Guide to the Human Genome
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Name: ZNHIT2 Sequence: fasta or formatted (403aa) NCBI GI: 7656936
Description:

zinc finger, HIT domain containing 2

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.6         63           3
 C cysteine            3.0         12           1
 D aspartate           3.2         13           2
 E glutamate           8.4         34           2
 F phenylalanine       2.0          8           1
 G glycine             9.4         38           2
 H histidine           2.2          9           1
 I isoleucine          1.0          4           1
 K lysine              1.5          6           2
 L leucine            12.7         51           2
 M methionine          0.5          2           1
 N asparagine          2.0          8           1
 P proline             9.4         38           2
 Q glutamine           3.5         14           2
 R arginine            8.2         33           2
 S serine              4.5         18           2
 T threonine           4.2         17           1
 V valine              5.0         20           2
 W tryptophan          1.7          7           3
 Y tyrosine            2.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, HIT domain containing 2 
MAPK7                 0.017   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.017   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.017   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.017   mitogen-activated protein kinase 7 isoform 2 
TNFAIP2               0.016   tumor necrosis factor, alpha-induced protein 2 [Homo...
DDN                   0.015   dendrin 
PLXNB1                0.014   plexin B1 
PLXNB1                0.014   plexin B1 
ZNHIT3                0.014   thyroid hormone receptor interactor 3 
CCDC142               0.014   coiled-coil domain containing 142 
ZNHIT1                0.012   zinc finger, HIT domain containing 1 
SIX5                  0.012   sine oculis homeobox homolog 5 
CD248                 0.012   tumor endothelial marker 1 precursor 
NOVA2                 0.012   neuro-oncological ventral antigen 2 
LOC100128572          0.011   PREDICTED: hypothetical protein 
LOC100128572          0.011   PREDICTED: hypothetical protein 
LOC100128572          0.011   PREDICTED: hypothetical protein 
UNK                   0.011   zinc finger CCCH-type domain containing 5 
NBEAL2                0.010   neurobeachin-like 2 
INO80B                0.010   high mobility group AT-hook 1-like 4 
LOC389813             0.010   similar to CG15216-PA 
ZXDB                  0.009   zinc finger, X-linked, duplicated B 
TUBGCP6               0.009   tubulin, gamma complex associated protein 6 
ZNHIT6                0.009   zinc finger, HIT type 6 
COL3A1                0.007   collagen type III alpha 1 preproprotein 
LOC100292572          0.007   PREDICTED: hypothetical protein 
ZFPM1                 0.007   zinc finger protein, multitype 1 
GIGYF1                0.007   PERQ amino acid rich, with GYF domain 1 
TBC1D2                0.007   TBC1 domain family, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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