TCEB1 31550

Name: TCEB1	Sequence: fasta or formatted (112aa)		NCBI GI: 5032161
Description: elongin C		Referenced in: Cullins and SCF Complexes RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 8 2 C cysteine 2.7 3 1 D aspartate 3.6 4 1 E glutamate 11.6 13 2 F phenylalanine 5.4 6 1 G glycine 7.1 8 2 H histidine 2.7 3 1 I isoleucine 6.2 7 1 K lysine 5.4 6 1 L leucine 7.1 8 2 M methionine 4.5 5 1 N asparagine 4.5 5 1 P proline 5.4 6 1 Q glutamine 0.9 1 1 R arginine 2.7 3 1 S serine 7.1 8 2 T threonine 6.2 7 1 V valine 5.4 6 1 W tryptophan 0.0 0 0 Y tyrosine 4.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 elongin C LOC100132973 0.879 PREDICTED: similar to elongin C LOC100132973 0.879 PREDICTED: similar to elongin C LOC100132973 0.879 PREDICTED: similar to elongin C LOC727788 0.733 PREDICTED: similar to elongin C LOC100293395 0.728 PREDICTED: similar to elongin C LOC100287778 0.723 PREDICTED: hypothetical protein XP_002342145 LOC100290177 0.524 PREDICTED: hypothetical protein XP_002347928 LOC100287483 0.524 PREDICTED: hypothetical protein XP_002344195 LOC100292879 0.485 PREDICTED: similar to fos39347_1 LOC652636 0.330 PREDICTED: similar to elongin C SKP1 0.063 S-phase kinase-associated protein 1 isoform b SKP1 0.063 S-phase kinase-associated protein 1 isoform a LOC728622 0.063 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.063 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.063 PREDICTED: similar to S-phase kinase-associated pro... LOC100293583 0.034 PREDICTED: similar to S-phase kinase-associated pro... LOC100291182 0.034 PREDICTED: hypothetical protein XP_002346652 LOC100288962 0.034 PREDICTED: hypothetical protein XP_002342489 SMOC1 0.015 secreted modular calcium-binding protein 1 isoform 1... SMOC1 0.015 secreted modular calcium-binding protein 1 isoform 2... LOC100290496 0.010 PREDICTED: hypothetical protein XP_002348126 DQX1 0.010 DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo... RICS 0.005 Rho GTPase-activating protein isoform 1 SMOC2 0.005 SPARC related modular calcium binding 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.