Guide to the Human Genome
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Name: EEF2 Sequence: fasta or formatted (858aa) NCBI GI: 4503483
Description:

eukaryotic translation elongation factor 2

Referenced in:

Small RNAs in RNA Processing
Capping and Splicing
Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         62           2
 C cysteine            2.0         17           1
 D aspartate           6.1         52           2
 E glutamate           7.2         62           2
 F phenylalanine       4.1         35           1
 G glycine             7.7         66           3
 H histidine           1.9         16           1
 I isoleucine          6.3         54           2
 K lysine              7.6         65           2
 L leucine             8.5         73           2
 M methionine          3.3         28           2
 N asparagine          3.1         27           1
 P proline             5.4         46           2
 Q glutamine           3.4         29           1
 R arginine            5.1         44           2
 S serine              5.1         44           2
 T threonine           4.8         41           2
 V valine              8.0         69           3
 W tryptophan          0.8          7           1
 Y tyrosine            2.4         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation elongation factor 2 
EFTUD2                0.358   elongation factor Tu GTP binding domain containing ...
EFTUD2                0.358   elongation factor Tu GTP binding domain containing ...
EFTUD1                0.133   elongation factor Tu GTP binding domain containing 1...
EFTUD1                0.118   elongation factor Tu GTP binding domain containing 1...
GFM2                  0.065   mitochondrial elongation factor G2 isoform 1 
LOC727963             0.061   PREDICTED: similar to elongation factor Tu GTP bind...
LOC727963             0.061   PREDICTED: similar to elongation factor Tu GTP bind...
LOC727963             0.061   PREDICTED: similar to elongation factor Tu GTP bind...
GFM1                  0.045   G elongation factor, mitochondrial 1 
GUF1                  0.044   GUF1 GTPase homolog 
GFM2                  0.044   mitochondrial elongation factor G2 isoform 2 
GFM2                  0.044   mitochondrial elongation factor G2 isoform 3 
EEF1A1                0.017   eukaryotic translation elongation factor 1 alpha 1 [H...
LOC100293909          0.015   PREDICTED: similar to eukaryotic translation elonga...
EEF1A2                0.015   eukaryotic translation elongation factor 1 alpha 2 [H...
TUFM                  0.014   Tu translation elongation factor, mitochondrial prec...
MTIF2                 0.014   mitochondrial translational initiation factor 2 prec...
MTIF2                 0.014   mitochondrial translational initiation factor 2 prec...
EEFSEC                0.012   eukaryotic elongation factor, selenocysteine-tRNA-sp...
LOC648809             0.011   PREDICTED: similar to elongation factor Tu GTP bind...
LOC648809             0.011   PREDICTED: similar to elongation factor Tu GTP bind...
LOC648809             0.011   PREDICTED: similar to elongation factor Tu GTP bind...
HBS1L                 0.011   Hsp70 subfamily B suppressor 1-like protein isoform...
HBS1L                 0.011   Hsp70 subfamily B suppressor 1-like protein isoform 1...
EIF5B                 0.011   eukaryotic translation initiation factor 5B 
PTK2B                 0.004   PTK2B protein tyrosine kinase 2 beta isoform b [Homo...
MRPS27                0.004   mitochondrial ribosomal protein S27 
PTK2B                 0.004   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
PTK2B                 0.004   PTK2B protein tyrosine kinase 2 beta isoform a [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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