LOC100287778 16787

Name: LOC100287778	Sequence: fasta or formatted (287aa)		NCBI GI: 239741256
Description: PREDICTED: hypothetical protein XP_002342145		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 21 2 C cysteine 2.8 8 1 D aspartate 3.8 11 2 E glutamate 7.7 22 1 F phenylalanine 3.1 9 1 G glycine 10.8 31 3 H histidine 2.4 7 1 I isoleucine 4.5 13 1 K lysine 7.0 20 2 L leucine 8.0 23 2 M methionine 3.1 9 1 N asparagine 2.8 8 1 P proline 3.8 11 1 Q glutamine 2.1 6 1 R arginine 4.9 14 2 S serine 9.8 28 3 T threonine 4.5 13 1 V valine 7.7 22 2 W tryptophan 1.0 3 1 Y tyrosine 2.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342145 LOC727788 0.883 PREDICTED: similar to elongin C LOC100293395 0.881 PREDICTED: similar to elongin C TCEB1 0.268 elongin C LOC100132973 0.241 PREDICTED: similar to elongin C LOC100132973 0.241 PREDICTED: similar to elongin C LOC100132973 0.241 PREDICTED: similar to elongin C LOC100290177 0.119 PREDICTED: hypothetical protein XP_002347928 LOC100287483 0.119 PREDICTED: hypothetical protein XP_002344195 LOC100292879 0.106 PREDICTED: similar to fos39347_1 LOC652636 0.083 PREDICTED: similar to elongin C SKP1 0.018 S-phase kinase-associated protein 1 isoform b SKP1 0.018 S-phase kinase-associated protein 1 isoform a LOC728622 0.014 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.014 PREDICTED: similar to S-phase kinase-associated pro... LOC728622 0.014 PREDICTED: similar to S-phase kinase-associated pro... KRT9 0.013 keratin 9 KRT77 0.009 keratin 77 KRT10 0.009 keratin 10 LOC649330 0.007 PREDICTED: heterogeneous nuclear ribonucleoprotein ... LOC100128131 0.007 PREDICTED: hypothetical protein LOC652665 0.007 PREDICTED: similar to heterogeneous nuclear ribonuc... LOC100128131 0.007 PREDICTED: hypothetical protein LOC100128131 0.007 PREDICTED: hypothetical protein LOC649330 0.007 heterogeneous nuclear ribonucleoprotein C-like [Hom... HHIP 0.007 hedgehog-interacting protein PPM1A 0.007 protein phosphatase 1A isoform 1 PPM1A 0.007 protein phosphatase 1A isoform 2 PPM1A 0.007 protein phosphatase 1A isoform 3 KLHL28 0.005 BTB (POZ) domain containing 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.