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Search of human proteins with 25777615
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|25777615 proteasome 26S non-ATPase subunit 7 [Homo sapiens]
(324 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|25777615 proteasome 26S non-ATPase subunit 7 [Homo sapiens] 645 0.0
gi|169161813 PREDICTED: similar to hCG1644176 [Homo sapiens] 292 3e-79
gi|169162584 PREDICTED: hypothetical protein LOC100132108 [Homo ... 290 2e-78
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 117 2e-26
gi|34147637 COP9 signalosome subunit 6 [Homo sapiens] 107 1e-23
gi|38027923 COP9 signalosome subunit 5 [Homo sapiens] 45 9e-05
gi|5031981 proteasome 26S subunit, non-ATPase 14 [Homo sapiens] 45 9e-05
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 44 3e-04
gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [H... 44 3e-04
gi|4503515 eukaryotic translation initiation factor 3, subunit 3... 44 3e-04
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|4557509 cylicin 2 [Homo sapiens] 42 6e-04
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 42 7e-04
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 42 7e-04
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 42 0.001
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 42 0.001
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 42 0.001
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 41 0.002
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 40 0.002
gi|221219020 NYD-SP11 protein [Homo sapiens] 40 0.003
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 40 0.004
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 39 0.005
gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... 39 0.005
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 39 0.005
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 39 0.005
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 39 0.005
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 39 0.006
>gi|25777615 proteasome 26S non-ATPase subunit 7 [Homo sapiens]
Length = 324
Score = 645 bits (1665), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MPELAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE 60
MPELAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE
Sbjct: 1 MPELAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE 60
Query: 61 DDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSV 120
DDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSV
Sbjct: 61 DDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSV 120
Query: 121 LVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIK 180
LVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIK
Sbjct: 121 LVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIK 180
Query: 181 DTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDV 240
DTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDV
Sbjct: 181 DTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDV 240
Query: 241 SLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKDR 300
SLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKDR
Sbjct: 241 SLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKDR 300
Query: 301 KEDKEKDKDKEKSDVKKEEKKEKK 324
KEDKEKDKDKEKSDVKKEEKKEKK
Sbjct: 301 KEDKEKDKDKEKSDVKKEEKKEKK 324
>gi|169161813 PREDICTED: similar to hCG1644176 [Homo sapiens]
Length = 194
Score = 292 bits (747), Expect = 3e-79
Identities = 153/197 (77%), Positives = 167/197 (84%), Gaps = 4/197 (2%)
Query: 46 KVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKND 105
KVLDVS+SF VPF+EDDKD+ FL HDYL+N Y MFK+VNARERIV WYH GPKLHKND
Sbjct: 2 KVLDVSSSFTVPFNEDDKDNC--FLAHDYLKNTYRMFKRVNARERIVEWYHIGPKLHKND 59
Query: 106 IAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAE 165
A NE+MKRYC NSVLV D+KPKDLGLPTEAYISVE V++DGT KTFEHVTSE GAE
Sbjct: 60 TAFNEIMKRYCRNSVLVTSDMKPKDLGLPTEAYISVE-VYEDGTSALKTFEHVTSETGAE 118
Query: 166 EAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQ 225
EA+E+GV+HLL+DIKDTTVGTLSQ ITNQV LKGLNSKLL RSYLEKVATGKL NHQ
Sbjct: 119 EAKEIGVKHLLQDIKDTTVGTLSQCITNQVLDLKGLNSKLLGTRSYLEKVATGKLSTNHQ 178
Query: 226 IIYQLQDVFNLLPDVSL 242
IYQLQ VF LLP +SL
Sbjct: 179 FIYQLQ-VFKLLPVISL 194
>gi|169162584 PREDICTED: hypothetical protein LOC100132108 [Homo
sapiens]
Length = 194
Score = 290 bits (741), Expect = 2e-78
Identities = 152/197 (77%), Positives = 166/197 (84%), Gaps = 4/197 (2%)
Query: 46 KVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKND 105
KVLDVS+SF VPF+EDDKD+ FL HDYL+N Y MFK+VNARERIV WYH GPKLHKND
Sbjct: 2 KVLDVSSSFTVPFNEDDKDNC--FLAHDYLKNTYRMFKRVNARERIVEWYHIGPKLHKND 59
Query: 106 IAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAE 165
A NE+MKRYC NSVLV D+KPKDLGLPTEAYISVE V++DGT KTFEHVTSE AE
Sbjct: 60 TAFNEIMKRYCRNSVLVTSDMKPKDLGLPTEAYISVE-VYEDGTSALKTFEHVTSETAAE 118
Query: 166 EAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQ 225
EA+E+GV+HLL+DIKDTTVGTLSQ ITNQV LKGLNSKLL RSYLEKVATGKL NHQ
Sbjct: 119 EAKEIGVKHLLQDIKDTTVGTLSQCITNQVLDLKGLNSKLLGTRSYLEKVATGKLSTNHQ 178
Query: 226 IIYQLQDVFNLLPDVSL 242
IYQLQ VF LLP +SL
Sbjct: 179 FIYQLQ-VFKLLPVISL 194
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 117 bits (292), Expect = 2e-26
Identities = 77/273 (28%), Positives = 141/273 (51%), Gaps = 11/273 (4%)
Query: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
V +HP++L S+VD + R + RV+G LLG+ K ++V+N F+VP +E + + +V
Sbjct: 92 VRLHPVILASIVDSYERRNE--GAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV- 148
Query: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKP 128
D ++ +NMY + KKV+ E I+GWY TG + ++ + I+E R PN + + +D
Sbjct: 149 --DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSL 206
Query: 129 KDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDI--KDTTVGT 186
++ + +AY+S + G F +T + + E +GV+ +++ + +G
Sbjct: 207 QNGRMSIKAYVST-LMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGL 265
Query: 187 LSQRITNQVHGLKG-LNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEF 245
S QV G + L + Y E V +GK+ ++ + L + N +P + +F
Sbjct: 266 SSD--LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDF 323
Query: 246 VKAFYLKTNDQMVVVYLASLIRSVVALHNLINN 278
ND ++V YLA+L +S +AL+ + N
Sbjct: 324 ETMLNSNINDLLMVTYLANLTQSQIALNEKLVN 356
>gi|34147637 COP9 signalosome subunit 6 [Homo sapiens]
Length = 327
Score = 107 bits (268), Expect = 1e-23
Identities = 70/273 (25%), Positives = 141/273 (51%), Gaps = 10/273 (3%)
Query: 9 VVVHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSV 67
V +HPLV+L++ DH+ R+ + G +V+G L+G + + ++V NSF + ++
Sbjct: 41 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI-- 98
Query: 68 WFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVK 127
+D +Y FK+V +GWY TG +DI +++ + + + + ++
Sbjct: 99 -IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPM 157
Query: 128 PKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVG-- 185
K LP + SV ++ + + F +T + EEAE +GV+H+ R + T G
Sbjct: 158 TKHTDLPVSVFESVIDIING--EATMLFAELTYTLATEEAERIGVDHVAR-MTATGSGEN 214
Query: 186 -TLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQE 244
T+++ + Q +K L+S++ I Y++ G++P NH+I+ + + + LP +S +
Sbjct: 215 STVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDK 274
Query: 245 FVKAFYLKTNDQMVVVYLASLIRSVVALHNLIN 277
F FY + ND ++ YL ++ ++ ++ +N
Sbjct: 275 FKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 307
>gi|38027923 COP9 signalosome subunit 5 [Homo sapiens]
Length = 334
Score = 45.1 bits (105), Expect = 9e-05
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 11 VHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFL 70
+ L LL +V H + G V+G++LG + + + +SFA+P + + +
Sbjct: 57 ISALALLKMVMH----ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAA 112
Query: 71 DHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVIID 125
++Y+ K+V E +GWYH+ P L D++ L +++ V V+ID
Sbjct: 113 AYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVID 171
>gi|5031981 proteasome 26S subunit, non-ATPase 14 [Homo sapiens]
Length = 310
Score = 45.1 bits (105), Expect = 9e-05
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 7 QKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS----WQKKVLDVSNSFAVPFDEDD 62
++V + L LL ++ H G+ G V+G++LG + +V+DV FA+P +
Sbjct: 29 EQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVIDV---FAMP--QSG 79
Query: 63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPN 118
SV +D + M M K+ E +VGWYH+ P L DI + +
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 119 SVLVIID 125
+V V++D
Sbjct: 140 AVAVVVD 146
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 270 VALHNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDK-DKEKSDVKKEEKKEKK 324
+AL N+ N+ +N+D E +E ++K++ KK + +DK ++K D EK KK+++K+KK
Sbjct: 156 IALFNVNNS--SNKDQEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKK 209
>gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [Homo
sapiens]
Length = 690
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/56 (39%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 270 VALHNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDK-DKEKSDVKKEEKKEKK 324
+AL N+ N+ +N+D E +E ++K++ KK + +DK ++K D EK KK+++K+KK
Sbjct: 87 IALFNVNNS--SNKDQEPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKK 140
>gi|4503515 eukaryotic translation initiation factor 3, subunit 3
gamma, 40kDa [Homo sapiens]
Length = 352
Score = 43.5 bits (101), Expect = 3e-04
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 5 AVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVP-FDEDDK 63
AV++V + LV+L ++ H+ G+ + V GVLLG + L+++N F P EDD
Sbjct: 35 AVKQVQIDGLVVLKIIKHYQEEGQ--GTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDA 92
Query: 64 DDSVWFLDHDYLENMYGMFKKVNARERIVGWYHT 97
D F + Y M + VN VGWY +
Sbjct: 93 D----FDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 43.5 bits (101), Expect = 3e-04
Identities = 17/46 (36%), Positives = 35/46 (76%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K ++KE ++++E +K+++++KEK+K+K+K KK++KK+KK
Sbjct: 67 KTTTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKK 112
Score = 38.1 bits (87), Expect = 0.011
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K R K+ +K+++++KEK+K+KEK K++EKK+KK
Sbjct: 57 KTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKK 102
Score = 35.8 bits (81), Expect = 0.053
Identities = 17/43 (39%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 283 RDAEKKEGQEKEESK-KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ EK++ +EKE+ K K+++++KEK K K+K KK++K K
Sbjct: 74 KEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAK 116
Score = 34.7 bits (78), Expect = 0.12
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKK 321
K ++ EK++ +EKE+ K+ KE K+K K K+K KK K
Sbjct: 74 KEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAK 116
Score = 32.0 bits (71), Expect = 0.77
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + ++ +K + ++++KEK+K+KEK K++EK+++K
Sbjct: 53 KTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEKEKEKEKEK 98
Score = 29.3 bits (64), Expect = 5.0
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 280 IANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
I +++ K G++K+ +KK +K+ K K+ + KK K KK
Sbjct: 16 ITEKESAWKRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKK 60
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 42.4 bits (98), Expect = 6e-04
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKD-KDKEKSDVKKEEKKEKK 324
K+A +D EK+ K+++KK+ K+D +KD K K D KK+ KK+ K
Sbjct: 302 KVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKKDEKKDAKKKGK 348
Score = 38.9 bits (89), Expect = 0.006
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 277 NNKIANRDAEK--KEGQEKE--ESKKDRKEDKEKDKDKE-KSDVKKEEKKEKK 324
+ K A +DA+K K+ EKE +SKKD K++ +KD K+ K + KK+EKK+ K
Sbjct: 292 SKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKKDEKKDAK 344
Score = 36.6 bits (83), Expect = 0.031
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 11/49 (22%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKE---------KSDVKKEEKKE 322
+DA K G E +++KKD KE K+ KDK+ K DVKKE KK+
Sbjct: 249 KDANK--GDESKDAKKDAKEIKKGKKDKKKPSSTDSDSKDDVKKESKKD 295
Score = 36.6 bits (83), Expect = 0.031
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 279 KIANRDAEKKEGQEKEESK---KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K ++ D++ K+ +KE K KD K+ +KD +KE +D KK+ KK K
Sbjct: 276 KPSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAK 324
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 278 NKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKE-KSDVKKEEKKEKK 324
+K +D E + K+ KKD K+ K+ +K KE K D KK+ KK KK
Sbjct: 120 DKTTQKDTTDSESELKQ-GKKDSKKGKDIEKGKEEKLDAKKDSKKGKK 166
Score = 33.1 bits (74), Expect = 0.34
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 282 NRDAEKKEGQEK--EESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++D KKE ++ +++KK K+D EK+ K D KK KK+ K
Sbjct: 284 SKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAK 328
Score = 32.3 bits (72), Expect = 0.59
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 285 AEKKEGQEKEESKKD-RKEDKEKDKDKEKSDVKKEEKKEKK 324
A K + ++ E+ KKD K D+ KD K+ ++KK +K +KK
Sbjct: 236 AVKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKK 276
Score = 31.2 bits (69), Expect = 1.3
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 277 NNKIANRDAEKKEGQ--EKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++K +D++K + E + K D K+D++ KD K D K+ KK+ K
Sbjct: 216 DSKKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDANKGDESKDAKKDAK 265
Score = 30.8 bits (68), Expect = 1.7
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Query: 277 NNKIANRDAEK------KEGQEKEESKKDRKEDKE---KDKDK------EKSDVKKEEKK 321
++K +DAEK + EK +KKD K+DK+ K KD EK +K+ KK
Sbjct: 160 DSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKGGTEKDSKK 219
Query: 322 EKK 324
KK
Sbjct: 220 GKK 222
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 284 DAEK--KEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
DA+K K+G++ E KD + E +K K D KK++K K
Sbjct: 156 DAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNK 198
Score = 29.3 bits (64), Expect = 5.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 8/50 (16%)
Query: 283 RDAEKKEGQE---KEESKKDRKE-DKEKDKDKEKSD----VKKEEKKEKK 324
+D EK + ++ K++SKK +K+ +K KD E D KK+ KK+KK
Sbjct: 145 KDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKK 194
Score = 28.5 bits (62), Expect = 8.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 281 ANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEK 323
A +K G EK+ K + K KD E VK +EKK++
Sbjct: 203 ATESEGEKGGTEKDSKKGKKDSKKGKDSAIELQAVKADEKKDE 245
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 42.0 bits (97), Expect = 7e-04
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ E+KEG+ KE+ K+ RKE ++K K KE K++E++EKK
Sbjct: 21 EEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKK 61
Score = 39.3 bits (90), Expect = 0.005
Identities = 15/39 (38%), Positives = 30/39 (76%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
E +E +EKE +K+++++K K+K+K+K + E++KEK+
Sbjct: 18 ETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKE 56
Score = 38.5 bits (88), Expect = 0.008
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ E+KE +EKEE ++ +K+ K + K++E+ KK +K KK
Sbjct: 82 EEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKK 122
Score = 38.1 bits (87), Expect = 0.011
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + E+ E E+EE K+ ++++K K+K KEK KK ++ EK+
Sbjct: 7 KKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKR 52
Score = 37.7 bits (86), Expect = 0.014
Identities = 16/39 (41%), Positives = 30/39 (76%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+KKE +E EE+++ +E++++ K KEK K++EK++KK
Sbjct: 6 KKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKK 44
Score = 37.4 bits (85), Expect = 0.018
Identities = 14/42 (33%), Positives = 31/42 (73%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ K++ +EKE+ KK ++ +K K+K++E+ K++ KK+K+
Sbjct: 30 KEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKE 71
Score = 37.4 bits (85), Expect = 0.018
Identities = 16/47 (34%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEK-DKDKEKSDVKKEEKKEKK 324
K ++ EK++ +E+EE K+ RK K+K ++++E+ + ++EE+KE++
Sbjct: 43 KKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEE 89
Score = 36.2 bits (82), Expect = 0.041
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K R ++KE ++++E KK KE EK K+KE+ + K++ K++KK
Sbjct: 25 KEGKRKEKRKEKRKEKEKKKKTKE-TEKRKEKEEEEKKRKRKRKKK 69
Score = 36.2 bits (82), Expect = 0.041
Identities = 14/39 (35%), Positives = 30/39 (76%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+KKE +E+EE +++ +E+KE+++ +E KK++K+ +K
Sbjct: 68 KKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRK 106
Score = 36.2 bits (82), Expect = 0.041
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + E++E +E+EE +++ KE+ + K K+K K+EE+++KK
Sbjct: 69 KKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 35.4 bits (80), Expect = 0.069
Identities = 12/42 (28%), Positives = 33/42 (78%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
R ++K+ +E+EE +++ +E++E+ +++EK + ++ +KK+K+
Sbjct: 62 RKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKR 103
Score = 35.0 bits (79), Expect = 0.090
Identities = 14/46 (30%), Positives = 32/46 (69%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K ++ EKK+ ++ E +K+++E+++K K K K ++EE++E++
Sbjct: 34 KEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEE 79
Score = 35.0 bits (79), Expect = 0.090
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKE-KDKDKEKSDVKKEEKKEKK 324
K + E++E +E+EE +K+ +E +E + + K+K +KEE++EKK
Sbjct: 67 KKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKK 113
Score = 34.7 bits (78), Expect = 0.12
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 286 EKKEGQEKEESKKDRKED-KEKDKDKEKSDVKKEEKKEKK 324
E +E +E+EE + RKE KEK K+KEK KE +K K+
Sbjct: 15 ETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKE 54
Score = 34.7 bits (78), Expect = 0.12
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 6/45 (13%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKK------EEKKEKK 324
E++E +E+EE +++ KE++EK++ + + KK EE+K+KK
Sbjct: 71 EEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKK 115
Score = 33.9 bits (76), Expect = 0.20
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 279 KIANRDAEKKEGQEKEES-KKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + E +E +E EE+ +++ KE K K+K KEK K+++KK K+
Sbjct: 2 KKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKE 48
Score = 33.5 bits (75), Expect = 0.26
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 284 DAEKKEGQEKEESKKD---RKEDKEKDKDKEKSDVKKEEKKEK 323
+ E++E +EKEE +K+ R++ K+K + KE+ + KK++++ K
Sbjct: 77 EEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 32.0 bits (71), Expect = 0.77
Identities = 14/42 (33%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
R ++KE ++K+++K+ K KEK+++++K K+++KKE++
Sbjct: 33 RKEKRKEKEKKKKTKETEKR-KEKEEEEKKRKRKRKKKKEEE 73
Score = 32.0 bits (71), Expect = 0.77
Identities = 11/41 (26%), Positives = 30/41 (73%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ E++E +E+EE ++ R+ K+K + +++ + +K++K+ +K
Sbjct: 79 EEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 31.6 bits (70), Expect = 1.0
Identities = 13/38 (34%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKK 321
+ EK+EG+ +++ KK R++++E++K K++ +K +KK
Sbjct: 88 EEEKEEGRRRKKKKKRRRKEEEEEKKKKRR--RKTKKK 123
Score = 31.2 bits (69), Expect = 1.3
Identities = 13/41 (31%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKE--KSDVKKEEKKEKK 324
+KK+ ++KE + + E+ E++++KE + + +KE++KEK+
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKE 41
Score = 31.2 bits (69), Expect = 1.3
Identities = 14/41 (34%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ E++E +++EE K++ + K+K K + K + +EEKK+K+
Sbjct: 78 EEEEEEEEKEEEEKEEGRRRKKKKKRRRKEE--EEEKKKKR 116
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 42.0 bits (97), Expect = 7e-04
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 262 LASLIRSVVALHN---LINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKE 318
LA L + A+H ++ N+ +KKE +EKE+ KKD K+K+KEK VK E
Sbjct: 463 LAELQEQLKAVHEQLAALSQAPVNKPKKKKEKKEKEKKKKD------KEKEKEKHKVKAE 516
Query: 319 EKKEKK 324
E+K+ K
Sbjct: 517 EEKKAK 522
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 41.6 bits (96), Expect = 0.001
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+++E +EKE+ KK +K+ K+K K K+K KK++KK+KK
Sbjct: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKK 139
Score = 41.2 bits (95), Expect = 0.001
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
E+K+ +EKE+ KK +K+ K+K K K+K KK++KK+K+
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKR 141
Score = 40.4 bits (93), Expect = 0.002
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 280 IANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ R+ +K++ +EK++ KK +K+ K+K K K+K KK++KK K+
Sbjct: 99 LPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKR 143
Score = 39.3 bits (90), Expect = 0.005
Identities = 17/54 (31%), Positives = 36/54 (66%)
Query: 271 ALHNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+LH ++ + ++KE ++K++ KK +K+ K+K K K+K KK++K+++K
Sbjct: 91 SLHLPLHGLPQREEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRK 144
Score = 37.7 bits (86), Expect = 0.014
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 272 LHNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
LH L + ++ EK++ ++K++ KK +K+ K+K K K+K KK ++K K+
Sbjct: 96 LHGLPQRE-EKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKR 147
Score = 37.7 bits (86), Expect = 0.014
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ EKK+ ++K++ KK +K+ K+K K K+K +K ++K K+
Sbjct: 108 KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKR 149
Score = 37.0 bits (84), Expect = 0.024
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + +KK+ ++K++ KK +K+ K K K K K KK+ KK+KK
Sbjct: 115 KKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKK 160
Score = 36.2 bits (82), Expect = 0.041
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K ++ +KK+ ++K++ KK +K+ K+K K K+K +K ++K K+
Sbjct: 106 KEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKR 151
Score = 35.4 bits (80), Expect = 0.069
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + +KK+ ++K++ KK +K+ K+K K K K K+++K++KK
Sbjct: 113 KKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKK 158
Score = 35.0 bits (79), Expect = 0.090
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + +KK+ ++K++ KK +K+ K+K K K++ +K ++K KK
Sbjct: 108 KEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKK 153
Score = 34.3 bits (77), Expect = 0.15
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEK 323
K + +KK+ ++K++ KK +K+ K K K K K K+++KK+K
Sbjct: 117 KKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
Score = 33.9 bits (76), Expect = 0.20
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + +KK+ ++K++ KK +K+ K+K + +++ +K +KK KK
Sbjct: 112 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKK 157
Score = 33.1 bits (74), Expect = 0.34
Identities = 13/46 (28%), Positives = 31/46 (67%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + +KK+ ++K++ KK +K+ K+K K +++ +K ++K+K+
Sbjct: 110 KEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKR 155
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 41.6 bits (96), Expect = 0.001
Identities = 17/39 (43%), Positives = 31/39 (79%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+KK+ +EK++ K+ KE KEK+++KEK + +K EK+++K
Sbjct: 701 KKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEK 739
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
E+KE +++E KKD+KE K+K K+KEK +KE +KEK+
Sbjct: 691 EEKEKVKEKEKKKDKKE-KKKKKEKEKEKKEKEREKEKR 728
Score = 39.7 bits (91), Expect = 0.004
Identities = 15/41 (36%), Positives = 33/41 (80%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ EK + +EK++ KK++K+ KEK+K+K++ + +KE+++ +K
Sbjct: 692 EKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREK 732
Score = 38.5 bits (88), Expect = 0.008
Identities = 17/39 (43%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
EKK+ +EKE+ KK+++ +KEK +++EK + +KE+ K +K
Sbjct: 707 EKKKKKEKEKEKKEKEREKEK-REREKREKEKEKHKHEK 744
Score = 37.0 bits (84), Expect = 0.024
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
E K +K+E ++DR+ +K+K+KDK K K +EK++ K
Sbjct: 528 ELKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDK 566
Score = 35.8 bits (81), Expect = 0.053
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 292 EKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
EK +K++ ++KEK KDK++ KKE++KEKK
Sbjct: 687 EKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKK 719
Score = 34.3 bits (77), Expect = 0.15
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 276 INNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ K+ +D ++ +EK + KK +E +KDKDK + + K++ +E K
Sbjct: 598 VDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDK 646
Score = 33.1 bits (74), Expect = 0.34
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 286 EKKEGQEKEESKKDRKEDK--EKDKDKEKSDVKKEEKKEK 323
+KKE Q E +KD+ +DK EKDK KEK K+ ++ K
Sbjct: 534 KKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKETGRETK 573
Score = 32.3 bits (72), Expect = 0.59
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 287 KKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
KKE + K + KK+++ D+E++KDK K K+++K ++K
Sbjct: 526 KKELKTKMK-KKEKQRDREREKDKNKDKSKEKDKVKEK 562
Score = 32.0 bits (71), Expect = 0.77
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 239 DVSLQEFVKAFYLKTNDQMV--VVYLASLIRSVVA---LHNLINNKIA-NRDAEKKEGQE 292
D S+ E V+ L T M Y++S S LH + K E K+ +
Sbjct: 467 DASIDEVVRKAKLGTPSNMPPNFPYISSPSVSPPTPEPLHKVYEEKTKLPSSVEVKKKLK 526
Query: 293 KEESKKDRKEDKEKDKDKEKSDVKKEEKKEK 323
KE K +K++K++D+++EK D K++ KEK
Sbjct: 527 KELKTKMKKKEKQRDREREK-DKNKDKSKEK 556
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 272 LHNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKE 322
L + K RD E+++ + K++SK+ K KEK+KDKE K KE
Sbjct: 529 LKTKMKKKEKQRDREREKDKNKDKSKEKDKV-KEKEKDKETGRETKYPWKE 578
Score = 30.8 bits (68), Expect = 1.7
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 270 VALHNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKK 317
V L + + K + +KK+ +EK + KD++E KEK KDK + D K
Sbjct: 602 VKLKDGLVRKEKEKHKDKKKDREKGKKDKDKRE-KEKVKDKGREDKMK 648
Score = 30.0 bits (66), Expect = 2.9
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEK 312
K ++ EKKE + ++E ++ K +KEK+K K +
Sbjct: 710 KKKEKEKEKKEKEREKEKREREKREKEKEKHKHE 743
Score = 28.5 bits (62), Expect = 8.5
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 278 NKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKK 321
+K + ++KE ++KE+ ++ K ++EK ++KEK K E+ K
Sbjct: 704 DKKEKKKKKEKEKEKKEKEREKEKREREK-REKEKEKHKHEKIK 746
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 41.6 bits (96), Expect = 0.001
Identities = 20/48 (41%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDK--EKSDVKKEEKKEKK 324
K A +A+KK+ +EKE +K+R+E +EKD+ + EK +K+E +KE++
Sbjct: 365 KRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQ 412
Score = 34.3 bits (77), Expect = 0.15
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
EK+E EKE+++K R +++ + + +E + K EEK++K+
Sbjct: 388 EKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKE 426
Score = 33.9 bits (76), Expect = 0.20
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 281 ANRDAEKKEGQEKEESKKDRKEDKEKDKD-KEKSDVKKEEKKEKK 324
A R+ ++K +E + +K++ K+ KE++K+ KEK +K EK EK+
Sbjct: 352 AEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKE 396
Score = 32.7 bits (73), Expect = 0.45
Identities = 12/37 (32%), Positives = 28/37 (75%)
Query: 287 KKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEK 323
K+E + +E K +KE++++ K+KE+ + +++++KEK
Sbjct: 361 KEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEK 397
Score = 32.3 bits (72), Expect = 0.59
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + E KE + +E+ +KD KE EK + KE+ +++E E K
Sbjct: 373 KKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAK 418
Score = 30.4 bits (67), Expect = 2.2
Identities = 14/42 (33%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ K+ +E ++ K++ KE KEK++ +EK + ++EK EK+
Sbjct: 361 KEEAKRAKEEAKKKKEEEKELKEKER-REKREKDEKEKAEKQ 401
Score = 30.0 bits (66), Expect = 2.9
Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 9/50 (18%)
Query: 283 RDAEKKEGQEKEESKKDRKEDK---------EKDKDKEKSDVKKEEKKEK 323
R+ ++KE EK+ K++R++++ EK K +E+ +++EEK+ K
Sbjct: 390 REKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREEEKRIK 439
Score = 29.3 bits (64), Expect = 5.0
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 283 RDAEKKEGQEKEESKKDRKED--KEKDKDKEKSDVKKEEKKEKK 324
RD E+ Q K ++++ KE +E + KE++ KKEE+KE K
Sbjct: 339 RDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELK 382
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 286 EKKEGQEKEESKKDRKED-KEKDKDKEKSDVKKEEKKEKK 324
EKKE ++K+E +KD KED KE K+K+K D EE +E++
Sbjct: 526 EKKEEEKKDEEEKDEKEDSKENTKEKDKIDGTAEETEERE 565
Score = 37.0 bits (84), Expect = 0.024
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 277 NNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKE 322
N +IA R +++++ +EKEE K ++ E KE++K E+ +KE+ KE
Sbjct: 502 NQQIA-RPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDEKEDSKE 546
Score = 32.0 bits (71), Expect = 0.77
Identities = 16/48 (33%), Positives = 34/48 (70%), Gaps = 4/48 (8%)
Query: 280 IANRDAEKKEGQEKE---ESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ R+ K+ G+ ++ S++++ E+KE+DK EK++ K+EEKK+++
Sbjct: 490 LVRRNYGKRRGRNQQIARPSQEEKVEEKEEDK-AEKTEKKEEEKKDEE 536
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 40.4 bits (93), Expect = 0.002
Identities = 17/41 (41%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKD-KDKEKSDVKKEEKKEK 323
D E++ E+EE KK+RK++++K+ K+K+K + ++E+KK K
Sbjct: 155 DRERQRWAEREERKKERKKERKKERKEKKKEEKRREDKKRK 195
Score = 36.2 bits (82), Expect = 0.041
Identities = 14/42 (33%), Positives = 28/42 (66%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
R E+K ++E + +E+++K++ KE+ +KE+KKE+K
Sbjct: 146 RQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEK 187
Score = 33.5 bits (75), Expect = 0.26
Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 282 NRDAEKKEGQEKEESK---KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+R+ E++ +E+E + + R+ D+E+ + E+ + KKE KKE+K
Sbjct: 131 DRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERK 176
Score = 31.2 bits (69), Expect = 1.3
Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 283 RDAEKKEGQEKEESKK-DRKEDKEKDKDKEKSDVKKEEKKEKK 324
R E++ +++E ++ DR+ + ++++ K + KKE KKE+K
Sbjct: 138 RQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERK 180
Score = 30.4 bits (67), Expect = 2.2
Identities = 10/43 (23%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 282 NRDAEKKEGQEKE-ESKKDRKEDKEKDKDKEKSDVKKEEKKEK 323
NR+ +K G+E++ +++++R ++E+ + +E+ ++ E+K +
Sbjct: 111 NRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRE 153
Score = 29.6 bits (65), Expect = 3.8
Identities = 10/44 (22%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 283 RDAEKKEGQEKEESKK---DRKEDKEKDKDKEKSDVKKEEKKEK 323
R+ E++ ++++ +K DR+ DK++D+++++ + E+ K
Sbjct: 74 RETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRK 117
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/38 (50%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 286 EKKEGQEKEESKKDRKE-DKEKDKDKEKSDVKKEEKKE 322
E+K+ +EK+E KK+RKE K++ + +EK D KKEEK++
Sbjct: 413 EEKKDKEKKEIKKERKELKKDEGRKEEKKDAKKEEKRK 450
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 275 LINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
LI +K+ + ++K + +E+ K++KE K++ K+ +K + +KEEKK+ K
Sbjct: 395 LIKDKVGKKHLKEKISKLEEKKDKEKKEIKKERKELKKDEGRKEEKKDAK 444
Score = 33.5 bits (75), Expect = 0.26
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 283 RDAEKKE-GQEKEESKKD--RKEDKEKDKDKEK-SDVKKEEKKEKK 324
+D EKKE +E++E KKD RKE+K+ K +EK D K E KK K
Sbjct: 416 KDKEKKEIKKERKELKKDEGRKEEKKDAKKEEKRKDTKPELKKISK 461
Score = 30.4 bits (67), Expect = 2.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKK 321
K ++ +K EG+ KEE K +KE+K KD E + K + K
Sbjct: 424 KKERKELKKDEGR-KEEKKDAKKEEKRKDTKPELKKISKPDLK 465
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 40.0 bits (92), Expect = 0.003
Identities = 16/41 (39%), Positives = 32/41 (78%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ E++E +E+EE +K+ +E +EK +KE+ + KK++K++KK
Sbjct: 2256 EREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKK 2296
Score = 38.1 bits (87), Expect = 0.011
Identities = 16/41 (39%), Positives = 32/41 (78%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ E++E +E+EE +++ +E KE+++ +EK K+EE+K+KK
Sbjct: 2250 EREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKK 2290
Score = 37.7 bits (86), Expect = 0.014
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ + E+KE +E EE + +++E+++K K KEK KKEE +EK+
Sbjct: 2261 EVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEK---KKEEVQEKE 2303
Score = 35.0 bits (79), Expect = 0.090
Identities = 13/38 (34%), Positives = 31/38 (81%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKK 321
+ E+K+ +++EE KK +K++K+K++ +EK +V +E+++
Sbjct: 2274 EGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEE 2311
Score = 34.7 bits (78), Expect = 0.12
Identities = 15/42 (35%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 284 DAEKKEGQEKEESKKDRKEDKE-KDKDKEKSDVKKEEKKEKK 324
+ E++E +E E +++RKE++E ++K EK + +K++KK++K
Sbjct: 2253 EEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEK 2294
Score = 33.9 bits (76), Expect = 0.20
Identities = 16/40 (40%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 286 EKKEGQEKE-ESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
E++EG+EK+ E +++ K+ K+K+K KE+ K+E +EK+
Sbjct: 2271 EEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKE 2310
Score = 32.3 bits (72), Expect = 0.59
Identities = 13/53 (24%), Positives = 35/53 (66%)
Query: 272 LHNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
L L + + + E++ +E+E +++ +E++E+ K++E+ + K+ EK+E++
Sbjct: 2234 LDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEE 2286
Score = 31.6 bits (70), Expect = 1.0
Identities = 13/39 (33%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 287 KKEGQEKEESKKDRKEDKEKDKDK---EKSDVKKEEKKE 322
+KE +EK++ KK++K+++ ++K++ EK ++ EE+ E
Sbjct: 2281 EKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETE 2319
Score = 28.9 bits (63), Expect = 6.5
Identities = 13/42 (30%), Positives = 28/42 (66%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEK 320
K ++ +K+E QEKEE ++++E +++ + SD ++EE+
Sbjct: 2288 KKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEE 2329
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 39.7 bits (91), Expect = 0.004
Identities = 16/42 (38%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
R ++ G+E++ ++DRKE+++K++ KE+ +KE+KKE+K
Sbjct: 235 RQRDRDRGKERDR-ERDRKEERKKERKKERKKERKEKKKEEK 275
Score = 38.1 bits (87), Expect = 0.011
Identities = 19/46 (41%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
Query: 282 NRDAEKKEGQE---KEESKKDRKEDKEKD-KDKEKSDVKKEEKKEK 323
+RD K+ +E KEE KK+RK++++K+ K+K+K + ++E+KK K
Sbjct: 238 DRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRK 283
Score = 35.4 bits (80), Expect = 0.069
Identities = 15/39 (38%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 282 NRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEK 320
+R+ EK++G+E+E +DR ++E+D+D+EK ++ EK
Sbjct: 124 DREREKQKGRERE---RDRGRERERDRDREKERERQTEK 159
Score = 35.4 bits (80), Expect = 0.069
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEE 319
K +R+ ++KE ++KE K+ +KE KEK K++++ + KK +
Sbjct: 243 KERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRK 283
Score = 35.0 bits (79), Expect = 0.090
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 287 KKEGQEKEESKKDRKEDKEKDKDKE-KSDVKKEEKKEKK 324
++E + E ++DR KE+D++++ K + KKE KKE+K
Sbjct: 226 ERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERK 264
Score = 33.9 bits (76), Expect = 0.20
Identities = 12/38 (31%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 288 KEGQEKEESKKDRKEDKEKDKDKEKS-DVKKEEKKEKK 324
+EG+ + + +++R+ D+++ K++++ D K+E KKE+K
Sbjct: 223 REGERETDRRRERQRDRDRGKERDRERDRKEERKKERK 260
Score = 32.0 bits (71), Expect = 0.77
Identities = 14/43 (32%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 283 RDAEK-KEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
RD ++ KE + + K++RK++++K++ KE+ + KK+E+K ++
Sbjct: 237 RDRDRGKERDRERDRKEERKKERKKERKKERKE-KKKEEKRRE 278
Score = 30.8 bits (68), Expect = 1.7
Identities = 15/50 (30%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 279 KIANRDAEK-KEGQEKEESKKDRKEDKEKDKDKEKS---DVKKEEKKEKK 324
K R EK ++GQ + E++++R ++EK K++E D +++ +KE++
Sbjct: 151 KERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERE 200
Score = 30.0 bits (66), Expect = 2.9
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 279 KIANRDAEKKEGQEKEESK---KDRKEDKEKDKD-KEKSDVKKEEKKEKK 324
K R+ E+ G+E+E + K+R+ EKD+D + +++ ++E +E++
Sbjct: 129 KQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDRERE 178
Score = 29.6 bits (65), Expect = 3.8
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 282 NRDAEKKEGQEKE-ESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
NRD EK+ E++ E +K + ++E+D+ +E+ + EK+ ++
Sbjct: 112 NRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERER 155
Score = 29.6 bits (65), Expect = 3.8
Identities = 12/40 (30%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 283 RDAEKKEGQEKE-ESKKDRKEDKEKDKDKEKSDVKKEEKK 321
RD E+++ +E+E E +DR+ D EK+++++ + ++K
Sbjct: 173 RDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRK 212
Score = 28.9 bits (63), Expect = 6.5
Identities = 12/42 (28%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 281 ANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKE 322
A++DA+ + Q +E + K +KE+D+D+++ ++ ++KE
Sbjct: 68 AHKDADGDDRQ-RERDRVREKTEKERDRDRKRDRERRRKEKE 108
Score = 28.9 bits (63), Expect = 6.5
Identities = 9/43 (20%), Positives = 26/43 (60%)
Query: 282 NRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+R E+ +EK E ++DR +++++ +++ + + +EK+
Sbjct: 76 DRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQ 118
Score = 28.9 bits (63), Expect = 6.5
Identities = 10/42 (23%), Positives = 25/42 (59%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
RD E++ +++ +DR++ E ++D+E+ K E++ +
Sbjct: 98 RDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDR 139
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 39.3 bits (90), Expect = 0.005
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Query: 280 IANRDAEKKEGQEKEESKKDRKED----KEKDKDKEKSDVKKEEKKE 322
I D KK+GQE+++ KK K+D KE+DK +++ D KKE KKE
Sbjct: 211 ITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPD-KKEGKKE 256
Score = 28.9 bits (63), Expect = 6.5
Identities = 12/38 (31%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 287 KKEGQEKEESKKDRKEDKEKDKDK-EKSDVKKEEKKEK 323
+KE +++ ++++ E ++++KD+ +K +VKK EKK +
Sbjct: 308 EKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRE 345
>gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo
sapiens]
Length = 333
Score = 39.3 bits (90), Expect = 0.005
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Query: 280 IANRDAEKKEGQEKEESKKDRKED----KEKDKDKEKSDVKKEEKKE 322
I D KK+GQE+++ KK K+D KE+DK +++ D KKE KKE
Sbjct: 211 ITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPD-KKEGKKE 256
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 39.3 bits (90), Expect = 0.005
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Query: 280 IANRDAEKKEGQEKEESKKDRKED----KEKDKDKEKSDVKKEEKKE 322
I D KK+GQE+++ KK K+D KE+DK +++ D KKE KKE
Sbjct: 211 ITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRKEPD-KKEGKKE 256
Score = 28.9 bits (63), Expect = 6.5
Identities = 12/38 (31%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 287 KKEGQEKEESKKDRKEDKEKDKDK-EKSDVKKEEKKEK 323
+KE +++ ++++ E ++++KD+ +K +VKK EKK +
Sbjct: 308 EKEAADRKRKQEEQMETEQQNKDEGKKPEVKKVEKKRE 345
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 39.3 bits (90), Expect = 0.005
Identities = 18/49 (36%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 276 INNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ + + E+ E +EKEE K++ +E++EK+++KE+ D ++EEK+ KK
Sbjct: 118 VEEEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEE-DEEEEEKEGKK 165
Score = 37.7 bits (86), Expect = 0.014
Identities = 16/43 (37%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKK--EEKKEKK 324
+ EK+E +E++E +++++E+KE+D+++E+ + KK EEK E++
Sbjct: 132 EEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEE 174
Score = 33.9 bits (76), Expect = 0.20
Identities = 15/39 (38%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKK 321
++ EK+E +E+EE +++++ED+E ++EK K EE+K
Sbjct: 135 KEEEKEEDEEEEEKEEEKEEDEE---EEEKEGKKMEEEK 170
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 39.3 bits (90), Expect = 0.005
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 279 KIANRDAEKKEGQEKEESK-----KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ +D EK+ +EKE K K++ DKE++KD+EK K E++ +K
Sbjct: 389 RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREK 439
Score = 39.3 bits (90), Expect = 0.005
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Query: 283 RDAEKKEGQEKEESK---KDRKEDKEKDKDKEK-SDVKKEEKKEKK 324
R+ EK+ G+ K+ K KDR++DKEKD+++E+ + +K+ KEK+
Sbjct: 405 REKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKE 450
Score = 38.9 bits (89), Expect = 0.006
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 283 RDAEKKEGQEKEESK-KDRKEDKEKD--KDKEKSDVKKEEKKEKK 324
R+ EK+ +EKE K KDR +++EKD KDKEK ++ EK+ +K
Sbjct: 399 REREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK 443
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/49 (34%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 278 NKIANRDAEKKEGQEKEESK-KDRKEDKEKDKDKEKS-DVKKEEKKEKK 324
+K +R+ E+++ EK+ K K++++DKEK+++K++S ++ ++ KK+KK
Sbjct: 428 DKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKK 476
Score = 38.5 bits (88), Expect = 0.008
Identities = 17/48 (35%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 278 NKIANRDAEKKEGQEKEESK-KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
NK +++ EK ++KE+ + ++R+++ EKD+DKEK + +EK+ +K
Sbjct: 414 NKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 461
Score = 38.1 bits (87), Expect = 0.011
Identities = 15/47 (31%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 279 KIANRDAEKKEGQEKEESK-KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K +RD E+++ +EK++ K ++R+ +KE +KD++K K+++K++++
Sbjct: 413 KNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKER 459
Score = 35.4 bits (80), Expect = 0.069
Identities = 14/42 (33%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 283 RDAEKKEGQEKEESKK-DRKEDKEKDKDKEKSDVKKEEKKEK 323
R+ E ++ ++KE+ K+ D+++++EKD+ KE + +K++KK +
Sbjct: 437 REKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 478
Score = 35.0 bits (79), Expect = 0.090
Identities = 14/52 (26%), Positives = 32/52 (61%)
Query: 273 HNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
H+ K ++KE ++++ +K+R+ +KE++K+KE+ K +K+ +K
Sbjct: 372 HSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREK 423
Score = 35.0 bits (79), Expect = 0.090
Identities = 19/49 (38%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 279 KIANRDAEKKEGQEKE-ESKKDRKEDKE--KDKDKEKSDVKKEEKKEKK 324
KI ++ K++ +EKE E +K+R+++KE K+KD++K K EK ++K
Sbjct: 383 KIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEK 431
Score = 33.1 bits (74), Expect = 0.34
Identities = 15/50 (30%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 278 NKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEK---SDVKKEEKKEKK 324
+K ++ E+++ + + S+ RK+ +EK K+KE+ D +KE ++EK+
Sbjct: 355 HKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE 404
Score = 32.0 bits (71), Expect = 0.77
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K +R + + ++ E K+++ KEKD++KE+ K+ EK++++
Sbjct: 366 KSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKER 411
Score = 32.0 bits (71), Expect = 0.77
Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 279 KIANRDAEKKEGQEKEESK-KDRKEDKEKDKDKE-KSDVKKEEKKEK 323
K R K +E+E+ + KD+++D+E++++KE + D KE++KE+
Sbjct: 407 KEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQ 453
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 39.3 bits (90), Expect = 0.005
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 279 KIANRDAEKKEGQEKEESK-----KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ +D EK+ +EKE K K++ DKE++KD+EK K E++ +K
Sbjct: 273 RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREK 323
Score = 39.3 bits (90), Expect = 0.005
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Query: 283 RDAEKKEGQEKEESK---KDRKEDKEKDKDKEK-SDVKKEEKKEKK 324
R+ EK+ G+ K+ K KDR++DKEKD+++E+ + +K+ KEK+
Sbjct: 289 REKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKE 334
Score = 38.9 bits (89), Expect = 0.006
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 283 RDAEKKEGQEKEESK-KDRKEDKEKD--KDKEKSDVKKEEKKEKK 324
R+ EK+ +EKE K KDR +++EKD KDKEK ++ EK+ +K
Sbjct: 283 REREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEK 327
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/49 (34%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 278 NKIANRDAEKKEGQEKEESK-KDRKEDKEKDKDKEKS-DVKKEEKKEKK 324
+K +R+ E+++ EK+ K K++++DKEK+++K++S ++ ++ KK+KK
Sbjct: 312 DKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKK 360
Score = 38.5 bits (88), Expect = 0.008
Identities = 17/48 (35%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 278 NKIANRDAEKKEGQEKEESK-KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
NK +++ EK ++KE+ + ++R+++ EKD+DKEK + +EK+ +K
Sbjct: 298 NKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 345
Score = 38.1 bits (87), Expect = 0.011
Identities = 15/47 (31%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 279 KIANRDAEKKEGQEKEESK-KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K +RD E+++ +EK++ K ++R+ +KE +KD++K K+++K++++
Sbjct: 297 KNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKER 343
Score = 35.4 bits (80), Expect = 0.069
Identities = 14/42 (33%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 283 RDAEKKEGQEKEESKK-DRKEDKEKDKDKEKSDVKKEEKKEK 323
R+ E ++ ++KE+ K+ D+++++EKD+ KE + +K++KK +
Sbjct: 321 REKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR 362
Score = 35.0 bits (79), Expect = 0.090
Identities = 14/52 (26%), Positives = 32/52 (61%)
Query: 273 HNLINNKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
H+ K ++KE ++++ +K+R+ +KE++K+KE+ K +K+ +K
Sbjct: 256 HSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREK 307
Score = 35.0 bits (79), Expect = 0.090
Identities = 19/49 (38%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 279 KIANRDAEKKEGQEKE-ESKKDRKEDKE--KDKDKEKSDVKKEEKKEKK 324
KI ++ K++ +EKE E +K+R+++KE K+KD++K K EK ++K
Sbjct: 267 KIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEK 315
Score = 33.1 bits (74), Expect = 0.34
Identities = 15/50 (30%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 278 NKIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEK---SDVKKEEKKEKK 324
+K ++ E+++ + + S+ RK+ +EK K+KE+ D +KE ++EK+
Sbjct: 239 HKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE 288
Score = 32.0 bits (71), Expect = 0.77
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K +R + + ++ E K+++ KEKD++KE+ K+ EK++++
Sbjct: 250 KSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKER 295
Score = 32.0 bits (71), Expect = 0.77
Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 279 KIANRDAEKKEGQEKEESK-KDRKEDKEKDKDKE-KSDVKKEEKKEK 323
K R K +E+E+ + KD+++D+E++++KE + D KE++KE+
Sbjct: 291 KEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQ 337
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 38.9 bits (89), Expect = 0.006
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKED-----KEKDKDKEKSDVKKEEKKEKK 324
K R+ E KEG+EKE+ KK K++ KE + + K + K+EE+KE++
Sbjct: 98 KKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERE 148
Score = 37.7 bits (86), Expect = 0.014
Identities = 13/40 (32%), Positives = 31/40 (77%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKE 322
++ E+KE +++EE K+ ++ +E++K++E+ + KK E+K+
Sbjct: 131 KERERKEERKREERKERERKKEEREKERERKERKKRERKQ 170
Score = 37.4 bits (85), Expect = 0.018
Identities = 17/48 (35%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 279 KIANRDAEKKEGQEKEESKKDR--KEDKEKDKDKEKSDVKKEEKKEKK 324
++ ++ E+KE + KE K++R KE K++ + KE+ + KKE KK+++
Sbjct: 170 QVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEE 217
Score = 37.0 bits (84), Expect = 0.024
Identities = 12/42 (28%), Positives = 33/42 (78%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ E+KE +++E ++K+RK+++E+ + +E+ +K++++ KK
Sbjct: 179 KEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKK 220
Score = 36.6 bits (83), Expect = 0.031
Identities = 17/45 (37%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Query: 283 RDAE-KKEGQEKEESKKDRKEDKEKDKDKE--KSDVKKEEKKEKK 324
R++E KKE +E+E+ K++R++++++++ K+ K + KKEE++ KK
Sbjct: 55 RESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKK 99
Score = 36.6 bits (83), Expect = 0.031
Identities = 15/38 (39%), Positives = 28/38 (73%)
Query: 287 KKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
KKE +EKE +K+RK+ + K +++ + K++E+KE+K
Sbjct: 150 KKEEREKERERKERKKRERKQVGEKEEERKEKERKERK 187
Score = 35.8 bits (81), Expect = 0.053
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 283 RDAEKKEGQEKEE--SKKDRKEDKEKDKDKEKSDVKKEEKKEK 323
R ++K+G+ K+E +K R+ +KE + +EK KK+EKKE+
Sbjct: 81 RGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKER 123
Score = 35.8 bits (81), Expect = 0.053
Identities = 17/43 (39%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKE-EKKEKK 324
R KEG+E+E K++RK ++ K+++++K + +KE E+KE+K
Sbjct: 123 RGRTSKEGKERER-KEERKREERKERERKKEEREKERERKERK 164
Score = 35.8 bits (81), Expect = 0.053
Identities = 14/42 (33%), Positives = 30/42 (71%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
R+ K+ ++KEE +K+R+ + K +++++ K+EE+KEK+
Sbjct: 141 REERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKE 182
Score = 35.8 bits (81), Expect = 0.053
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 277 NNKIANRDAEKKEGQEKEESKK---DRKEDKEKDKD---KEKSDVKKEEKKEKK 324
N K ++ E+KE +E+++ +K +RK++++KD+ +EK K+E K+ KK
Sbjct: 192 NRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 35.0 bits (79), Expect = 0.090
Identities = 14/42 (33%), Positives = 30/42 (71%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
R E+ + ++K E KK+ +E K++ ++KE + +++EK++KK
Sbjct: 77 RKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKK 118
Score = 35.0 bits (79), Expect = 0.090
Identities = 12/41 (29%), Positives = 30/41 (73%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEK 323
++ +KE + KE K++RK+ EK++++++ + K+ +K+E+
Sbjct: 151 KEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRER 191
Score = 34.7 bits (78), Expect = 0.12
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 286 EKKEGQEKEESKK-DRKEDKEKDKDKEKSDVKKEEKKEKK 324
E KE + KEE K+ +RKE + K +++EK +KE KK ++
Sbjct: 129 EGKERERKEERKREERKERERKKEEREKERERKERKKRER 168
Score = 33.9 bits (76), Expect = 0.20
Identities = 20/56 (35%), Positives = 38/56 (67%), Gaps = 9/56 (16%)
Query: 278 NKIANRDAE---KKEGQEKEES--KKDRKE----DKEKDKDKEKSDVKKEEKKEKK 324
++I R+ E +KEG+++ ES KK+R+E +E++K++++ KKE+K E+K
Sbjct: 36 SEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERK 91
Score = 33.9 bits (76), Expect = 0.20
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K + +KE + KE+ +K+RK+ + K+++K +KE ++ KK
Sbjct: 165 KRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKK 210
Score = 33.5 bits (75), Expect = 0.26
Identities = 13/43 (30%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 283 RDAEKKEGQEKEESK-KDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ +K+E KE K ++RKE +E+ K+++K + +K+E+++ +
Sbjct: 184 KERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDR 226
Score = 33.1 bits (74), Expect = 0.34
Identities = 11/42 (26%), Positives = 29/42 (69%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ E+KE +++E + KE++ K+K++++ ++ +KE+K
Sbjct: 156 KERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERK 197
Score = 32.7 bits (73), Expect = 0.45
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 279 KIANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
K R KK + ++E KK+R+ + +++ KE+ KKEE+K+++
Sbjct: 179 KEKERKERKKRERNRKERKKERERKERRERKKERK--KKEERKKER 222
Score = 32.0 bits (71), Expect = 0.77
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Query: 279 KIANRDAEKKEGQEKEESKKDR----------KEDKEKDKDKEKSDVKKEEKKEKK 324
K R+ EK++ + ++E K++R KE++E+ K + + + K+ E+KEK+
Sbjct: 60 KKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKR 115
Score = 31.6 bits (70), Expect = 1.0
Identities = 15/44 (34%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKE--KDKDKEKSDVKKEEKKEKK 324
R+ E+K + K+E K +RK+++ K + +EK + + EEK+++K
Sbjct: 73 REKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRK 116
Score = 31.2 bits (69), Expect = 1.3
Identities = 13/42 (30%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
++ +K+E ++ E +++RKE + K++ K + + +KE KKE++
Sbjct: 161 KERKKRERKQVGEKEEERKEKERKERKKRERN-RKERKKERE 201
Score = 30.4 bits (67), Expect = 2.2
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 283 RDAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
R+ +KE +++ E K+ R+ KE+ K +E+ KKE +K+++
Sbjct: 189 RERNRKERKKERERKERRERKKERKKKEER---KKERQKDRQ 227
Score = 29.3 bits (64), Expect = 5.0
Identities = 11/41 (26%), Positives = 28/41 (68%)
Query: 284 DAEKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+ E+K+ + ++E+K+ +++K K K+K++ +E KE++
Sbjct: 94 ERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERE 134
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 38.9 bits (89), Expect = 0.006
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 278 NKIANRDAEKKEGQEKEES---KKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
+K ++ KKE +KE+ KK+ K KE+ K + K ++KKEEKKE K
Sbjct: 648 DKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPK 697
Score = 37.4 bits (85), Expect = 0.018
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKE-KSDVKKEEKKEKK 324
E K+ +KEE K+ +KE K++ KE K +VKKEEKKE K
Sbjct: 683 EVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVK 722
Score = 37.0 bits (84), Expect = 0.024
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 263 ASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKDRKEDK---EKDKDKEKSDVKKEE 319
A+ ++ A + + + +KKE +EK + + +KEDK +K++ +K +VKKE
Sbjct: 625 ATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEV 684
Query: 320 KKEKK 324
KKE K
Sbjct: 685 KKEIK 689
Score = 37.0 bits (84), Expect = 0.024
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 286 EKKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
EKKE +++ + + KE K++ K +EK +VKKEEK+ KK
Sbjct: 692 EKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKK 730
Score = 34.7 bits (78), Expect = 0.12
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 280 IANRDAEKKEGQEKEESKKDRKEDKEKDKDKEKSD-----VKKEEKKEKK 324
I + KKE +KE K+ +KE+K++ K + K + VKKE KKE+K
Sbjct: 669 IKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEK 718
Score = 30.4 bits (67), Expect = 2.2
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 287 KKEGQEKEESKKDRKEDKEKDKDKEKSDVKKEEKKEKK 324
KKE KE K+ +KE+K++ K KE+ + KKE KK K
Sbjct: 701 KKETPPKEVKKEVKKEEKKEVK-KEEKEPKKEIKKLPK 737
Score = 29.6 bits (65), Expect = 3.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 279 KIANRDAEKKEGQE-KEESKKDRKEDKEKDKDKEKSDVKKEEKKE 322
K ++ +K+E +E K+E K+ +KE K+ KD +KS E K+
Sbjct: 707 KEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKK 751
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,780,505
Number of Sequences: 37866
Number of extensions: 548267
Number of successful extensions: 14537
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 6181
Number of HSP's gapped (non-prelim): 5946
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.