LOC100132973 8879

Name: LOC100132973	Sequence: fasta or formatted (115aa)		NCBI GI: 169213526
Description: PREDICTED: similar to elongin C		Not currently referenced in the text
Other entries for this name: alt mRNA {115aa} PREDICTED: similar to elongin C alt mRNA {115aa} PREDICTED: similar to elongin C
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 11 2 C cysteine 2.6 3 1 D aspartate 4.3 5 1 E glutamate 10.4 12 1 F phenylalanine 5.2 6 1 G glycine 7.0 8 2 H histidine 2.6 3 1 I isoleucine 5.2 6 1 K lysine 7.0 8 2 L leucine 8.7 10 2 M methionine 4.3 5 1 N asparagine 2.6 3 1 P proline 5.2 6 1 Q glutamine 0.9 1 1 R arginine 2.6 3 1 S serine 6.1 7 2 T threonine 3.5 4 1 V valine 7.0 8 1 W tryptophan 0.0 0 0 Y tyrosine 5.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to elongin C LOC100132973 1.000 PREDICTED: similar to elongin C LOC100132973 1.000 PREDICTED: similar to elongin C TCEB1 0.862 elongin C LOC727788 0.643 PREDICTED: similar to elongin C LOC100293395 0.643 PREDICTED: similar to elongin C LOC100287778 0.638 PREDICTED: hypothetical protein XP_002342145 LOC100290177 0.462 PREDICTED: hypothetical protein XP_002347928 LOC100287483 0.462 PREDICTED: hypothetical protein XP_002344195 LOC100292879 0.419 PREDICTED: similar to fos39347_1 LOC652636 0.252 PREDICTED: similar to elongin C SKP1 0.057 S-phase kinase-associated protein 1 isoform b SKP1 0.057 S-phase kinase-associated protein 1 isoform a LOC728622 0.057 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.057 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.057 PREDICTED: similar to S-phase kinase-associated pro... LOC100293583 0.033 PREDICTED: similar to S-phase kinase-associated pro... LOC100291182 0.033 PREDICTED: hypothetical protein XP_002346652 LOC100288962 0.033 PREDICTED: hypothetical protein XP_002342489 NEK4 0.010 NIMA-related kinase 4 ACCN5 0.010 amiloride-sensitive cation channel 5, intestinal [Ho... DQX1 0.005 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo... LOC100290496 0.005 PREDICTED: hypothetical protein XP_002348126 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.