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Search of human proteins with 122114658
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
(1842 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122114658 hypothetical protein LOC23053 [Homo sapiens] 3764 0.0
gi|190885491 zinc finger, SWIM-type containing 4 [Homo sapiens] 224 5e-58
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 186 1e-46
gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens] 181 8e-45
gi|18677735 proline-rich coiled-coil 1 [Homo sapiens] 51 9e-06
gi|146134388 YLP motif containing 1 [Homo sapiens] 50 2e-05
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 50 2e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 50 2e-05
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 50 3e-05
gi|55750053 atrophin-1 [Homo sapiens] 50 3e-05
gi|55750041 atrophin-1 [Homo sapiens] 50 3e-05
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 49 3e-05
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 49 6e-05
gi|116284392 mucin 2 precursor [Homo sapiens] 49 6e-05
gi|12707580 paired-like homeobox 2b [Homo sapiens] 49 6e-05
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 49 6e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 48 8e-05
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 48 8e-05
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 48 8e-05
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 48 1e-04
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 48 1e-04
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 47 1e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 1e-04
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 47 2e-04
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 47 2e-04
gi|194272180 plexin B1 [Homo sapiens] 47 2e-04
gi|40254442 plexin B1 [Homo sapiens] 47 2e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 47 2e-04
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 46 3e-04
gi|6912752 zinc finger protein 281 [Homo sapiens] 46 3e-04
>gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
Length = 1842
Score = 3764 bits (9760), Expect = 0.0
Identities = 1842/1842 (100%), Positives = 1842/1842 (100%)
Query: 1 MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG 60
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
Sbjct: 1 MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG 60
Query: 61 GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI 120
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
Sbjct: 61 GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI 120
Query: 121 RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR 180
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
Sbjct: 121 RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR 180
Query: 181 CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI 240
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
Sbjct: 181 CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI 240
Query: 241 SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK 300
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
Sbjct: 241 SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK 300
Query: 301 TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR 360
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
Sbjct: 301 TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR 360
Query: 361 RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC 420
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
Sbjct: 361 RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC 420
Query: 421 DEMVTLWRLAVLDPALSPQRRRELCTQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE 480
DEMVTLWRLAVLDPALSPQRRRELCTQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
Sbjct: 421 DEMVTLWRLAVLDPALSPQRRRELCTQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE 480
Query: 481 ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPSRPGASRSGGLEESRDRPRPLPTEPAV 540
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPSRPGASRSGGLEESRDRPRPLPTEPAV
Sbjct: 481 ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPSRPGASRSGGLEESRDRPRPLPTEPAV 540
Query: 541 RPKEPGTKRKGLGEGVPSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGSKGSAG 600
RPKEPGTKRKGLGEGVPSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGSKGSAG
Sbjct: 541 RPKEPGTKRKGLGEGVPSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGSKGSAG 600
Query: 601 GGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPLHGGSRGPSTFL 660
GGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPLHGGSRGPSTFL
Sbjct: 601 GGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPLHGGSRGPSTFL 660
Query: 661 PEPPDTYEEDGGVYFSEGPEPPTASVGPPGLLPGDVCTQDDLPSTDESGNGLPKTKEAAP 720
PEPPDTYEEDGGVYFSEGPEPPTASVGPPGLLPGDVCTQDDLPSTDESGNGLPKTKEAAP
Sbjct: 661 PEPPDTYEEDGGVYFSEGPEPPTASVGPPGLLPGDVCTQDDLPSTDESGNGLPKTKEAAP 720
Query: 721 AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL 780
AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL
Sbjct: 721 AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL 780
Query: 781 HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLSKAAFL 840
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLSKAAFL
Sbjct: 781 HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLSKAAFL 840
Query: 841 LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS 900
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS
Sbjct: 841 LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS 900
Query: 901 TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNSETPGDEEL 960
TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNSETPGDEEL
Sbjct: 901 TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNSETPGDEEL 960
Query: 961 GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE 1020
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
Sbjct: 961 GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE 1020
Query: 1021 SQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG 1080
SQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG
Sbjct: 1021 SQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG 1080
Query: 1081 PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK 1140
PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
Sbjct: 1081 PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK 1140
Query: 1141 KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS 1200
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
Sbjct: 1141 KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS 1200
Query: 1201 SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN 1260
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
Sbjct: 1201 SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN 1260
Query: 1261 SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA 1320
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
Sbjct: 1261 SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA 1320
Query: 1321 MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN 1380
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
Sbjct: 1321 MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN 1380
Query: 1381 EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR 1440
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
Sbjct: 1381 EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR 1440
Query: 1441 EGATSCSASGIRAGGEAGRGMPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGP 1500
EGATSCSASGIRAGGEAGRGMPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGP
Sbjct: 1441 EGATSCSASGIRAGGEAGRGMPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGP 1500
Query: 1501 GLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPA 1560
GLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPA
Sbjct: 1501 GLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPA 1560
Query: 1561 FLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSV 1620
FLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSV
Sbjct: 1561 FLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSV 1620
Query: 1621 HPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLAL 1680
HPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLAL
Sbjct: 1621 HPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLAL 1680
Query: 1681 EMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEI 1740
EMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEI
Sbjct: 1681 EMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEI 1740
Query: 1741 VMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSAR 1800
VMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSAR
Sbjct: 1741 VMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSAR 1800
Query: 1801 SAFCLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMATFSP 1842
SAFCLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMATFSP
Sbjct: 1801 SAFCLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMATFSP 1842
>gi|190885491 zinc finger, SWIM-type containing 4 [Homo sapiens]
Length = 989
Score = 224 bits (572), Expect = 5e-58
Identities = 160/445 (35%), Positives = 219/445 (49%), Gaps = 67/445 (15%)
Query: 46 KQSAG-PNSPTGGGGGGGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQL 104
K+S G P P G G+ R R L++LSAK+VA FE VE+ + VPE +
Sbjct: 7 KRSRGCPAGPEERDAGAGAARGRGRPEA---LLDLSAKRVAESWAFEQVEERFSRVPEPV 63
Query: 105 QLRIAFWSFPENEEDIRLYSCLA----NGSADE---FQRGDQLFRMRAVKDPLQIGFHLS 157
Q RI FWSFP +E +I +YS L G D F RG L + AV LQ+GFHLS
Sbjct: 64 QKRIVFWSFPRSEREICMYSSLGYPPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLS 123
Query: 158 ATVVPPQMV-PPKGAYNVAVMFDRCRVTSCSCTC-GAGAKWCTHVVALCLFRIHNASAVC 215
+ P P+ Y+V++ FDRC++TS SC C +C HVVAL L+RI +A V
Sbjct: 124 GNIREPGSPGEPERLYHVSISFDRCKITSVSCGCDNRDLFYCAHVVALSLYRIRHAHQVE 183
Query: 216 LRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDP 275
LR P+SE+LS++ RDQLQKF QYLIS ++LPTAQRL DE+L S IN V GAPDP
Sbjct: 184 LRLPISETLSQMNRDQLQKFVQYLISAHHTEVLPTAQRLADEILLLGS-EINLVNGAPDP 242
Query: 276 TAGPSASDQSTWYLDESTLTDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACL 335
TAG D + W+LDE + + +K+ L N Y +++
Sbjct: 243 TAGAGIEDANCWHLDEEQIQEQVKQLLS-------------NGGYYGASQQ--------- 280
Query: 336 LRPLRGREPEGVWNLLSIVREMFKRRDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASH 395
+ ++ S VREM + RDSN A +L ++T+Q L ++ W
Sbjct: 281 -----------LRSMFSKVREMLRMRDSNGARMLILMTEQFLQDTRLALW---------R 320
Query: 396 SSASGHTGRSNGQSEVAAHACASMCDEMVTLWRLAVLDPALSPQRRRELCTQLRQWQLKV 455
+G T + C + DE+ LW VL P P+ R L +W
Sbjct: 321 QQGAGMTDK-----------CRQLWDELGALWVCVVLSPHCKPEERAGWLQLLSRWDKLD 369
Query: 456 IENVKRGQHKKTLERLFPGFRPAVE 480
+ ++ G + L P PA E
Sbjct: 370 VCPLEEGNYSFDGPSLQPTMAPAPE 394
Score = 65.5 bits (158), Expect = 5e-10
Identities = 77/285 (27%), Positives = 111/285 (38%), Gaps = 46/285 (16%)
Query: 1568 YSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFP 1627
YS+ P AAT V+ +T + T L L TS ELW ++ A P
Sbjct: 716 YSLFTPVEAATIVA--------VTGTTHATLLRLQLDTSRREELWACARTLALQCAMKDP 767
Query: 1628 AIQGASLPALTTQPS-------------PLVSGGFPPPEEETHSQPVNPHSLHHLHAAYR 1674
Q +LPALT +GG T ++ + L AY+
Sbjct: 768 --QNCALPALTLCEKNHSAFEAAYQIVLDAAAGGLGHAHLFTVARYMEHRGLPL--RAYK 823
Query: 1675 VGMLALEMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLG-----------VNYVHQF 1723
+ LAL L + D S P +DV W L+ LG + +H
Sbjct: 824 LATLALAQLSIAFNQD-------SHPAVNDVLWACSLSHSLGRHELSAIVPLIIRSIH-- 874
Query: 1724 CVGAAKGVLSPFVLQEIVMETLQRLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIH 1783
C +L + L + L A RAP QL+ AY+ H RL H
Sbjct: 875 CAPMLSDILRRWTLSAPGLGPLGARRAAKPLGADRAPLC-QLLDAAVTAYITTSHSRLTH 933
Query: 1784 LTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKE 1828
++P Y DF+ + AR F L P G +QF+ L+NLK++ + K+
Sbjct: 934 ISPRHYGDFIEFLGKARETFLLAPDGHLQFSQFLENLKQTYKGKK 978
Score = 33.9 bits (76), Expect = 1.5
Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 20/146 (13%)
Query: 1278 PHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALTILVECWDG 1337
P L A E+GL + + V W R V W+ A EIG AL +++ W
Sbjct: 662 PDTTLLGIALELGLQVMRMTLNVM-TWRRREM---VRWLVSCATEIGPQALMNIMQNWYS 717
Query: 1338 HLTPPEVASLAD------------RASRARDSNMVRAAAELALSCLPHAHALNPNEIQRA 1385
TP E A++ + +R + A LAL C A N A
Sbjct: 718 LFTPVEAATIVAVTGTTHATLLRLQLDTSRREELWACARTLALQC---AMKDPQNCALPA 774
Query: 1386 LVQCKEQDNLMLEKACMAVEEAAKGG 1411
L C E+++ E A V +AA GG
Sbjct: 775 LTLC-EKNHSAFEAAYQIVLDAAAGG 799
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 186 bits (473), Expect = 1e-46
Identities = 143/487 (29%), Positives = 207/487 (42%), Gaps = 94/487 (19%)
Query: 29 SFISEAESLCQ----NWRGWRKQSAGPNSPTGGGGGGGSGGTRMRDGLVIPLVELSAKQV 84
SF +C N G G +S GGG GGG GG SA
Sbjct: 113 SFPRSEREICMYSSFNTGGGAAGGPGDDSGGGGGAGGGGGGGSSSSPAATSAAATSAAAA 172
Query: 85 AFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGSADEFQRGDQLFRMR 144
A P + + ++ RL F+RG L
Sbjct: 173 AAAAAAAAAAAAGAGAPS-----VGAAGAADGGDETRL----------PFRRGIALLESG 217
Query: 145 AVKDPLQIGFHLSATVVPPQMVP-PKGAYNVAVMFDRCRVTSCSCTCG-AGAKWCTHVVA 202
V + LQ+GFHLS TV P + P+ NVA+ FDRC++TS +C+CG +C HVVA
Sbjct: 218 CVDNVLQVGFHLSGTVTEPAIQSEPETVCNVAISFDRCKITSVTCSCGNKDIFYCAHVVA 277
Query: 203 LCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQ 262
L L+RI V L P+SE+L ++ RDQLQKF QYLI+ ++LPTAQ+L DE+L SQ
Sbjct: 278 LSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEIL-SQ 336
Query: 263 STAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKKTLHKFCGPSPVVFSDVNSMYLS 322
++ IN V GAPDPTAG S D++ W+LDE + + +K ++LS
Sbjct: 337 NSEINQVHGAPDPTAGASIDDENCWHLDEEQVQEQVK-------------------LFLS 377
Query: 323 STEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKRRDSNAAPLLEILTDQCLTYEQI 382
+ + L L + VREM K RDSN A +L ++T+Q + ++
Sbjct: 378 QGGYHGSGKQLNL--------------LFAKVREMLKMRDSNGARMLTLITEQFMADPRL 423
Query: 383 TGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVTLWRLAVLDPALSPQRRR 442
+ W Q + DE+ LW VL+P +++
Sbjct: 424 SLW--------------------RQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKA 463
Query: 443 ELCTQLRQWQLKVIENVKRGQHKKTLERLFPG-------------------FRPAVEACY 483
QL++W + + G H L L F A+EAC
Sbjct: 464 SWLKQLKKWNSVDVCPWEDGNHGSELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACD 523
Query: 484 FNWEEAY 490
+W++++
Sbjct: 524 LHWQDSH 530
Score = 55.8 bits (133), Expect = 4e-07
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 16/166 (9%)
Query: 1672 AYRVGMLALEMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGV 1731
AY++ LA+ L + D + P +DV W L+ LG N + K V
Sbjct: 1046 AYKLATLAMTHLNLSYNQD-------THPAINDVLWACALSHSLGKNELAAIIPLVVKSV 1098
Query: 1732 LSPFVLQEIVME---TLQRLSPAHAHNH------LRAPAFHQLVQRCQQAYMQYIHHRLI 1782
VL +I+ T + H + L QL+ AY+ H RL
Sbjct: 1099 KCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLT 1158
Query: 1783 HLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKE 1828
H++P Y +F+ + AR F + G +QF + NLK+ + K+
Sbjct: 1159 HISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKGKK 1204
Score = 54.3 bits (129), Expect = 1e-06
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 27/116 (23%)
Query: 50 GPNSPTGGGGGGGSGGTRMRDG-------------------LVIP--------LVELSAK 82
G S GGGG GG + R G L+ P L++++A+
Sbjct: 24 GGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGGGAALGLLPPGKTQSPESLLDIAAR 83
Query: 83 QVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGSADEFQRGD 138
+VA PF+ VE+ + +PE +Q RI +WSFP +E +I +YS G GD
Sbjct: 84 RVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGGGAAGGPGD 139
Score = 37.4 bits (85), Expect = 0.14
Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 27/160 (16%)
Query: 1278 PHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALTILVECWDG 1337
P L + E+GL + + + NW R V W+ A E+G AL +++ W
Sbjct: 887 PDITLLKVSLELGLQVMRM-TLSTLNWRRREM---VRWLVTCATEVGVYALDSIMQTWFT 942
Query: 1338 HLTPPEVASLADRASRA------------RDSNMVRAAAELALSCL---PHAHALNPNEI 1382
TP E S+ + + + +A LAL C P AL+
Sbjct: 943 LFTPTEATSIVATTVMSNSTIVRLHLDCHQQEKLASSARTLALQCAMKDPQNCALS---- 998
Query: 1383 QRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVA 1422
AL C E+D++ E A V +AA G Y + LF +A
Sbjct: 999 --ALTLC-EKDHIAFETAYQIVLDAATTGMSYTQ-LFTIA 1034
>gi|149944451 zinc finger, SWIM domain containing 5 [Homo sapiens]
Length = 1185
Score = 181 bits (458), Expect = 8e-45
Identities = 117/327 (35%), Positives = 165/327 (50%), Gaps = 60/327 (18%)
Query: 129 GSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVP-PKGAYNVAVMFDRCRVTSCS 187
G F+RG +L +V++ LQ+GFHLS TV P Y VA+ FDRC++TS +
Sbjct: 175 GEGLPFRRGIRLLDSGSVENVLQVGFHLSGTVTELATASEPAVTYKVAISFDRCKITSVT 234
Query: 188 CTCG-AGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQ 246
C CG +C HVVAL L+RI V LR P+SE+L ++ RDQLQKF QYLI+ +
Sbjct: 235 CGCGNKDIFYCAHVVALSLYRIRKPDQVKLRLPISETLFQMNRDQLQKFIQYLITAHHTE 294
Query: 247 ILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKKTLHK-- 304
+LPTAQ+L DE+LSS S IN V GAPDPTAG S D++ W+LDE + + +K L +
Sbjct: 295 VLPTAQKLADEILSSNS-EINQVNGAPDPTAGASIDDENCWHLDEEQVKEQVKLFLSQGG 353
Query: 305 FCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKRRDSN 364
+CG +NSM+ VREM + RDSN
Sbjct: 354 YCGSG----KQLNSMFAK-------------------------------VREMLRMRDSN 378
Query: 365 AAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMV 424
A +L ++T+Q + ++T W R G + C + DE+
Sbjct: 379 GARMLTLITEQFVADPRLTLW------------------RQQGTN--MTDKCRQLWDELG 418
Query: 425 TLWRLAVLDPALSPQRRRELCTQLRQW 451
LW +L+P + + QL++W
Sbjct: 419 ALWVCIILNPHCKLEEKSCWLQQLQKW 445
Score = 54.3 bits (129), Expect = 1e-06
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 1672 AYRVGMLALEMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGV 1731
A+++ LA+ L + D + P +DV W L+ LG N + K V
Sbjct: 1016 AFKLASLAMSHLNLAYNQD-------THPAINDVLWACALSHSLGKNELAALIPLVVKSV 1068
Query: 1732 LSPFVLQEIVMETLQ----------RLSPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRL 1781
VL +I+ R S + +AP QL+ AY+ H RL
Sbjct: 1069 HCATVLSDILRRCTVTAPGLAGIPGRRSSGKLMSTDKAP-LRQLLDATINAYINTTHSRL 1127
Query: 1782 IHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKE 1828
H++P Y +F+ + AR F L G +QF + NLK+ + K+
Sbjct: 1128 THISPRHYGEFIEFLSKARETFLLPQDGHLQFAQFIDNLKQIYKGKK 1174
Score = 53.1 bits (126), Expect = 2e-06
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 18 DSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGGGGSGGTRMRDGL----- 72
D EE S +S A+ C +W + + GGG GG G + + G
Sbjct: 3 DGGEREELLSPSPVSPAKRQC-SWPSPQAHHPRGSPGAAGGGAGGVGSSCLVLGARPHLQ 61
Query: 73 VIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYS 124
L++ +AK VA +E VE+ + +PE +Q RI +WSFP NE +I +YS
Sbjct: 62 PDSLLDCAAKTVAEKWAYERVEERFERIPEPVQRRIVYWSFPRNEREICMYS 113
Score = 40.0 bits (92), Expect = 0.021
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 1286 AFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALTILVECWDGHLTPPEVA 1345
A E+GL + + + NW R V W+ A E+G AL +++ W TP E
Sbjct: 865 ALELGLQVMRM-TLSTLNWRRREM---VRWLVTCATEVGVRALVSILQSWYTLFTPTEAT 920
Query: 1346 SLADRASRARDS------------NMVRAAAELALSCL---PHAHALNPNEIQRALVQCK 1390
S+ + + + + A LAL C P + AL+ AL C
Sbjct: 921 SIVAATAVSHTTILRLSLDYPQREELASCARTLALQCAMKDPQSCALS------ALTLC- 973
Query: 1391 EQDNLMLEKACMAVEEAAKGGGVYPEVLFEVA 1422
E+D++ E A +AA GG + + LF +A
Sbjct: 974 EKDHIAFEAAYQIAIDAAAGGMTHSQ-LFTIA 1004
>gi|18677735 proline-rich coiled-coil 1 [Homo sapiens]
Length = 445
Score = 51.2 bits (121), Expect = 9e-06
Identities = 41/126 (32%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 1468 PGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYL 1527
PGT P A A TA ++ PV +S + P + S Y+ QP LP
Sbjct: 12 PGTPPPNPAGLAATAMSST-PVPLAATSSFSSPNVSSMESFPPLAYSTPQPPLP------ 64
Query: 1528 THPAHPAHPMPHMPRPAVFPVPS--SAYPQGVHPAFLGA--QYPYSVTPPSLAATAVSFP 1583
P P+ P+P +P PAV VP ++ P V P+ A P S PPS +A P
Sbjct: 65 --PVRPSAPLPFVPPPAVPSVPPLVTSMPPPVSPSTAAAFGNPPVSHFPPSTSAPNTLLP 122
Query: 1584 VPSMAP 1589
P P
Sbjct: 123 APPSGP 128
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 50.4 bits (119), Expect = 2e-05
Identities = 53/181 (29%), Positives = 72/181 (39%), Gaps = 29/181 (16%)
Query: 1508 PGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMP--RPAVFP------------VPSSAY 1553
P PY+ + P LP P + P+ P P MP PA P +P+S
Sbjct: 518 PPFVPYSQMPPPLPTMPPPVLPPSLPP---PVMPPALPATVPPPGMPPPVMPPSLPTSVP 574
Query: 1554 PQGVHPAFLGAQYPYSVTPPSLAATAVS--FPVPSM---APITVHPY------HTEPGLP 1602
P G+ P+ A P + PPSL++ P PS+ AP V P PG+P
Sbjct: 575 PPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIP 634
Query: 1603 LPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVN 1662
P V + Q T + V PAS+ + Q P P+P+ G PP Q
Sbjct: 635 -PPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAG 693
Query: 1663 P 1663
P
Sbjct: 694 P 694
Score = 40.0 bits (92), Expect = 0.021
Identities = 48/176 (27%), Positives = 61/176 (34%), Gaps = 16/176 (9%)
Query: 492 LPGVTYSGTDRKLALCWARALPSRPGASRSGGLEESRDRPRPLPTEPAVR----PKEPGT 547
+PG DR A R P R G+ G L + R R P R P+ PG+
Sbjct: 1093 VPGGLQGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERIPPRRAGSRERGPPRGPGS 1152
Query: 548 KRKGLGEGVPSSQRGP-RRLSAEGGDKALHKMGPGGGKAKALGGAGSGSK-----GSAGG 601
+ +GLG RGP R +GG+K +A G G + G
Sbjct: 1153 RERGLGRSDFGRDRGPFRPEPGDGGEKMYPYHRDEPPRAPWNHGEERGHEEFPLDGRNAP 1212
Query: 602 GSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPLHGGS-RGP 656
+ RL D E D +L L F S PP H G RGP
Sbjct: 1213 MERERLDDWDRERYWRECERDYQDDTLELYNREDRF-----SAPPSRSHDGDRRGP 1263
Score = 37.0 bits (84), Expect = 0.18
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 1052 PSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHSPCEGLPSEAALTPR 1111
P PG+ P + P QP + PT ++ +P + P SP + PS++ L P
Sbjct: 151 PVPPGSYMPPSQSYMPPPQPPP---SYYPPTS--SQPYLPPAQP-SPSQSPPSQSYLAPT 204
Query: 1112 PE---GKVPSRLALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRP 1168
P S+ L Y SP RP + H+ + P + T+ + P
Sbjct: 205 PSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEP 264
Query: 1169 LRGG 1172
L G
Sbjct: 265 LESG 268
Score = 36.2 bits (82), Expect = 0.30
Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 21/144 (14%)
Query: 1524 PQYLTH-PAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSF 1582
PQ H P + RP ++P P S P P +G P S+ PS S
Sbjct: 1483 PQMADHLPPQESRLQNTSSRPGMYPPPGSYRP----PPPMGKP-PGSIVRPSAPPARSSV 1537
Query: 1583 PVPSMAPITVHPYHTEPGLPLP--------TSVACELWGQGTVSSVHPASTFPAIQG--- 1631
PV + P+ + P P LP P ++V E W + + + + +
Sbjct: 1538 PV-TRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFK 1596
Query: 1632 ---ASLPALTTQPSPLVSGGFPPP 1652
A++P+ P P V PPP
Sbjct: 1597 SETAAIPSAPVLPPPPVHSSIPPP 1620
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 50.1 bits (118), Expect = 2e-05
Identities = 50/179 (27%), Positives = 70/179 (39%), Gaps = 16/179 (8%)
Query: 1498 PGP-GLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHM---PRPAVFPVPSSAY 1553
PGP + P L+P A P L P+ + P H P++ P P V +PS+
Sbjct: 808 PGPHAMPVAPGPALYPAPAYTPELGLVPR--SSPQHGVVSSPYVGVGPAPPVAGLPSAPP 865
Query: 1554 PQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHP---YHTEPGLPLPTSVACE 1610
PQ P A P + T S+ A S P P P + P PLPT
Sbjct: 866 PQFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFPVPPPQPLPTPYTYP 925
Query: 1611 LWGQGTVSSVHPAST-----FPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPH 1664
+ + + H S+ FPA + P QP P + G PP++ Q +PH
Sbjct: 926 AGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQ--HPH 982
Score = 40.8 bits (94), Expect = 0.012
Identities = 48/177 (27%), Positives = 60/177 (33%), Gaps = 28/177 (15%)
Query: 1497 YPGPGLGHGHSPGL--HPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYP 1554
+P P +G P HP A P P P L HP H P P + P P S YP
Sbjct: 946 FPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHP----HLFPPQA-PGLLP-PQSPYP 999
Query: 1555 QGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVH----PYHTEPGLPLPTSVACE 1610
P LG PP L +P P+ P+ H P+ PG P P
Sbjct: 1000 YAPQPGVLGQ------PPPPLHTQL--YPGPAQDPLPAHSGALPF-PSPGPPQPPHPPLA 1050
Query: 1611 LWGQGTVSSVHPASTFPAIQGAS-------LPALTTQPSPLVSGGFPPPEEETHSQP 1660
+ + P + I+G S P L P+P G PP P
Sbjct: 1051 YGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPP 1107
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 50.1 bits (118), Expect = 2e-05
Identities = 59/213 (27%), Positives = 72/213 (33%), Gaps = 11/213 (5%)
Query: 1021 SQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG 1080
S + P LS + T SQRS + G+ + G Q G PG
Sbjct: 270 SDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPG 329
Query: 1081 PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGK-VPSRLALGSRGGYNGRGWGSPGRP 1139
+K SSP + AA TP GK PS + S G GR G GR
Sbjct: 330 SAHSPPDK---PSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR 386
Query: 1140 KKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSS 1199
+++ SSA P RG S R S S S S + G
Sbjct: 387 RRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRAR---SSSDSGSGRGAPGPGP 443
Query: 1200 SSGSRRASASGGARAKTVEVGRYKGRRPESHAP 1232
GS R G RAK R RP S +P
Sbjct: 444 EPGSERGHGGHGKRAKE----RPPRARPASTSP 472
Score = 34.7 bits (78), Expect = 0.88
Identities = 39/145 (26%), Positives = 47/145 (32%), Gaps = 23/145 (15%)
Query: 1034 SSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGA-GPGPTEGFTEKNVPE 1092
S+S P +R P P+ P S + + GS GA GPGP G
Sbjct: 399 SASAPRRRGRRRPR----PAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPG-------S 447
Query: 1093 SSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNG-----------RGWGSPGRPKK 1141
H E RP PS A G RGG G R W S P K
Sbjct: 448 ERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSK 507
Query: 1142 KHTGMASIDSSAPETTSDSSPTLSR 1166
+ A +P + LSR
Sbjct: 508 SRSRSAEKRPHSPSRSPSPKKPLSR 532
Score = 34.3 bits (77), Expect = 1.2
Identities = 43/148 (29%), Positives = 58/148 (39%), Gaps = 29/148 (19%)
Query: 1135 SPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDS 1194
SPGR +H+ +S S SDS R P R +P G+ +
Sbjct: 247 SPGRRSHRHSSGSSHSPSLSSHYSDS-----RSPSR--LSPKHRDEGRKT---------- 289
Query: 1195 LGSSSSSGSRRASASGGA--------RAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFY 1246
GS SSGSR S SGG+ G + GR +H+P P++PS +
Sbjct: 290 -GSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSP--PDKPSSPSPRVR 346
Query: 1247 FELAKTV-LIKAGGNSSTSIFTHPSSSG 1273
+ A A G S S + PSS G
Sbjct: 347 DKAAAAAPTPPARGKESPSPRSAPSSQG 374
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 49.7 bits (117), Expect = 3e-05
Identities = 61/194 (31%), Positives = 77/194 (39%), Gaps = 20/194 (10%)
Query: 1030 SSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKN 1089
+S ++S + AS S S PSA A P SG A P S +GA G+ +
Sbjct: 65 NSGWASFSASWASIPSDSGWASPSASWASTPSDSGWASP----SASGASIPSDSGWASPS 120
Query: 1090 VPESSPHSPCEGLPSEA-ALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRP-KKKHTGMA 1147
V +S S PS + A TP G + S + GW SP A
Sbjct: 121 VSGASIPSAFWASPSASGASTPSDSGWASPSASWASTS--SDSGWASPSASWTSPSASCA 178
Query: 1148 SIDSSAPETTSDS----------SPTLS--RRPLRGGWAPTSWGRGQDSDSISSSSSDSL 1195
S +S T SDS SP+ S P GWA T G S S S S +
Sbjct: 179 SSSASGASTPSDSGWASPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCISPSAS 238
Query: 1196 GSSSSSGSRRASAS 1209
G+S+SS S AS S
Sbjct: 239 GASTSSDSGWASPS 252
Score = 49.3 bits (116), Expect = 3e-05
Identities = 62/210 (29%), Positives = 87/210 (41%), Gaps = 33/210 (15%)
Query: 1016 LLDRESQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVA 1075
L R S P S ++SS + AS S S PSA GA P SG A P+ G+
Sbjct: 5 LFSRASGVSTPS--GSGWASSSASGASTPSNSGWASPSASGASIPSDSGWASPSASGAST 62
Query: 1076 GAGPG-PTEGFTEKNVPE----SSPHSPCEGLPSEAA-LTPRPEG-KVPSRLALGSRGGY 1128
+ G + + ++P +SP + PS++ +P G +PS
Sbjct: 63 PSNSGWASFSASWASIPSDSGWASPSASWASTPSDSGWASPSASGASIPS---------- 112
Query: 1129 NGRGWGSP-----GRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQD 1183
GW SP P ++ +S P + +SP+ S WA TS G
Sbjct: 113 -DSGWASPSVSGASIPSAFWASPSASGASTPSDSGWASPSAS-------WASTSSDSGWA 164
Query: 1184 SDSIS-SSSSDSLGSSSSSGSRRASASGGA 1212
S S S +S S S SSS+SG+ S SG A
Sbjct: 165 SPSASWTSPSASCASSSASGASTPSDSGWA 194
Score = 47.0 bits (110), Expect = 2e-04
Identities = 59/204 (28%), Positives = 82/204 (40%), Gaps = 35/204 (17%)
Query: 1031 SFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPG-----------SVAGAGP 1079
S ++S + AS S S PSA GA P SG A P+ G S +GA
Sbjct: 82 SGWASPSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGASIPSAFWASPSASGAST 141
Query: 1080 GPTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRP 1139
G+ + +S S G S +A P S A G+ + GW SP
Sbjct: 142 PSDSGWASPSASWASTSSD-SGWASPSASWTSPSASCASSSASGASTPSDS-GWASP--- 196
Query: 1140 KKKHTGMASIDSSAPETTSDSSPT---LSRRPLRGGWA--------PTSWGRGQDSDSIS 1188
S+ +P T+ SSP+ + P GWA P++ G SDS
Sbjct: 197 --------SVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCISPSASGASTSSDSGW 248
Query: 1189 SSSSDSLGSSSSSGSRRASASGGA 1212
+S S S S+S+S + +S SG A
Sbjct: 249 ASPSASWVSTSTSRASTSSDSGWA 272
Score = 40.4 bits (93), Expect = 0.016
Identities = 55/198 (27%), Positives = 73/198 (36%), Gaps = 26/198 (13%)
Query: 1030 SSFYSSSRPTTASQRSPSKHG-GPSAPGALQPLTSGSAGPAQPG---SVAGAGPGPTEGF 1085
S F +S P+ + S S PSA GA SG A P+ S + A G+
Sbjct: 212 SDFGWASTPSDSGWASSSASCISPSASGASTSSDSGWASPSASWVSTSTSRASTSSDSGW 271
Query: 1086 TEKNVPESSPHSP-------CEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGS--- 1135
+ S S S A+ P S ++ + GW S
Sbjct: 272 ASSSASWDSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRASTLSVSGWASFSA 331
Query: 1136 PGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWA-PTSWGRGQDSDSISSSSSDS 1194
G +G S +S TTSDS GWA P++ G SDS +S S S
Sbjct: 332 SGASAPSDSGWTSHSASGVSTTSDS-----------GWASPSASGASTSSDSGWASPSAS 380
Query: 1195 LGSSSSSGSRRASASGGA 1212
S S+SG+ S SG A
Sbjct: 381 WASPSASGASTPSDSGWA 398
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 49.7 bits (117), Expect = 3e-05
Identities = 73/292 (25%), Positives = 103/292 (35%), Gaps = 38/292 (13%)
Query: 1442 GATSCSASGIRAGGEAGR-GMPEG--RGGPGTEPVTVAAAAVTAAA-TVVPVISVGSSLY 1497
G S G + GG A G P G + P T P++V+++ + A T P VG
Sbjct: 226 GVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNL 285
Query: 1498 PG--PGLGHGH-SPGLHPYTALQP--HLPCSPQYLTHPAHPAHPMP-HMPRPAVFPVPSS 1551
P P H +P L P AL+P + SP P A P+P H+P P
Sbjct: 286 PSAPPPANFPHVTPNLPPPPALRPLNNASASP-----PGLGAQPLPGHLPSPHAMGQGMG 340
Query: 1552 AYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVP-------SMAPITVHPYHTEPGLPLP 1604
P G A P+S+ P S +A A P S A + + P P
Sbjct: 341 GLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFP 400
Query: 1605 TSVACELWGQG-------TVSSVHPASTFPAIQGASLPALTTQPSP------LVSGGFP- 1650
S A + +VS+ P T P++ ++ + P P S P
Sbjct: 401 ASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPG 460
Query: 1651 --PPEEETHSQPVNPHSLHHLHAAYRVGMLALEMLGRRAHNDHPNNFSRSPP 1700
PP S P S HH H + + ++ H N PP
Sbjct: 461 PFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPP 512
Score = 38.9 bits (89), Expect = 0.047
Identities = 52/201 (25%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 1048 KHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHSP--------- 1098
+H P+ P ++ + A P +P + G N P +P+ P
Sbjct: 252 QHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLN 311
Query: 1099 -CEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETT 1157
P P P G +PS A+G G G P P+K T S S P ++
Sbjct: 312 NASASPPGLGAQPLP-GHLPSPHAMGQGMG------GLPPGPEKGPTLAPSPHSLPPASS 364
Query: 1158 SDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASASGGARAKTV 1217
S +P P+R + SSSSS S +SSSS S +SAS ++ +
Sbjct: 365 SAPAP-----PMRFPY--------------SSSSSSSAAASSSSSSSSSSASPFPASQAL 405
Query: 1218 EVGRYKGRRPESHAPHVPNQP 1238
Y P + V NQP
Sbjct: 406 P--SYPHSFPPPTSLSVSNQP 424
Score = 36.2 bits (82), Expect = 0.30
Identities = 46/181 (25%), Positives = 67/181 (37%), Gaps = 26/181 (14%)
Query: 1512 PYTALQPHLPCSPQYLTHPAHP-------AHPMPHMPRPAVFPVPSSAY-------PQGV 1557
P + +PH +P P P A P P P ++P + P+G
Sbjct: 179 PEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGG 238
Query: 1558 HPAFL------GAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTS---VA 1608
A G Q+P TP S++++ S P+ P T P P P + V
Sbjct: 239 GAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVT 298
Query: 1609 CELWGQGTVSSVHPASTFPAIQGAS-LPALTTQPSPLVS--GGFPPPEEETHSQPVNPHS 1665
L + ++ AS P GA LP P + GG PP E+ + +PHS
Sbjct: 299 PNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358
Query: 1666 L 1666
L
Sbjct: 359 L 359
Score = 34.7 bits (78), Expect = 0.88
Identities = 60/240 (25%), Positives = 70/240 (29%), Gaps = 73/240 (30%)
Query: 521 SGGLEESRDRPR-------PLPTEPAVRPKEPGTKRKGLGEGVPSSQRGP------RRLS 567
S GL + RP P P P P++P + P+ P R
Sbjct: 148 SSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQ 207
Query: 568 AEGGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGSKRRLSSEDSSLEPDLAEMSLDDSS 627
A G H GG L G G KG GG+ + +
Sbjct: 208 APPGAPPPHPQLYPGGTGGVLSGPPMGPKG---GGAASSVGGPN---------------- 248
Query: 628 LALGAEASTFGGFPESPPPCPLHGGSRGPSTFLPEPPDTYEEDGGVYFSEGPE------- 680
GG PP P+ S G S P P T GG S P
Sbjct: 249 ----------GGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVT 298
Query: 681 ---PP--------TASVGPPGL----LPGDVCTQDDLPSTDESG---NGLPKTKEAAPAV 722
PP AS PPGL LPG LPS G GLP E P +
Sbjct: 299 PNLPPPPALRPLNNASASPPGLGAQPLPG------HLPSPHAMGQGMGGLPPGPEKGPTL 352
Score = 33.1 bits (74), Expect = 2.6
Identities = 45/173 (26%), Positives = 63/173 (36%), Gaps = 20/173 (11%)
Query: 1017 LDRESQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSV-- 1074
+D+++++ P S YS S S GP+ P PL S P P S
Sbjct: 124 IDQDNRSTSP----SIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPS--PQPPDSTPR 177
Query: 1075 ---AGAGPGPTEGFTEKNVPESSPHS-----PCEGLPSEAALTPRPEGKVPSRLALGSRG 1126
A P P+ T + P P S P P L P G V S +G +G
Sbjct: 178 QPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKG 237
Query: 1127 GYNGRGWGSP--GRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTS 1177
G G P G+ T S+ SS + P + P+ GG P++
Sbjct: 238 GGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTT--PVGGGNLPSA 288
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 49.7 bits (117), Expect = 3e-05
Identities = 73/292 (25%), Positives = 103/292 (35%), Gaps = 38/292 (13%)
Query: 1442 GATSCSASGIRAGGEAGR-GMPEG--RGGPGTEPVTVAAAAVTAAA-TVVPVISVGSSLY 1497
G S G + GG A G P G + P T P++V+++ + A T P VG
Sbjct: 226 GVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNL 285
Query: 1498 PG--PGLGHGH-SPGLHPYTALQP--HLPCSPQYLTHPAHPAHPMP-HMPRPAVFPVPSS 1551
P P H +P L P AL+P + SP P A P+P H+P P
Sbjct: 286 PSAPPPANFPHVTPNLPPPPALRPLNNASASP-----PGLGAQPLPGHLPSPHAMGQGMG 340
Query: 1552 AYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVP-------SMAPITVHPYHTEPGLPLP 1604
P G A P+S+ P S +A A P S A + + P P
Sbjct: 341 GLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFP 400
Query: 1605 TSVACELWGQG-------TVSSVHPASTFPAIQGASLPALTTQPSP------LVSGGFP- 1650
S A + +VS+ P T P++ ++ + P P S P
Sbjct: 401 ASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPG 460
Query: 1651 --PPEEETHSQPVNPHSLHHLHAAYRVGMLALEMLGRRAHNDHPNNFSRSPP 1700
PP S P S HH H + + ++ H N PP
Sbjct: 461 PFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPP 512
Score = 38.9 bits (89), Expect = 0.047
Identities = 52/201 (25%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 1048 KHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHSP--------- 1098
+H P+ P ++ + A P +P + G N P +P+ P
Sbjct: 252 QHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLN 311
Query: 1099 -CEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETT 1157
P P P G +PS A+G G G P P+K T S S P ++
Sbjct: 312 NASASPPGLGAQPLP-GHLPSPHAMGQGMG------GLPPGPEKGPTLAPSPHSLPPASS 364
Query: 1158 SDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASASGGARAKTV 1217
S +P P+R + SSSSS S +SSSS S +SAS ++ +
Sbjct: 365 SAPAP-----PMRFPY--------------SSSSSSSAAASSSSSSSSSSASPFPASQAL 405
Query: 1218 EVGRYKGRRPESHAPHVPNQP 1238
Y P + V NQP
Sbjct: 406 P--SYPHSFPPPTSLSVSNQP 424
Score = 36.2 bits (82), Expect = 0.30
Identities = 46/181 (25%), Positives = 67/181 (37%), Gaps = 26/181 (14%)
Query: 1512 PYTALQPHLPCSPQYLTHPAHP-------AHPMPHMPRPAVFPVPSSAY-------PQGV 1557
P + +PH +P P P A P P P ++P + P+G
Sbjct: 179 PEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGG 238
Query: 1558 HPAFL------GAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTS---VA 1608
A G Q+P TP S++++ S P+ P T P P P + V
Sbjct: 239 GAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVT 298
Query: 1609 CELWGQGTVSSVHPASTFPAIQGAS-LPALTTQPSPLVS--GGFPPPEEETHSQPVNPHS 1665
L + ++ AS P GA LP P + GG PP E+ + +PHS
Sbjct: 299 PNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358
Query: 1666 L 1666
L
Sbjct: 359 L 359
Score = 34.7 bits (78), Expect = 0.88
Identities = 60/240 (25%), Positives = 70/240 (29%), Gaps = 73/240 (30%)
Query: 521 SGGLEESRDRPR-------PLPTEPAVRPKEPGTKRKGLGEGVPSSQRGP------RRLS 567
S GL + RP P P P P++P + P+ P R
Sbjct: 148 SSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQ 207
Query: 568 AEGGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGSKRRLSSEDSSLEPDLAEMSLDDSS 627
A G H GG L G G KG GG+ + +
Sbjct: 208 APPGAPPPHPQLYPGGTGGVLSGPPMGPKG---GGAASSVGGPN---------------- 248
Query: 628 LALGAEASTFGGFPESPPPCPLHGGSRGPSTFLPEPPDTYEEDGGVYFSEGPE------- 680
GG PP P+ S G S P P T GG S P
Sbjct: 249 ----------GGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVT 298
Query: 681 ---PP--------TASVGPPGL----LPGDVCTQDDLPSTDESG---NGLPKTKEAAPAV 722
PP AS PPGL LPG LPS G GLP E P +
Sbjct: 299 PNLPPPPALRPLNNASASPPGLGAQPLPG------HLPSPHAMGQGMGGLPPGPEKGPTL 352
Score = 33.1 bits (74), Expect = 2.6
Identities = 45/173 (26%), Positives = 63/173 (36%), Gaps = 20/173 (11%)
Query: 1017 LDRESQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSV-- 1074
+D+++++ P S YS S S GP+ P PL S P P S
Sbjct: 124 IDQDNRSTSP----SIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPS--PQPPDSTPR 177
Query: 1075 ---AGAGPGPTEGFTEKNVPESSPHS-----PCEGLPSEAALTPRPEGKVPSRLALGSRG 1126
A P P+ T + P P S P P L P G V S +G +G
Sbjct: 178 QPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKG 237
Query: 1127 GYNGRGWGSP--GRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTS 1177
G G P G+ T S+ SS + P + P+ GG P++
Sbjct: 238 GGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTT--PVGGGNLPSA 288
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 49.3 bits (116), Expect = 3e-05
Identities = 58/192 (30%), Positives = 79/192 (41%), Gaps = 28/192 (14%)
Query: 1484 ATVVPVISV---GSSLYPGPGLGHGHSPGLH-PYTALQPHLPCSPQYLTHPAHPAHPMPH 1539
AT VPV+ GS P +GH P LH P L PHLP P++ T P H
Sbjct: 802 ATQVPVLEPQLPGSVFDP---IGHFTQPILHLPQPELPPHLPQPPEHSTPP--------H 850
Query: 1540 MPRPAVFPVPS--SAYPQGV-HPAFLGAQYPYSVTPPSLAATAVS----FPVPSMA-PIT 1591
+ + AV P+ +A PQ P+ A P P + A++ P P MA P
Sbjct: 851 LNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQ 910
Query: 1592 VHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPP 1651
V EP P TS+ +L+ Q P P+++ S P P PL P
Sbjct: 911 VLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQP-----PPPLPPPPHPS 965
Query: 1652 PEEETHSQPVNP 1663
+++ QP P
Sbjct: 966 VQQQLQQQPPPP 977
Score = 40.4 bits (93), Expect = 0.016
Identities = 42/151 (27%), Positives = 50/151 (33%), Gaps = 26/151 (17%)
Query: 1458 GRGMPE-GRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTAL 1516
GRG E G PG V A T T P P P HP+ A+
Sbjct: 180 GRGRKETGTAKPGVSTVPNTTQASTPPQTQTP--------QPNPPPVQATP---HPFPAV 228
Query: 1517 QPHLPCSPQYLT----HPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTP 1572
P L +T P P+P P+P P P P HP + A TP
Sbjct: 229 TPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQ---PVQSHPPIIAA------TP 279
Query: 1573 -PSLAATAVSFPVPSMAPITVHPYHTEPGLP 1602
P V + P T+ P H P LP
Sbjct: 280 QPVKTKKGVKRKADTTTPTTIDPIHEPPSLP 310
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 48.5 bits (114), Expect = 6e-05
Identities = 53/205 (25%), Positives = 73/205 (35%), Gaps = 35/205 (17%)
Query: 1512 PYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVT 1571
P T QP P + HP HP P P P P++ + P YP + T
Sbjct: 1259 PTTTPQPFTTMQPTTMPHPTTTPHPTT-TPHPTTTPHPTTTPHPTMTPDPTTTPYP-TTT 1316
Query: 1572 PPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACEL----WGQGTVSSVHPASTF- 1626
P + P PS P+ + LPTS+ EL S+HP TF
Sbjct: 1317 PDPTTTPHPTTPDPSSTPVIT-------TVSLPTSLGTELSSPTLAPTVKPSLHPQLTFT 1369
Query: 1627 ---PAIQGASLPALTTQPS---------------PLVSGGFPPPEEETHSQPVNPHSLHH 1668
P + +P L P+ PL + F PP + S + P H
Sbjct: 1370 APAPHTSTSQIPTLEPSPALESSPSRSSTATSMDPLSTEDFKPPRSQ--SPNLTPPPTHT 1427
Query: 1669 LHAAYRVGMLALEMLGRRAHN-DHP 1692
H+A + + +L AH DHP
Sbjct: 1428 PHSASDLTVSPDPLLSPTAHPLDHP 1452
Score = 31.6 bits (70), Expect = 7.5
Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 9/140 (6%)
Query: 1513 YTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTP 1572
++ + P +PQ T P P P P P++ + P P++
Sbjct: 1211 HSTMIPDPTTTPQPFTTMQPTTTPHSTTPHPTTTPHPTTITHSTMIPDPTTTPQPFTTMQ 1270
Query: 1573 PSLAATAVSFPVPSMAP---ITVHPYHT-EPGL-PLPTSVACELWGQGTVSSVHPASTFP 1627
P+ + P P+ P T HP T P + P PT+ ++ HP + P
Sbjct: 1271 PTTMPHPTTTPHPTTTPHPTTTPHPTTTPHPTMTPDPTTTPYPTTTPDPTTTPHPTTPDP 1330
Query: 1628 AIQGASLPALTTQPSPLVSG 1647
+S P +TT P G
Sbjct: 1331 ----SSTPVITTVSLPTSLG 1346
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 48.5 bits (114), Expect = 6e-05
Identities = 53/194 (27%), Positives = 67/194 (34%), Gaps = 11/194 (5%)
Query: 1468 PGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYL 1527
P T P+T A+ T T P ++ P P +P T + P P S L
Sbjct: 1503 PTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTT----TPSPPTTTPITP--PTSTTTL 1556
Query: 1528 THPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSM 1587
P+ P P PS P + P T PS T + P P+
Sbjct: 1557 PPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTT 1616
Query: 1588 APITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSG 1647
P P T P P PTS L T S +T P P TT PSP ++
Sbjct: 1617 TP---SPPTTTPITP-PTSTTT-LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITT 1671
Query: 1648 GFPPPEEETHSQPV 1661
PP T S P+
Sbjct: 1672 TTTPPPTTTPSSPI 1685
Score = 41.2 bits (95), Expect = 0.009
Identities = 47/194 (24%), Positives = 65/194 (33%), Gaps = 11/194 (5%)
Query: 1462 PEGRGGPGTEPVTVAAAAV---TAAATVVPV---ISVGSSLYPGPGLGHGHSPGLHPYTA 1515
P G P T P+T T T P I+ +++ P P +P P T
Sbjct: 4121 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 4180
Query: 1516 LQPHLPCSPQYLTHPAHPAHPM--PHMPRPAVFPVPSSAYPQ---GVHPAFLGAQYPYSV 1570
P T P H P P P S+ PQ + S
Sbjct: 4181 TTTVTPTPTPTGTQTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLST 4240
Query: 1571 TPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQ 1630
PP++ T+ + P AP T HT P T+ +GT + A T +Q
Sbjct: 4241 LPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQ 4300
Query: 1631 GASLPALTTQPSPL 1644
+ A T P+PL
Sbjct: 4301 TTTTSAWTPTPTPL 4314
Score = 37.0 bits (84), Expect = 0.18
Identities = 42/164 (25%), Positives = 53/164 (32%), Gaps = 12/164 (7%)
Query: 1507 SPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQY 1566
SP T L P SP T P P P P + P P
Sbjct: 1407 SPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPS---PPISTTTT 1463
Query: 1567 PYSVTPPSLAATAVSFPVPSMAP----ITVHPYHTEPGLPLPTSVACELWGQGTVSSVHP 1622
P T PS T S P + +P T P T P P T + + +++ P
Sbjct: 1464 PPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT----PPASTTTLPP 1519
Query: 1623 AST-FPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHS 1665
+T P + P TT PSP + PP T P S
Sbjct: 1520 TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1563
Score = 35.0 bits (79), Expect = 0.68
Identities = 49/184 (26%), Positives = 65/184 (35%), Gaps = 26/184 (14%)
Query: 1468 PGTEPVTVAAAAVTAAATVVP------VISVGSSLYPGPGLGHGHSPGLHPYTALQPHL- 1520
P T P+T + T T P + + P P SP + T P
Sbjct: 1621 PTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTT 1680
Query: 1521 PCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAV 1580
P SP T P+ P M P+ PSS P+ S T PS T +
Sbjct: 1681 PSSPITTT----PSPPTTTMTTPSPTTTPSSPITTTTTPS--------STTTPSPPPTTM 1728
Query: 1581 SFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQ 1640
+ P P+ P P T LP PT+ + L T + + P+ T P S TT
Sbjct: 1729 TTPSPTTTPSP--PTTTMTTLP-PTTTSSPL----TTTPLPPSITPPTFSPFSTTTPTTP 1781
Query: 1641 PSPL 1644
PL
Sbjct: 1782 CVPL 1785
Score = 33.9 bits (76), Expect = 1.5
Identities = 50/204 (24%), Positives = 66/204 (32%), Gaps = 21/204 (10%)
Query: 1462 PEGRGGPGTEPVTVAAAAV---TAAATVVPV---ISVGSSLYPGPGLGHGHSPGLHPYTA 1515
P G P T P+T T T P I+ +++ P P +P P T
Sbjct: 4029 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 4088
Query: 1516 LQPHLPC-SPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVH-PAFLGAQYPYSVTP- 1572
P +P P P V P P+ P G P +VTP
Sbjct: 4089 TTTVTPTPTPTGTQTPT----TTPITTTTTVTPTPT---PTGTQTPTTTPITTTTTVTPT 4141
Query: 1573 PSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGA 1632
P+ T P TV P T G PT+ T ++V P T Q
Sbjct: 4142 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT-----TTTTVTPTPTPTGTQTG 4196
Query: 1633 SLPALTTQPSPLVSGGFPPPEEET 1656
+T P ++ PPPE T
Sbjct: 4197 PPTHTSTAPIAELTTSNPPPESST 4220
Score = 33.5 bits (75), Expect = 2.0
Identities = 49/218 (22%), Positives = 65/218 (29%), Gaps = 29/218 (13%)
Query: 1468 PGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYL 1527
P T P T T P + ++ P P +P T P SP
Sbjct: 1434 PTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTT----TPSPPTTTPSPPTTTPSPPTT 1489
Query: 1528 THPAHP--AHPMPHMPRPAVFPVPSSAYPQGVHPA-------------FLGAQYPYSVTP 1572
T P P P P P ++ P P+ +TP
Sbjct: 1490 TTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP 1549
Query: 1573 PSLAATAVSFPVPSMAPITVH--PYHTEPGLPLPTSVACELWGQGTVSSVHPASTF---P 1627
P+ T PS P T P T P P T+ + T+++ P T P
Sbjct: 1550 PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPS-----PPTITTTTPPPTTTPSP 1604
Query: 1628 AIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHS 1665
+ P TT PSP + PP T P S
Sbjct: 1605 PTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1642
Score = 31.6 bits (70), Expect = 7.5
Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 13/96 (13%)
Query: 1570 VTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAI 1629
+T PS T P P T P T P P T T + + P I
Sbjct: 1396 ITTPSPPTTT---PSPPPTSTTTLPPTTTPSPPTTT----------TTTPPPTTTPSPPI 1442
Query: 1630 QGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHS 1665
+ P TT PSP +S PP T S P S
Sbjct: 1443 TTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPS 1478
Score = 31.2 bits (69), Expect = 9.7
Identities = 30/128 (23%), Positives = 44/128 (34%), Gaps = 26/128 (20%)
Query: 1536 PMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATA---VSFPVPSMAPITV 1592
P P P+ P ++ P P+ PP+ T + P P + T
Sbjct: 1399 PSPPTTTPSPPPTSTTTLPPTTTPS-----------PPTTTTTTPPPTTTPSPPITTTTT 1447
Query: 1593 HPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPP 1652
P T P P+ T+ + P +T P+ + TT PSP + PP
Sbjct: 1448 PPPTTTPSPPISTT------------TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPP 1495
Query: 1653 EEETHSQP 1660
T S P
Sbjct: 1496 PTTTPSPP 1503
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 48.5 bits (114), Expect = 6e-05
Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 1432 TAGGSSTAREGATSCSASGIRAGGEAGRGMP--EGRGGPGTEPV---TVAAAAVTAAATV 1486
+ GG SC A+G GG + G P G GGPG EP AAAA AAA
Sbjct: 194 STGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAA 253
Query: 1487 VPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHL 1520
+ L G G G +PG P T++ L
Sbjct: 254 AAAAAAAGGLAAAGGPGQGWAPGPGPITSIPDSL 287
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 48.5 bits (114), Expect = 6e-05
Identities = 59/176 (33%), Positives = 66/176 (37%), Gaps = 30/176 (17%)
Query: 1498 PGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPA-HPAHPMPHMPRPAVFPVPSSAYP-- 1554
PGP +PG+HP A H P S + P HP P H P P V P S +P
Sbjct: 275 PGPPQLPPPAPGVHP-PAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPA 333
Query: 1555 QGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQ 1614
GVHP G V PP A V P P VHP PG+ P S
Sbjct: 334 PGVHPPAPG------VHPP---APGVHPPAPG-----VHP--PAPGVHPPPSAGVHPQAP 377
Query: 1615 GTVSSVHPA--STFPAIQGASLPALTTQP-SPLV---SGGFPPPEEETHSQPVNPH 1664
G VHPA + P G PA P +P V G P H QP H
Sbjct: 378 G----VHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVH 429
Score = 42.7 bits (99), Expect = 0.003
Identities = 37/107 (34%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 1496 LYPGPGLG-HGHSPGLHPYT-ALQPHLPC--SPQYLTHPAHPA-HPMP---HMPRPAVFP 1547
++P P G H +PG+HP A+ P P P HP P HP P H P V P
Sbjct: 364 VHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP 423
Query: 1548 VPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHP 1594
P GVHP+ G +P + PP L P+PS P + P
Sbjct: 424 -----QPPGVHPSNPGV-HPPTPMPPMLRP-----PLPSEGPGNIPP 459
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 48.1 bits (113), Expect = 8e-05
Identities = 68/256 (26%), Positives = 88/256 (34%), Gaps = 38/256 (14%)
Query: 1434 GGSSTAREGATSCSASGIRAGGEAG----RGMPEGRGGP------------GTEPVTVAA 1477
GG R G S + AG R PEG G G EP
Sbjct: 98 GGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGP 157
Query: 1478 AAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPM 1537
A A + G PGPG G G P A + + H A PA +
Sbjct: 158 AKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSL 217
Query: 1538 PHMPRPAVFPVPSSAYPQGV--HPAFLGAQYPYSVTPPS------LAATAVSFPVPSMAP 1589
+ A+ P+P A P V P F+GA P + PS AA A + P P AP
Sbjct: 218 VNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAP 277
Query: 1590 ITV-----HPYHTEPGLP-LPTSVACELWGQ-GTVSSVHPASTFPAIQGASLPALTTQPS 1642
T+ HP P +P A + G G + PA+ PA ++ QP
Sbjct: 278 ATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPA-------GVSGQPG 330
Query: 1643 PLVSGGFPPPEEETHS 1658
P + P P + S
Sbjct: 331 PGAAAAAPAPGVKAES 346
Score = 39.3 bits (90), Expect = 0.036
Identities = 69/246 (28%), Positives = 92/246 (37%), Gaps = 35/246 (14%)
Query: 1447 SASGIRAGGEAGRGMPEGRG-------GPGTEPVTVAAAAVT----AAATVVPVISVG-S 1494
+A RAG G G G G GPG +AA+ AAA V +++ G +
Sbjct: 164 AALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPA 223
Query: 1495 SLYPGPGLGHGHSPGLHPYT-----ALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVP 1549
+L P P +PG T A P P +P + PA PA P P P P
Sbjct: 224 ALLPLPKPA---APGTVIQTPPFVGAAAPPAPAAP---SPPAAPAPAAPAAAPPPPPPAP 277
Query: 1550 SS-AYPQGVHPAFLGAQYPYSVTPPSLAATAVSF-PVPSMAPITVHPYHTEPGLPLPTSV 1607
++ A P G HPA P +V PP+ A S P+ AP P G P P +
Sbjct: 278 ATLARPPG-HPAGPPTAAP-AVPPPAAAQNGGSAGAAPAPAPAAGGPAGVS-GQPGPGAA 334
Query: 1608 AC-------ELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQP 1660
A + V + PA+ A G + A + P + G P P P
Sbjct: 335 AAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAP 394
Query: 1661 VNPHSL 1666
P L
Sbjct: 395 GTPTGL 400
Score = 35.4 bits (80), Expect = 0.52
Identities = 61/292 (20%), Positives = 99/292 (33%), Gaps = 59/292 (20%)
Query: 1037 RPTTASQRSPSKHGGPSAPGA-LQPLTSGSAG------------------------PAQP 1071
RP S R P GP+ P A L+P GSAG PA P
Sbjct: 104 RPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGP 163
Query: 1072 GSVA---GAGPGPTEGFTEKNVPE------------------SSPHSPCEGLP----SEA 1106
++A G GPGP G P +S H+ + A
Sbjct: 164 AALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPA 223
Query: 1107 ALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETTSDSSPTLSR 1166
AL P P+ P + + + +P P + ++AP + TL+R
Sbjct: 224 ALLPLPKPAAPGTV-IQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLAR 282
Query: 1167 RPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASASGGARAKTVEVGRYKGRR 1226
P PT+ + ++ ++ G S+ + A A+GG + + G G
Sbjct: 283 PPGHPAGPPTA------APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG--PGAA 334
Query: 1227 PESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGP 1278
+ AP V + + A+T+ +++ S+ P+ G P
Sbjct: 335 AAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSP 386
Score = 35.4 bits (80), Expect = 0.52
Identities = 58/233 (24%), Positives = 75/233 (32%), Gaps = 34/233 (14%)
Query: 1460 GMPEG--RGGPGTEPVTVAAAAVTAAATVVPVISVGS----SLYPGPGLGHGH-SPGLH- 1511
G P G P P A +A A P + G S PGPG +PG+
Sbjct: 285 GHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKA 344
Query: 1512 --PYTALQPHLPCSPQYLTH-PAHPAHPM---PHM----PRPAVFPVPSSAYPQGVHPAF 1561
P +Q P + PA A M P M P PA P P+ P G+
Sbjct: 345 ESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGA 404
Query: 1562 LGA-QYPYSVTPPSLAA----------TAVSFPVPSMAPITVHPYHTEPGLPLPTSVACE 1610
GA S TP + + A P P P + + PG+ L S +
Sbjct: 405 AGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQ 464
Query: 1611 LWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNP 1663
L + A Q + P T P P PP + T P P
Sbjct: 465 L-----LMIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQISTVQAPGTP 512
Score = 32.3 bits (72), Expect = 4.4
Identities = 65/269 (24%), Positives = 83/269 (30%), Gaps = 74/269 (27%)
Query: 513 PSRPGASRSGGLEESRDRP----RPL----PTEPAVRPKEPGTKRKGLGEGVPSS----- 559
P G +R GG R P RPL P PA + + P G VP++
Sbjct: 89 PPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAA 148
Query: 560 --QRGPRRLSAEGGDKALH-KMGPGGGKAKALG-GAGSGSKGSAGG-----GSKRRLSSE 610
+ P + G AL + GPG G G G G G G GS L+S
Sbjct: 149 GPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSH 208
Query: 611 DSS----------------LEPDLAEMSLDDSSLALGAEA---------------STFGG 639
++ L A ++ + +GA A +
Sbjct: 209 HAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAA 268
Query: 640 FPESPPPCPLH-----GGSRGPSTFLPEPPDTYEEDGGVYFSEGPEPPTASVGPPGLLPG 694
P PPP P G GP T P P G P P A+ GP G+
Sbjct: 269 APPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGV--- 325
Query: 695 DVCTQDDLPSTDESGNGLPKTKEAAPAVG 723
SG P AAPA G
Sbjct: 326 -------------SGQPGPGAAAAAPAPG 341
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 48.1 bits (113), Expect = 8e-05
Identities = 56/218 (25%), Positives = 87/218 (39%), Gaps = 32/218 (14%)
Query: 1017 LDRESQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAG 1076
LD E ++ + + S +P +Q P QP+ S P+QP ++
Sbjct: 452 LDMEKESEEKEEKES---EPQPEPVAQPQPQSQPQLQLQSQSQPVLQ-SQPPSQPEDLSL 507
Query: 1077 AGPGPTEGFTEKN---VPESSPHSPCEGL-----PSEAALTPRPEGKVPSRLALGSRGGY 1128
A PT T++ +PE P E + P E LT PE K ++ SRG
Sbjct: 508 AVLQPTPQVTQEQGHLLPERKDF-PVESVKLTEVPVEPVLTVHPESKSKTKTRSRSRGRA 566
Query: 1129 NGRGWGSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSIS 1188
+ S R + +S SS+ ++S S + SR S S
Sbjct: 567 RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSR-------------------SSS 607
Query: 1189 SSSSDSLGSSSSSGSRRASASGGARAKTVEVGRYKGRR 1226
SSSS + GSSS S S+S +R+++ G + R+
Sbjct: 608 SSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRK 645
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 48.1 bits (113), Expect = 8e-05
Identities = 57/189 (30%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 1468 PGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYL 1527
P V ++ A + +VPV V +S+ P P SP L P AL P P P +
Sbjct: 218 PDAFQVPLSVPAPVPHSGLVPV-QVATSV-PAP------SPPLAPVPALAPAPPSVPTLI 269
Query: 1528 THPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSM 1587
+ ++P+ + + PVP+SA P G P A P SV + + PVP
Sbjct: 270 SD----SNPLS-VSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPS 324
Query: 1588 APITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSG 1647
AP V P+PT V + PAST PA A P P+P S
Sbjct: 325 APTLVL-------APVPTPVLAPM----------PASTPPA---APAPPSVPMPTPTPSS 364
Query: 1648 GFPPPEEET 1656
G PP T
Sbjct: 365 G--PPSTPT 371
Score = 37.7 bits (86), Expect = 0.10
Identities = 50/184 (27%), Positives = 72/184 (39%), Gaps = 19/184 (10%)
Query: 1482 AAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMP 1541
+A+ +VPV + P P +P P +A L +P P+ P + +P
Sbjct: 278 SASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAP---VPPSAPTLVLAPVP 334
Query: 1542 RPAVFPVPSSAYPQGVHPAFLGAQYPY-SVTPPSLAATAVSF-PVPSMAPITVHPYHTEP 1599
P + P+P+S P P + P S PPS +F P P AP T P T
Sbjct: 335 TPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAP-TPAPIFTPA 393
Query: 1600 GLPLPTSVACELWGQGTVSS-------VHPASTFPAIQGASL---PALTTQPS-PLVSGG 1648
P+P + + + + PA+ PA+Q L P PS PLV
Sbjct: 394 PTPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPLVY-- 451
Query: 1649 FPPP 1652
PPP
Sbjct: 452 IPPP 455
Score = 35.0 bits (79), Expect = 0.68
Identities = 36/119 (30%), Positives = 48/119 (40%), Gaps = 10/119 (8%)
Query: 1540 MPRPAVFPVPSSA-YPQGVHPAF-----LGAQYPYSVTPPSLAATAVSFPVPSMAPITVH 1593
+P P P P SA P V AF + A P+S P AT+V P P +AP+
Sbjct: 199 LPAPICPPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQVATSVPAPSPPLAPVPAL 258
Query: 1594 PYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPP 1652
P +P S + L +V PAS P+ +P P+PL PP
Sbjct: 259 A-PAPPSVPTLISDSNPLSVSASVLVPVPASAPPS---GPVPLSAPAPAPLSVPVSAPP 313
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 47.8 bits (112), Expect = 1e-04
Identities = 60/193 (31%), Positives = 76/193 (39%), Gaps = 24/193 (12%)
Query: 1061 LTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHSPCEGLPSEAA---------LTPR 1111
L+ G A P P A P +E+ P + +P L EA+ P
Sbjct: 1335 LSLGPAAPPPPCIAASREPLDHRTSSEQADPSAPCLAPSSLLSPEASPCRNDMNTRTPPE 1394
Query: 1112 PEGKVPS--------RLALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETTSDSSPT 1163
P K S R A S G+ GR G R + S SS+ ++S SS +
Sbjct: 1395 PSAKQRSMRCYRKACRSASPSSQGWQGRR-GRNSRSVSSGSNRTSEASSSSSSSSSSSRS 1453
Query: 1164 LSRR--PLRGGWAPTSW---GRGQD-SDSISSSSSDSLGSSSSSGSRRASASGGARAKTV 1217
SR P W +S GR + S S SSSSS S SSSSS SR S S R ++
Sbjct: 1454 RSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSD 1513
Query: 1218 EVGRYKGRRPESH 1230
RY R H
Sbjct: 1514 RRRRYSSYRSHDH 1526
Score = 40.4 bits (93), Expect = 0.016
Identities = 62/231 (26%), Positives = 79/231 (34%), Gaps = 59/231 (25%)
Query: 1480 VTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCS-----PQYLTHPAHPA 1534
V + + VP S+ P P G G P L P P LP S P TH A
Sbjct: 862 VQSVSPAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQPPSLPLSMGPVLPDPFTHYA--- 918
Query: 1535 HPMPHMP-RPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVH 1593
P+P P P V P S YP P T P ++ T ++ VP P
Sbjct: 919 -PLPSWPCYPHVSP---SGYP----------CLPPPPTVPLVSGTPGAYAVP---PTCSV 961
Query: 1594 PYHTEPGLPLPTSVACEL----WGQGTV-----SSVHPASTFPAIQGASLP--------- 1635
P+ P P S C WG G S+V P PA G ++P
Sbjct: 962 PWAPPPAPVSPYSSTCTYGPLGWGPGPQHAPFWSTVPPPPLPPASIGRAVPQPKMESRGT 1021
Query: 1636 -------ALTTQPSPLVSGGFP--------PPEEETHSQPVNPHSLHHLHA 1671
L +P +S G P P + E P +PH H + A
Sbjct: 1022 PAGPPENVLPLSMAPPLSLGLPGHGAPQTEPTKVEVKPVPASPHPKHKVSA 1072
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 47.8 bits (112), Expect = 1e-04
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 20/126 (15%)
Query: 1006 QAKLKKILDKLLDRESQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGS 1065
+AK+ K + THKP ++ SS PT S RS P + P TSG+
Sbjct: 461 EAKITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRS------TRPPATMVPPTSGT 514
Query: 1066 AGPAQPGSVAGAGPGPT-------EGFTEKNVPESSPHSPCEGLPSEAA-------LTPR 1111
+ P +V G PT ++K P+SSP P P +AA LT R
Sbjct: 515 STPRTAPAVPTPGSAPTGSKKPIGSEASKKAGPKSSPRKPVPLRPGKAARDVPLSDLTTR 574
Query: 1112 PEGKVP 1117
P + P
Sbjct: 575 PSPRQP 580
Score = 39.3 bits (90), Expect = 0.036
Identities = 59/250 (23%), Positives = 74/250 (29%), Gaps = 24/250 (9%)
Query: 1428 LYEQTAGGSSTAREGATSCSASGIRAGGEAGRGMPEGRGGPGTEPVTVAAAAVTAAATVV 1487
L+ Q +G T + + A +P GRG GT VA A T
Sbjct: 249 LFSQDSGRPFTFQSDLALLGLENLTTATPALGSLPAGRGPRGT----VAPATPTKPQRTS 304
Query: 1488 PVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPR----- 1542
P GP L AL P LP S T PA P
Sbjct: 305 PTNPHQHMAVGGPAQTPLLPAKLSASNALDPMLPASVGGSTRTPRPAAAQPSQKITATKI 364
Query: 1543 PAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPY------- 1595
P P SA + P + + +P T PS + T + P P T P
Sbjct: 365 PKSLPTKPSAPSTSIVP--IKSPHPTQKTAPS-SFTKSALPTQKQVPPTSRPVPARVSRP 421
Query: 1596 -----HTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFP 1650
PG+P P + T SS P T + + S S P
Sbjct: 422 AEKPIQRNPGMPRPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASARTSTHKP 481
Query: 1651 PPEEETHSQP 1660
PP S P
Sbjct: 482 PPFTALSSSP 491
Score = 36.6 bits (83), Expect = 0.23
Identities = 57/209 (27%), Positives = 69/209 (33%), Gaps = 46/209 (22%)
Query: 512 LPSRPGASRSGGLEESRDRPRPLPTEPAVRPKEPGTKRKGLGEGVPSSQRGPRRLSAEGG 571
LP R G + G E D P P PA + PG G+P +Q GP E G
Sbjct: 1446 LPGRDGQAGQQG--EQGDDGDPGPMGPAGKRGNPGVA------GLPGAQ-GPPGFKGESG 1496
Query: 572 DKALHKMGPGG-----GKAKALGGAGS-GSKGSAGGGSKRRLSSEDSSLEPDLAEMSLDD 625
++GP G G+ G G GSKG G D EM
Sbjct: 1497 LPG--QLGPPGKRGTEGRTGLPGNQGEPGSKGQPG----------------DSGEMGFPG 1538
Query: 626 SSLALGAEAST----FGGF--PESPPPCPLHGGSRGPSTFL-------PEPPDTYEEDGG 672
+ G + F G P PP G GP L P+ D G
Sbjct: 1539 MAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWG 1598
Query: 673 VYFSEGPEPPTASVGPPGLLPGDVCTQDD 701
+ GP P GPPG G + Q D
Sbjct: 1599 LQGPRGPPGPRGRPGPPGPPGGPIQLQQD 1627
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 47.4 bits (111), Expect = 1e-04
Identities = 62/281 (22%), Positives = 112/281 (39%), Gaps = 26/281 (9%)
Query: 1026 PQTLSSFYSSSRP---TTA--SQRSPSKHGGPSAPG-ALQPLTSGSAGPAQPGSVAGAGP 1079
P T +S +++ P TTA S++S + + P +P L P + S+G ++ + + + P
Sbjct: 177 PITSASMETTALPGSTTTAGLSEKSTTFYSSPRSPDRTLSPARTTSSGVSEKSTTSHSRP 236
Query: 1080 GPT------EGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGW 1133
GPT + T V + S S +P T P PS L S ++ G+
Sbjct: 237 GPTHTIAFPDSTTMPGVSQESTAS--HSIPGSTDTTLSPGTTTPSSLGPESTTFHSSPGY 294
Query: 1134 GSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRG---GWAPT---SWGRGQDSDSI 1187
R T +++S P +S SP + P PT SW +D+
Sbjct: 295 TKTTRLPDNTTTSGLLEASTPVHSSTGSPHTTLSPASSTTHEGEPTTFQSWPSSKDTSPA 354
Query: 1188 SSSSSDSLGSSSSS--GSRRASASGGARAKTVEVGRYKGRRPESHAP---HVPNQPSEAA 1242
S ++ + S++ S ++ + A + +G + P +P P+ +A
Sbjct: 355 PSGTTSAFVKLSTTYHSSPSSTPTTHFSASSTTLGHSEESTPVHSSPVATATTPPPARSA 414
Query: 1243 AHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLH 1283
+ E T ++ G++ T F S++ GH H
Sbjct: 415 TSGHVE-ESTAYHRSPGSTQTMHFPESSTTSGHSEESATFH 454
Score = 40.4 bits (93), Expect = 0.016
Identities = 74/303 (24%), Positives = 110/303 (36%), Gaps = 57/303 (18%)
Query: 1023 THKPQTLSSFYSSSRPTTASQRSPSKH-----GGPSAPGALQPLTSGSAGPA------QP 1071
TH P +++S S TT+ R S H G + PG Q T+ + P P
Sbjct: 570 THLPASMTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSP 629
Query: 1072 GSVAGAGPGPTEGFTEKNVPESS-----PHSPCEGLPSEAALTPRPEGKVPSRLALGSRG 1126
GS + GP E T + P S+ P + EA++ + P L G
Sbjct: 630 GSTTASSLGP-EYTTFHSRPGSTETTLLPDNTTASGLLEASMPVHSSTRSP-HTTLSPAG 687
Query: 1127 GYNGRG-------WGSPG--RPKKKHTGMASIDSSAPETTSDSSPT------LSRRPLRG 1171
+G W S RP T A ++ P TTS SP+ +S R
Sbjct: 688 STTRQGESTTFHSWPSSNDTRPAPPTTTSAFVE---PSTTSHGSPSSIPTTHISARSTTS 744
Query: 1172 GWAP------TSWGRGQ-----DSDSISSSSSDSLGSSSSSGSRRASASGGARAKTVEVG 1220
G +S G Q +SD+ S +S S SS+ +SA A E
Sbjct: 745 GLVEESTTYHSSPGSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPT 804
Query: 1221 RYKGRRPESHAPHVPNQPSEA-------AAHFYFELAKTVLIKAGGNSSTSI---FTHPS 1270
Y + H P+ + + A+H + T+++ A +S + T P
Sbjct: 805 SYHSSPGSTATTHFPDSSTTSGRSEESIASHSSQDATGTIVLPARSTNSVLLGESTTSPI 864
Query: 1271 SSG 1273
SSG
Sbjct: 865 SSG 867
Score = 33.1 bits (74), Expect = 2.6
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 42/292 (14%)
Query: 1019 RESQTHKPQTLSSFYSSSRPTTASQRSPSKHGGP-SAPGALQPLTSGSAGPAQPGSVAGA 1077
R TH ++F S+ SQ S + H P S L P ++ ++ + +
Sbjct: 1032 RPGSTHT----TAFPGSTTMPGVSQESTASHSSPGSTDTTLSPRSTTASSLGPESTTFHS 1087
Query: 1078 GPGPTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPG 1137
GPG TE +P+++ S GL A TP R L G +G +
Sbjct: 1088 GPGSTE---TTLLPDNTTAS---GLLE--ASTPVHSSTGSPRTTLSPAGSTTRQGESTTF 1139
Query: 1138 R--PKKKHTGMASIDSSAP----ETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSS- 1190
+ P K T A +++ TTS SP+ S + T++GR ++S ++ SS
Sbjct: 1140 QSWPSSKDTMPAPPTTTSAFVELSTTSHGSPS-SIPTTHFSASSTTFGRSEESTTVHSSP 1198
Query: 1191 ----SSDSLGSSSSSG---SRRASASGGARAKTV---EVGRYKGRRPESHAPH------V 1234
++ S S++SG A S +T+ E GR ES H +
Sbjct: 1199 VAPATTPSPARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTI 1258
Query: 1235 PNQPSEAAA-----HFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRN 1281
+ PS +A Y ++ SST+ S+ H P N
Sbjct: 1259 SSPPSTTSALVEEPTSYHSSPGSIATTHFPESSTTSGRSEESTASHSSPDTN 1310
Score = 31.2 bits (69), Expect = 9.7
Identities = 71/286 (24%), Positives = 101/286 (35%), Gaps = 43/286 (15%)
Query: 1430 EQTAGGSSTAREGATSCSA-SGIRAGGEAGRGMPEGRGGPGTEPVTVAAAAVTAAA--TV 1486
+ T +ST G + S S R G P PG + A+ + + T+
Sbjct: 1009 DTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTL 1068
Query: 1487 VPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVF 1546
P + SSL P H PG T L + S L + P H PR +
Sbjct: 1069 SPRSTTASSLGPESTTFHS-GPGSTETTLLPDNTTASG--LLEASTPVHSSTGSPRTTLS 1125
Query: 1547 PVPSSAYPQGVHPAFLGAQYPYSV----TPPSLAATAVSFPVPSMAPITVHPYHTEPGLP 1602
P S+ QG F +P S PP+ + V S H P
Sbjct: 1126 PAGSTTR-QGESTTF--QSWPSSKDTMPAPPTTTSAFVELSTTS---------HGSPS-S 1172
Query: 1603 LPT---SVACELWGQGTVSS-VHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEET-- 1656
+PT S + +G+ S+ VH + PA T PSP S EE T
Sbjct: 1173 IPTTHFSASSTTFGRSEESTTVHSSPVAPA----------TTPSPARSTTSGLVEESTAY 1222
Query: 1657 HSQPVNPHSLHHLHAAYRVGMLALEMLGRRAHNDHPNNFSRSPPYT 1702
HS P + ++H ++ G R +H+ + S SPP T
Sbjct: 1223 HSSPGSTQTMHFPESSTASGR---SEESRTSHSSTTHTIS-SPPST 1264
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.4 bits (111), Expect = 1e-04
Identities = 64/226 (28%), Positives = 82/226 (36%), Gaps = 29/226 (12%)
Query: 1436 SSTAREGATSCSASGIRAGGEAGRGMPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSS 1495
SS+ ++ + + GI A P +G P T P + AT P +
Sbjct: 915 SSSPKKARATPAPKGIPAS-------PSPKGAP-TPPAATPPSPKGGPATPSPKWA---- 962
Query: 1496 LYPGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAH---PAHPMPH-MPRPAVFPVPSS 1551
P P SP P T P +P T P+ PA P P P P PS
Sbjct: 963 --PTPPAATPPSPKGGPATPSPKGAP-TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSP 1019
Query: 1552 AYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACEL 1611
P GA P + TPPS + + P+P AP T P T P P L
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTT--PAATLPS-PKGGPATPSL 1076
Query: 1612 WGQGTVSSVHPAS-----TFPAIQGASLPALTTQPSPLVSGGFPPP 1652
G T + P S P+ +GA +P T PSP GG P
Sbjct: 1077 KGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSP--KGGLATP 1120
Score = 44.3 bits (103), Expect = 0.001
Identities = 77/295 (26%), Positives = 100/295 (33%), Gaps = 67/295 (22%)
Query: 1434 GGSST--AREGATSCSASGIRAGGEA--------GRGMPEGRGGPGTE------------ 1471
GG +T ++EG T +A+ GG A G +P +G P +
Sbjct: 1358 GGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPA 1417
Query: 1472 -PVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHS----------PGLHPYTALQPHL 1520
PVT AA + + P SL P P L T P
Sbjct: 1418 TPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKE 1477
Query: 1521 PCSPQYLTH-------PAHPAHPMPHMPRPAVFP-----------------VPSSAYPQG 1556
P +P+ + PA PA PM PAV P P++
Sbjct: 1478 PPAPKQVATSSSPKKAPATPA-PMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSK 1536
Query: 1557 VHPAFLG---AQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWG 1613
PA L A P ++T PS T + P P AP T P E P P G
Sbjct: 1537 KTPATLAPKEALIPPAMTVPSPKKTP-AIPTPKEAPAT--PSSKEASSP-PAVTPSTYKG 1592
Query: 1614 QGTVSS--VHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSL 1666
+ + PA T P+ + A P T PSP P P+ S PV P SL
Sbjct: 1593 APSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSL 1647
Score = 40.8 bits (94), Expect = 0.012
Identities = 59/250 (23%), Positives = 75/250 (30%), Gaps = 40/250 (16%)
Query: 1434 GGSSTAREGATSCSASGIRAGGEAGRGMPEGRGGPGTE---PVTVAAAAVTAAATVVPVI 1490
GG +T + + + G P +G P T P + T + P
Sbjct: 1138 GGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1197
Query: 1491 SVGSSLYPGPGLGHGHSPGLHPYTALQPHLP----CSPQYLTHPAHPAHPMPH------M 1540
+ P GL G A P P +P P PA P
Sbjct: 1198 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPAT 1257
Query: 1541 PRPAVFPVPSSAYPQGVH-----PAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPY 1595
P P P P +A P + P GA P VTPPS P P T P
Sbjct: 1258 PPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPS----------PKGGPATSPP- 1306
Query: 1596 HTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEE 1655
G P P + T S + P +GA P T PSP + P
Sbjct: 1307 ---KGAPTPPAA--------TPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPS 1355
Query: 1656 THSQPVNPHS 1665
+ P P S
Sbjct: 1356 SKGGPTTPSS 1365
Score = 40.0 bits (92), Expect = 0.021
Identities = 60/241 (24%), Positives = 76/241 (31%), Gaps = 22/241 (9%)
Query: 1434 GGSSTAREGATSCSASGIRAGGEAGRGMPEGRGGPGTE---PVTVAAAAVTAAATVVPVI 1490
GG +T + + + G P +G P T P + T P
Sbjct: 1115 GGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTT 1174
Query: 1491 SVGSSLYPGPGLGHGHSPGLHPYTALQPHLP----CSPQYLTHPAHPAHPMPHMPRPAVF 1546
+ P GL G A P P +P P PA P
Sbjct: 1175 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1234
Query: 1547 PVPSSA--YPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLP 1604
P P A P P+ G + PP A T + PS+ P H G P P
Sbjct: 1235 PSPKGAPTTPAATPPSPKGGP---ATPPPKGAPTPPAATPPSLKGGLATPPHK--GAPNP 1289
Query: 1605 TSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPH 1664
V G PA++ P +GA P T PSP S G PPP+ V P
Sbjct: 1290 AVVTPPSPKGG------PATSPP--KGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPP 1341
Query: 1665 S 1665
S
Sbjct: 1342 S 1342
Score = 39.3 bits (90), Expect = 0.036
Identities = 57/219 (26%), Positives = 72/219 (32%), Gaps = 21/219 (9%)
Query: 1461 MPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYT-----A 1515
+P +GGP T ++ A AAT P G P P G P P + A
Sbjct: 1064 LPSPKGGPATP--SLKGAPTPPAAT--PPSPKGGPATPSPK-GAPMPPAATPPSPKGGLA 1118
Query: 1516 LQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQG----VHPAFLGAQYPYSVT 1571
PH P P + P P++ P P GA + T
Sbjct: 1119 TPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAAT 1178
Query: 1572 PPSLAATAVSFPVPSMAPITVHPYHTEP----GLPLPTSVACELWGQGTVSSVHPASTFP 1627
PPS ++ P P AP T P T P GL P+ T S P
Sbjct: 1179 PPSPKG-GLATPSPKGAPTT--PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1235
Query: 1628 AIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSL 1666
+ +GA T PSP PPP+ P SL
Sbjct: 1236 SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSL 1274
Score = 37.7 bits (86), Expect = 0.10
Identities = 60/230 (26%), Positives = 75/230 (32%), Gaps = 26/230 (11%)
Query: 493 PGVTYSGTDRKLALCWARALPSRPGA---SRSGGLEESRDRPRPLPTEPAVRPKEPGTKR 549
P T LA + P+ P A S GGL + P+ PT PA P P
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL--ATPSPKGAPTTPAATPPSP---- 1205
Query: 550 KGLGEGVPSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGSKRRLSS 609
KG G PS + P +A P GG A + + K ++
Sbjct: 1206 KG-GLATPSPKGAPTTPAAT-------PPSPKGGLATPSPKGAPTTPAATPPSPKGGPAT 1257
Query: 610 EDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESP---PPCPLHGGSRGPSTFLPEPPD- 665
P + SL G G P PP P G + P P PP
Sbjct: 1258 PPPKGAP--TPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAA 1315
Query: 666 TYEEDGGVYFSEGPEPPTASVGPPGLLPGDVCTQDDLPSTDESGNGLPKT 715
T G S G PP + PP + P LP+T S G P T
Sbjct: 1316 TPPSPKG---SPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTT 1362
Score = 35.4 bits (80), Expect = 0.52
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 1038 PTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHS 1097
PT + PS GGP+ P T + P P A P P T P ++P S
Sbjct: 986 PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP---PAATPPS 1042
Query: 1098 PCEGLPSEAALTPRPEG--KVPSRLALGSRGG 1127
P +G P A TP P+G P+ +GG
Sbjct: 1043 P-KGSP---AATPLPKGAPTTPAATLPSPKGG 1070
Score = 35.0 bits (79), Expect = 0.68
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 1038 PTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQP-GSVAGAGP--GPTEGFTEKNVPESS 1094
PT + PS GGP+ P T +A P P G A P PT P+
Sbjct: 940 PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGG 999
Query: 1095 PHSPC-EGLPSEAALT-PRPEG 1114
P +P +G P+ A+T P P+G
Sbjct: 1000 PATPSPKGAPTPPAVTPPSPKG 1021
Score = 35.0 bits (79), Expect = 0.68
Identities = 50/198 (25%), Positives = 66/198 (33%), Gaps = 34/198 (17%)
Query: 1038 PTTASQRSPSKHGGPSAP---GALQPLT----SGSAGPAQPG------SVAGAGPGPTEG 1084
PTT + PS GGP+ P GA P S GPA P A P P G
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGG 1116
Query: 1085 FT------EKNVPESSPHSPCEGLPSEAALTPRPEG--KVPSRLALGSRGGY-----NGR 1131
P ++P SP GL TP P+G P+ +GG G
Sbjct: 1117 LATPPHKGAPTTPAATPPSPKGGL-----ATPPPKGAPTTPAATPPSPKGGLATPPPKGA 1171
Query: 1132 GWGSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSS 1191
P G+A+ TT ++P P G P+ G + S
Sbjct: 1172 PTTPAATPPSPKGGLATPSPKGAPTTPAATPP---SPKGGLATPSPKGAPTTPAATPPSP 1228
Query: 1192 SDSLGSSSSSGSRRASAS 1209
L + S G+ A+
Sbjct: 1229 KGGLATPSPKGAPTTPAA 1246
Score = 34.3 bits (77), Expect = 1.2
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 1040 TASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHSPC 1099
T +PS GGP+ P + + T +A P+ G A P P G + P+ P SP
Sbjct: 1348 TLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPS-PKGDPTSPA 1406
Query: 1100 --EGLPSEAALTP--RPEGKVPSR 1119
P +A TP R PS+
Sbjct: 1407 VIPLSPKKAPATPVTREGAATPSK 1430
Score = 33.5 bits (75), Expect = 2.0
Identities = 42/155 (27%), Positives = 55/155 (35%), Gaps = 27/155 (17%)
Query: 1038 PTTASQRSPSKHGG---------PSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEK 1088
PTT + PS GG P+ P A P G GPA P P + K
Sbjct: 1218 PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG--GPATPPPKGAPTPPAATPPSLK 1275
Query: 1089 NVPESSPHSPCEGLPSEAALT-PRPEG---KVPSRLALGSRGGYNGRGWGSPGRPKKKHT 1144
+ PH +G P+ A +T P P+G P + A GSPG P K
Sbjct: 1276 GGLATPPH---KGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK-- 1330
Query: 1145 GMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWG 1179
AP + + P+ P P+S G
Sbjct: 1331 -------GAPTPPAVTPPSPKGTPTLPATTPSSKG 1358
Score = 33.1 bits (74), Expect = 2.6
Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 1030 SSFYSSSRPTTASQ---RSPSKHGGPSAPGALQPLTSGSAGPAQPG-----SVAGAGPGP 1081
SS +R T A + SPS G P+ P A P G GPA P + A P
Sbjct: 915 SSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKG--GPATPSPKWAPTPPAATPPS 972
Query: 1082 TEGFTEKNVPESSPHSPCEGLPSE--AALTPRPEG 1114
+G P+ +P P PS TP P+G
Sbjct: 973 PKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKG 1007
Score = 33.1 bits (74), Expect = 2.6
Identities = 53/198 (26%), Positives = 70/198 (35%), Gaps = 24/198 (12%)
Query: 531 PRPLPTEPAVRPKEP-GT--------KRKGLGEGVPSSQRGPRRLSAEGGDKALHKMGPG 581
P+ PT PAV P P GT KG G PSS+ GP +A K M P
Sbjct: 1329 PKGAPTPPAVTPPSPKGTPTLPATTPSSKG-GPTTPSSKEGPTPPAATPSHKGGPAMTPP 1387
Query: 582 GGKAKALGGAGSGSKGSAGGGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFP 641
K G A KG + LS + + P E + S L A T
Sbjct: 1388 SPKR---GPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLK 1444
Query: 642 ESPPPCPLHGGSRGPST--------FLPEPPDTYEEDGGVYFSEGPEPPTASVGPPG--L 691
++P GG PS+ P P V S P+ A+ P G
Sbjct: 1445 KAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPT 1504
Query: 692 LPGDV-CTQDDLPSTDES 708
LP + + ++P+T S
Sbjct: 1505 LPAVIPSSPKEVPATPSS 1522
Score = 32.3 bits (72), Expect = 4.4
Identities = 66/263 (25%), Positives = 89/263 (33%), Gaps = 53/263 (20%)
Query: 1432 TAGGSSTAREGATSCSASGIRAGGEAGRG-MPEGRGGPGTEPVTVAAAAVTAAATVVPVI 1490
TA T A S S G+ + R +G GP T +++ A+ +P
Sbjct: 780 TASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPEN 839
Query: 1491 SVG-SSLYPGPGLGHGHSPGLHPYTALQPHL--PCSPQYLTHPAH--------------- 1532
S+ P H +P P A P P SP+ +T P
Sbjct: 840 SLSFQGSKDSPATTHSPTPP-SPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKE 898
Query: 1533 -PAHPMPHMPRPAVFPVPSSAY-------PQGV--HPAFLGAQYPYSVTPPSLAATAVSF 1582
PA P P PA+ SS P+G+ P+ GA P + TPPS +
Sbjct: 899 GPATPAPKQA-PALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPAT- 956
Query: 1583 PVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALTTQPS 1642
P P AP T P P+ PA+ P+ +GA P T PS
Sbjct: 957 PSPKWAP-------TPPAATPPSPKG------------GPAT--PSPKGAPTPPAATPPS 995
Query: 1643 PLVSGGFPPPEEETHSQPVNPHS 1665
P P P+ V P S
Sbjct: 996 PKGGPATPSPKGAPTPPAVTPPS 1018
Score = 32.3 bits (72), Expect = 4.4
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 1038 PTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPHS 1097
PT + PS G P+ P A P + G GP P S G P P + K P +P S
Sbjct: 1333 PTPPAVTPPSPKGTPTLP-ATTPSSKG--GPTTPSSKEGPTP-PAATPSHKGGPAMTPPS 1388
Query: 1098 P--------CEGLPSEAALTPRPEGKVPS 1118
P +G P+ A+ P K P+
Sbjct: 1389 PKRGPAIPSPKGDPTSPAVIPLSPKKAPA 1417
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 47.0 bits (110), Expect = 2e-04
Identities = 62/281 (22%), Positives = 112/281 (39%), Gaps = 26/281 (9%)
Query: 1026 PQTLSSFYSSSRP---TTA--SQRSPSKHGGPSAPG-ALQPLTSGSAGPAQPGSVAGAGP 1079
P T +S +++ P TTA S++S + + P +P L P + S+G ++ + + + P
Sbjct: 112 PITSASMETTALPGSTTTAGLSEKSTTFYSSPRSPDRTLSPARTTSSGVSEKSTTSHSRP 171
Query: 1080 GPT------EGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGW 1133
GPT + T V + S S +P T P PS L S ++ G+
Sbjct: 172 GPTHTIAFPDSTTMPGVSQESTAS--HSIPGSTDTTLSPGTTTPSSLGPESTTFHSSPGY 229
Query: 1134 GSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRG---GWAPT---SWGRGQDSDSI 1187
R T +++S P +S SP + P PT SW +D+
Sbjct: 230 TKTTRLPDNTTTSGLLEASTPVHSSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPA 289
Query: 1188 SSSSSDSLGSSSSS--GSRRASASGGARAKTVEVGRYKGRRPESHAP---HVPNQPSEAA 1242
S ++ + S++ S ++ + A + +G + P +P P+ +A
Sbjct: 290 PSGTTSAFVKLSTTYHSSPSSTPTTHFSASSTTLGHSEESTPVHSSPVATATTPPPARSA 349
Query: 1243 AHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLH 1283
+ E T ++ G++ T F S++ GH H
Sbjct: 350 TSGHVE-ESTAYHRSPGSTQTMHFPESSTTSGHSEESATFH 389
Score = 39.7 bits (91), Expect = 0.027
Identities = 78/307 (25%), Positives = 112/307 (36%), Gaps = 65/307 (21%)
Query: 1023 THKPQTLSSFYSSSRPTTASQRSPSKH-----GGPSAPGALQPLTSGSAGPA------QP 1071
TH P ++S S TT+ R S H G + PG Q T+ + P P
Sbjct: 505 THLPARMTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSP 564
Query: 1072 GSVAGAG-----------PGPTE-----------GFTEKNVP-ESSPHSPCEGLPSEAAL 1108
GS + PG TE G E + P SS SP L +
Sbjct: 565 GSTTASSLGPEYTTFHSSPGSTETTLLPDNTTASGLLEASTPVHSSTRSPHTTLSPAGST 624
Query: 1109 TPR---------PEGKVPSRLALGSRGGY---NGRGWGSPGRPKKKHTGMASIDSSAPE- 1155
T + P K + + + GSP H S S E
Sbjct: 625 TRQGESTTFHSWPSSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEE 684
Query: 1156 -TTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRAS------A 1208
TT SSP S + + + T+ GRG++S + SS++ ++ S+ S+ S +
Sbjct: 685 STTYHSSPG-STQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHS 743
Query: 1209 SGGARAKT--VEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIF 1266
S G+ A T + GR ES A H +Q + +VL+ G S+TS
Sbjct: 744 SPGSTATTHFPDSSTTSGRSEESTASH-SSQDATGTIVLPARSTNSVLL---GESTTS-- 797
Query: 1267 THPSSSG 1273
P SSG
Sbjct: 798 --PISSG 802
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 47.0 bits (110), Expect = 2e-04
Identities = 62/281 (22%), Positives = 112/281 (39%), Gaps = 26/281 (9%)
Query: 1026 PQTLSSFYSSSRP---TTA--SQRSPSKHGGPSAPG-ALQPLTSGSAGPAQPGSVAGAGP 1079
P T +S +++ P TTA S++S + + P +P L P + S+G ++ + + + P
Sbjct: 256 PITSASMETTALPGSTTTAGLSEKSTTFYSSPRSPDRTLSPARTTSSGVSEKSTTSHSRP 315
Query: 1080 GPT------EGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGW 1133
GPT + T V + S S +P T P PS L S ++ G+
Sbjct: 316 GPTHTIAFPDSTTMPGVSQESTAS--HSIPGSTDTTLSPGTTTPSSLGPESTTFHSSPGY 373
Query: 1134 GSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRG---GWAPT---SWGRGQDSDSI 1187
R T +++S P +S SP + P PT SW +D+
Sbjct: 374 TKTTRLPDNTTTSGLLEASTPVHSSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPA 433
Query: 1188 SSSSSDSLGSSSSS--GSRRASASGGARAKTVEVGRYKGRRPESHAP---HVPNQPSEAA 1242
S ++ + S++ S ++ + A + +G + P +P P+ +A
Sbjct: 434 PSGTTSAFVKLSTTYHSSPSSTPTTHFSASSTTLGHSEESTPVHSSPVATATTPPPARSA 493
Query: 1243 AHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLH 1283
+ E T ++ G++ T F S++ GH H
Sbjct: 494 TSGHVE-ESTAYHRSPGSTQTMHFPESSTTSGHSEESATFH 533
Score = 40.4 bits (93), Expect = 0.016
Identities = 75/307 (24%), Positives = 110/307 (35%), Gaps = 65/307 (21%)
Query: 1023 THKPQTLSSFYSSSRPTTASQRSPSKH-----GGPSAPGALQPLTSGSAGPA------QP 1071
TH P +++S S TT+ R S H G + PG Q T+ + P P
Sbjct: 649 THLPASMTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSP 708
Query: 1072 GSVAGAG-----------PGPTE-----------GFTEKNVP-ESSPHSPCEGLPSEAAL 1108
GS + PG TE G E ++P SS SP L +
Sbjct: 709 GSTTASSLGPEYTTFHSRPGSTETTLLPDNTTASGLLEASMPVHSSTRSPHTTLSPAGST 768
Query: 1109 TPR---------PEGKVPSRLALGSRGGY---NGRGWGSPGRPKKKHTGMASIDSSAPE- 1155
T + P K + + + GSP H S S E
Sbjct: 769 TRQGESTTFHSWPSSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEE 828
Query: 1156 -TTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRAS------A 1208
TT SSP S + + + T+ GRG++S + SS++ ++ S+ S+ S +
Sbjct: 829 STTYHSSPG-STQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHS 887
Query: 1209 SGGARAKT--VEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIF 1266
S G+ A T + GR ES A H +A T + G ++
Sbjct: 888 SPGSTATTHFPDSSTTSGRSEESTASH---SSQDATGTIVLPARSTTSVLLGEST----- 939
Query: 1267 THPSSSG 1273
T P SSG
Sbjct: 940 TSPISSG 946
Score = 38.5 bits (88), Expect = 0.061
Identities = 72/278 (25%), Positives = 99/278 (35%), Gaps = 67/278 (24%)
Query: 1032 FYSSSRPTTASQRSPSKHGGPSAPGAL-----------------QPLTSGSAGP-AQPGS 1073
F SS + S+ S + H A G + P++SGS A PGS
Sbjct: 3537 FPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGS 3596
Query: 1074 VAGAGPGPTEGFTEKNVP-ESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRG 1132
T G +EK+ SSP SP L S A+ T G +
Sbjct: 3597 TT------TPGLSEKSTTFHSSPRSPATTL-SPASTTS---------------SGVSEES 3634
Query: 1133 WGSPGRPKKKHTGMASIDSSAP-----ETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSI 1187
S RP HT ++ P TTS SSP + L TS G Q+S +
Sbjct: 3635 TTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTS-GSSQES-TT 3692
Query: 1188 SSSSSDSLGSSSSSGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAA----- 1242
S SSS S ++ S GS A + G E + +H P+ + +
Sbjct: 3693 SHSSSGSTDTALSPGSTTALSFG------QESTTFHSSPGSTHTTLFPDSTTSSGIVEAS 3746
Query: 1243 --AHFYFELAKTVLIKAGGNS------STSIFTHPSSS 1272
H +T L A S ST+ THP+S+
Sbjct: 3747 TRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPAST 3784
Score = 37.4 bits (85), Expect = 0.14
Identities = 71/278 (25%), Positives = 99/278 (35%), Gaps = 67/278 (24%)
Query: 1032 FYSSSRPTTASQRSPSKHGGPSAPGAL-----------------QPLTSGSAGP-AQPGS 1073
F SS + S+ S + H A G + P++SGS A PGS
Sbjct: 897 FPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGS 956
Query: 1074 VAGAGPGPTEGFTEKNVP-ESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRG 1132
T G +E++ SSP SP L S A+ T G +
Sbjct: 957 TT------TPGLSERSTTFHSSPRSPATTL-SPASTTS---------------SGVSEES 994
Query: 1133 WGSPGRPKKKHTGMASIDSSAP-----ETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSI 1187
S RP HT ++ P TTS SSP + L TS G Q+S +
Sbjct: 995 TTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTS-GPSQES-TT 1052
Query: 1188 SSSSSDSLGSSSSSGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAA----- 1242
S SSS S ++ S GS A + G E + +H P+ + +
Sbjct: 1053 SHSSSGSTDTALSPGSTTALSFG------QESTTFHSNPGSTHTTLFPDSTTSSGIVEAS 1106
Query: 1243 --AHFYFELAKTVLIKAGGNS------STSIFTHPSSS 1272
H +T L A S ST+ THP+S+
Sbjct: 1107 TRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPAST 1144
Score = 37.0 bits (84), Expect = 0.18
Identities = 70/282 (24%), Positives = 108/282 (38%), Gaps = 31/282 (10%)
Query: 1038 PTTAS--QRSPSKHGGPSAPGA-LQPLTSGSAGPAQPGSVAGAGPGPTE--GFTEK-NVP 1091
PTT S ++S + + P +P A L P T+ S+G ++ S + + PG T F + P
Sbjct: 2514 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTP 2573
Query: 1092 ESSPHS-PCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWG----SPGRPKKKHTGM 1146
S HS P T P S + S ++ G SPG G
Sbjct: 2574 GLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSPGSTTALSFGQ 2633
Query: 1147 ASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRA 1206
S TT SSP + L + TS G + S + SS+ GS ++ S +
Sbjct: 2634 ES-------TTFHSSPGSTHTTLFPD-STTSSGIVEASTRVHSST----GSPRTTLSPAS 2681
Query: 1207 SASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIF 1266
S S G + ++ ++ +H P+ PS A A T ++ G++ T+ F
Sbjct: 2682 STSPGLQGEST---TFQTHPASTHT--TPSPPSTATAPVE---ESTTYHRSPGSTPTTHF 2733
Query: 1267 THPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRT 1308
S++ GH H G H+ S S T
Sbjct: 2734 PASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTT 2775
Score = 36.6 bits (83), Expect = 0.23
Identities = 65/255 (25%), Positives = 101/255 (39%), Gaps = 42/255 (16%)
Query: 1038 PTTAS--QRSPSKHGGPSAPGA-LQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESS 1094
PTT S ++S + + P +P A L P T+ S+G ++ S + + PG T P+S+
Sbjct: 2988 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTH---TTAFPDST 3044
Query: 1095 PHSPCEGLPSEAALTPRPEGKVPSRLALGSR-----GGYNGRGWGSPGRPKKKHTGMASI 1149
S GL E + +G + L+ GS G + SPG + +I
Sbjct: 3045 TTS---GLSQEPTASHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETTLLPDDTI 3101
Query: 1150 DSSAPE-TTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISS--SSSDSLGSSSSSGSRRA 1206
S E +T S T S + TS G ++S + S SSSD+ S
Sbjct: 3102 TSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEESTTFQSWPSSSDTTPSPP------- 3154
Query: 1207 SASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIF 1266
G A VEV RP S +F + T L ++ ST++
Sbjct: 3155 ----GTTAAPVEVSTTYHSRPSS------------TPTTHFSASSTTLGRS--EESTTVH 3196
Query: 1267 THPSSSGGHQGPHRN 1281
+ P ++G P R+
Sbjct: 3197 SSPGATGTALFPTRS 3211
Score = 36.2 bits (82), Expect = 0.30
Identities = 65/255 (25%), Positives = 102/255 (40%), Gaps = 42/255 (16%)
Query: 1038 PTTAS--QRSPSKHGGPSAPGA-LQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESS 1094
PTT S ++S + + P +P A L P T+ S+G ++ S + + PG T P+S+
Sbjct: 4071 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTH---TTAFPDST 4127
Query: 1095 PHSPCEGLPSEAALTPRPEGKVPSRLALGSR-----GGYNGRGWGSPGRPKKKHTGMASI 1149
S GL E + +G + L+ GS G + SPG + +I
Sbjct: 4128 TTS---GLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETTLLPDDTI 4184
Query: 1150 DSSAPE-TTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISS--SSSDSLGSSSSSGSRRA 1206
S E +T S T S + TS G ++S + S SSSD+ S S+
Sbjct: 4185 TSGLVEASTPTHSSTGSLHTTLTPASSTSTGLQEESTTFQSWPSSSDTTPSPPST----- 4239
Query: 1207 SASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIF 1266
A VEV RP S +F + T L ++ ST++
Sbjct: 4240 ------TAVPVEVSTTYHSRPSS------------TPTTHFSASSTTLGRS--EESTTVH 4279
Query: 1267 THPSSSGGHQGPHRN 1281
+ P ++G P R+
Sbjct: 4280 SSPGATGTALFPTRS 4294
Score = 35.0 bits (79), Expect = 0.68
Identities = 52/252 (20%), Positives = 86/252 (34%), Gaps = 28/252 (11%)
Query: 1436 SSTAREGATSCSASGIRAGGEAGRGMPEGRGGP---GTEPVTVAAAAVTAAATVVPVISV 1492
+ST G++ S + + G + G G E T ++ + T+ P +
Sbjct: 3679 ASTTTSGSSQESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTT 3738
Query: 1493 GSSLYPGPGLGHGHSPGLHPYTALQPHLPCSP-------QYLTHPAHPAHPMPHMPRPAV 1545
S + H + P T L P SP + THPA H P P A
Sbjct: 3739 SSGIVEASTRVHSSTGS--PRTTLSPASSTSPGLQGESTAFQTHPAS-THTTPSPPSTAT 3795
Query: 1546 FPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSF----PVPSMAPITVHPYHTEPGL 1601
PV S + +P S T + + F P + H + G
Sbjct: 3796 APVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGE 3855
Query: 1602 PLPTSVACELWGQGTVSSVHPASTFPAIQGASL--------PALTTQPSPLVSGGFPPPE 1653
+ ++ G ++++ ++T P + AS P T P+ + S G
Sbjct: 3856 STTSRISP---GSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEES 3912
Query: 1654 EETHSQPVNPHS 1665
+ SQP + HS
Sbjct: 3913 TTSRSQPGSTHS 3924
Score = 33.9 bits (76), Expect = 1.5
Identities = 64/255 (25%), Positives = 100/255 (39%), Gaps = 42/255 (16%)
Query: 1038 PTTAS--QRSPSKHGGPSAPGA-LQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESS 1094
PTT S ++S + + P +P A L P T+ S+G ++ S + + PG T P+S+
Sbjct: 1431 PTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTH---TTAFPDST 1487
Query: 1095 PHSPCEGLPSEAALTPRPEGKVPSRLALGSR-----GGYNGRGWGSPGRPKKKHTGMASI 1149
S L E + +G + L+ GS G + SPG + +I
Sbjct: 1488 TTS---DLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETTLLPDDTI 1544
Query: 1150 DSSAPE-TTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISS--SSSDSLGSSSSSGSRRA 1206
S E +T S T S + TS G ++S + S SSSD+ S
Sbjct: 1545 TSGLVEASTPTHSSTGSLHTTLTPASSTSAGLQEESTTFQSWPSSSDTTPSPP------- 1597
Query: 1207 SASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIF 1266
G A VEV RP S +F + T L ++ ST++
Sbjct: 1598 ----GTTAAPVEVSTTYHSRPSS------------TPTTHFSASSTTLGRS--EESTTVH 1639
Query: 1267 THPSSSGGHQGPHRN 1281
+ P ++G P R+
Sbjct: 1640 SSPGATGTALFPTRS 1654
Score = 33.5 bits (75), Expect = 2.0
Identities = 52/252 (20%), Positives = 85/252 (33%), Gaps = 28/252 (11%)
Query: 1436 SSTAREGATSCSASGIRAGGEAGRGMPEGRGGP---GTEPVTVAAAAVTAAATVVPVISV 1492
+ST G + S + + G + G G E T ++ + T+ P +
Sbjct: 2122 ASTTTSGPSQESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTT 2181
Query: 1493 GSSLYPGPGLGHGHSPGLHPYTALQPHLPCSP-------QYLTHPAHPAHPMPHMPRPAV 1545
S + H + P T L P SP + THPA H P P A
Sbjct: 2182 SSGIVEASTRVHSSTGS--PRTTLSPASSTSPGLQGESTAFQTHPAS-THTTPSPPSTAT 2238
Query: 1546 FPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSF----PVPSMAPITVHPYHTEPGL 1601
PV S + +P S T + + F P + H + G
Sbjct: 2239 APVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGE 2298
Query: 1602 PLPTSVACELWGQGTVSSVHPASTFPAIQGASL--------PALTTQPSPLVSGGFPPPE 1653
+ ++ G ++++ ++T P + AS P T P+ + S G
Sbjct: 2299 STTSRISP---GSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEES 2355
Query: 1654 EETHSQPVNPHS 1665
+ SQP + HS
Sbjct: 2356 TTSRSQPGSTHS 2367
Score = 33.5 bits (75), Expect = 2.0
Identities = 52/252 (20%), Positives = 85/252 (33%), Gaps = 28/252 (11%)
Query: 1436 SSTAREGATSCSASGIRAGGEAGRGMPEGRGGP---GTEPVTVAAAAVTAAATVVPVISV 1492
+ST G + S + + G + G G E T ++ + T+ P +
Sbjct: 2596 ASTTTSGPSQESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTT 2655
Query: 1493 GSSLYPGPGLGHGHSPGLHPYTALQPHLPCSP-------QYLTHPAHPAHPMPHMPRPAV 1545
S + H + P T L P SP + THPA H P P A
Sbjct: 2656 SSGIVEASTRVHSSTGS--PRTTLSPASSTSPGLQGESTTFQTHPAS-THTTPSPPSTAT 2712
Query: 1546 FPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSF----PVPSMAPITVHPYHTEPGL 1601
PV S + +P S T + + F P + H + G
Sbjct: 2713 APVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGE 2772
Query: 1602 PLPTSVACELWGQGTVSSVHPASTFPAIQGASL--------PALTTQPSPLVSGGFPPPE 1653
+ ++ G ++++ ++T P + AS P T P+ + S G
Sbjct: 2773 STTSRISP---GSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEES 2829
Query: 1654 EETHSQPVNPHS 1665
+ SQP + HS
Sbjct: 2830 TTSRSQPGSTHS 2841
Score = 33.1 bits (74), Expect = 2.6
Identities = 52/252 (20%), Positives = 84/252 (33%), Gaps = 28/252 (11%)
Query: 1436 SSTAREGATSCSASGIRAGGEAGRGMPEGRGGP---GTEPVTVAAAAVTAAATVVPVISV 1492
+ST G + S + + G + G G E T + + T+ P +
Sbjct: 1039 ASTTTSGPSQESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTLFPDSTT 1098
Query: 1493 GSSLYPGPGLGHGHSPGLHPYTALQPHLPCSP-------QYLTHPAHPAHPMPHMPRPAV 1545
S + H + P T L P SP + THPA H P P A
Sbjct: 1099 SSGIVEASTRVHSSTGS--PRTTLSPASSTSPGLQGESTAFQTHPAS-THTTPSPPSTAT 1155
Query: 1546 FPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSF----PVPSMAPITVHPYHTEPGL 1601
PV S + +P S T + + F P + H + G
Sbjct: 1156 APVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGE 1215
Query: 1602 PLPTSVACELWGQGTVSSVHPASTFPAIQGASL--------PALTTQPSPLVSGGFPPPE 1653
+ ++ G ++++ ++T P + AS P T P+ + S G
Sbjct: 1216 STTSRISP---GSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEES 1272
Query: 1654 EETHSQPVNPHS 1665
+ SQP + HS
Sbjct: 1273 TTSRSQPGSTHS 1284
Score = 32.3 bits (72), Expect = 4.4
Identities = 55/232 (23%), Positives = 83/232 (35%), Gaps = 37/232 (15%)
Query: 1019 RESQTHKPQTLSSFYSSSRPTTASQRSPSKHGGP-SAPGALQPLTSGSAGPAQPGSVAGA 1077
R TH ++F S+ S+ S + H P S L P ++ ++GP+Q + + +
Sbjct: 2083 RPGSTHT----TAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHS 2138
Query: 1078 GPGPTE-----GFT-------EKNVPESSPHSPCEGL-PSEAALTPRPEGKVPSRLALGS 1124
PG T+ G T E SSP S L P + E + GS
Sbjct: 2139 SPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGS 2198
Query: 1125 -RGGYNGRGWGSPGRPKKK-----HTGMASIDSSAPETTS---DSSPTLSRRPLRGGWAP 1175
R + SPG + H S P T + + S T R P G P
Sbjct: 2199 PRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPSTATAPVEESTTYHRSP---GSTP 2255
Query: 1176 T-------SWGRGQDSDSISSSSSDSLGSSSSSGSRRASASGGARAKTVEVG 1220
T + + +I SS D+ G++ SS S G + + G
Sbjct: 2256 TTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPG 2307
Score = 32.0 bits (71), Expect = 5.7
Identities = 50/200 (25%), Positives = 78/200 (39%), Gaps = 23/200 (11%)
Query: 1032 FYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTE-------- 1083
F +SS + S++S H P A G + + + PG TE
Sbjct: 2259 FPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 2318
Query: 1084 ---GFTEKNVP-ESSPHSPCEGLPSEAALTPRPEGK--VPSRLALGS-RGGYNGRGWGSP 1136
G +E + SSP SP L S A++T G+ SR GS + +P
Sbjct: 2319 TTPGLSEASTTFYSSPRSPTTTL-SPASMTSLGVGEESTTSRSQPGSTHSTVSPASTTTP 2377
Query: 1137 GRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLG 1196
G ++ T +S S T +PT S R G PT++ S + + D
Sbjct: 2378 GLSEESTTVYSSSPGSTETTVFPRTPTTSVR----GEEPTTFHSRPASTHTTLFTED--- 2430
Query: 1197 SSSSSGSRRASASGGARAKT 1216
S++S + ++A G+ A T
Sbjct: 2431 STTSGLTEESTAFPGSPAST 2450
Score = 32.0 bits (71), Expect = 5.7
Identities = 52/221 (23%), Positives = 80/221 (36%), Gaps = 33/221 (14%)
Query: 1030 SSFYSSSRPTTASQRSPSKHGGP-SAPGALQPLTSGSAGPAQPGSVAGAGPGPTE----- 1083
++F S+ S+ S + H P S L P ++ ++GP+Q + + + PG T+
Sbjct: 2564 TAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSP 2623
Query: 1084 GFT-------EKNVPESSPHSPCEGL-PSEAALTPRPEGKVPSRLALGS-RGGYNGRGWG 1134
G T E SSP S L P + E + GS R +
Sbjct: 2624 GSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSPRTTLSPASST 2683
Query: 1135 SPGRPKKK-----HTGMASIDSSAPETTS---DSSPTLSRRPLRGGWAPT-------SWG 1179
SPG + H S P T + + S T R P G PT +
Sbjct: 2684 SPGLQGESTTFQTHPASTHTTPSPPSTATAPVEESTTYHRSP---GSTPTTHFPASSTTS 2740
Query: 1180 RGQDSDSISSSSSDSLGSSSSSGSRRASASGGARAKTVEVG 1220
+ +I SS D+ G++ SS S G + + G
Sbjct: 2741 GHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPG 2781
Score = 31.2 bits (69), Expect = 9.7
Identities = 30/134 (22%), Positives = 46/134 (34%), Gaps = 6/134 (4%)
Query: 516 PGASRSGGLEESRDRPRPLPTEPAVRPKEPGTKRKGLGEGVPSSQRGPRRLSAEGGDKAL 575
PG++ + GL E P PA T G+ E +S P +
Sbjct: 3594 PGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDST 3653
Query: 576 HKMGPGGGKAKALGGAGS------GSKGSAGGGSKRRLSSEDSSLEPDLAEMSLDDSSLA 629
G + GS + + G S+ +S SS D A ++L+
Sbjct: 3654 TTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGSSQESTTSHSSSGSTDTALSPGSTTALS 3713
Query: 630 LGAEASTFGGFPES 643
G E++TF P S
Sbjct: 3714 FGQESTTFHSSPGS 3727
>gi|194272180 plexin B1 [Homo sapiens]
Length = 2135
Score = 46.6 bits (109), Expect = 2e-04
Identities = 53/178 (29%), Positives = 67/178 (37%), Gaps = 24/178 (13%)
Query: 1462 PEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLP 1521
P RGGP P T A T A +PV S + G SP L L P P
Sbjct: 684 PPARGGPSPSPPTAPKALATPAPDTLPVEPGAPSTATASDISPGASPSL-----LSPWGP 738
Query: 1522 -CSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAV 1580
++ P P+ P P P P + P PA + S TP L A+ +
Sbjct: 739 WAGSGSISSPGSTGSPLHEEPSP---PSPQNG-PGTAVPA--PTDFRPSATPEDLLASPL 792
Query: 1581 S-FPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPAL 1637
S V ++ P P P +PL A TV PA+TFP G+ PAL
Sbjct: 793 SPSEVAAVPPADPGPEALHPTVPLDLPPA-------TV----PATTFPGAMGSVKPAL 839
>gi|40254442 plexin B1 [Homo sapiens]
Length = 2135
Score = 46.6 bits (109), Expect = 2e-04
Identities = 53/178 (29%), Positives = 67/178 (37%), Gaps = 24/178 (13%)
Query: 1462 PEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLP 1521
P RGGP P T A T A +PV S + G SP L L P P
Sbjct: 684 PPARGGPSPSPPTAPKALATPAPDTLPVEPGAPSTATASDISPGASPSL-----LSPWGP 738
Query: 1522 -CSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAV 1580
++ P P+ P P P P + P PA + S TP L A+ +
Sbjct: 739 WAGSGSISSPGSTGSPLHEEPSP---PSPQNG-PGTAVPA--PTDFRPSATPEDLLASPL 792
Query: 1581 S-FPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPAL 1637
S V ++ P P P +PL A TV PA+TFP G+ PAL
Sbjct: 793 SPSEVAAVPPADPGPEALHPTVPLDLPPA-------TV----PATTFPGAMGSVKPAL 839
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 46.6 bits (109), Expect = 2e-04
Identities = 56/214 (26%), Positives = 77/214 (35%), Gaps = 29/214 (13%)
Query: 1458 GRGMPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQ 1517
G G P+G P ++T A+++VP + SL PGP LG + L P L
Sbjct: 1703 GTGNPQG-------PFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLA 1755
Query: 1518 PHLPCSPQYLTHPAHPAHPMPHMP--RPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSL 1575
P P P PAH + P A P+S + PA + P + +L
Sbjct: 1756 PASPVGPA-------PAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLAL 1808
Query: 1576 AATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLP 1635
A + P + + V PLP ++ L VS P T G P
Sbjct: 1809 APASTQSPASQASSLVV---SASGAAPLPVTMVSRL----PVSKDEP-DTLTLRSGPPSP 1860
Query: 1636 ALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHL 1669
PS S G P P + P +P L L
Sbjct: 1861 -----PSTATSFGGPRPRRQPPPPPRSPFYLDSL 1889
Score = 39.7 bits (91), Expect = 0.027
Identities = 59/221 (26%), Positives = 81/221 (36%), Gaps = 48/221 (21%)
Query: 1461 MPEGRGGPGTEP--VTVAAAAVTAAATVVPVISVGSSLYPG------------PGLGH-- 1504
+P G P P + +A+A+T P S+ SS PG PGL
Sbjct: 1484 VPAAPGPPSLAPSGASPSASALTLGLATAP--SLSSSQTPGHPLLLAPTSSHVPGLNSTV 1541
Query: 1505 --GHSPGLHPYTALQPHLPCSP-----------------QYLTHPAHP-AHPMPHM---- 1540
SP L P +AL P +P Q L P P A P +
Sbjct: 1542 APACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPS 1601
Query: 1541 PRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSL---AATAVSFPVPSMAPITVHPYHT 1597
P P + P+P A G P +Q P V PS + A + PVP+ P+ + P T
Sbjct: 1602 PAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPV-LAPSST 1660
Query: 1598 EPGLPLPTSVACELWGQGTVSSVHPASTFPAIQGASLPALT 1638
+ LP P V L + ++ A G S P+ T
Sbjct: 1661 QTMLPAP--VPSPLPSPASTQTLALAPALAPTLGGSSPSQT 1699
Score = 37.0 bits (84), Expect = 0.18
Identities = 57/198 (28%), Positives = 78/198 (39%), Gaps = 26/198 (13%)
Query: 1468 PGTEPVTVAAAAVTAAATVVPVISVGSSLYPGPG--LGHGHSPGLHPYT---ALQPHLPC 1522
P + P+TV+A+ +V P ++ PGP G SP T A P L
Sbjct: 1458 PISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSL-S 1516
Query: 1523 SPQYLTHPAHPAHPMPHMP------RPAVFP--VPSSA----YPQGVHPAFLGAQYPYSV 1570
S Q HP A H+P PA P VP+SA +P +PA A +
Sbjct: 1517 SSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASL---L 1573
Query: 1571 TPPSLAATAVSFPV-PSMAPIT--VHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTF- 1626
P S A+ A++ P+ P AP T + P P PLP SS P
Sbjct: 1574 APASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMA 1633
Query: 1627 -PAIQGASLPALTTQPSP 1643
+ G SL + + P+P
Sbjct: 1634 PSSTPGTSLASASPVPAP 1651
Score = 36.2 bits (82), Expect = 0.30
Identities = 47/157 (29%), Positives = 60/157 (38%), Gaps = 40/157 (25%)
Query: 1503 GHGHSPGLHPYTALQPHLP--CSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPA 1560
G H+P + + P CSP A P P PRP P P+SA PA
Sbjct: 2408 GANHTPVISAHQTRSTTTPPRCSP------ARERVPRP-APRPR--PTPASA------PA 2452
Query: 1561 FLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSV------ACELWGQ 1614
+ A P V+ P P+ + PIT+ P H P P P+ + AC
Sbjct: 2453 AIPALVPVPVSAP--------VPISAPNPITILPVHILPSPPPPSQIPPCSSPACT---P 2501
Query: 1615 GTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPP 1651
+ PA T P Q L T SPL+ G PP
Sbjct: 2502 PPACTPPPAHTPPPAQ----TCLVTPSSPLLLG--PP 2532
Score = 33.5 bits (75), Expect = 2.0
Identities = 50/199 (25%), Positives = 73/199 (36%), Gaps = 35/199 (17%)
Query: 1469 GTEPVTVAAAAVTAAATVVP-VISVGSSLYPG----PGLGHGHSPGLHPYTALQP----- 1518
G PV A A ++ +P V++ +L PG P LG +P P T ++P
Sbjct: 1320 GLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTP-TLVRPLLKLV 1378
Query: 1519 HLPCSPQYLTHP-------AHPAHPMPHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVT 1571
H P + P + P H +P PA P+P P P S +
Sbjct: 1379 HSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSS 1438
Query: 1572 PPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVHPASTFPAIQG 1631
P T + P P+ AP+T+ P+ + G ++SV P P +
Sbjct: 1439 LPISVPT--TLPAPASAPLTI---------PISAPLTVSASGPALLTSVTPPLA-PVV-- 1484
Query: 1632 ASLPALTTQPSPLVSGGFP 1650
PA PS SG P
Sbjct: 1485 ---PAAPGPPSLAPSGASP 1500
Score = 31.2 bits (69), Expect = 9.7
Identities = 28/127 (22%), Positives = 41/127 (32%), Gaps = 22/127 (17%)
Query: 1557 VHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWG--- 1613
VH G Q+ P +A P P P++V P T P PT ++ L
Sbjct: 1239 VHLVSAGGQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQV 1298
Query: 1614 -------------------QGTVSSVHPASTFPAIQGASLPALTTQPSPLVSGGFPPPEE 1654
+ ++ V P + P + LPA+ L G P P
Sbjct: 1299 PPTMVNNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTL 1358
Query: 1655 ETHSQPV 1661
T P+
Sbjct: 1359 GTARAPM 1365
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 46.2 bits (108), Expect = 3e-04
Identities = 59/234 (25%), Positives = 92/234 (39%), Gaps = 18/234 (7%)
Query: 985 EGTRREKGDLALALMITYKD-DQAKLKKILDKLLDRESQT----HKPQTLSSFYSSSRPT 1039
+G RR + L + + ++ K KK + LL RE +P++L S S P
Sbjct: 2449 KGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLREDPGAGGWQEPKSLLSL--GSYPP 2506
Query: 1040 TASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKN-VPESSPHSP 1098
A P + G L + GP +G P + E++ ES S
Sbjct: 2507 AAGSSEPKAPWPKATDGDL----AQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSS 2562
Query: 1099 CEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETTS 1158
S ++ + G G + G G G G ++ AS +++P ++S
Sbjct: 2563 SSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGG------RNCSAASSRAASPASSS 2616
Query: 1159 DSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASASGGA 1212
SS + S + +S S S SSSSS S SSSSS S +S+S +
Sbjct: 2617 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2670
Score = 38.9 bits (89), Expect = 0.047
Identities = 58/248 (23%), Positives = 78/248 (31%), Gaps = 17/248 (6%)
Query: 513 PSRPGASRSGGLEESRDRPRP-LPTEPAVRPKEPG---TKRKGL--GEGVPSSQRGPRRL 566
P P + G + P P L E + PK P ++ G E SS G
Sbjct: 2513 PKAPWPKATDG--DLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSS 2570
Query: 567 SAEGGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGSKRR--LSSEDSSLEPDLAEMSLD 624
S+ G G GG G+G + + S+ SS SS + S
Sbjct: 2571 SSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSS 2630
Query: 625 DSSLALGAEASTFGGFPESPPPCPLHGGSRGPSTFLPEPPDTYEEDGGVYFSEGPEP-PT 683
SS + + +S+ S S S+ T +ED + P PT
Sbjct: 2631 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPT 2690
Query: 684 ASVGPPGLLPGDVCTQ--DDLPSTDESGNGLPKTKEAAPAVGEEDDDYQAYYLNAQDGAG 741
A LP Q PS G P + AP Q AQ GA
Sbjct: 2691 AGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAP----PPQPTQPLQPKAQAGAK 2746
Query: 742 GEEEKAEG 749
+K EG
Sbjct: 2747 SRPKKREG 2754
Score = 38.1 bits (87), Expect = 0.080
Identities = 44/174 (25%), Positives = 62/174 (35%), Gaps = 24/174 (13%)
Query: 1060 PLTSGSAGPAQPGSVAGAG-----PGPTEGFTEKNVPESSPHSPCE--GLPSEAALTPRP 1112
P +GS+ P P A G PGP F + P+S + E G + +
Sbjct: 2505 PPAAGSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSS 2564
Query: 1113 EGKVPSRLALGSRG-----------------GYNGRGWGSPGRPKKKHTGMASIDSSAPE 1155
G S + S G G GR + +S SS+
Sbjct: 2565 SGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSS 2624
Query: 1156 TTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASAS 1209
++S SS + S + +S S S SSSSS S SSSSS + +S
Sbjct: 2625 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSS 2678
Score = 32.0 bits (71), Expect = 5.7
Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Query: 1021 SQTHKPQTLSSFYSSSRPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG 1080
S + + SS SSS +++S S S S+ + + S A P AG
Sbjct: 2637 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQ 2696
Query: 1081 ---PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPG 1137
PT+ + S HSP + P+ P P+ P + + G+
Sbjct: 2697 AALPTKATKQAGKARPSAHSPGKKTPAPQPQAPPPQPTQPLQPKAQA---------GAKS 2747
Query: 1138 RPKKK 1142
RPKK+
Sbjct: 2748 RPKKR 2752
>gi|6912752 zinc finger protein 281 [Homo sapiens]
Length = 895
Score = 46.2 bits (108), Expect = 3e-04
Identities = 70/284 (24%), Positives = 105/284 (36%), Gaps = 30/284 (10%)
Query: 581 GGGKAKALGGAGSGSKGSAGGGSKRRLSSEDSSLEPDLAE-MSLDDSSLALGAEASTFGG 639
GGG + GG+GSG GS GGG S + +EP + M + + L + G
Sbjct: 10 GGGGTGSSGGSGSGGGGSGGGGGGGS-SGRRAEMEPTFPQGMVMFNHRLPPVTSFTRPAG 68
Query: 640 FPESPPPCPLHGGSRGPSTFLPEPPDTYEEDGGVYFSEGPEPPTASVGPPGLLPGDVCTQ 699
PP C L + P PP + + F + P A+ P +
Sbjct: 69 SAAPPPQCVLSSSTSAAPAAEPPPPPAPD----MTFKKEPAASAAA------FPSQRTSW 118
Query: 700 DDLPSTDESGNGLPKTKEAAPAVGEEDDDYQAYYLNAQDG--AGGEEEK--AEGGAGEEH 755
L S L K+ PA EE + ++ + G AG EE GG G H
Sbjct: 119 GFLQS-------LVSIKQEKPADPEEQQSHHHHHHHHYGGLFAGAEERSPGLGGGEGGSH 171
Query: 756 DLFAGLKPLEQESRMEVLFACAEALHAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAK 815
+ L L Q + + + L + ++ T E QD N K P ++
Sbjct: 172 GVIQDLSILHQHVQQQPAQHHRDVLLSSSSRTDDHHGTEEPKQD--TNVKKAKRPKPESQ 229
Query: 816 GKKNKVSTSRQTWVATNTLSKAAFLLTVLSERP---EHHNLAFR 856
G K K S + + + A L S++P +H + AFR
Sbjct: 230 GIKAKRKPSASSKPSLVGDGEGAILSP--SQKPHICDHCSAAFR 271
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,806,105
Number of Sequences: 37866
Number of extensions: 5036732
Number of successful extensions: 32460
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 1086
Number of HSP's that attempted gapping in prelim test: 23006
Number of HSP's gapped (non-prelim): 9655
length of query: 1842
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1725
effective length of database: 13,817,196
effective search space: 23834663100
effective search space used: 23834663100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.