COPS5 26731

Name: COPS5	Sequence: fasta or formatted (334aa)		NCBI GI: 38027923
Description: COP9 signalosome subunit 5		Referenced in: Proteasome Signalosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 28 3 C cysteine 1.2 4 1 D aspartate 4.8 16 1 E glutamate 6.9 23 1 F phenylalanine 3.0 10 1 G glycine 6.9 23 2 H histidine 2.4 8 2 I isoleucine 5.4 18 2 K lysine 7.8 26 2 L leucine 9.3 31 2 M methionine 3.9 13 1 N asparagine 4.2 14 2 P proline 3.0 10 2 Q glutamine 5.7 19 3 R arginine 2.7 9 1 S serine 7.5 25 4 T threonine 5.4 18 2 V valine 4.8 16 2 W tryptophan 1.8 6 1 Y tyrosine 5.1 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 COP9 signalosome subunit 5 PSMD14 0.175 proteasome 26S subunit, non-ATPase 14 BRCC3 0.037 BRCA1/BRCA2-containing complex, subunit 3 isoform 2 ... BRCC3 0.037 BRCA1/BRCA2-containing complex, subunit 3 isoform 1 ... PSMD7 0.031 proteasome 26S non-ATPase subunit 7 MYSM1 0.022 Myb-like, SWIRM and MPN domains 1 STAMBPL1 0.022 STAM binding protein-like 1 STAMBP 0.018 STAM binding protein STAMBP 0.018 STAM binding protein STAMBP 0.018 STAM binding protein COPS6 0.018 COP9 signalosome subunit 6 EIF3F 0.014 eukaryotic translation initiation factor 3, subunit 5... MPND 0.012 MPN domain containing isoform 2 C2orf71 0.011 hypothetical protein LOC388939 MPND 0.008 MPN domain containing isoform 1 UBR2 0.006 ubiquitin protein ligase E3 component n-recognin 2 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.