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Search of human proteins with 24308295
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308295 GrpE-like 1, mitochondrial [Homo sapiens]
(217 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308295 GrpE-like 1, mitochondrial [Homo sapiens] 429 e-120
gi|40255109 GrpE-like 2, mitochondrial [Homo sapiens] 179 1e-45
gi|67191208 ubiquitin C [Homo sapiens] 37 0.010
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 37 0.010
gi|11024714 ubiquitin B precursor [Homo sapiens] 37 0.013
gi|109134347 NY-REN-58 antigen [Homo sapiens] 37 0.013
gi|109134355 NY-REN-58 antigen [Homo sapiens] 37 0.013
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 36 0.022
gi|71061468 centromere protein E [Homo sapiens] 36 0.022
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 36 0.029
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 35 0.049
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 35 0.049
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 35 0.049
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 35 0.049
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 35 0.049
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 35 0.064
gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens] 34 0.084
gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens] 34 0.084
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 34 0.084
gi|221316624 dystonin isoform 4 [Homo sapiens] 34 0.084
gi|221316622 dystonin isoform 3 [Homo sapiens] 34 0.084
gi|221316618 dystonin isoform 2 [Homo sapiens] 34 0.084
gi|34577047 dystonin isoform 1 [Homo sapiens] 34 0.084
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 34 0.084
gi|7705415 hook homolog 1 [Homo sapiens] 34 0.11
gi|111548652 hypothetical protein LOC51057 isoform 2 [Homo sapiens] 34 0.11
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 34 0.11
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 34 0.11
gi|55741447 pleckstrin homology domain containing, family H (wit... 34 0.11
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 33 0.14
>gi|24308295 GrpE-like 1, mitochondrial [Homo sapiens]
Length = 217
Score = 429 bits (1102), Expect = e-120
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MAAQCVRLARRSLPALALSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTL 60
MAAQCVRLARRSLPALALSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTL
Sbjct: 1 MAAQCVRLARRSLPALALSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTL 60
Query: 61 LEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEK 120
LEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEK
Sbjct: 61 LEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEK 120
Query: 121 ATQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHEALFH 180
ATQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHEALFH
Sbjct: 121 ATQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHEALFH 180
Query: 181 TPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVKEA 217
TPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVKEA
Sbjct: 181 TPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVKEA 217
>gi|40255109 GrpE-like 2, mitochondrial [Homo sapiens]
Length = 225
Score = 179 bits (455), Expect = 1e-45
Identities = 92/196 (46%), Positives = 137/196 (69%), Gaps = 5/196 (2%)
Query: 24 PRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALA 83
P TAT Q+ +G++ + E PP E+ L + VKLE+++++ +Y+RA+A
Sbjct: 29 PLPFSTAT-QRTAGEDCRSEDPPDE--LGPPLAERALRVKAVKLEKEVQDLTVRYQRAIA 85
Query: 84 DTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKE-EIKDDNPHLKNLYE 142
D EN+R+R+Q+ VE+AK++GIQ+FCKDL+EVAD+LEK T+C+ +E E +D L+ ++
Sbjct: 86 DCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECISEESEPEDQKLTLEKVFR 145
Query: 143 GLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHEALFHTPV-EGKEPGTVALVSKVGYKL 201
GL++ E +++ VF KHGL KL P+G K+DP+EHE + H P G +PGTVALV + GYKL
Sbjct: 146 GLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGVGVQPGTVALVRQDGYKL 205
Query: 202 HGRTLRPALVGVVKEA 217
HGRT+R A V V E+
Sbjct: 206 HGRTIRLARVEVAVES 221
>gi|67191208 ubiquitin C [Homo sapiens]
Length = 685
Score = 37.4 bits (85), Expect = 0.010
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 46/188 (24%)
Query: 22 PSPRLLCTATKQKNSGQNLEEDMGQSEQ--------KADPPATEKTLLEEKVKLEEQLKE 73
P + L A KQ G+ L + Q E + KTL + + LE + +
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 173
Query: 74 TVEKYKRALADTENLRQRSQKLV------------------EEAKLY-------GIQAFC 108
T+E K + D E + Q+L+ +E+ L+ G+Q F
Sbjct: 174 TIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 233
Query: 109 KDL--------LEVADVLEKA-TQCVPKEEIKDDNPHL----KNLYEGLVMTEVQIQKVF 155
K L +E +D +E + KE I D L K L +G +++ IQK
Sbjct: 234 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293
Query: 156 TKHGLLKL 163
T H +L+L
Sbjct: 294 TLHLVLRL 301
Score = 37.0 bits (84), Expect = 0.013
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 46/188 (24%)
Query: 22 PSPRLLCTATKQKNSGQNLEEDMGQSEQ--------KADPPATEKTLLEEKVKLEEQLKE 73
P + L A KQ G+ L + Q E + KTL + + LE + +
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 325
Query: 74 TVEKYKRALADTENLRQRSQKLV------------------EEAKLY-------GIQAFC 108
T+E K + D E + Q+L+ +E+ L+ G+Q F
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 385
Query: 109 KDL--------LEVADVLEKA-TQCVPKEEIKDDNPHL----KNLYEGLVMTEVQIQKVF 155
K L +E +D +E + KE I D L K L +G +++ IQK
Sbjct: 386 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445
Query: 156 TKHGLLKL 163
T H +L+L
Sbjct: 446 TLHLVLRL 453
Score = 37.0 bits (84), Expect = 0.013
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 46/188 (24%)
Query: 22 PSPRLLCTATKQKNSGQNLEEDMGQSEQ--------KADPPATEKTLLEEKVKLEEQLKE 73
P + L A KQ G+ L + Q E + KTL + + LE + +
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 477
Query: 74 TVEKYKRALADTENLRQRSQKLV------------------EEAKLY-------GIQAFC 108
T+E K + D E + Q+L+ +E+ L+ G+Q F
Sbjct: 478 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 537
Query: 109 KDL--------LEVADVLEKA-TQCVPKEEIKDDNPHL----KNLYEGLVMTEVQIQKVF 155
K L +E +D +E + KE I D L K L +G +++ IQK
Sbjct: 538 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 597
Query: 156 TKHGLLKL 163
T H +L+L
Sbjct: 598 TLHLVLRL 605
Score = 37.0 bits (84), Expect = 0.013
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 46/188 (24%)
Query: 22 PSPRLLCTATKQKNSGQNLEEDMGQSEQ--------KADPPATEKTLLEEKVKLEEQLKE 73
P + L A KQ G+ L + Q E + KTL + + LE + +
Sbjct: 494 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 553
Query: 74 TVEKYKRALADTENLRQRSQKLV------------------EEAKLY-------GIQAFC 108
T+E K + D E + Q+L+ +E+ L+ G+Q F
Sbjct: 554 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 613
Query: 109 KDL--------LEVADVLEKATQCVP-KEEIKDDNPHL----KNLYEGLVMTEVQIQKVF 155
K L +E +D +E + KE I D L K L +G +++ IQK
Sbjct: 614 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 673
Query: 156 TKHGLLKL 163
T H +L+L
Sbjct: 674 TLHLVLRL 681
Score = 35.4 bits (80), Expect = 0.038
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 38/144 (26%)
Query: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLV------------------EEA 99
KTL + + LE + +T+E K + D E + Q+L+ +E+
Sbjct: 6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
Query: 100 KLY-------GIQAFCKDL--------LEVADVLEKA-TQCVPKEEIKDDNPHL----KN 139
L+ G+Q F K L +E +D +E + KE I D L K
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 125
Query: 140 LYEGLVMTEVQIQKVFTKHGLLKL 163
L +G +++ IQK T H +L+L
Sbjct: 126 LEDGRTLSDYNIQKESTLHLVLRL 149
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 37.4 bits (85), Expect = 0.010
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 30 ATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKV--------KLEEQLKETVEKYKRA 81
A+++ + LE+++ Q + D TE L++ V KLE+QLKE +RA
Sbjct: 211 ASREFRKKEKLEKELKQIQADMDSRQTEIKALQQYVQKSKEELQKLEQQLKEQKILNERA 270
Query: 82 LADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEE 129
+ E + R+ KL +E + + + C+ L + + +KA + KEE
Sbjct: 271 AKELEQFQMRNAKLQQENEQHSL--VCEQLSQ--ENQQKALELKAKEE 314
Score = 27.7 bits (60), Expect = 7.8
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 62 EEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDL 111
EE K +QL V K + +LA T +Q +++ EEA+ + I F +++
Sbjct: 156 EEVTKERDQLLSEVVKLRESLAQTTEQQQETERSKEEAE-HAISQFQQEI 204
>gi|11024714 ubiquitin B precursor [Homo sapiens]
Length = 229
Score = 37.0 bits (84), Expect = 0.013
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 46/188 (24%)
Query: 22 PSPRLLCTATKQKNSGQNLEEDMGQSEQ--------KADPPATEKTLLEEKVKLEEQLKE 73
P + L A KQ G+ L + Q E + KTL + + LE + +
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 97
Query: 74 TVEKYKRALADTENLRQRSQKLV------------------EEAKLY-------GIQAFC 108
T+E K + D E + Q+L+ +E+ L+ G+Q F
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 157
Query: 109 KDL--------LEVADVLEKATQCVP-KEEIKDDNPHL----KNLYEGLVMTEVQIQKVF 155
K L +E +D +E + KE I D L K L +G +++ IQK
Sbjct: 158 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
Query: 156 TKHGLLKL 163
T H +L+L
Sbjct: 218 TLHLVLRL 225
Score = 35.4 bits (80), Expect = 0.038
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 38/144 (26%)
Query: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLV------------------EEA 99
KTL + + LE + +T+E K + D E + Q+L+ +E+
Sbjct: 6 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
Query: 100 KLY-------GIQAFCKDL--------LEVADVLEKA-TQCVPKEEIKDDNPHL----KN 139
L+ G+Q F K L +E +D +E + KE I D L K
Sbjct: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 125
Query: 140 LYEGLVMTEVQIQKVFTKHGLLKL 163
L +G +++ IQK T H +L+L
Sbjct: 126 LEDGRTLSDYNIQKESTLHLVLRL 149
>gi|109134347 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 37.0 bits (84), Expect = 0.013
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 34 KNSGQNLEEDMGQSEQKADPPATEKTL--LEEKVKLEEQLKETVEKYKRALADTEN--LR 89
K +N +++ +A+ EK + LEEK KL E++ + EKY +A + +
Sbjct: 507 KQECRNFRSQAEKAQLEAEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAAIA 566
Query: 90 QRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDN 134
Q+ +K + E KL K L E +VLE KEE++ +N
Sbjct: 567 QKKRKSLHENKL-------KRLQEKVEVLE-----AKKEELETEN 599
>gi|109134355 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 37.0 bits (84), Expect = 0.013
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 34 KNSGQNLEEDMGQSEQKADPPATEKTL--LEEKVKLEEQLKETVEKYKRALADTEN--LR 89
K +N +++ +A+ EK + LEEK KL E++ + EKY +A + +
Sbjct: 507 KQECRNFRSQAEKAQLEAEKTLEEKQIQWLEEKHKLHERITDREEKYNQAKEKLQRAAIA 566
Query: 90 QRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDN 134
Q+ +K + E KL K L E +VLE KEE++ +N
Sbjct: 567 QKKRKSLHENKL-------KRLQEKVEVLE-----AKKEELETEN 599
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 36.2 bits (82), Expect = 0.022
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 30 ATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALADTENLR 89
A K+KN Q + D +E KA ++ E K K +E E ++ A+ + L
Sbjct: 425 ANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALA 484
Query: 90 QRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVMTEV 149
+ + L ++ +L A K +L D + K ++ I N H++N Y G+VM
Sbjct: 485 AKREDLEKKQQLLRA-ATGKAILNGIDSINKVLDHFRRKGI---NQHVQNGYHGIVMNNF 540
Query: 150 QIQKVF 155
+ + F
Sbjct: 541 ECEPAF 546
Score = 28.5 bits (62), Expect = 4.6
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 36/167 (21%)
Query: 31 TKQKNSGQNLEEDM-GQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALADTENLR 89
TK + ++L++++ G SEQ+ K LL+E+ KL E+ +E+ ++ LA+TE
Sbjct: 303 TKLELKAKDLQDELAGNSEQR-------KRLLKERQKLLEK----IEEKQKELAETE--- 348
Query: 90 QRSQKLVEEAKLYGIQAFCKDLLEVADVLEK---ATQCVPKEE---------------IK 131
V+E + GI + E D+ K +Q KEE I
Sbjct: 349 -PKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAIN 407
Query: 132 DDNPHLKNLYEGLVMTEVQIQKVFTKHGLL--KLNPVGAKFDPYEHE 176
D + +++ L TE +K ++ L LN V A+ + + +
Sbjct: 408 DKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRK 454
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 36.2 bits (82), Expect = 0.022
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 38 QNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETV----EKYKRALADTENLRQRSQ 93
+NLEE ++++ D + E+TL E+ +L+E L+ET+ EK + +L++ +
Sbjct: 1676 ENLEEMRSVTKERDDLRSVEETLKVERDQLKENLRETITRDLEKQEELKIVHMHLKEHQE 1735
Query: 94 KL-----VEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYE 142
+ + K I KDL D L KA +EE++ + HLK E
Sbjct: 1736 TIDKLRGIVSEKTNEISNMQKDLEHSNDAL-KAQDLKIQEELRIAHMHLKEQQE 1788
Score = 32.0 bits (71), Expect = 0.41
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 12 SLPALALSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQL 71
SL AL L + L T++ N E + EQ + +T +T+ EK + E+L
Sbjct: 860 SLGALKTELSYKTQELQEKTREVQERLNEMEQL--KEQLENRDSTLQTVEREKTLITEKL 917
Query: 72 KETVEKYKRALADTENLRQRSQKL 95
++T+E+ K + ++L+Q + L
Sbjct: 918 QQTLEEVKTLTQEKDDLKQLQESL 941
Score = 32.0 bits (71), Expect = 0.41
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 38 QNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKET-------VEKYKRALADTENLRQ 90
+NLEE +++ + E+TL E+ +L+E L+ET ++ K A ++ ++
Sbjct: 1879 ENLEEMKSVMKERDNLRRVEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKE 1938
Query: 91 RSQKLVEE--AKLYGIQAFCKDLLEVADVLEKATQCVPKEEIK 131
KL E+ K I KDL + D L+K Q + K+E++
Sbjct: 1939 TVDKLREKISEKTIQISDIQKDLDKSKDELQKKIQELQKKELQ 1981
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 35.8 bits (81), Expect = 0.029
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 38 QNLEEDMGQSEQKADPPATEKTLLEEKVK-LEEQLKETVEKYKRALADTENLRQRSQKLV 96
Q+ E++ +E++ + K LLE KVK L E+L+E E +A NL +
Sbjct: 896 QSETENLMDAEERCEGLIKSKILLEAKVKELTERLEEEEEMNSELVAKKRNLEDK----- 950
Query: 97 EEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKV 154
C L D LE V KE+ +N +KNL E + E I K+
Sbjct: 951 -----------CSSLKRDIDDLELTLTKVEKEKHATEN-KVKNLSEEMTALEENISKL 996
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 35.0 bits (79), Expect = 0.049
Identities = 27/124 (21%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 32 KQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALADTENLRQR 91
+Q+ Q EE MG+ E+K E+ + E++ K+ Q ++ E+ K+ E +R++
Sbjct: 401 EQEEMMQEQEEKMGEQEEKM--WEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQ 458
Query: 92 SQKLVEEAKLYGIQ--AFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVMTEV 149
+ + E+ + G Q C+ ++ + EK + +E+I++ ++ E + E
Sbjct: 459 EEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRR--QEEKIREQEKKIREQEEKIREQEE 516
Query: 150 QIQK 153
+Q+
Sbjct: 517 MMQE 520
Score = 30.4 bits (67), Expect = 1.2
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 32 KQKNSGQNLEEDMGQS-----EQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALADTE 86
+Q+ Q EE MG+ EQ+A E+ + ++ K+ EQ K+ E+ ++ E
Sbjct: 457 EQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEE 516
Query: 87 NLRQRSQKLVEE 98
++++ +K+ E+
Sbjct: 517 MMQEQEEKMWEQ 528
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 35.0 bits (79), Expect = 0.049
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 18/146 (12%)
Query: 32 KQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRAL--------- 82
K K Q E ++ + EQK EK LL+E+++ E +L E+ + L
Sbjct: 863 KTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEE 922
Query: 83 ------ADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPH 136
A E R Q+L E K Q DL E + E A Q + E++ +
Sbjct: 923 ILHEMEARLEEEEDRGQQLQAERKKMAQQML--DLEEQLEEEEAARQKLQLEKVTAE-AK 979
Query: 137 LKNLYEGLVMTEVQIQKVFTKHGLLK 162
+K L + +++ + Q K+ + LL+
Sbjct: 980 IKKLEDEILVMDDQNNKLSKERKLLE 1005
Score = 27.7 bits (60), Expect = 7.8
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 17 ALSLRPSPRLLCTATKQKNSGQNLEE----DMGQSEQKADPPATEKTLLEEKVKLEEQLK 72
AL L TAT+Q+ + +E E+ A + + ++ + E+L
Sbjct: 1150 ALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELT 1209
Query: 73 ETVEKYKRALADTENLRQRSQKLVEEAKLYG 103
E +E++KRA A+ + +Q +K E A L G
Sbjct: 1210 EQLEQFKRAKANLDKNKQTLEK--ENADLAG 1238
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 35.0 bits (79), Expect = 0.049
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 18/146 (12%)
Query: 32 KQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRAL--------- 82
K K Q E ++ + EQK EK LL+E+++ E +L E+ + L
Sbjct: 870 KTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEE 929
Query: 83 ------ADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPH 136
A E R Q+L E K Q DL E + E A Q + E++ +
Sbjct: 930 ILHEMEARLEEEEDRGQQLQAERKKMAQQML--DLEEQLEEEEAARQKLQLEKVTAE-AK 986
Query: 137 LKNLYEGLVMTEVQIQKVFTKHGLLK 162
+K L + +++ + Q K+ + LL+
Sbjct: 987 IKKLEDEILVMDDQNNKLSKERKLLE 1012
Score = 27.7 bits (60), Expect = 7.8
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 17 ALSLRPSPRLLCTATKQKNSGQNLEE----DMGQSEQKADPPATEKTLLEEKVKLEEQLK 72
AL L TAT+Q+ + +E E+ A + + ++ + E+L
Sbjct: 1157 ALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELT 1216
Query: 73 ETVEKYKRALADTENLRQRSQKLVEEAKLYG 103
E +E++KRA A+ + +Q +K E A L G
Sbjct: 1217 EQLEQFKRAKANLDKNKQTLEK--ENADLAG 1245
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 35.0 bits (79), Expect = 0.049
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 18/146 (12%)
Query: 32 KQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRAL--------- 82
K K Q E ++ + EQK EK LL+E+++ E +L E+ + L
Sbjct: 870 KTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEE 929
Query: 83 ------ADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPH 136
A E R Q+L E K Q DL E + E A Q + E++ +
Sbjct: 930 ILHEMEARLEEEEDRGQQLQAERKKMAQQML--DLEEQLEEEEAARQKLQLEKVTAE-AK 986
Query: 137 LKNLYEGLVMTEVQIQKVFTKHGLLK 162
+K L + +++ + Q K+ + LL+
Sbjct: 987 IKKLEDEILVMDDQNNKLSKERKLLE 1012
Score = 27.7 bits (60), Expect = 7.8
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 17 ALSLRPSPRLLCTATKQKNSGQNLEE----DMGQSEQKADPPATEKTLLEEKVKLEEQLK 72
AL L TAT+Q+ + +E E+ A + + ++ + E+L
Sbjct: 1157 ALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELT 1216
Query: 73 ETVEKYKRALADTENLRQRSQKLVEEAKLYG 103
E +E++KRA A+ + +Q +K E A L G
Sbjct: 1217 EQLEQFKRAKANLDKNKQTLEK--ENADLAG 1245
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 35.0 bits (79), Expect = 0.049
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 18/146 (12%)
Query: 32 KQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRAL--------- 82
K K Q E ++ + EQK EK LL+E+++ E +L E+ + L
Sbjct: 863 KTKERQQKAENELKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEE 922
Query: 83 ------ADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPH 136
A E R Q+L E K Q DL E + E A Q + E++ +
Sbjct: 923 ILHEMEARLEEEEDRGQQLQAERKKMAQQML--DLEEQLEEEEAARQKLQLEKVTAE-AK 979
Query: 137 LKNLYEGLVMTEVQIQKVFTKHGLLK 162
+K L + +++ + Q K+ + LL+
Sbjct: 980 IKKLEDEILVMDDQNNKLSKERKLLE 1005
Score = 27.7 bits (60), Expect = 7.8
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 17 ALSLRPSPRLLCTATKQKNSGQNLEE----DMGQSEQKADPPATEKTLLEEKVKLEEQLK 72
AL L TAT+Q+ + +E E+ A + + ++ + E+L
Sbjct: 1150 ALKTELEDTLDSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELT 1209
Query: 73 ETVEKYKRALADTENLRQRSQKLVEEAKLYG 103
E +E++KRA A+ + +Q +K E A L G
Sbjct: 1210 EQLEQFKRAKANLDKNKQTLEK--ENADLAG 1238
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 34.7 bits (78), Expect = 0.064
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 24/124 (19%)
Query: 45 GQSEQKADPPATEKTLL--------------EEKVKLEEQLKETVEKYKRALADTENLRQ 90
G+ EQK +TEK +L EEK KLEE+LK T ++Y +L + ++
Sbjct: 442 GEFEQKL--ASTEKEVLQLNEFLKQRLSLFSEEKKKLEEKLK-TRDRYISSL-KKKCQKE 497
Query: 91 RSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVMTEVQ 150
Q ++ ++ ++ + DL + DV ++ Q EE KNL E L+ TE +
Sbjct: 498 SEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILEEKN------KNLQEALIDTEKK 551
Query: 151 IQKV 154
++++
Sbjct: 552 LEEI 555
>gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens]
Length = 1280
Score = 34.3 bits (77), Expect = 0.084
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 29 TATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLK---ETVEKYKRALADT 85
TA N+GQ EED+ ++EQ D + +E KL+E+L+ +E+Y+R L
Sbjct: 1100 TAAWVLNNGQ-YEEDVEETEQNLDEAKHAEKYEQEITKLKERLRVSSRRLEEYERRLLVQ 1158
Query: 86 ENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLV 145
E Q+ QKL LLE LE + + + +++ + D+ +K++ L+
Sbjct: 1159 E---QQMQKL---------------LLEYKARLEDSEERLRRQQEEKDS-QMKSIISRLM 1199
Query: 146 MTEVQIQK 153
E +++K
Sbjct: 1200 AVEEELKK 1207
>gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens]
Length = 1139
Score = 34.3 bits (77), Expect = 0.084
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 23/128 (17%)
Query: 29 TATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLK---ETVEKYKRALADT 85
TA N+GQ EED+ ++EQ D + +E KL+E+L+ +E+Y+R L
Sbjct: 959 TAAWVLNNGQ-YEEDVEETEQNLDEAKHAEKYEQEITKLKERLRVSSRRLEEYERRLLVQ 1017
Query: 86 ENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLV 145
E Q+ QKL LLE LE + + + +++ + D+ +K++ L+
Sbjct: 1018 E---QQMQKL---------------LLEYKARLEDSEERLRRQQEEKDS-QMKSIISRLM 1058
Query: 146 MTEVQIQK 153
E +++K
Sbjct: 1059 AVEEELKK 1066
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 34.3 bits (77), Expect = 0.084
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 27 LCTATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALADTE 86
L T ++KN Q + +SE D L++ K +LE ++KE E+ +
Sbjct: 878 LVTLVQEKNDLQL--QVQAESENLLDAEERCDQLIKAKFQLEAKIKEVTERAEDEEEINA 935
Query: 87 NLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVM 146
L + +KL +E C +L + D LE V KE+ +N +KNL E L
Sbjct: 936 ELTAKKRKLEDE---------CSELKKDIDDLELTLAKVEKEKHATEN-KVKNLTEELSG 985
Query: 147 TEVQIQKV 154
+ I K+
Sbjct: 986 LDETIAKL 993
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 34.3 bits (77), Expect = 0.084
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 62 EEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKA 121
EEK KL++ +KE Y+ ALA++E + + L EE ++ F D E L+++
Sbjct: 1831 EEKEKLQKNMKELKVHYETALAESEKKMKLTHSLQEE-----LEKFDADYTEFEHWLQQS 1885
Query: 122 TQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTK 157
Q + E D+ GL MT+++ QK F++
Sbjct: 1886 EQELENLEAGADD------INGL-MTKLKRQKSFSE 1914
Score = 29.6 bits (65), Expect = 2.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADV 117
K L EE+ LEE+ KE VEK K N+ K +++A+ G F K + ++
Sbjct: 1455 KRLEEEEKSLEEEKKEHVEKAKELQKWVSNI----SKTLKDAEKAGKPPFSKQKISSEEI 1510
Query: 118 LEKATQ 123
K Q
Sbjct: 1511 STKKEQ 1516
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 34.3 bits (77), Expect = 0.084
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 62 EEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKA 121
EEK KL++ +KE Y+ ALA++E + + L EE ++ F D E L+++
Sbjct: 1842 EEKEKLQKNMKELKVHYETALAESEKKMKLTHSLQEE-----LEKFDADYTEFEHWLQQS 1896
Query: 122 TQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTK 157
Q + E D+ GL MT+++ QK F++
Sbjct: 1897 EQELENLEAGADD------INGL-MTKLKRQKSFSE 1925
Score = 29.6 bits (65), Expect = 2.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADV 117
K L EE+ LEE+ KE VEK K N+ K +++A+ G F K + ++
Sbjct: 1466 KRLEEEEKSLEEEKKEHVEKAKELQKWVSNI----SKTLKDAEKAGKPPFSKQKISSEEI 1521
Query: 118 LEKATQ 123
K Q
Sbjct: 1522 STKKEQ 1527
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 34.3 bits (77), Expect = 0.084
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 62 EEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKA 121
EEK KL++ +KE Y+ ALA++E + + L EE ++ F D E L+++
Sbjct: 1980 EEKEKLQKNMKELKVHYETALAESEKKMKLTHSLQEE-----LEKFDADYTEFEHWLQQS 2034
Query: 122 TQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTK 157
Q + E D+ GL MT+++ QK F++
Sbjct: 2035 EQELENLEAGADD------INGL-MTKLKRQKSFSE 2063
Score = 29.6 bits (65), Expect = 2.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADV 117
K L EE+ LEE+ KE VEK K N+ K +++A+ G F K + ++
Sbjct: 1604 KRLEEEEKSLEEEKKEHVEKAKELQKWVSNI----SKTLKDAEKAGKPPFSKQKISSEEI 1659
Query: 118 LEKATQ 123
K Q
Sbjct: 1660 STKKEQ 1665
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 34.3 bits (77), Expect = 0.084
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 62 EEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKA 121
EEK KL++ +KE Y+ ALA++E + + L EE ++ F D E L+++
Sbjct: 1802 EEKEKLQKNMKELKVHYETALAESEKKMKLTHSLQEE-----LEKFDADYTEFEHWLQQS 1856
Query: 122 TQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTK 157
Q + E D+ GL MT+++ QK F++
Sbjct: 1857 EQELENLEAGADD------INGL-MTKLKRQKSFSE 1885
Score = 29.6 bits (65), Expect = 2.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADV 117
K L EE+ LEE+ KE VEK K N+ K +++A+ G F K + ++
Sbjct: 1426 KRLEEEEKSLEEEKKEHVEKAKELQKWVSNI----SKTLKDAEKAGKPPFSKQKISSEEI 1481
Query: 118 LEKATQ 123
K Q
Sbjct: 1482 STKKEQ 1487
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 34.3 bits (77), Expect = 0.084
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 62 EEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKA 121
EEK KL++ +KE Y+ ALA++E + + L EE ++ F D E L+++
Sbjct: 1476 EEKEKLQKNMKELKVHYETALAESEKKMKLTHSLQEE-----LEKFDADYTEFEHWLQQS 1530
Query: 122 TQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTK 157
Q + E D+ GL MT+++ QK F++
Sbjct: 1531 EQELENLEAGADD------INGL-MTKLKRQKSFSE 1559
Score = 29.6 bits (65), Expect = 2.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 58 KTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADV 117
K L EE+ LEE+ KE VEK K N+ K +++A+ G F K + ++
Sbjct: 1100 KRLEEEEKSLEEEKKEHVEKAKELQKWVSNI----SKTLKDAEKAGKPPFSKQKISSEEI 1155
Query: 118 LEKATQ 123
K Q
Sbjct: 1156 STKKEQ 1161
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 33.9 bits (76), Expect = 0.11
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 66 KLEEQLKETVEKYKRALADTENLRQRSQKL 95
+LE+QLK +E+ + ALA+ E LRQR ++L
Sbjct: 175 ELEQQLKRALEELQEALAEKEELRQRCEEL 204
Score = 32.7 bits (73), Expect = 0.24
Identities = 27/118 (22%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 38 QNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALAD--TENLRQRSQKL 95
+ L+E + Q +K + TE+ L +E+++ +L++ +E +++L + +++ + S KL
Sbjct: 490 EELQEQLEQKHRKMNELETEQRLSKERIR---ELQQQIEDLQKSLQEQGSKSEGESSSKL 546
Query: 96 VEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQK 153
++ ++A + L EV + L+K +E I+D P + + + E +QK
Sbjct: 547 KQK-----LEAHMEKLTEVHEELQK-----KQELIEDLQPDINQNVQKINELEAALQK 594
Score = 30.4 bits (67), Expect = 1.2
Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 11/140 (7%)
Query: 34 KNSGQNLEEDMGQSEQKADPPATEKTLLEEK-----------VKLEEQLKETVEKYKRAL 82
K Q+L + ++AD A E LEEK ++ + LKET E+ + +
Sbjct: 375 KRQVQDLHVKLSSESKRADTLAFEMKRLEEKHEALLKEKERLIEQRDTLKETNEELRCSQ 434
Query: 83 ADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYE 142
++L Q + + + + EV L+ + + ++ +N ++ L E
Sbjct: 435 VQQDHLNQTDASATKSYENLAAEIMPVEYREVFIRLQHENKMLRLQQEGSENERIEELQE 494
Query: 143 GLVMTEVQIQKVFTKHGLLK 162
L ++ ++ T+ L K
Sbjct: 495 QLEQKHRKMNELETEQRLSK 514
>gi|111548652 hypothetical protein LOC51057 isoform 2 [Homo sapiens]
Length = 746
Score = 33.9 bits (76), Expect = 0.11
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 34 KNSGQNLEEDMG--QSEQKADPPATEKTLLEEKVKLEEQ-------LKETVEKYKRALAD 84
KN+ + D+G Q K DPPATE LE+K KL E EK + +L +
Sbjct: 47 KNTLHIADRDIGIYQYYDKKDPPATEHGNLEKKQKLAESRDYPWTLKNRRPEKLRDSLKE 106
Query: 85 TENLRQRSQKLVEEAK 100
E L Q S+ ++ + K
Sbjct: 107 LEELMQNSRCVLSKWK 122
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 33.9 bits (76), Expect = 0.11
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 29 TATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALAD-TEN 87
T K K + +EE+ + E+ + T K LEE+ KLE +L E VE KR + + +
Sbjct: 417 TEAKIKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE 476
Query: 88 LRQRSQKL 95
L Q ++L
Sbjct: 477 LNQVMEQL 484
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 33.9 bits (76), Expect = 0.11
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 10 RRSLPALALSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTLLEEKVKLEE 69
RR SL P + K ++S ++ E++ G + KA P + E+ L K K EE
Sbjct: 98 RRDKDRKRSSLSPGRGKDFKSRKDRDSKKDEEDEHGDKKPKAQPLSLEELL--AKKKAEE 155
Query: 70 QLKETVEKYKRALADTENLRQRSQKLVEEAKL 101
+ + + +A + E L++R Q++ E ++
Sbjct: 156 EAEAKPKFLSKAEREAEALKRRQQEVEERQRM 187
>gi|55741447 pleckstrin homology domain containing, family H (with
MyTH4 domain) member 1 [Homo sapiens]
Length = 1364
Score = 33.9 bits (76), Expect = 0.11
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 38 QNLEEDMGQSEQKADPPATEKTLLEEKVKL--------EEQLKETVEKYKRALADTENLR 89
Q LE+ + ++EQ+A+ T+ ++EEKVKL E L ++ +A+ + L
Sbjct: 44 QELEQRLLEAEQRAENAETQVGVMEEKVKLSNLKNVDSEGSLHRKYQELLKAIKGKDELI 103
Query: 90 QRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLV 145
+ + +E+ K + + A + E T + K E+ +N HLK+ + LV
Sbjct: 104 SQLEAQLEKQKQMRAEEAKTVQEKAAKIKEWVTLKLAKLEM--ENQHLKSHNQRLV 157
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 33.5 bits (75), Expect = 0.14
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 41 EEDMGQSEQKADPPATEKTLLEEKVKLEEQLKETVEKYKRALADTENLRQRSQKLVEEAK 100
E+ + + + + L+ EK++L+EQL+ E A+ E LR R AK
Sbjct: 859 EKQLAAENRLTEMETLQSQLMAEKLQLQEQLQAETE----LCAEAEELRARL-----TAK 909
Query: 101 LYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVMTE-----VQIQKVF 155
++ C DL + E+ Q + E+ K +++ L E L E +Q++KV
Sbjct: 910 KQELEEICHDLEARVEEEEERCQHLQAEK-KKMQQNIQELEEQLEEEESARQKLQLEKVT 968
Query: 156 TKHGLLKL 163
T+ L KL
Sbjct: 969 TEAKLKKL 976
Score = 31.2 bits (69), Expect = 0.71
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 25 RLLCTATKQKNSG--QNLEEDMGQSEQKADPPATEKTLLEEKV-KLEEQLKETVEKYKRA 81
R TA KQ+ +LE + + E++ EK +++ + +LEEQL+E ++
Sbjct: 903 RARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKL 962
Query: 82 LADTENLRQRSQKLVEEAKLYGIQ----AFCKDLLEVADVLEKATQCVPKEEIKDDNPHL 137
+ + +KL EE + Q A K LLE + E T +EE L
Sbjct: 963 QLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLE-DRIAEFTTNLTEEEEKSKSLAKL 1021
Query: 138 KNLYEGLV 145
KN +E ++
Sbjct: 1022 KNKHEAMI 1029
Score = 28.1 bits (61), Expect = 6.0
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 32 KQKNSGQNLEEDMGQSE--------QKADPPATEKTLLEEKVKLEEQLKETVEKYKRALA 83
K + + Q LEE + + E +K A K L EE++ LE+Q + K K+ L
Sbjct: 940 KMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQIILEDQ-NCKLAKEKKLLE 998
Query: 84 D-----TENLRQRSQKLVEEAKLYG-IQAFCKDLLEVADVLEKATQCVPKEEIK 131
D T NL + +K AKL +A DL E EK Q + K K
Sbjct: 999 DRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRK 1052
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,178,679
Number of Sequences: 37866
Number of extensions: 360386
Number of successful extensions: 2804
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 2188
Number of HSP's gapped (non-prelim): 841
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.