C1orf115 2462

Name: C1orf115	Sequence: fasta or formatted (142aa)		NCBI GI: 121582460
Description: hypothetical protein LOC79762		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.8 21 3 C cysteine 0.7 1 1 D aspartate 2.1 3 1 E glutamate 10.6 15 2 F phenylalanine 2.8 4 1 G glycine 9.9 14 1 H histidine 1.4 2 1 I isoleucine 2.8 4 2 K lysine 5.6 8 2 L leucine 7.0 10 2 M methionine 0.7 1 1 N asparagine 0.7 1 1 P proline 5.6 8 1 Q glutamine 1.4 2 1 R arginine 12.7 18 2 S serine 6.3 9 2 T threonine 3.5 5 1 V valine 7.0 10 2 W tryptophan 0.0 0 0 Y tyrosine 4.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC79762 PHF1 0.031 PHD finger protein 1 isoform a FAM171A2 0.027 family with sequence similarity 171, member A2 [Hom... AKAP4 0.024 A-kinase anchor protein 4 isoform 2 AKAP4 0.024 A-kinase anchor protein 4 isoform 1 KRI1 0.020 KRI1 homolog ZNF516 0.020 zinc finger protein 516 CT47B1 0.020 cancer/testis antigen family 147, member B1 RBM19 0.016 RNA binding motif protein 19 RBM19 0.016 RNA binding motif protein 19 RBM19 0.016 RNA binding motif protein 19 LOC100127891 0.016 PREDICTED: similar to hCG2042508 LOC100127891 0.016 PREDICTED: similar to hCG2042508 LOC100127891 0.016 PREDICTED: similar to hCG2042508 BSN 0.016 bassoon protein MARCKS 0.016 myristoylated alanine-rich protein kinase C substra... CALD1 0.016 caldesmon 1 isoform 1 OGFR 0.016 opioid growth factor receptor SIX5 0.016 sine oculis homeobox homolog 5 PSD 0.016 pleckstrin and Sec7 domain containing TCOF1 0.012 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.012 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.012 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.012 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.012 Treacher Collins-Franceschetti syndrome 1 isoform a ... NEFL 0.012 neurofilament, light polypeptide 68kDa LAMB1 0.012 laminin, beta 1 precursor ORC1L 0.012 origin recognition complex, subunit 1 LAMA3 0.012 laminin alpha 3 subunit isoform 1 LAMA3 0.012 laminin alpha 3 subunit isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.