SKP1 24154

Name: SKP1	Sequence: fasta or formatted (160aa)		NCBI GI: 25777711
Description: S-phase kinase-associated protein 1 isoform a		Referenced in: Cullins and SCF Complexes Cyclins and Related Functions RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [163aa] S-phase kinase-associated protein 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 7 2 C cysteine 1.9 3 1 D aspartate 11.9 19 3 E glutamate 10.0 16 4 F phenylalanine 3.8 6 1 G glycine 4.4 7 1 H histidine 1.2 2 2 I isoleucine 7.5 12 1 K lysine 9.4 15 2 L leucine 8.1 13 2 M methionine 2.5 4 1 N asparagine 4.4 7 1 P proline 6.2 10 4 Q glutamine 4.4 7 1 R arginine 1.2 2 1 S serine 3.1 5 2 T threonine 6.9 11 1 V valine 6.9 11 1 W tryptophan 1.2 2 1 Y tyrosine 0.6 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 S-phase kinase-associated protein 1 isoform a SKP1 0.951 S-phase kinase-associated protein 1 isoform b LOC728622 0.842 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.842 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.842 PREDICTED: similar to S-phase kinase-associated pro... LOC100293583 0.632 PREDICTED: similar to S-phase kinase-associated pro... LOC100291182 0.632 PREDICTED: hypothetical protein XP_002346652 LOC100288962 0.632 PREDICTED: hypothetical protein XP_002342489 TCEB1 0.043 elongin C LOC100132973 0.039 PREDICTED: similar to elongin C LOC100132973 0.039 PREDICTED: similar to elongin C LOC100132973 0.039 PREDICTED: similar to elongin C LOC100287778 0.033 PREDICTED: hypothetical protein XP_002342145 LOC100293395 0.030 PREDICTED: similar to elongin C LOC727788 0.030 PREDICTED: similar to elongin C MAP1B 0.026 microtubule-associated protein 1B SF3A1 0.016 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... SF3A1 0.016 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... LOC65998 0.013 hypothetical protein LOC65998 RB1 0.013 retinoblastoma 1 UNC13A 0.013 unc-13 homolog A C3orf37 0.013 hypothetical protein LOC56941 C3orf37 0.013 hypothetical protein LOC56941 MBD1 0.013 methyl-CpG binding domain protein 1 isoform 2 MBD1 0.013 methyl-CpG binding domain protein 1 isoform 4 FAM114A2 0.013 hypothetical protein LOC10827 BNIP2 0.010 BCL2/adenovirus E1B 19kD interacting protein 2 [Hom... HEBP1 0.010 heme binding protein 1 MAP1A 0.010 microtubule-associated protein 1A MLL4 0.010 myeloid/lymphoid or mixed-lineage leukemia 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.