PSMD3 24129

Name: PSMD3	Sequence: fasta or formatted (534aa)		NCBI GI: 25777612
Description: proteasome 26S non-ATPase subunit 3		Referenced in: Proteasome Signalosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 51 5 C cysteine 0.4 2 1 D aspartate 5.8 31 4 E glutamate 7.9 42 2 F phenylalanine 4.1 22 2 G glycine 4.3 23 3 H histidine 2.4 13 1 I isoleucine 4.1 22 2 K lysine 6.6 35 1 L leucine 10.9 58 3 M methionine 2.6 14 2 N asparagine 3.2 17 3 P proline 4.9 26 5 Q glutamine 5.6 30 2 R arginine 7.7 41 3 S serine 5.8 31 1 T threonine 4.9 26 1 V valine 5.2 28 2 W tryptophan 0.2 1 1 Y tyrosine 3.9 21 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome 26S non-ATPase subunit 3 COPS3 0.043 COP9 constitutive photomorphogenic homolog subunit 3... FOXK1 0.015 forkhead box K1 RNF19B 0.013 ring finger protein 19B isoform a RNF19B 0.013 ring finger protein 19B isoform b CKAP4 0.012 cytoskeleton-associated protein 4 XYLT1 0.011 xylosyltransferase I LOC100291860 0.011 PREDICTED: hypothetical protein XP_002344548 LOC100290144 0.011 PREDICTED: hypothetical protein XP_002347189 EIF5 0.011 eukaryotic translation initiation factor 5 EIF5 0.011 eukaryotic translation initiation factor 5 BPTF 0.010 bromodomain PHD finger transcription factor isoform ... BPTF 0.010 bromodomain PHD finger transcription factor isoform ... TMC2 0.010 transmembrane cochlear-expressed protein 2 FOXL1 0.010 forkhead box L1 FAM134B 0.010 hypothetical protein LOC54463 isoform 1 SMC4 0.010 SMC4 structural maintenance of chromosomes 4-like 1 ... CDK5R2 0.010 cyclin-dependent kinase 5, regulatory subunit 2 [Homo... SMC4 0.010 SMC4 structural maintenance of chromosomes 4-like 1 ... BASP1 0.009 brain abundant, membrane attached signal protein 1 [... PRB3 0.009 proline-rich protein BstNI subfamily 3 precursor [H... MYO1E 0.009 myosin IE RBL2 0.009 retinoblastoma-like 2 (p130) LOC100293297 0.009 PREDICTED: similar to hCG1785205 LOC100288352 0.009 PREDICTED: similar to hCG1785205 LOC100288352 0.009 PREDICTED: hypothetical protein XP_002343764 C1orf96 0.009 hypothetical protein LOC126731 VSTM2B 0.008 V-set and transmembrane domain containing 2B CEBPB 0.008 CCAAT/enhancer binding protein beta CRTC1 0.008 mucoepidermoid carcinoma translocated 1 isoform 3 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.