Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PKN3 Sequence: fasta or formatted (889aa) NCBI GI: 40254851
Description:

protein kinase PKNbeta

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         73           3
 C cysteine            2.1         19           1
 D aspartate           3.4         30           1
 E glutamate           8.3         74           3
 F phenylalanine       4.0         36           2
 G glycine             6.9         61           2
 H histidine           2.2         20           1
 I isoleucine          2.5         22           2
 K lysine              4.6         41           2
 L leucine            13.3        118           3
 M methionine          1.5         13           2
 N asparagine          1.3         12           1
 P proline             9.0         80           3
 Q glutamine           6.2         55           2
 R arginine            8.3         74           2
 S serine              4.9         44           2
 T threonine           4.9         44           2
 V valine              5.7         51           2
 W tryptophan          1.2         11           2
 Y tyrosine            1.2         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase PKNbeta 
PKN2                  0.480   protein kinase N2 
PKN1                  0.475   protein kinase N1 isoform 1 
PKN1                  0.475   protein kinase N1 isoform 2 
PRKCB                 0.157   protein kinase C, beta isoform 2 
PRKCA                 0.154   protein kinase C, alpha 
AKT2                  0.153   AKT2 kinase 
AKT3                  0.152   AKT3 kinase isoform 1 
AKT3                  0.152   AKT3 kinase isoform 2 
PRKCG                 0.150   protein kinase C, gamma 
PRKCD                 0.150   protein kinase C, delta 
PRKCD                 0.150   protein kinase C, delta 
PRKCB                 0.149   protein kinase C, beta isoform 1 
PRKCE                 0.148   protein kinase C, epsilon 
PRKCH                 0.147   protein kinase C, eta 
AKT1                  0.147   AKT1 kinase 
AKT1                  0.147   AKT1 kinase 
AKT1                  0.147   AKT1 kinase 
PRKCQ                 0.145   protein kinase C, theta 
PRKCI                 0.140   protein kinase C, iota 
PRKCZ                 0.136   protein kinase C, zeta isoform 2 
PRKCZ                 0.136   protein kinase C, zeta isoform 2 
PRKCZ                 0.136   protein kinase C, zeta isoform 1 
SGK2                  0.135   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK1                  0.133   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.133   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.133   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.133   serum/glucocorticoid regulated kinase 1 isoform 2 [...
SGK2                  0.132   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK3                  0.131   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press