BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo sapiens] (513 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo s... 1023 0.0 gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo s... 1004 0.0 gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo s... 882 0.0 gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] 268 1e-71 gi|4503483 eukaryotic translation elongation factor 2 [Homo sapi... 99 7e-21 gi|157426893 GUF1 GTPase homolog [Homo sapiens] 98 2e-20 gi|94966754 elongation factor Tu GTP binding domain containing 1... 97 5e-20 gi|239756373 PREDICTED: similar to elongation factor Tu GTP bind... 75 2e-13 gi|239750897 PREDICTED: similar to elongation factor Tu GTP bind... 75 2e-13 gi|239745282 PREDICTED: similar to elongation factor Tu GTP bind... 75 2e-13 gi|217272894 elongation factor Tu GTP binding domain containing ... 70 4e-12 gi|217272892 elongation factor Tu GTP binding domain containing ... 70 4e-12 gi|94966752 elongation factor Tu GTP binding domain containing 1... 68 2e-11 gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 61 3e-09 gi|239757543 PREDICTED: similar to eukaryotic translation elonga... 60 4e-09 gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 60 4e-09 gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 52 1e-06 gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 52 1e-06 gi|34147630 Tu translation elongation factor, mitochondrial prec... 52 1e-06 gi|53729339 mitochondrial translational initiation factor 2 prec... 49 8e-06 gi|53729337 mitochondrial translational initiation factor 2 prec... 49 8e-06 gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 44 3e-04 gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 44 3e-04 gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 44 3e-04 gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 44 3e-04 gi|46094014 peptide chain release factor 3 [Homo sapiens] 42 0.001 gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp... 37 0.033 gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 32 1.8 gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 32 1.8 gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 31 3.1 >gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo sapiens] Length = 513 Score = 1023 bits (2645), Expect = 0.0 Identities = 513/513 (100%), Positives = 513/513 (100%) Query: 1 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH 60 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH Sbjct: 1 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH 60 Query: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG 120 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG Sbjct: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG 120 Query: 121 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW 180 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW Sbjct: 121 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW 180 Query: 181 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM 240 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM Sbjct: 181 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM 240 Query: 241 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS 300 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS Sbjct: 241 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS 300 Query: 301 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL 360 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL Sbjct: 301 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL 360 Query: 361 QWYKDDLCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAIHNINGNCTERISRLLLPFADQ 420 QWYKDDLCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAIHNINGNCTERISRLLLPFADQ Sbjct: 361 QWYKDDLCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAIHNINGNCTERISRLLLPFADQ 420 Query: 421 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL 480 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL Sbjct: 421 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL 480 Query: 481 AGVEIPEPVFFCTIEPPSLSKQPGINGLSVSTN 513 AGVEIPEPVFFCTIEPPSLSKQPGINGLSVSTN Sbjct: 481 AGVEIPEPVFFCTIEPPSLSKQPGINGLSVSTN 513 >gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo sapiens] Length = 779 Score = 1004 bits (2597), Expect = 0.0 Identities = 503/505 (99%), Positives = 504/505 (99%) Query: 1 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH 60 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH Sbjct: 1 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH 60 Query: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG 120 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG Sbjct: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG 120 Query: 121 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW 180 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW Sbjct: 121 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW 180 Query: 181 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM 240 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM Sbjct: 181 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM 240 Query: 241 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS 300 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS Sbjct: 241 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS 300 Query: 301 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL 360 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL Sbjct: 301 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL 360 Query: 361 QWYKDDLCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAIHNINGNCTERISRLLLPFADQ 420 QWYKDDLCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAIHNINGNCTERISRLLLPFADQ Sbjct: 361 QWYKDDLCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAIHNINGNCTERISRLLLPFADQ 420 Query: 421 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL 480 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL Sbjct: 421 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL 480 Query: 481 AGVEIPEPVFFCTIEPPSLSKQPGI 505 AGVEIPEPVFFCTIEPPSLSKQP + Sbjct: 481 AGVEIPEPVFFCTIEPPSLSKQPDL 505 >gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo sapiens] Length = 732 Score = 882 bits (2280), Expect = 0.0 Identities = 456/505 (90%), Positives = 457/505 (90%), Gaps = 47/505 (9%) Query: 1 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH 60 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH Sbjct: 1 MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRNCSSLPGLIGNDIKSLH 60 Query: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG 120 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG Sbjct: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERG 120 Query: 121 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW 180 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW Sbjct: 121 ITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVW 180 Query: 181 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM 240 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM Sbjct: 181 RQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVM 240 Query: 241 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS 300 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS Sbjct: 241 KEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFS 300 Query: 301 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL 360 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL Sbjct: 301 ENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEERNYEFL 360 Query: 361 QWYKDDLCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAIHNINGNCTERISRLLLPFADQ 420 ERISRLLLPFADQ Sbjct: 361 -----------------------------------------------ERISRLLLPFADQ 373 Query: 421 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL 480 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL Sbjct: 374 HVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAAARRAEREGEKKHRQNNEAERLLL 433 Query: 481 AGVEIPEPVFFCTIEPPSLSKQPGI 505 AGVEIPEPVFFCTIEPPSLSKQP + Sbjct: 434 AGVEIPEPVFFCTIEPPSLSKQPDL 458 >gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] Length = 751 Score = 268 bits (684), Expect = 1e-71 Identities = 170/412 (41%), Positives = 230/412 (55%), Gaps = 34/412 (8%) Query: 66 PIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGD---TVTDFMAQERERGIT 122 P KIRNIGI AHID+GKTT TER+LYY+G + +V D V D M ER+RGIT Sbjct: 42 PNEKIRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGIT 101 Query: 123 IQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQ 182 IQSAA WK +N+IDTPGHVDFT+EVER LRVLDGAV V A GV+ QT+TV RQ Sbjct: 102 IQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQ 161 Query: 183 ADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVMKE 242 ++N+P + F+NK+D+ G++ A++ +R KL +Q+P+G FKG+VD++ + Sbjct: 162 MKRYNVPFLTFINKLDRMGSNPARALQQMRSKLNHNAAFMQIPMGLEGNFKGIVDLIEER 221 Query: 243 KLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFSEN 302 + + DG DF + EL T+ R LIE VA+ D++ ++ LEE Sbjct: 222 AIYF-----DG-DFGQIVRYGEIPAELRAAATDHRQELIECVANSDEQLGEMFLEE---- 271 Query: 303 FDLLPAEKLQTAIHRVTLAQTAVPVLCGSALKNKGIQPLLDAVTMYLPSPEE-RNYEFLQ 361 + L+ AI R TL ++ PV GSALKNKG+QPLLDAV YLP+P E +NY L Sbjct: 272 -KIPSISDLKLAIRRATLKRSFTPVFLGSALKNKGVQPLLDAVLEYLPNPSEVQNYAILN 330 Query: 362 WYKDD-----------------LCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAIHNING 404 D LAFK L + G L ++R Y G +K I+N Sbjct: 331 KEDDSKEKTKILMNSSRDNSHPFVGLAFK-LEVGRFGQLTYVRSYQGELKKGDTIYNTRT 389 Query: 405 NCTERISRLLLPFADQHVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALA 456 R+ RL AD ++ + AG+I G+ A+GDT +S L+ Sbjct: 390 RKKVRLQRLARMHADMMEDVEEVYAGDICALFGI-DCASGDTFTDKANSGLS 440 >gi|4503483 eukaryotic translation elongation factor 2 [Homo sapiens] Length = 858 Score = 99.4 bits (246), Expect = 7e-21 Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 20/149 (13%) Query: 68 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDT-VTDFMAQERERGITIQSA 126 A IRN+ ++AH+D GK+T T+ ++ +G S G+T TD E+ER ITI+S Sbjct: 17 ANIRNMSVIAHVDHGKSTLTDSLVCKAGIIAS---ARAGETRFTDTRKDEQERCITIKST 73 Query: 127 AVTF----------------DWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASA 170 A++ D G+ +NLID+PGHVDF+ EV LRV DGA+ V D + Sbjct: 74 AISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVS 133 Query: 171 GVEAQTLTVWRQADKHNIPRICFLNKMDK 199 GV QT TV RQA I + +NKMD+ Sbjct: 134 GVCVQTETVLRQAIAERIKPVLMMNKMDR 162 >gi|157426893 GUF1 GTPase homolog [Homo sapiens] Length = 669 Score = 97.8 bits (242), Expect = 2e-20 Identities = 56/141 (39%), Positives = 86/141 (60%), Gaps = 7/141 (4%) Query: 66 PIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITI-- 123 P+ IRN I+AH+D GK+T +R+L +G ++ + V D + ERERGIT+ Sbjct: 64 PVENIRNFSIVAHVDHGKSTLADRLLELTG---TIDKTKNNKQVLDKLQVERERGITVKA 120 Query: 124 QSAAVTFDWKG--YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWR 181 Q+A++ ++ +G Y +NLIDTPGHVDF+ EV R L G + V DA+ G++AQT+ + Sbjct: 121 QTASLFYNCEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFF 180 Query: 182 QADKHNIPRICFLNKMDKTGA 202 A + + I +NK+D A Sbjct: 181 LAFEAQLSVIPVINKIDLKNA 201 >gi|94966754 elongation factor Tu GTP binding domain containing 1 isoform 1 [Homo sapiens] Length = 1120 Score = 96.7 bits (239), Expect = 5e-20 Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 10/155 (6%) Query: 68 AKIRNIGIMAHIDAGKTTTTERILYYSGY--TRSLGDVDDGDTVTDFMAQERERGITIQS 125 A IRNI ++AH+D GKTT + ++ +G +R G + D+ D E+ RGIT++S Sbjct: 17 ANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSRED----EQIRGITMKS 72 Query: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWR 181 +A++ + + Y +NLID+PGHVDF+ EV +R+ DG + V DA GV QT V R Sbjct: 73 SAISLHYATGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLR 132 Query: 182 QADKHNIPRICFLNKMDKTGASFKYAVESIREKLK 216 QA NI + +NK+D+ K+ + LK Sbjct: 133 QAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLK 167 >gi|239756373 PREDICTED: similar to elongation factor Tu GTP binding domain containing 1 [Homo sapiens] Length = 263 Score = 74.7 bits (182), Expect = 2e-13 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%) Query: 68 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125 A IRNI ++AH+D GKTT + ++ +G S G + D+ D E+ RGIT++S Sbjct: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203 Query: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172 +A++ + + Y +NLID+PGH+DF+ +V +R+ DG + V DA GV Sbjct: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254 >gi|239750897 PREDICTED: similar to elongation factor Tu GTP binding domain containing 1 [Homo sapiens] Length = 263 Score = 74.7 bits (182), Expect = 2e-13 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%) Query: 68 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125 A IRNI ++AH+D GKTT + ++ +G S G + D+ D E+ RGIT++S Sbjct: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203 Query: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172 +A++ + + Y +NLID+PGH+DF+ +V +R+ DG + V DA GV Sbjct: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254 >gi|239745282 PREDICTED: similar to elongation factor Tu GTP binding domain containing 1 [Homo sapiens] Length = 263 Score = 74.7 bits (182), Expect = 2e-13 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%) Query: 68 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125 A IRNI ++AH+D GKTT + ++ +G S G + D+ D E+ RGIT++S Sbjct: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203 Query: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172 +A++ + + Y +NLID+PGH+DF+ +V +R+ DG + V DA GV Sbjct: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254 >gi|217272894 elongation factor Tu GTP binding domain containing 2 isoform b [Homo sapiens] Length = 937 Score = 70.5 bits (171), Expect = 4e-12 Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 6/135 (4%) Query: 70 IRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVT 129 IRN+ + H+ GKT + ++ + + D TD + E+ERG+ I+S VT Sbjct: 94 IRNVTLCGHLHHGKTCFVDCLIEQT-HPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVT 152 Query: 130 F---DWKG--YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQAD 184 D KG Y N++DTPGHV+F+ EV LR+ DG V DA+ GV T + + A Sbjct: 153 VVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAV 212 Query: 185 KHNIPRICFLNKMDK 199 + + +NK+D+ Sbjct: 213 QERLAVTVCINKIDR 227 >gi|217272892 elongation factor Tu GTP binding domain containing 2 isoform a [Homo sapiens] Length = 972 Score = 70.5 bits (171), Expect = 4e-12 Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 6/135 (4%) Query: 70 IRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVT 129 IRN+ + H+ GKT + ++ + + D TD + E+ERG+ I+S VT Sbjct: 129 IRNVTLCGHLHHGKTCFVDCLIEQT-HPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVT 187 Query: 130 F---DWKG--YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQAD 184 D KG Y N++DTPGHV+F+ EV LR+ DG V DA+ GV T + + A Sbjct: 188 VVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAV 247 Query: 185 KHNIPRICFLNKMDK 199 + + +NK+D+ Sbjct: 248 QERLAVTVCINKIDR 262 >gi|94966752 elongation factor Tu GTP binding domain containing 1 isoform 2 [Homo sapiens] Length = 1069 Score = 68.2 bits (165), Expect = 2e-11 Identities = 35/82 (42%), Positives = 47/82 (57%) Query: 135 YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNIPRICFL 194 Y +NLID+PGHVDF+ EV +R+ DG + V DA GV QT V RQA NI + + Sbjct: 35 YLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVI 94 Query: 195 NKMDKTGASFKYAVESIREKLK 216 NK+D+ K+ + LK Sbjct: 95 NKIDRLIVELKFTPQEAYSHLK 116 >gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo sapiens] Length = 462 Score = 60.8 bits (146), Expect = 3e-09 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 21/150 (14%) Query: 72 NIGIMAHIDAGKTTTTERILYYSG---------YTRSLGDVDDGDT----VTDFMAQERE 118 NI ++ H+D+GK+TTT ++Y G + + ++ G V D + ERE Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68 Query: 119 RGITIQSAAVTFDWKGYRVNLIDTPGHVDF-------TLEVERCLRVLDGAVAVFDASAG 171 RGITI + F+ Y V +ID PGH DF T + + + ++ V F+A Sbjct: 69 RGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGIS 128 Query: 172 VEAQTLTVWRQADKHNIPR-ICFLNKMDKT 200 QT A + + I +NKMD T Sbjct: 129 KNGQTREHALLAYTLGVKQLIVGVNKMDST 158 >gi|239757543 PREDICTED: similar to eukaryotic translation elongation factor 1 alpha 2 [Homo sapiens] Length = 444 Score = 60.5 bits (145), Expect = 4e-09 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 21/154 (13%) Query: 72 NIGIMAHIDAGKTTTTERILYYSG---------YTRSLGDVDDGDT----VTDFMAQERE 118 NI ++ H+D+GK+TTT ++Y G + + ++ G V D + ERE Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68 Query: 119 RGITIQSAAVTFDWKGYRVNLIDTPGHVDF-------TLEVERCLRVLDGAVAVFDASAG 171 RGITI + F+ Y + +ID PGH DF T + + + ++ V F+A Sbjct: 69 RGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGIS 128 Query: 172 VEAQTLTVWRQADKHNIPR-ICFLNKMDKTGASF 204 QT A + + I +NKMD T ++ Sbjct: 129 KNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAY 162 >gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo sapiens] Length = 463 Score = 60.5 bits (145), Expect = 4e-09 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 21/154 (13%) Query: 72 NIGIMAHIDAGKTTTTERILYYSG---------YTRSLGDVDDGDT----VTDFMAQERE 118 NI ++ H+D+GK+TTT ++Y G + + ++ G V D + ERE Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68 Query: 119 RGITIQSAAVTFDWKGYRVNLIDTPGHVDF-------TLEVERCLRVLDGAVAVFDASAG 171 RGITI + F+ Y + +ID PGH DF T + + + ++ V F+A Sbjct: 69 RGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGIS 128 Query: 172 VEAQTLTVWRQADKHNIPR-ICFLNKMDKTGASF 204 QT A + + I +NKMD T ++ Sbjct: 129 KNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAY 162 >gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2 [Homo sapiens] Length = 642 Score = 52.0 bits (123), Expect = 1e-06 Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 13/116 (11%) Query: 69 KIRNIGIMAHIDAGKTTTTERILY------------YSGYTRSLGDVDDGDT-VTDFMAQ 115 ++ N+ ++ H+DAGK+T +LY Y ++ G V D + Sbjct: 217 QLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGE 276 Query: 116 ERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAG 171 ERERG+T+ F+ + L+D PGH DF + D AV V DAS G Sbjct: 277 ERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRG 332 >gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1 [Homo sapiens] Length = 684 Score = 52.0 bits (123), Expect = 1e-06 Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 13/116 (11%) Query: 69 KIRNIGIMAHIDAGKTTTTERILY------------YSGYTRSLGDVDDGDT-VTDFMAQ 115 ++ N+ ++ H+DAGK+T +LY Y ++ G V D + Sbjct: 259 QLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGE 318 Query: 116 ERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAG 171 ERERG+T+ F+ + L+D PGH DF + D AV V DAS G Sbjct: 319 ERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRG 374 >gi|34147630 Tu translation elongation factor, mitochondrial precursor [Homo sapiens] Length = 455 Score = 52.0 bits (123), Expect = 1e-06 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 11/132 (8%) Query: 72 NIGIMAHIDAGKTTTTERI--LYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVT 129 N+G + H+D GKTT T I + G ++ D + ER RGITI +A V Sbjct: 62 NVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPE----ERARGITINAAHVE 117 Query: 130 FDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQT---LTVWRQADKH 186 + D PGH D+ + LDG + V A+ G QT L + RQ Sbjct: 118 YSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVE 177 Query: 187 NIPRICFLNKMD 198 ++ + ++NK D Sbjct: 178 HV--VVYVNKAD 187 >gi|53729339 mitochondrial translational initiation factor 2 precursor [Homo sapiens] Length = 727 Score = 49.3 bits (116), Expect = 8e-06 Identities = 60/232 (25%), Positives = 89/232 (38%), Gaps = 52/232 (22%) Query: 73 IGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDW 132 + IM H+D GKTT ++ + V+ G GIT A Sbjct: 183 VTIMGHVDHGKTTLLDKFR-----KTQVAAVETG-------------GITQHIGAFLVSL 224 Query: 133 -KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNIPRI 191 G ++ +DTPGH F+ R +V D V V A GV QT+ + A +P I Sbjct: 225 PSGEKITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQVPII 284 Query: 192 CFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVMKEKLLWNCNSN 251 +NK DK E+ EK+K + L DVV ++ Sbjct: 285 LAVNKCDK--------AEADPEKVKKELL--------------AYDVVCEDY-------- 314 Query: 252 DGKDFERKPLLEMNDPEL--LKETTEARNALIEQVADLDDEFADLVLEEFSE 301 G D + P+ + L L E T A ++E AD + V+E F++ Sbjct: 315 -GGDVQAVPVSALTGDNLMALAEATVALAEMLELKADPNGPVEGTVIESFTD 365 >gi|53729337 mitochondrial translational initiation factor 2 precursor [Homo sapiens] Length = 727 Score = 49.3 bits (116), Expect = 8e-06 Identities = 60/232 (25%), Positives = 89/232 (38%), Gaps = 52/232 (22%) Query: 73 IGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDW 132 + IM H+D GKTT ++ + V+ G GIT A Sbjct: 183 VTIMGHVDHGKTTLLDKFR-----KTQVAAVETG-------------GITQHIGAFLVSL 224 Query: 133 -KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNIPRI 191 G ++ +DTPGH F+ R +V D V V A GV QT+ + A +P I Sbjct: 225 PSGEKITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQVPII 284 Query: 192 CFLNKMDKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVMKEKLLWNCNSN 251 +NK DK E+ EK+K + L DVV ++ Sbjct: 285 LAVNKCDK--------AEADPEKVKKELL--------------AYDVVCEDY-------- 314 Query: 252 DGKDFERKPLLEMNDPEL--LKETTEARNALIEQVADLDDEFADLVLEEFSE 301 G D + P+ + L L E T A ++E AD + V+E F++ Sbjct: 315 -GGDVQAVPVSALTGDNLMALAEATVALAEMLELKADPNGPVEGTVIESFTD 365 >gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] Length = 499 Score = 44.3 bits (103), Expect = 3e-04 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 25/186 (13%) Query: 55 DIKSLHSIINPPIAKIR---NIGIMAHIDAGKTTTTERILYYSG---------YTRSLGD 102 +I S++ PP A + N+ + H+DAGK+T +I+Y +G Y R + Sbjct: 56 EIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE 115 Query: 103 VDDG----DTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRV 158 + D +ER++G T++ F+ + ++D PGH F + Sbjct: 116 KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ 175 Query: 159 LDGAVAVFDASAGVEAQTLTVWRQADKHNI--------PRICFLNKMDKTGASF-KYAVE 209 D AV V A G Q +H + I +NKMD ++ E Sbjct: 176 ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYE 235 Query: 210 SIREKL 215 +EKL Sbjct: 236 ECKEKL 241 >gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] Length = 636 Score = 44.3 bits (103), Expect = 3e-04 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 25/186 (13%) Query: 55 DIKSLHSIINPPIAKIR---NIGIMAHIDAGKTTTTERILYYSG---------YTRSLGD 102 +I S++ PP A + N+ + H+DAGK+T +I+Y +G Y R + Sbjct: 193 EIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE 252 Query: 103 VDDG----DTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRV 158 + D +ER++G T++ F+ + ++D PGH F + Sbjct: 253 KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ 312 Query: 159 LDGAVAVFDASAGVEAQTLTVWRQADKHNI--------PRICFLNKMDKTGASF-KYAVE 209 D AV V A G Q +H + I +NKMD ++ E Sbjct: 313 ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYE 372 Query: 210 SIREKL 215 +EKL Sbjct: 373 ECKEKL 378 >gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] Length = 637 Score = 44.3 bits (103), Expect = 3e-04 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 25/186 (13%) Query: 55 DIKSLHSIINPPIAKIR---NIGIMAHIDAGKTTTTERILYYSG---------YTRSLGD 102 +I S++ PP A + N+ + H+DAGK+T +I+Y +G Y R + Sbjct: 194 EIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE 253 Query: 103 VDDG----DTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRV 158 + D +ER++G T++ F+ + ++D PGH F + Sbjct: 254 KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ 313 Query: 159 LDGAVAVFDASAGVEAQTLTVWRQADKHNI--------PRICFLNKMDKTGASF-KYAVE 209 D AV V A G Q +H + I +NKMD ++ E Sbjct: 314 ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYE 373 Query: 210 SIREKL 215 +EKL Sbjct: 374 ECKEKL 379 >gi|84043963 eukaryotic translation initiation factor 5B [Homo sapiens] Length = 1220 Score = 44.3 bits (103), Expect = 3e-04 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 73 IGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAV-TFD 131 I ++ H+D GKT +++ + G + T+ + I Q+ + FD Sbjct: 634 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLE----AINEQTKMIKNFD 689 Query: 132 WKGYRVN---LIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNI 188 + R+ +IDTPGH F+ R + D A+ V D G+E QT+ Sbjct: 690 RENVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKC 749 Query: 189 PRICFLNKMDK 199 P I LNK+D+ Sbjct: 750 PFIVALNKIDR 760 >gi|46094014 peptide chain release factor 3 [Homo sapiens] Length = 628 Score = 42.0 bits (97), Expect = 0.001 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 25/186 (13%) Query: 55 DIKSLHSIINP---PIAKIRNIGIMAHIDAGKTTTTERILYYSG---------YTRSLGD 102 +I+ S+I P P + N+ + H+DAGK+T +I++ +G Y R + Sbjct: 185 EIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKE 244 Query: 103 VDDG----DTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRV 158 + D +ER++G T++ F+ + ++D PGH F + Sbjct: 245 KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQ 304 Query: 159 LDGAVAVFDASAGVEAQTLTVWRQADKHNI--------PRICFLNKMDKTGASFKY-AVE 209 D AV V A G Q +H + I +NKMD ++ E Sbjct: 305 ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYE 364 Query: 210 SIREKL 215 +EKL Sbjct: 365 ECKEKL 370 >gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-specific [Homo sapiens] Length = 596 Score = 37.4 bits (85), Expect = 0.033 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 36/130 (27%) Query: 72 NIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITI-------- 123 N+G++ HID+GKT R L + T + D Q RERGIT+ Sbjct: 9 NVGVLGHIDSGKTALA-RALSTTASTAAF----------DKQPQSRERGITLDLGFSCFS 57 Query: 124 --------------QSAAVTFDWKG---YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVF 166 Q+A G +V L+D PGH + +++D + V Sbjct: 58 VPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVI 117 Query: 167 DASAGVEAQT 176 D + G++ Q+ Sbjct: 118 DVTKGMQTQS 127 >gi|91208418 transcription elongation regulator 1 isoform 2 [Homo sapiens] Length = 1077 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Query: 242 EKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFSE 301 EK+ N +S K+ ER+ +E + E +E +AR+ EQ ++D E EE + Sbjct: 824 EKIAKNLDSEKEKELERQARIEASLREREREVQKARS---EQTKEIDREREQHKREEAIQ 880 Query: 302 NFDLLPAEKLQTA 314 NF L ++ ++++ Sbjct: 881 NFKALLSDMVRSS 893 >gi|21327715 transcription elongation regulator 1 isoform 1 [Homo sapiens] Length = 1098 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Query: 242 EKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFSE 301 EK+ N +S K+ ER+ +E + E +E +AR+ EQ ++D E EE + Sbjct: 845 EKIAKNLDSEKEKELERQARIEASLREREREVQKARS---EQTKEIDREREQHKREEAIQ 901 Query: 302 NFDLLPAEKLQTA 314 NF L ++ ++++ Sbjct: 902 NFKALLSDMVRSS 914 >gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] Length = 212 Score = 30.8 bits (68), Expect = 3.1 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 120 GITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTV 179 G+ + +T D K ++ + DT G F R GA+ V+D + LT Sbjct: 40 GVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT 99 Query: 180 W----RQADKHNIPRICFLNKMD 198 W RQ N+ + NK D Sbjct: 100 WLEDARQHSNSNMVIMLIGNKSD 122 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.136 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,720,625 Number of Sequences: 37866 Number of extensions: 806225 Number of successful extensions: 2103 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 2045 Number of HSP's gapped (non-prelim): 38 length of query: 513 length of database: 18,247,518 effective HSP length: 107 effective length of query: 406 effective length of database: 14,195,856 effective search space: 5763517536 effective search space used: 5763517536 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.