Search of human proteins with 24308245

Search of human proteins with 24308245

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24308245 RecQ-mediated genome instability protein 2 [Homo
sapiens]
         (147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24308245 RecQ-mediated genome instability protein 2 [Homo sap...   302   8e-83
gi|239752797 PREDICTED: hypothetical protein [Homo sapiens]            33   0.086
gi|239747322 PREDICTED: hypothetical protein XP_002346421 [Homo ...    33   0.086
gi|239741144 PREDICTED: hypothetical protein XP_002342119 [Homo ...    33   0.086
gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens]             30   0.72 
gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens]                  30   0.72 
gi|89886480 zinedin isoform 2 [Homo sapiens]                           30   0.95 
gi|89886477 zinedin isoform 1 [Homo sapiens]                           30   0.95 
gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]            29   1.2  
gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo sapi...    29   1.2  
gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo sapi...    29   1.2  
gi|199560355 hypothetical protein LOC283643 isoform 1 [Homo sapi...    29   1.2  
gi|153251865 hypothetical protein LOC84226 [Homo sapiens]              29   1.6  
gi|122937249 glutamate receptor interacting protein 2 [Homo sapi...    28   2.1  
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ...    28   2.8  
gi|145386517 phostensin [Homo sapiens]                                 28   3.6  
gi|199559805 phostensin [Homo sapiens]                                 28   3.6  
gi|69122971 1-acylglycerol-3-phosphate O-acyltransferase 2 isofo...    28   3.6  
gi|6041665 1-acylglycerol-3-phosphate O-acyltransferase 2 isofor...    28   3.6  
gi|38708313 aspartate beta-hydroxylase domain containing 1 [Homo...    28   3.6  
gi|142976757 immediate early response 5 [Homo sapiens]                 27   4.7  
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]            27   4.7  
gi|195546915 hypothetical protein LOC125704 [Homo sapiens]             27   4.7  
gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like...    27   6.1  
gi|115511036 alpha-kinase 3 [Homo sapiens]                             27   6.1  
gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo...    27   6.1  
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]            27   8.0  
gi|239752453 PREDICTED: hypothetical protein XP_002348279 [Homo ...    27   8.0  
gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo ...    27   8.0  
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ...    27   8.0  

>gi|24308245 RecQ-mediated genome instability protein 2 [Homo
           sapiens]
          Length = 147

 Score =  302 bits (773), Expect = 8e-83
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MAAAADSFSGGPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWM 60
           MAAAADSFSGGPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWM
Sbjct: 1   MAAAADSFSGGPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWM 60

Query: 61  QGRVVMADRGEARLRDPSGDFSVRGLERVPRGRPCLVPGKYVMVMGVVQACSPEPCLQAV 120
           QGRVVMADRGEARLRDPSGDFSVRGLERVPRGRPCLVPGKYVMVMGVVQACSPEPCLQAV
Sbjct: 61  QGRVVMADRGEARLRDPSGDFSVRGLERVPRGRPCLVPGKYVMVMGVVQACSPEPCLQAV 120

Query: 121 KMTDLSDNPIHESMWELEVEDLHRNIP 147
           KMTDLSDNPIHESMWELEVEDLHRNIP
Sbjct: 121 KMTDLSDNPIHESMWELEVEDLHRNIP 147


>gi|239752797 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 347

 Score = 33.1 bits (74), Expect = 0.086
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 9   SGGPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMAD 68
           +GGP GV+LPR     + A    + AEG PGA R   A    GP       +  RV    
Sbjct: 172 AGGPVGVQLPREVGGTLGAAAQAKGAEGCPGAQRPFHAQDHPGP-------VPARVGCGP 224

Query: 69  RGEARLR 75
            GE ++R
Sbjct: 225 LGEEQIR 231


>gi|239747322 PREDICTED: hypothetical protein XP_002346421 [Homo
           sapiens]
          Length = 347

 Score = 33.1 bits (74), Expect = 0.086
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 9   SGGPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMAD 68
           +GGP GV+LPR     + A    + AEG PGA R   A    GP       +  RV    
Sbjct: 172 AGGPVGVQLPREVGGTLGAAAQAKGAEGCPGAQRPFHAQDHPGP-------VPARVGCGP 224

Query: 69  RGEARLR 75
            GE ++R
Sbjct: 225 LGEEQIR 231


>gi|239741144 PREDICTED: hypothetical protein XP_002342119 [Homo
           sapiens]
          Length = 347

 Score = 33.1 bits (74), Expect = 0.086
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 9   SGGPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMAD 68
           +GGP GV+LPR     + A    + AEG PGA R   A    GP       +  RV    
Sbjct: 172 AGGPVGVQLPREVGGTLGAAAQAKGAEGCPGAQRPFHAQDHPGP-------VPARVGCGP 224

Query: 69  RGEARLR 75
            GE ++R
Sbjct: 225 LGEEQIR 231


>gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens]
          Length = 812

 Score = 30.0 bits (66), Expect = 0.72
 Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 11/114 (9%)

Query: 12  PAGVRLPRSP--PLKVLAEQLRR------DAEGGPGAWRLSRAAAGRGPLDLAAVWMQGR 63
           PAG R  + P  P + + + L+        A G  G    S    G G  ++  +W Q  
Sbjct: 178 PAGSRWEQQPHCPNEAVTQGLKHLRHLLSAAVGSLGLAMTSGPGVGAGAAEVRVLWHQPW 237

Query: 64  VVMADRGEARLRDPSGDFSVRGLERVPRGRPCLVPGKYVMVMGVVQACSPEPCL 117
            +   R  A   +    + +   E  P G P ++P  + +VM V  + SP+PCL
Sbjct: 238 ALQGPRTCAEPTEKGAHYRL-SWEDTP-GSPKVLP-LFSVVMTVASSGSPQPCL 288


>gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens]
          Length = 689

 Score = 30.0 bits (66), Expect = 0.72
 Identities = 29/84 (34%), Positives = 33/84 (39%), Gaps = 15/84 (17%)

Query: 9   SGGPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSR----AAAGRGPLDLAAVWMQGRV 64
           SGG  G  +P  P  +  + +LR   E GPG    S     AA GR     AA    G  
Sbjct: 24  SGGGGGPTVP--PHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGPQ 81

Query: 65  VMADRG---------EARLRDPSG 79
               RG         EARL DP G
Sbjct: 82  AQQHRGGGPQAQSHGEARLSDPPG 105


>gi|89886480 zinedin isoform 2 [Homo sapiens]
          Length = 760

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 11  GPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGP 52
           GPAG+    S  +K + EQ++R+A G  G  RL  +  G+ P
Sbjct: 225 GPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIP 266


>gi|89886477 zinedin isoform 1 [Homo sapiens]
          Length = 753

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 11  GPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGP 52
           GPAG+    S  +K + EQ++R+A G  G  RL  +  G+ P
Sbjct: 225 GPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIP 266


>gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 182

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 12 PAGVRLPRSPPLKVLAEQLR--RDAEGGPGAWR--LSRAAAGRGPLDLAAVWMQG 62
          PAG R    P  +V  EQ      A GG G+    L  A  G    D A +WMQG
Sbjct: 28 PAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGVGVSASDEAGIWMQG 82


>gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo
           sapiens]
          Length = 352

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 23  LKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEARL---RDPSG 79
           L+ L E+LR  AE    AW       GRGP   AA       V  + G  +    RD  G
Sbjct: 222 LQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERD-GG 280

Query: 80  DFSVRGLERVPRGRPCLVPGKYVMVMGVVQAC-SPEPCLQAV 120
                G  R+ R        + +    V++   S E CL+AV
Sbjct: 281 PAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAV 322


>gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo
           sapiens]
          Length = 393

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 23  LKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEARL---RDPSG 79
           L+ L E+LR  AE    AW       GRGP   AA       V  + G  +    RD  G
Sbjct: 263 LQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERD-GG 321

Query: 80  DFSVRGLERVPRGRPCLVPGKYVMVMGVVQAC-SPEPCLQAV 120
                G  R+ R        + +    V++   S E CL+AV
Sbjct: 322 PAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAV 363


>gi|199560355 hypothetical protein LOC283643 isoform 1 [Homo
           sapiens]
          Length = 426

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 23  LKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEARL---RDPSG 79
           L+ L E+LR  AE    AW       GRGP   AA       V  + G  +    RD  G
Sbjct: 296 LQALEEELREAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELGALQQCWERD-GG 354

Query: 80  DFSVRGLERVPRGRPCLVPGKYVMVMGVVQAC-SPEPCLQAV 120
                G  R+ R        + +    V++   S E CL+AV
Sbjct: 355 PAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAV 396


>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
          Length = 1984

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 7/68 (10%)

Query: 77  PSGDFSVRGLERVPRGRPCLVPGKYVMVMGVVQACSPE-----PCLQAVKMTDLSDNPIH 131
           P   F +     +PR  P +V  +Y+ +   +Q   P      PCLQ VK T L   P H
Sbjct: 517 PGPPFQIVKSVTIPRPTPQMV--EYIELTPKLQYVRPSEHHTGPCLQDVKSTKLITKPKH 574

Query: 132 ESMWELEV 139
           + +  +E+
Sbjct: 575 QILETVEL 582


>gi|122937249 glutamate receptor interacting protein 2 [Homo
           sapiens]
          Length = 1141

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 5/63 (7%)

Query: 5   ADSFSGG-PAGVRLPRSPPLKVLAEQLRRDAE----GGPGAWRLSRAAAGRGPLDLAAVW 59
           AD+  GG PA    P  P +    E     A     GGPG++    AA G  P +    W
Sbjct: 859 ADALKGGLPAARFSPAVPSVDSAVESWDSSATEGGFGGPGSYTPQAAARGTTPQERRPGW 918

Query: 60  MQG 62
           ++G
Sbjct: 919 LRG 921


>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
            sapiens]
          Length = 3258

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 77   PSGDF--SVRGLERVPRGRPCLVPGKYVMVMGVVQACSPEPCLQAVKMTDLSDNPIHESM 134
            PS D   SV  +E  P   P   P   +   G +Q CSP P     +  +  D P+  S 
Sbjct: 3102 PSADQKRSVTFIEAQPE--PAAAPTDALPATGQLQGCSPAPS----RKPEAMDEPVLTSS 3155

Query: 135  WELEVEDLHRNIP 147
              + V DLH   P
Sbjct: 3156 PAIVVADLHSVSP 3168


>gi|145386517 phostensin [Homo sapiens]
          Length = 613

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 84  RGLERVPRGRPCLVPGKYVMVMGVVQACSPEPCLQAVKMTDLSDNPIHES 133
           RGL    R +  L PG+   V+G V+A  P+P   AV +  +   P+H++
Sbjct: 41  RGLLERRRAKLGLSPGEPSPVLGTVEAGPPDPDESAVLLEAI--GPVHQN 88


>gi|199559805 phostensin [Homo sapiens]
          Length = 613

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 84  RGLERVPRGRPCLVPGKYVMVMGVVQACSPEPCLQAVKMTDLSDNPIHES 133
           RGL    R +  L PG+   V+G V+A  P+P   AV +  +   P+H++
Sbjct: 41  RGLLERRRAKLGLSPGEPSPVLGTVEAGPPDPDESAVLLEAI--GPVHQN 88


>gi|69122971 1-acylglycerol-3-phosphate O-acyltransferase 2 isoform
           b [Homo sapiens]
          Length = 246

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 81  FSVRGLERVPRGRPCLVPGKYVMV---MGVVQACSPEPCLQAVKMTDLSDNPI 130
           F VR   R+   RPC++   +  +   MG+++   PE C+Q  K   L   P+
Sbjct: 78  FEVRDPRRLQEARPCVIVSNHQSILDMMGLMEVL-PERCVQIAKRELLFLGPV 129


>gi|6041665 1-acylglycerol-3-phosphate O-acyltransferase 2 isoform a
           [Homo sapiens]
          Length = 278

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 81  FSVRGLERVPRGRPCLVPGKYVMV---MGVVQACSPEPCLQAVKMTDLSDNPI 130
           F VR   R+   RPC++   +  +   MG+++   PE C+Q  K   L   P+
Sbjct: 78  FEVRDPRRLQEARPCVIVSNHQSILDMMGLMEVL-PERCVQIAKRELLFLGPV 129


>gi|38708313 aspartate beta-hydroxylase domain containing 1 [Homo
           sapiens]
          Length = 390

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 36/113 (31%)

Query: 29  QLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEAR--------------- 73
           ++RR A+GGPG         GRGP  +  +   G + + D   A                
Sbjct: 164 RVRRAAQGGPG--------PGRGP-GVLGIQRPGLLFLPDLPSAPFVPRDAQRHDVELLE 214

Query: 74  ------LRD---PSGDFSVRGLERVPRG-RPCLVPGKYVMVMGVVQACSPEPC 116
                 LRD    S DFS  G    PRG  P L PG Y +++     C P  C
Sbjct: 215 SSFPAILRDFGAVSWDFS--GTTPPPRGWSPPLAPGCYQLLLYQAGRCQPSNC 265


>gi|142976757 immediate early response 5 [Homo sapiens]
          Length = 327

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 5   ADSFSGGPAGVRLPRSPPLKVLAEQLRRDAEGG 37
           A    GGPAG   P S PLK     L +   GG
Sbjct: 221 AAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGG 253


>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query: 14 GVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPL 53
          G   P+  P   L+          P AW+LSR   GR PL
Sbjct: 18 GAAPPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPL 57


>gi|195546915 hypothetical protein LOC125704 [Homo sapiens]
          Length = 419

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 13/31 (41%), Positives = 14/31 (45%)

Query: 37 GPGAWRLSRAAAGRGPLDLAAVWMQGRVVMA 67
          GP  W   R   GRG L   A W  G V+ A
Sbjct: 9  GPAGWCRRRGRCGRGTLLAFAAWTAGWVLAA 39


>gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like
           domains 1 [Homo sapiens]
          Length = 1138

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 29  QLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEARLR 75
           QL R  EGG GAW          P  L   W++G  V    G  RLR
Sbjct: 520 QLSRPGEGGEGAWGPPTLMTTDCPEPLLQPWLEGWHV---EGTDRLR 563


>gi|115511036 alpha-kinase 3 [Homo sapiens]
          Length = 1907

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 5/47 (10%)

Query: 11  GPAGVRLPRSPPLKVLAEQLRRDAEG-----GPGAWRLSRAAAGRGP 52
           G   V   R P +   A Q R  A       G GAWR   AAA  GP
Sbjct: 149 GQQQVTTARPPAINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGP 195


>gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo
           sapiens]
          Length = 623

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 26/91 (28%)

Query: 45  RAAAGRGPLDLAAVWMQGRVVMADRGEARLRDPSGDFSVRG----------------LER 88
           R  AGR  L  AA+   G     +R  +R + PSGD   RG                L R
Sbjct: 288 RLRAGRAHLLAAALGPAG-----ERAGSRPQSPSGDADARGDAAVYCFHAAAGEWRELTR 342

Query: 89  VPRGRPCLVPG-----KYVMVMGVVQACSPE 114
           +P G P    G      Y+ V G V    P+
Sbjct: 343 LPEGAPARGCGLCVLYNYLFVAGGVAPAGPD 373


>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 296

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 18/46 (39%), Positives = 22/46 (47%)

Query: 12  PAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAA 57
           P G R   +P  +  A    R+ E   GA  + RA A  GP DLAA
Sbjct: 135 PGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180


>gi|239752453 PREDICTED: hypothetical protein XP_002348279 [Homo
          sapiens]
          Length = 103

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 7  SFSGGPAGVRLPRSPPLKVLAEQLRRDAEG-----GPGAWRLSRAAAGRGPLDLAAVW 59
          S SG P G+RLP S     L  QL +   G       GA   SR  A  GP DL A W
Sbjct: 9  SLSGTPHGLRLPHSWAQTWLVGQLGKLFSGHSLPDARGASIGSRIPAEPGP-DLGASW 65


>gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo
           sapiens]
          Length = 326

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 13/28 (46%), Positives = 13/28 (46%)

Query: 25  VLAEQLRRDAEGGPGAWRLSRAAAGRGP 52
           VLAE  R  A   P AWR     AG  P
Sbjct: 276 VLAEPSREQAHAAPPAWRTRVPGAGPAP 303


>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
           sapiens]
          Length = 296

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 18/46 (39%), Positives = 22/46 (47%)

Query: 12  PAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAA 57
           P G R   +P  +  A    R+ E   GA  + RA A  GP DLAA
Sbjct: 135 PGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGPEDLAA 180


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,799,242
Number of Sequences: 37866
Number of extensions: 330295
Number of successful extensions: 1000
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 982
Number of HSP's gapped (non-prelim): 36
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.