Guide to the Human Genome
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Name: EIF3H Sequence: fasta or formatted (352aa) NCBI GI: 4503515
Description:

eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         21           2
 C cysteine            0.9          3           1
 D aspartate           4.8         17           2
 E glutamate           7.7         27           2
 F phenylalanine       3.1         11           1
 G glycine             6.0         21           2
 H histidine           2.8         10           1
 I isoleucine          4.5         16           2
 K lysine              7.4         26           2
 L leucine             9.7         34           2
 M methionine          3.7         13           2
 N asparagine          4.3         15           2
 P proline             3.7         13           2
 Q glutamine           8.8         31           4
 R arginine            3.7         13           2
 S serine              7.7         27           4
 T threonine           4.5         16           1
 V valine              6.2         22           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.0         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 3, subunit 3... 
PSMD14                0.059   proteasome 26S subunit, non-ATPase 14 
EIF3F                 0.044   eukaryotic translation initiation factor 3, subunit 5...
PSMD7                 0.028   proteasome 26S non-ATPase subunit 7 
HTT                   0.022   huntingtin 
COPS6                 0.019   COP9 signalosome subunit 6 
SMARCA2               0.016   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.016   SWI/SNF-related matrix-associated actin-dependent re...
MED12                 0.016   mediator complex subunit 12 
TFEB                  0.016   transcription factor EB 
SYNE2                 0.015   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.015   spectrin repeat containing, nuclear envelope 2 isof...
MED15                 0.015   mediator complex subunit 15 isoform a 
MED15                 0.015   mediator complex subunit 15 isoform b 
NCOA3                 0.015   nuclear receptor coactivator 3 isoform a 
NCOA3                 0.015   nuclear receptor coactivator 3 isoform b 
RBL2                  0.013   retinoblastoma-like 2 (p130) 
FRMPD3                0.013   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.013   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.013   PREDICTED: FERM and PDZ domain containing 3 
ZNF853                0.013   zinc finger protein 853 
ATXN1                 0.013   ataxin 1 
ATXN1                 0.013   ataxin 1 
FMNL2                 0.013   formin-like 2 
NCOA6                 0.013   nuclear receptor coactivator 6 
FOXP2                 0.012   forkhead box P2 isoform I 
FOXP2                 0.012   forkhead box P2 isoform III 
FOXP2                 0.012   forkhead box P2 isoform II 
LOC645202             0.012   PREDICTED: hypothetical protein LOC645202 
CEP135                0.012   centrosome protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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