COPS3 15848

Name: COPS3	Sequence: fasta or formatted (423aa)		NCBI GI: 23238222
Description: COP9 constitutive photomorphogenic homolog subunit 3		Referenced in: Proteasome Signalosome
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 26 1 C cysteine 2.4 10 1 D aspartate 4.7 20 2 E glutamate 5.7 24 1 F phenylalanine 4.0 17 1 G glycine 4.7 20 2 H histidine 2.8 12 1 I isoleucine 5.2 22 1 K lysine 6.6 28 2 L leucine 12.5 53 2 M methionine 4.3 18 2 N asparagine 5.7 24 2 P proline 3.3 14 1 Q glutamine 7.1 30 2 R arginine 2.6 11 1 S serine 7.6 32 2 T threonine 4.7 20 2 V valine 5.4 23 1 W tryptophan 0.0 0 0 Y tyrosine 4.5 19 4			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 COP9 constitutive photomorphogenic homolog subunit 3... PSMD3 0.054 proteasome 26S non-ATPase subunit 3 PSMD12 0.010 proteasome 26S non-ATPase subunit 12 isoform 1 PSMD12 0.010 proteasome 26S non-ATPase subunit 12 isoform 2 [Homo... COPS4 0.009 COP9 signalosome subunit 4 SERPINA7 0.007 serine (or cysteine) proteinase inhibitor, clade A,... EIF3E 0.007 eukaryotic translation initiation factor 3, subunit 6... DNAH17 0.006 PREDICTED: dynein, axonemal, heavy chain 17 DNAH17 0.006 PREDICTED: dynein, axonemal, heavy chain 17 COG7 0.006 component of oligomeric golgi complex 7 TTC17 0.005 tetratricopeptide repeat domain 17 LOC100292074 0.005 PREDICTED: hypothetical protein XP_002345940 LOC100290874 0.005 PREDICTED: hypothetical protein XP_002346807 LOC100294314 0.005 PREDICTED: hypothetical protein XP_002344084 LOC100294273 0.005 PREDICTED: hypothetical protein XP_002344051 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.