Guide to the Human Genome
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Name: PLEKHF2 Sequence: fasta or formatted (249aa) NCBI GI: 13375827
Description:

phafin 2

Referenced in:

Inositol Pathways
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         16           2
 C cysteine            4.8         12           1
 D aspartate           8.0         20           7
 E glutamate           4.0         10           1
 F phenylalanine       3.6          9           2
 G glycine             4.8         12           1
 H histidine           2.0          5           2
 I isoleucine          5.6         14           2
 K lysine              8.4         21           3
 L leucine             7.2         18           2
 M methionine          2.0          5           1
 N asparagine          5.2         13           1
 P proline             5.2         13           1
 Q glutamine           3.2          8           1
 R arginine            5.6         14           2
 S serine              8.8         22           2
 T threonine           5.2         13           1
 V valine              6.4         16           2
 W tryptophan          1.2          3           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phafin 2 
PLEKHF1               0.548   apoptosis-inducing protein D 
FGD6                  0.202   FYVE, RhoGEF and PH domain containing 6 
FGD4                  0.130   FYVE, RhoGEF and PH domain containing 4 
FGD2                  0.124   FYVE, RhoGEF and PH domain containing 2 
FGD1                  0.122   faciogenital dysplasia protein 
ZFYVE26               0.108   zinc finger, FYVE domain containing 26 
FGD5                  0.102   FYVE, RhoGEF and PH domain containing 5 
RUFY2                 0.096   RUN and FYVE domain-containing 2 isoform a 
ZFYVE9                0.096   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
RUFY1                 0.094   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.094   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.094   RUN and FYVE domain-containing 1 isoform a 
ZFYVE9                0.092   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.092   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE16               0.092   zinc finger, FYVE domain containing 16 
ZFYVE16               0.092   zinc finger, FYVE domain containing 16 
EEA1                  0.090   early endosome antigen 1, 162kD 
ZFYVE28               0.081   zinc finger, FYVE domain containing 28 
FARP1                 0.077   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
MTMR3                 0.075   myotubularin-related protein 3 isoform c 
FGD3                  0.071   FYVE, RhoGEF and PH domain containing 3 
FGD3                  0.071   FYVE, RhoGEF and PH domain containing 3 
HGS                   0.071   hepatocyte growth factor-regulated tyrosine kinase su...
MTMR4                 0.071   myotubularin related protein 4 
FARP2                 0.071   FERM, RhoGEF and pleckstrin domain protein 2 
WDFY1                 0.071   WD repeat and FYVE domain containing 1 
ANKFY1                0.069   ankyrin repeat and FYVE domain containing 1 isoform...
MTMR3                 0.069   myotubularin-related protein 3 isoform b 
ZFYVE1                0.061   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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