Guide to the Human Genome
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Name: RAB2A Sequence: fasta or formatted (212aa) NCBI GI: 4506365
Description:

RAB2A, member RAS oncogene family

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         20           2
 C cysteine            1.4          3           2
 D aspartate           4.7         10           1
 E glutamate           7.5         16           2
 F phenylalanine       4.7         10           1
 G glycine             9.9         21           3
 H histidine           2.8          6           1
 I isoleucine          9.0         19           3
 K lysine              5.7         12           2
 L leucine             6.1         13           3
 M methionine          2.4          5           1
 N asparagine          5.2         11           2
 P proline             0.9          2           1
 Q glutamine           5.2         11           2
 R arginine            5.2         11           2
 S serine              4.7         10           1
 T threonine           7.1         15           2
 V valine              3.8          8           1
 W tryptophan          0.9          2           1
 Y tyrosine            3.3          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB2A, member RAS oncogene family 
RAB2B                 0.839   RAB2B protein isoform 1 
RAB2B                 0.614   RAB2B protein isoform 2 
RAB14                 0.557   GTPase Rab14 
RAB4A                 0.483   RAB4A, member RAS oncogene family 
RAB4B                 0.468   ras-related GTP-binding protein 4b 
RAB8B                 0.418   RAB8B, member RAS oncogene family 
RAB11B                0.408   RAB11B, member RAS oncogene family 
RAB11A                0.403   Ras-related protein Rab-11A 
RAB1A                 0.401   RAB1A, member RAS oncogene family isoform 1 
RAB8A                 0.399   mel transforming oncogene 
RAB13                 0.394   RAB13, member RAS oncogene family 
RAB1B                 0.391   RAB1B, member RAS oncogene family 
RAB39B                0.389   RAB39B, member RAS oncogene family 
RAB39                 0.389   RAB39, member RAS oncogene family 
LOC100131294          0.389   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.389   PREDICTED: similar to hCG24991 
LOC100131294          0.389   PREDICTED: similar to hCG24991 
RAB18                 0.381   RAB18, member RAS oncogene family 
RAB10                 0.379   ras-related GTP-binding protein RAB10 
RAB37                 0.374   RAB37, member RAS oncogene family isoform 2 
RAB37                 0.369   RAB37, member RAS oncogene family isoform 3 
RAB25                 0.369   RAB25 
RAB43                 0.361   RAB43 protein 
RAB30                 0.351   RAB30, member RAS oncogene family 
RAB19                 0.349   RAB19, member RAS oncogene family 
RAB26                 0.349   RAB26, member RAS oncogene family 
RAB3A                 0.324   RAB3A, member RAS oncogene family 
RAB5C                 0.324   RAB5C, member RAS oncogene family isoform a 
RAB5C                 0.324   RAB5C, member RAS oncogene family isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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