UBC 34720

Name: UBC	Sequence: fasta or formatted (685aa)		NCBI GI: 67191208
Description: ubiquitin C		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.6 18 1 C cysteine 0.0 0 0 D aspartate 6.6 45 1 E glutamate 7.9 54 1 F phenylalanine 2.6 18 1 G glycine 7.9 54 2 H histidine 1.3 9 1 I isoleucine 9.2 63 1 K lysine 9.2 63 1 L leucine 11.8 81 1 M methionine 1.3 9 1 N asparagine 2.6 18 1 P proline 3.8 26 2 Q glutamine 7.9 54 2 R arginine 5.3 36 1 S serine 4.1 28 1 T threonine 9.2 63 1 V valine 5.4 37 1 W tryptophan 0.0 0 0 Y tyrosine 1.3 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin C UBB 0.322 ubiquitin B precursor UBA52 0.098 ubiquitin and ribosomal protein L40 precursor UBA52 0.098 ubiquitin and ribosomal protein L40 precursor RPS27A 0.097 ubiquitin and ribosomal protein S27a precursor [Hom... RPS27A 0.097 ubiquitin and ribosomal protein S27a precursor LOC100128355 0.084 PREDICTED: similar to hCG1790904 LOC100128355 0.084 PREDICTED: similar to hCG1790904 LOC100128355 0.084 PREDICTED: similar to hCG1790904 NEDD8 0.055 neural precursor cell expressed, developmentally down... UBD 0.045 ubiquitin D ISG15 0.041 ISG15 ubiquitin-like modifier OASL 0.037 2'-5'-oligoadenylate synthetase-like isoform a [Homo... ANUBL1 0.037 AN1, ubiquitin-like, homolog ANUBL1 0.037 AN1, ubiquitin-like, homolog UBL4A 0.029 ubiquitin-like 4 RAD23B 0.021 UV excision repair protein RAD23 homolog B PARK2 0.020 parkin isoform 2 PARK2 0.020 parkin isoform 1 UHRF1 0.020 ubiquitin-like with PHD and ring finger domains 1 i... UHRF1 0.020 ubiquitin-like with PHD and ring finger domains 1 i... FAU 0.019 ubiquitin-like protein fubi and ribosomal protein S30... UHRF2 0.018 ubiquitin-like with PHD and ring finger domains 2 [H... BAT3 0.018 HLA-B associated transcript-3 isoform b BAT3 0.018 HLA-B associated transcript-3 isoform b BAT3 0.018 HLA-B associated transcript-3 isoform b BAT3 0.018 HLA-B associated transcript-3 isoform a SF3A1 0.018 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... SF3A1 0.018 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... UBL4B 0.018 ubiquitin-like 4B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.