Guide to the Human Genome
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Name: C3orf37 Sequence: fasta or formatted (354aa) NCBI GI: 54607104
Description:

hypothetical protein LOC56941

Referenced in:

Additional Conserved Proteins

Other entries for this name:
alt mRNA [354aa] hypothetical protein LOC56941
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         17           2
 C cysteine            2.8         10           1
 D aspartate           5.6         20           1
 E glutamate           7.3         26           3
 F phenylalanine       3.1         11           1
 G glycine             5.1         18           2
 H histidine           1.7          6           2
 I isoleucine          3.4         12           2
 K lysine              7.3         26           2
 L leucine             7.9         28           2
 M methionine          1.7          6           1
 N asparagine          3.4         12           2
 P proline             7.3         26           2
 Q glutamine           5.4         19           2
 R arginine            6.8         24           2
 S serine              9.6         34           2
 T threonine           5.1         18           2
 V valine              5.6         20           2
 W tryptophan          3.4         12           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC56941 
C3orf37               1.000   hypothetical protein LOC56941 
RSF1                  0.011   remodeling and spacing factor 1 
LRRC59                0.011   leucine rich repeat containing 59 
MRPL45                0.010   mitochondrial ribosomal protein L45 
NEFH                  0.008   neurofilament, heavy polypeptide 200kDa 
JHDM1D                0.007   jumonji C domain containing histone demethylase 1 ho...
TNKS1BP1              0.007   tankyrase 1-binding protein 1 
SIM1                  0.006   single-minded homolog 1 
MAPKAPK5              0.006   MAP kinase-activated protein kinase 5 isoform 2 [Hom...
MAPKAPK5              0.006   MAP kinase-activated protein kinase 5 isoform 1 [Hom...
SKP1                  0.006   S-phase kinase-associated protein 1 isoform b 
SKP1                  0.006   S-phase kinase-associated protein 1 isoform a 
ZAN                   0.006   zonadhesin isoform 3 
ZAN                   0.006   zonadhesin isoform 6 
PARD3                 0.006   partitioning-defective protein 3 homolog 
KIF1B                 0.006   kinesin family member 1B isoform alpha 
CDK8                  0.004   cyclin-dependent kinase 8 
FZD8                  0.004   frizzled 8 
CDC2L6                0.004   cell division cycle 2-like 6 (CDK8-like) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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