LOC100293395 21396

Name: LOC100293395	Sequence: fasta or formatted (269aa)		NCBI GI: 239752879
Description: PREDICTED: similar to elongin C		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 18 2 C cysteine 3.0 8 1 D aspartate 4.1 11 2 E glutamate 7.4 20 1 F phenylalanine 3.0 8 1 G glycine 8.6 23 3 H histidine 2.6 7 1 I isoleucine 4.5 12 1 K lysine 7.1 19 2 L leucine 9.3 25 2 M methionine 3.3 9 1 N asparagine 2.6 7 1 P proline 4.5 12 1 Q glutamine 2.2 6 1 R arginine 4.1 11 2 S serine 10.8 29 3 T threonine 5.2 14 1 V valine 7.4 20 2 W tryptophan 0.7 2 1 Y tyrosine 3.0 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to elongin C LOC727788 1.000 PREDICTED: similar to elongin C LOC100287778 0.948 PREDICTED: hypothetical protein XP_002342145 TCEB1 0.291 elongin C LOC100132973 0.262 PREDICTED: similar to elongin C LOC100132973 0.262 PREDICTED: similar to elongin C LOC100132973 0.262 PREDICTED: similar to elongin C LOC100290177 0.130 PREDICTED: hypothetical protein XP_002347928 LOC100287483 0.130 PREDICTED: hypothetical protein XP_002344195 LOC100292879 0.118 PREDICTED: similar to fos39347_1 LOC652636 0.089 PREDICTED: similar to elongin C SKP1 0.017 S-phase kinase-associated protein 1 isoform b SKP1 0.017 S-phase kinase-associated protein 1 isoform a LOC728622 0.016 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.016 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.016 PREDICTED: similar to S-phase kinase-associated pro... ZNF670 0.014 zinc finger protein 670 PPM1A 0.010 protein phosphatase 1A isoform 1 PPM1A 0.010 protein phosphatase 1A isoform 2 PPM1A 0.010 protein phosphatase 1A isoform 3 LOC441617 0.010 PREDICTED: similar to hCG1820409 LOC441617 0.010 PREDICTED: similar to hCG1820409 LOC441617 0.010 PREDICTED: similar to hCG1820409 SIRT3 0.010 sirtuin 3 isoform a LOC649330 0.008 PREDICTED: heterogeneous nuclear ribonucleoprotein ... LOC652665 0.008 PREDICTED: similar to heterogeneous nuclear ribonuc... LOC649330 0.008 heterogeneous nuclear ribonucleoprotein C-like [Hom... LEPR 0.008 leptin receptor isoform 3 LEPR 0.008 leptin receptor isoform 2 LEPR 0.008 leptin receptor isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.