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Search of human proteins with 24308309
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308309 transmembrane protein 163 [Homo sapiens]
(289 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308309 transmembrane protein 163 [Homo sapiens] 565 e-161
gi|40254851 protein kinase PKNbeta [Homo sapiens] 40 0.002
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 38 0.012
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 38 0.012
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 38 0.012
gi|44662823 hemojuvelin isoform b [Homo sapiens] 38 0.012
gi|47458048 hemojuvelin isoform a precursor [Homo sapiens] 38 0.012
gi|110431370 espin [Homo sapiens] 37 0.026
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 37 0.026
gi|55956910 meningioma 1 [Homo sapiens] 36 0.034
gi|27544941 myosin IF [Homo sapiens] 36 0.034
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 36 0.034
gi|46852172 kinesin family member 13B [Homo sapiens] 36 0.034
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 35 0.059
gi|150170670 piccolo isoform 2 [Homo sapiens] 35 0.059
gi|150378539 piccolo isoform 1 [Homo sapiens] 35 0.059
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 35 0.059
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 35 0.059
gi|58761530 polycomb group ring finger 6 isoform a [Homo sapiens] 35 0.059
gi|37655165 polycomb group ring finger 6 isoform b [Homo sapiens] 35 0.059
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 35 0.077
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 35 0.077
gi|19924103 synapsin II isoform IIa [Homo sapiens] 35 0.077
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 35 0.077
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 35 0.077
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 35 0.077
gi|19924101 synapsin II isoform IIb [Homo sapiens] 35 0.077
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 35 0.077
gi|13699803 WAS protein family, member 3 [Homo sapiens] 35 0.10
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 34 0.13
>gi|24308309 transmembrane protein 163 [Homo sapiens]
Length = 289
Score = 565 bits (1456), Expect = e-161
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MEPAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQVRISESGQF 60
MEPAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQVRISESGQF
Sbjct: 1 MEPAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQVRISESGQF 60
Query: 61 SDGLEDRGLLESSTRLKPHEAQNYRKKALWVSWFSIIVTLALAVAAFTVSVMRYSASAFG 120
SDGLEDRGLLESSTRLKPHEAQNYRKKALWVSWFSIIVTLALAVAAFTVSVMRYSASAFG
Sbjct: 61 SDGLEDRGLLESSTRLKPHEAQNYRKKALWVSWFSIIVTLALAVAAFTVSVMRYSASAFG 120
Query: 121 FAFDAILDVLSSAIVLWRYSNAAAVHSAHREYIACVILGVIFLLSSICIVVKAIHDLSTR 180
FAFDAILDVLSSAIVLWRYSNAAAVHSAHREYIACVILGVIFLLSSICIVVKAIHDLSTR
Sbjct: 121 FAFDAILDVLSSAIVLWRYSNAAAVHSAHREYIACVILGVIFLLSSICIVVKAIHDLSTR 180
Query: 181 LLPEVDDFLFSVSILSGILCSILAVLKFMLGKVLTSRALITDGFNSLVGGVMGFSILLSA 240
LLPEVDDFLFSVSILSGILCSILAVLKFMLGKVLTSRALITDGFNSLVGGVMGFSILLSA
Sbjct: 181 LLPEVDDFLFSVSILSGILCSILAVLKFMLGKVLTSRALITDGFNSLVGGVMGFSILLSA 240
Query: 241 EVFKHDSAVWYLDGSIGVLIGLTIFAYGVKLLIDMVPRVRQTRHYEMFE 289
EVFKHDSAVWYLDGSIGVLIGLTIFAYGVKLLIDMVPRVRQTRHYEMFE
Sbjct: 241 EVFKHDSAVWYLDGSIGVLIGLTIFAYGVKLLIDMVPRVRQTRHYEMFE 289
>gi|40254851 protein kinase PKNbeta [Homo sapiens]
Length = 889
Score = 40.4 bits (93), Expect = 0.002
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 9/158 (5%)
Query: 13 QGPT---VPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQVRISESGQFSDGL----E 65
Q PT P R H P GP+P +SP R+PP+L++ R + + G F L +
Sbjct: 520 QEPTSEETPRTKRPHMEPRTRRGPSPPASPTRKPPRLQDFRCLAVLGRGHFGKVLLVQFK 579
Query: 66 DRGLLESSTRLKPHEAQNYRKKALWVSWFSIIVTLALAVAAFTVSVMRYSASAFGFAFDA 125
G + LK E + + I+ + F +S++ ++ F
Sbjct: 580 GTGKYYAIKALKKQEVLSRDEIESLYCEKRILEAVGCTGHPFLLSLLACFQTSSHACF-- 637
Query: 126 ILDVLSSAIVLWRYSNAAAVHSAHREYIACVILGVIFL 163
+ + + ++ + R Y+ACV+LG+ FL
Sbjct: 638 VTEFVPGGDLMMQIHEDVFPEPQARFYVACVVLGLQFL 675
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 37.7 bits (86), Expect = 0.012
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Query: 1 MEPAA----GIQRRSSQGPTVP-------PPPRGHAPPAAAPGPAPLSSPVREP 43
+EPAA G++ Q P+VP PPP PA AP PAP+++PV P
Sbjct: 108 LEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAP 161
Score = 30.8 bits (68), Expect = 1.4
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 15 PTVPPPPRGHAPPAAAPGPAPLSSPVREP-----PQLEEERQVRISESGQ 59
P P P A PA AP PAP +P P PQ E+ + GQ
Sbjct: 175 PAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQ 224
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 37.7 bits (86), Expect = 0.012
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Query: 1 MEPAA----GIQRRSSQGPTVP-------PPPRGHAPPAAAPGPAPLSSPVREP 43
+EPAA G++ Q P+VP PPP PA AP PAP+++PV P
Sbjct: 108 LEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAP 161
Score = 30.8 bits (68), Expect = 1.4
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 15 PTVPPPPRGHAPPAAAPGPAPLSSPVREP-----PQLEEERQVRISESGQ 59
P P P A PA AP PAP +P P PQ E+ + GQ
Sbjct: 175 PAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQ 224
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 37.7 bits (86), Expect = 0.012
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Query: 1 MEPAA----GIQRRSSQGPTVP-------PPPRGHAPPAAAPGPAPLSSPVREP 43
+EPAA G++ Q P+VP PPP PA AP PAP+++PV P
Sbjct: 119 LEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAP 172
Score = 30.8 bits (68), Expect = 1.4
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 15 PTVPPPPRGHAPPAAAPGPAPLSSPVREP-----PQLEEERQVRISESGQ 59
P P P A PA AP PAP +P P PQ E+ + GQ
Sbjct: 186 PAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQ 235
>gi|44662823 hemojuvelin isoform b [Homo sapiens]
Length = 313
Score = 37.7 bits (86), Expect = 0.012
Identities = 18/26 (69%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 11 SSQGPTVPPPPRGHAPPAAAPG-PAP 35
S QGPT PPPPRG A P A G PAP
Sbjct: 7 SRQGPTAPPPPRGPALPGAGSGLPAP 32
>gi|47458048 hemojuvelin isoform a precursor [Homo sapiens]
Length = 426
Score = 37.7 bits (86), Expect = 0.012
Identities = 18/26 (69%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 11 SSQGPTVPPPPRGHAPPAAAPG-PAP 35
S QGPT PPPPRG A P A G PAP
Sbjct: 120 SRQGPTAPPPPRGPALPGAGSGLPAP 145
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 36.6 bits (83), Expect = 0.026
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 1 MEPAAGIQRRSSQGPTVPPPPRGHAPPAAAPG----PAPLSSPVREPP 44
+ P G+ R + PT PPPP PP PG P P P +PP
Sbjct: 414 LNPELGLPRGTIGKPTPPPPPPSFPPPPPPPGTQLPPPPPGYPAPKPP 461
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 36.6 bits (83), Expect = 0.026
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 15 PTVPPPPRGHAPPAAAPGP--------APLSSPVREPPQLEEERQVRISESGQFSDG 63
P PPPPR A PAA+P P + LSSP +P E + S G F G
Sbjct: 783 PPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGG 839
Score = 28.5 bits (62), Expect = 7.2
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 7 IQRRSSQGPTVPPPPRGHA-----PPA-AAPGPAPLSSP 39
+ R + P PPPPR PPA +AP P LSSP
Sbjct: 441 LSERPPRPPPPPPPPRDGPFPWPWPPAHSAPRPGTLSSP 479
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 36.2 bits (82), Expect = 0.034
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 1 MEPAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSP---VRE---PPQLEEERQVRI 54
+EP+ G + Q P PPP PP P P P VR+ PP L +Q
Sbjct: 327 LEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQ--- 383
Query: 55 SESGQFSDGLEDRG 68
E+G S GL+D G
Sbjct: 384 GEAGTPSGGLQDGG 397
>gi|27544941 myosin IF [Homo sapiens]
Length = 1098
Score = 36.2 bits (82), Expect = 0.034
Identities = 25/55 (45%), Positives = 26/55 (47%), Gaps = 14/55 (25%)
Query: 4 AAGIQRRSSQGPT--VPPPPRG----HAPPAAAPGPAPLS--------SPVREPP 44
A G RRSSQ PT P PPRG PP+A GP PL P R PP
Sbjct: 931 AKGKPRRSSQAPTRAAPAPPRGMDRNGVPPSARGGPLPLEIMSGGGTHRPPRGPP 985
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 36.2 bits (82), Expect = 0.034
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 3 PAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPV-REPPQ 45
P +G S GPT PPP + P AP P P SS V PPQ
Sbjct: 137 PTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Score = 33.1 bits (74), Expect = 0.29
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 3 PAAGIQRRSSQGPTVPP--PPRGHAPPAAAPGPAPLSSP 39
PA G+ + PP PP APP + PGP P P
Sbjct: 117 PAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPP 155
Score = 30.4 bits (67), Expect = 1.9
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 11 SSQGPTVPPPPRGHAPPAAA---PGPAPLSSP 39
SS PT PP G PP AA PGP P P
Sbjct: 171 SSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGP 202
Score = 29.3 bits (64), Expect = 4.2
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 2 EPAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPP 44
+P Q Q P PPPP+ + P A GP P PP
Sbjct: 86 QPPPHPQPHQQQQP--PPPPQDSSKPVVAQGPGPAPGVGSAPP 126
>gi|46852172 kinesin family member 13B [Homo sapiens]
Length = 1826
Score = 36.2 bits (82), Expect = 0.034
Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 13 QGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLE--------EERQVRISESGQFS 61
+ P PPP P PGP L SP RE P LE R+VR SE FS
Sbjct: 1604 EAPISHPPPPTAVPAEEPPGPQQLVSPGRERPDLEAPAPGSPFRVRRVRASELRSFS 1660
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 35.4 bits (80), Expect = 0.059
Identities = 31/87 (35%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 13 QGPTVPPPPRGHAPPAAAP-----GPAPLSSPVREPPQLEEERQVRISESGQFSDGLEDR 67
+G +PPPP+ PP AP GP P SP PP VR S F GLE R
Sbjct: 825 EGRGIPPPPQTAPPPPPAPYYFDSGPPPAFSP--PPPPGRAYDTVRSS----FKPGLEAR 878
Query: 68 ------GLLESSTRLKPHEAQNYRKKA 88
GL E L P +K+A
Sbjct: 879 LGAGAAGLYEPGAALGPLPYPERQKRA 905
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 35.4 bits (80), Expect = 0.059
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 11 SSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQVRIS 55
S+Q P PPPP PP P P PL P P + ++++ ++
Sbjct: 2402 SAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVA 2446
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 35.4 bits (80), Expect = 0.059
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 11 SSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQVRIS 55
S+Q P PPPP PP P P PL P P + ++++ ++
Sbjct: 2402 SAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVA 2446
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 35.4 bits (80), Expect = 0.059
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 12 SQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQV-RISESGQFSDGLE 65
++ P +PP + P + P PLSSP+ E PQ +EE V SG S LE
Sbjct: 1524 AEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLE 1578
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 7 IQRRSSQGPTVPPPPRGHAP-PAAAPGPAPLSSPVREPP 44
I+ SS G + P P +P P+ PGP P P EPP
Sbjct: 1069 IRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPP 1107
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 35.4 bits (80), Expect = 0.059
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 4 AAGIQRRSSQGPTVP--PPPRGHAPPAAAPGPAPLSSPVREP 43
A G R + P VP PPP PP P P P SSP++ P
Sbjct: 158 AHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTP 199
Score = 30.0 bits (66), Expect = 2.5
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 17 VPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQVRISESGQFSDGLEDRGLLESSTRL 76
VPPPP PP P AP P PP + +R ++ S L D ++ TRL
Sbjct: 3 VPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLAD---IQQGTRL 59
Query: 77 K 77
+
Sbjct: 60 R 60
Score = 29.3 bits (64), Expect = 4.2
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 4/25 (16%)
Query: 15 PTVPPPPRGHAPPAAAPGPAPLSSP 39
P +PPPP PP AP P P S+P
Sbjct: 9 PPLPPPP----PPLGAPPPPPPSAP 29
>gi|58761530 polycomb group ring finger 6 isoform a [Homo sapiens]
Length = 350
Score = 35.4 bits (80), Expect = 0.059
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 19/93 (20%)
Query: 4 AAGIQRRSSQGPTVPPPPRGHAPPAAAP-------GPAPLSS------PVREPPQLEEER 50
A + ++G PPP +PPA P GPAPLS PP+LE ER
Sbjct: 9 AGSVGAAKTEGAAALPPPPPVSPPALTPAPAAGEEGPAPLSETGAPGCSGSRPPELEPER 68
Query: 51 QVRISESGQFSDGLEDRG-LLESSTRLKPHEAQ 82
+ G+F ED LE L+ E +
Sbjct: 69 SL-----GRFRGRFEDEDEELEEEEELEEEEEE 96
>gi|37655165 polycomb group ring finger 6 isoform b [Homo sapiens]
Length = 275
Score = 35.4 bits (80), Expect = 0.059
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 19/93 (20%)
Query: 4 AAGIQRRSSQGPTVPPPPRGHAPPAAAP-------GPAPLSS------PVREPPQLEEER 50
A + ++G PPP +PPA P GPAPLS PP+LE ER
Sbjct: 9 AGSVGAAKTEGAAALPPPPPVSPPALTPAPAAGEEGPAPLSETGAPGCSGSRPPELEPER 68
Query: 51 QVRISESGQFSDGLEDRG-LLESSTRLKPHEAQ 82
+ G+F ED LE L+ E +
Sbjct: 69 SL-----GRFRGRFEDEDEELEEEEELEEEEEE 96
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 35.0 bits (79), Expect = 0.077
Identities = 19/42 (45%), Positives = 19/42 (45%)
Query: 2 EPAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREP 43
E A G Q QGP P PRG PA APGP EP
Sbjct: 189 EKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEP 230
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 35.0 bits (79), Expect = 0.077
Identities = 19/42 (45%), Positives = 19/42 (45%)
Query: 2 EPAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREP 43
E A G Q QGP P PRG PA APGP EP
Sbjct: 120 EKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEP 161
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 35.0 bits (79), Expect = 0.077
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 3 PAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSP 39
P G S+ PT P P PPA+AP P P +P
Sbjct: 40 PGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
Score = 33.9 bits (76), Expect = 0.17
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 10/47 (21%)
Query: 7 IQRRSSQGPTVPPPP------RGHAPPAAAPG----PAPLSSPVREP 43
+QR Q P PPPP APP A+PG P P S+P +P
Sbjct: 26 LQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQP 72
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 35.0 bits (79), Expect = 0.077
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 12/63 (19%)
Query: 1 MEPAAGIQRRSSQGPTV------------PPPPRGHAPPAAAPGPAPLSSPVREPPQLEE 48
++PAA +S Q V PPPP+ PP P PAP P ++ PQ +
Sbjct: 1624 VQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQP 1683
Query: 49 ERQ 51
+ Q
Sbjct: 1684 QPQ 1686
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 35.0 bits (79), Expect = 0.077
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 12/63 (19%)
Query: 1 MEPAAGIQRRSSQGPTV------------PPPPRGHAPPAAAPGPAPLSSPVREPPQLEE 48
++PAA +S Q V PPPP+ PP P PAP P ++ PQ +
Sbjct: 1624 VQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQP 1683
Query: 49 ERQ 51
+ Q
Sbjct: 1684 QPQ 1686
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 35.0 bits (79), Expect = 0.077
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 12/63 (19%)
Query: 1 MEPAAGIQRRSSQGPTV------------PPPPRGHAPPAAAPGPAPLSSPVREPPQLEE 48
++PAA +S Q V PPPP+ PP P PAP P ++ PQ +
Sbjct: 1624 VQPAANCSIKSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQP 1683
Query: 49 ERQ 51
+ Q
Sbjct: 1684 QPQ 1686
>gi|19924101 synapsin II isoform IIb [Homo sapiens]
Length = 478
Score = 35.0 bits (79), Expect = 0.077
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 3 PAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSP 39
P G S+ PT P P PPA+AP P P +P
Sbjct: 40 PGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTP 76
Score = 33.9 bits (76), Expect = 0.17
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 10/47 (21%)
Query: 7 IQRRSSQGPTVPPPP------RGHAPPAAAPG----PAPLSSPVREP 43
+QR Q P PPPP APP A+PG P P S+P +P
Sbjct: 26 LQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQP 72
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 35.0 bits (79), Expect = 0.077
Identities = 18/41 (43%), Positives = 19/41 (46%)
Query: 4 AAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPP 44
AA S GP P P A P AAP PAP + P PP
Sbjct: 153 AAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPP 193
Score = 33.9 bits (76), Expect = 0.17
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 3 PAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSP-----VREPP 44
PA R P PPP APPA AP P +P REPP
Sbjct: 164 PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPP 210
Score = 30.0 bits (66), Expect = 2.5
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 3 PAAGIQRR-----SSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQ 45
P AG +R +++ P +PPPP+ APP P P P PP+
Sbjct: 192 PPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQP---PPE 236
Score = 29.6 bits (65), Expect = 3.2
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 4 AAGIQ--RRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPP 44
AA +Q RR + P P PRG PAAA AP +P PP
Sbjct: 96 AARVQPPRRGATPPAPPRAPRG--APAAAAAAAPPPTPAPPPP 136
>gi|13699803 WAS protein family, member 3 [Homo sapiens]
Length = 502
Score = 34.7 bits (78), Expect = 0.10
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 3 PAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQ 51
P+ G+ + P PPPP G PP PG + SSP+ PP E +RQ
Sbjct: 386 PSTGLLVTAPPPPGPPPPPPG--PP--GPGSSLSSSPMHGPPVAEAKRQ 430
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 34.3 bits (77), Expect = 0.13
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 14 GPTVPPPPRGHAPPAAAPGPAPLSSPVREPPQLEEERQV 52
G +PPPP PP AP PAP+ R PP + + V
Sbjct: 595 GSELPPPP----PPPPAPAPAPVPDSARPPPAVAKRPPV 629
Score = 30.8 bits (68), Expect = 1.4
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 3 PAAGIQRRSSQGPTVPPPPRGHAPPAAAPGPAPLSSPVREPP 44
PA ++ + + G +P PP PP P P PL P PP
Sbjct: 532 PATPLKAKGTGGGGLPAPPDDFLPP--PPPPPPLDDPELPPP 571
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,209,134
Number of Sequences: 37866
Number of extensions: 567287
Number of successful extensions: 13832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 9869
Number of HSP's gapped (non-prelim): 3640
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.