Guide to the Human Genome
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Name: ORC1L Sequence: fasta or formatted (861aa) NCBI GI: 31795544
Description:

origin recognition complex, subunit 1

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         67           2
 C cysteine            2.2         19           1
 D aspartate           4.3         37           3
 E glutamate           7.4         64           3
 F phenylalanine       2.6         22           1
 G glycine             3.3         28           2
 H histidine           2.4         21           1
 I isoleucine          4.9         42           2
 K lysine              6.9         59           2
 L leucine            10.2         88           3
 M methionine          1.9         16           2
 N asparagine          2.8         24           1
 P proline             6.5         56           3
 Q glutamine           5.2         45           2
 R arginine            8.1         70           2
 S serine              8.9         77           3
 T threonine           6.0         52           2
 V valine              5.6         48           2
 W tryptophan          0.8          7           1
 Y tyrosine            2.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   origin recognition complex, subunit 1 
CDC6                  0.086   cell division cycle 6 protein 
NEFH                  0.021   neurofilament, heavy polypeptide 200kDa 
SRRM2                 0.015   splicing coactivator subunit SRm300 
ORC4L                 0.011   origin recognition complex subunit 4 
ORC4L                 0.011   origin recognition complex subunit 4 
ORC4L                 0.011   origin recognition complex subunit 4 
SSRP1                 0.011   structure specific recognition protein 1 
CCDC93                0.011   coiled-coil domain containing 93 
SRRM1                 0.011   serine/arginine repetitive matrix 1 
SON                   0.010   SON DNA-binding protein isoform F 
SON                   0.010   SON DNA-binding protein isoform B 
CEP170                0.010   centrosomal protein 170kDa isoform beta 
CEP170                0.010   centrosomal protein 170kDa isoform alpha 
CEP170                0.010   centrosomal protein 170kDa isoform gamma 
MAP1B                 0.009   microtubule-associated protein 1B 
SPEN                  0.008   spen homolog, transcriptional regulator 
MYH13                 0.008   myosin, heavy polypeptide 13, skeletal muscle [Homo...
PRPF4B                0.008   serine/threonine-protein kinase PRP4K 
MAP7D1                0.008   MAP7 domain containing 1 
CD2AP                 0.008   CD2-associated protein 
RBBP6                 0.008   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.008   retinoblastoma-binding protein 6 isoform 1 
NOLC1                 0.008   nucleolar and coiled-body phosphoprotein 1 
TRIOBP                0.008   TRIO and F-actin binding protein isoform 6 
MUC3A                 0.007   PREDICTED: mucin 3A, cell surface associated, parti...
DUSP27                0.007   dual specificity phosphatase 27 
ACIN1                 0.007   apoptotic chromatin condensation inducer 1 
MUC3A                 0.007   PREDICTED: mucin 3A, intestinal 
USP8                  0.007   ubiquitin specific peptidase 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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