R R + W
Sbjct: 769 LAQARRAEAEAHREAEAQAWEQARLREAVEAAGQELESASQEREALVEALAAAGRERRQW 828
Query: 191 R------RGVAEAAEERMGQRPAAGAEVPESVFLHLGRTMKEDLEAVVER 234
R +EAAEERM + G + E R KE L+A +E+
Sbjct: 829 EREGSRLRAQSEAAEERMQVLESEGRQHLEEA--ERERREKEALQAELEK 876
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 34.7 bits (78), Expect = 0.28
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 19/184 (10%)
Query: 22 EEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAAGSRQGLDGPPPTVEE 81
EE + +K+ + + K+S F+ + SS + DA Q L+ P V
Sbjct: 413 EETKLSKENQTRAKESD--------FSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSL 464
Query: 82 LKAALERGQ--LEAARPLLALERELAAAAAAGGVSEEELVRRQSKVEALYELLRDQVLGV 139
LK L+ Q +EA + + L +EL A S+++ Q+ +E + R+QV
Sbjct: 465 LKDDLQGAQSEIEAKQEIQHLRKELIEAQELARTSKQKCFELQALLEEERKAYRNQVEES 524
Query: 140 LR--RPLEAPPERLRQALAVVAEQEREDRQAAAAGPGTSGLAATRPRRWLQLWRRGVAEA 197
+ + L+A +RL + E RE++ + L+A R + L + A+
Sbjct: 525 TKQIQVLQAQLQRLH----IDTENLREEKDSEITSTRDELLSA---RDEILLLHQAAAKV 577
Query: 198 AEER 201
A ER
Sbjct: 578 ASER 581
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 34.3 bits (77), Expect = 0.37
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Query: 4 ASSEDLVPPLEAGAAPYREEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPE 63
A++E+ P E+ E EA + K++ + ++G A K + AEPE
Sbjct: 29 AATEEEGTPKESEPQAAAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPE 88
Query: 64 DAAGSRQGLDGPPPTVEELKAA---LERGQLEAARPLLALERELAAAAAAGGVSEEE 117
G+ + PP E+ +AA G+ A A E AA AA S+EE
Sbjct: 89 KTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEE 145
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 33.9 bits (76), Expect = 0.49
Identities = 48/157 (30%), Positives = 66/157 (42%), Gaps = 28/157 (17%)
Query: 22 EEEEAAKKKKEKKKKSKGLANVFCVFTKGKKKKGQPSSAEPEDAAGSRQGLDGPPPTVEE 81
EE +A KK E ++ S LAN K++ E A G G E
Sbjct: 1220 EELRSAVKKAESERISLKLANE-------DKEQKLALLEEARTAVGKEAG---------E 1263
Query: 82 LKAAL---ERGQLEAARPLLALERELAAAAAAGGVSEEELVRRQSKV---EALYELLRDQ 135
L+ L ER +LEA R L L R++ + EL Q ++ E + R +
Sbjct: 1264 LRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRE 1323
Query: 136 VLGVLRRPL--EAPPERLRQALAV----VAEQEREDR 166
LG+ +R L EA E +RQ L V + EQE E R
Sbjct: 1324 TLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFR 1360
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 33.9 bits (76), Expect = 0.49
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 51 KKKKGQPSSAEPEDAAGSRQGLDGPPPTVEELKAALERGQLEAARPLLALERELAAAA-- 108
+ K+GQ SS+ AA + + P VEE K L + +LEA + LE LAAAA
Sbjct: 609 ESKEGQESSSS---AANTNPAVAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAARE 665
Query: 109 ----AAGGVSEEELVRRQSKVEALYELLRDQVLGVLRRPL-EAPPERLRQALAVVAE 160
A+ E++L + + AL+ L L+ PL EA ++ ++ V E
Sbjct: 666 KLAQASKESKEKQLQAERKRKAALF-------LQTLKNPLPEAEAGKIEESPFSVEE 715
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,927,384
Number of Sequences: 37866
Number of extensions: 1132881
Number of successful extensions: 6225
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 6001
Number of HSP's gapped (non-prelim): 320
length of query: 654
length of database: 18,247,518
effective HSP length: 109
effective length of query: 545
effective length of database: 14,120,124
effective search space: 7695467580
effective search space used: 7695467580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.