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Search of human proteins with 24308065
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308065 netrin 5 [Homo sapiens]
(489 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308065 netrin 5 [Homo sapiens] 1070 0.0
gi|148613884 netrin 1 [Homo sapiens] 387 e-108
gi|5453810 netrin 3 [Homo sapiens] 377 e-104
gi|119703755 laminin, beta 2 precursor [Homo sapiens] 175 7e-44
gi|110611156 laminin, gamma 3 precursor [Homo sapiens] 164 2e-40
gi|143770880 laminin, beta 4 [Homo sapiens] 163 4e-40
gi|93204871 netrin 4 [Homo sapiens] 161 1e-39
gi|62868217 laminin, beta 3 precursor [Homo sapiens] 156 4e-38
gi|62868215 laminin, beta 3 precursor [Homo sapiens] 156 4e-38
gi|189083719 laminin, beta 3 precursor [Homo sapiens] 156 4e-38
gi|145309326 laminin, gamma 1 precursor [Homo sapiens] 150 3e-36
gi|167614504 laminin, beta 1 precursor [Homo sapiens] 149 7e-36
gi|219842266 usherin isoform B [Homo sapiens] 144 2e-34
gi|219842259 usherin isoform A [Homo sapiens] 144 2e-34
gi|21264602 laminin alpha 5 [Homo sapiens] 142 5e-34
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 125 7e-29
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 125 7e-29
gi|164414431 netrin G1 isoform 1 [Homo sapiens] 122 6e-28
gi|38788416 laminin, alpha 1 precursor [Homo sapiens] 122 1e-27
gi|190014607 netrin G2 [Homo sapiens] 115 1e-25
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 114 2e-25
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 114 2e-25
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 99 7e-21
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 87 3e-17
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 87 3e-17
gi|157419140 laminin, gamma 2 isoform b precursor [Homo sapiens] 83 6e-16
gi|157419138 laminin, gamma 2 isoform a precursor [Homo sapiens] 83 6e-16
gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 79 9e-15
gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens] 79 9e-15
gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 79 9e-15
>gi|24308065 netrin 5 [Homo sapiens]
Length = 489
Score = 1070 bits (2768), Expect = 0.0
Identities = 489/489 (100%), Positives = 489/489 (100%)
Query: 1 MPVTFALLLLLGQATADPCYDPQGRPQFCLPPVTQLAAVAASCPQACALSPGNHLGARET 60
MPVTFALLLLLGQATADPCYDPQGRPQFCLPPVTQLAAVAASCPQACALSPGNHLGARET
Sbjct: 1 MPVTFALLLLLGQATADPCYDPQGRPQFCLPPVTQLAAVAASCPQACALSPGNHLGARET 60
Query: 61 CNGSLTLALGGPFLLTSVSLRFCTPGPPALILSAAWASGGPWRLLWHRPAWPGALGGPER 120
CNGSLTLALGGPFLLTSVSLRFCTPGPPALILSAAWASGGPWRLLWHRPAWPGALGGPER
Sbjct: 61 CNGSLTLALGGPFLLTSVSLRFCTPGPPALILSAAWASGGPWRLLWHRPAWPGALGGPER 120
Query: 121 VTFHSTPGPKATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCAARARPPRCHCRHH 180
VTFHSTPGPKATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCAARARPPRCHCRHH
Sbjct: 121 VTFHSTPGPKATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCAARARPPRCHCRHH 180
Query: 181 TTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCE 240
TTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCE
Sbjct: 181 TTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCE 240
Query: 241 RCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGV 300
RCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGV
Sbjct: 241 RCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGV 300
Query: 301 TGLTCNRCGPGYQQSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMSDTRVHMSL 360
TGLTCNRCGPGYQQSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMSDTRVHMSL
Sbjct: 301 TGLTCNRCGPGYQQSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMSDTRVHMSL 360
Query: 361 RRYCQQDHVLRAQVLASEAAGPAWQRLAVRVLAVYKQRAQPVRRGDQDAWVPRADLTCGC 420
RRYCQQDHVLRAQVLASEAAGPAWQRLAVRVLAVYKQRAQPVRRGDQDAWVPRADLTCGC
Sbjct: 361 RRYCQQDHVLRAQVLASEAAGPAWQRLAVRVLAVYKQRAQPVRRGDQDAWVPRADLTCGC 420
Query: 421 LRLQPGTDYLLLGSAVGDPDPTRLILDRHGLALPWRPRWARPLKRLQQEERAGGCRGVRA 480
LRLQPGTDYLLLGSAVGDPDPTRLILDRHGLALPWRPRWARPLKRLQQEERAGGCRGVRA
Sbjct: 421 LRLQPGTDYLLLGSAVGDPDPTRLILDRHGLALPWRPRWARPLKRLQQEERAGGCRGVRA 480
Query: 481 PTPSPRPEH 489
PTPSPRPEH
Sbjct: 481 PTPSPRPEH 489
>gi|148613884 netrin 1 [Homo sapiens]
Length = 604
Score = 387 bits (995), Expect = e-108
Identities = 213/578 (36%), Positives = 300/578 (51%), Gaps = 111/578 (19%)
Query: 7 LLLLLGQATA-DPCYDPQGRPQFCLPPVTQLA-----AVAASC--PQA--CALSPGNH-- 54
L + GQA DPC D G P+ C+P A V+++C P A C +S
Sbjct: 28 LSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEER 87
Query: 55 LGARETCNGS------------------------------------LTLALGGPFLLTSV 78
L + CN S LTL+LG F +T V
Sbjct: 88 LRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQFPHNVTLTLSLGKKFEVTYV 147
Query: 79 SLRFCTPGPPALILSAAWASGGPW----------RLLWHRP------------------- 109
SL+FC+P P ++ + + G W R +++RP
Sbjct: 148 SLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSH 207
Query: 110 -----------AWPGALGGPERVTFHSTPGPKATVAASHLRVEFG--------------- 143
A+ G P F ++P + V A+ +RV F
Sbjct: 208 TDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSEL 267
Query: 144 --GQAGLAAAGLR--GRCQCHGHAARCAA-RARPPRCHCRHHTTGPGCESCRPSHRDWPW 198
A + L+ GRC+C+GHAARC R C CRH+T GP C+ C+P H D PW
Sbjct: 268 ARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPW 327
Query: 199 RPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGF 258
+ AT R + C+ C+CN HARRCRFN EL++LSG +SGGVC CRH+TAGRHCHYC+ G+
Sbjct: 328 QRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGY 387
Query: 259 WRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSP 318
+RD +PI R+AC+AC CHP+GA G TCNQT+GQC CK GVTG+TCNRC GYQQSRSP
Sbjct: 388 YRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSP 447
Query: 319 RMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMSDTRVHMSLRRYCQQDHVLRAQVLASE 378
PC +IP A T T + C +YC S ++ +++++YC++D+ ++ +L ++
Sbjct: 448 IAPCIKIPVAPPT--TAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKAD 505
Query: 379 AAGPAWQRLAVRVLAVYKQRAQPVRRGDQDAWVPRADLTCGCLRLQPGTDYLLLGSAVGD 438
AG W + V +++VYKQ +RRGDQ W+ D+ C C +++P YLLLG+A
Sbjct: 506 KAGD-WWKFTVNIISVYKQGTSRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDS 564
Query: 439 PDPTRLILDRHGLALPWRPRWARPLKRLQQEERAGGCR 476
PD + ++ D+ L + WR WAR L++ QQ E+ G C+
Sbjct: 565 PDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCK 602
>gi|5453810 netrin 3 [Homo sapiens]
Length = 580
Score = 377 bits (968), Expect = e-104
Identities = 229/566 (40%), Positives = 283/566 (50%), Gaps = 99/566 (17%)
Query: 5 FALLLLLGQATADPCYDPQGRPQFCLPPVTQLA-----------------AVAASCPQ-- 45
FA L A ADPC+D G P+ C+P + A A AS P+
Sbjct: 16 FAALSPGPPAPADPCHDEGGAPRGCVPGLVNAALGREVLASSTCGRPATRACDASDPRRA 75
Query: 46 ---ACALSPGNHLGA---------RETCNGSLTLALGGPFLLTSVSLRFCTPGPPALILS 93
A SPG R N +LT+ LG F L VSLRFC+ P ++ L
Sbjct: 76 HSPALLTSPGGTASPLCWRSESLPRAPLNVTLTVPLGKAFELVFVSLRFCSAPPASVALL 135
Query: 94 AAWASGGPWRLLWH-------------RPAWPGALGGPERVTF----------------- 123
+ G W L PA A GPE + F
Sbjct: 136 KSQDHGRSWAPLGFFSSHCDLDYGRLPAPANGPAGPGPEALCFPAPLAQPDGSGLLAFSM 195
Query: 124 ----------HSTPGPKATVAASHLRVEFGGQA--------------GLAAAGLR--GRC 157
S+P + V A+ +RV + AA L+ GRC
Sbjct: 196 QDSSPPGLDLDSSPVLQDWVTATDVRVVLTRPSTAGDPRDMEAVVPYSYAATDLQVGGRC 255
Query: 158 QCHGHAARCAARARPPR-CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQ 216
+C+GHA+RC + C CRH T GP C C+P + D PW+ AT R H CL CSCN
Sbjct: 256 KCNGHASRCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESHACLACSCNG 315
Query: 217 HARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQ 276
HARRCRFN EL+RLSG RSGGVC CRH+TAGRHCHYC+ GF+RDP + + RRACRAC
Sbjct: 316 HARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACD 375
Query: 277 CHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRIPEATTTLATTP 336
CHP+GA G TCNQT+GQC CK GVTGLTCNRC PG+QQSRSP PC + P T ++P
Sbjct: 376 CHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQQSRSPVAPCVKTPIPGPTEDSSP 435
Query: 337 GAYSSDPQ-CQNYCNMSDTRVHMSLRRYCQQDHVLRAQVLASEAAGPAWQRLAVRVLAVY 395
PQ C ++C + +SL+++C++D+ ++ V A A AW R V VLAV+
Sbjct: 436 ----VQPQDCDSHCKPARGSYRISLKKFCKKDYAVQVAVGARGEARGAWTRFPVAVLAVF 491
Query: 396 KQRAQPVRRGDQDAWVPRADLTCGCLRLQPGTDYLLLGSAVG------DPDPTRLILDRH 449
+ + RRG WVP D CGC RL PG YLLLG G LI R
Sbjct: 492 RSGEERARRGSSALWVPAGDAACGCPRLLPGRRYLLLGGGPGAAAGGAGGRGPGLIAARG 551
Query: 450 GLALPWRPRWARPLKRLQQEERAGGC 475
L LPWR W R L+RLQ+ ER G C
Sbjct: 552 SLVLPWRDAWTRRLRRLQRRERRGRC 577
>gi|119703755 laminin, beta 2 precursor [Homo sapiens]
Length = 1798
Score = 175 bits (444), Expect = 7e-44
Identities = 86/217 (39%), Positives = 115/217 (52%), Gaps = 22/217 (10%)
Query: 153 LRGRCQCHGHAARCAARARPPR---------CHCRHHTTGPGCESCRPSHRDWPWRPATP 203
+RG C C+GHA+ CA P C C+H+T G CE C+ +RD PWRPA
Sbjct: 279 VRGNCFCYGHASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYRDLPWRPAED 338
Query: 204 RHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPS 263
H H C C C+ H C F+ ++ SG SGGVC+ C+H+TAGRHC C+P F+RDP+
Sbjct: 339 GHSHACRKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPT 398
Query: 264 QPIFSRRACRACQCHPIGA-TGGTCNQ--------TSGQCTCKLGVTGLTCNRCGPG-YQ 313
+ + CR+C C P+G+ GG C+ SGQC CK V G C +C G +
Sbjct: 399 KDLRDPAVCRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQQCRDGFFG 458
Query: 314 QSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQN-YC 349
S S R+ C+R T PG+ DP + YC
Sbjct: 459 LSISDRLGCRRC--QCNARGTVPGSTPCDPNSGSCYC 493
Score = 85.9 bits (211), Expect = 8e-17
Identities = 49/153 (32%), Positives = 65/153 (42%), Gaps = 38/153 (24%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPA-------TPRHPHPCLPCSCNQHARRCRFNSEL 227
CHCR TG CE+C P H P RP + P P +C+ H
Sbjct: 954 CHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLCECSGNIDPMDPDACDPHT--------- 1004
Query: 228 FRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGT- 286
G C RC HHT G HC +C+PGF +R++C C C+ +G
Sbjct: 1005 ---------GQCLRCLHHTEGPHCAHCKPGFHGQA-----ARQSCHRCTCNLLGTNPQQC 1050
Query: 287 -------CNQTSGQCTCKLGVTGLTCNRCGPGY 312
C+ +SGQC C V G +C+RC P +
Sbjct: 1051 PSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNF 1083
Score = 85.1 bits (209), Expect = 1e-16
Identities = 49/156 (31%), Positives = 63/156 (40%), Gaps = 17/156 (10%)
Query: 157 CQCHGHAARCAARARPPRC----HCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC 212
C+C G+ A P C HHT GP C C+P R + C C
Sbjct: 986 CECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCKPGFHGQAARQS-------CHRC 1038
Query: 213 SCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRAC 272
+CN + + S G C C + G C C P FW + S C
Sbjct: 1039 TCNLLGTNPQQCPSPDQCHCDPSSGQCP-CLPNVQGPSCDRCAPNFWN-----LTSGHGC 1092
Query: 273 RACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRC 308
+ C CHP A G TCN+ +GQC C+ G G TC+ C
Sbjct: 1093 QPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSEC 1128
Score = 83.2 bits (204), Expect = 5e-16
Identities = 58/179 (32%), Positives = 70/179 (39%), Gaps = 35/179 (19%)
Query: 144 GQAGLAAAGLRGRCQC-HGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPAT 202
G G G + CQC H A +C CR G C+ C+ +P
Sbjct: 819 GYYGFGPTGCQA-CQCSHEGALSSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGFP----- 872
Query: 203 PRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDP 262
C PC CN HA C ++ G C CR HT G HC C GF DP
Sbjct: 873 -----SCRPCVCNGHADECNTHT-----------GACLGCRDHTGGEHCERCIAGFHGDP 916
Query: 263 SQPIFSRRACRACQCHPIG-------ATGGTCNQTSGQ--CTCKLGVTGLTCNRCGPGY 312
P + CR C C P G AT ++ S Q C C+ G TGL C C PG+
Sbjct: 917 RLPYGGQ--CRPCPC-PEGPGSQRHFATSCHQDEYSQQIVCHCRAGYTGLRCEACAPGH 972
Score = 82.0 bits (201), Expect = 1e-15
Identities = 58/208 (27%), Positives = 80/208 (38%), Gaps = 38/208 (18%)
Query: 124 HSTPGPKATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCAARARPPRCHCRH---- 179
H T GP +H + F GQA + RC C+ P +CHC
Sbjct: 1012 HHTEGPHC----AHCKPGFHGQAARQSCH---RCTCNLLGTNPQQCPSPDQCHCDPSSGQ 1064
Query: 180 -----HTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
+ GP C+ C P+ W + H C PC+C+ R +E
Sbjct: 1065 CPCLPNVQGPSCDRCAPNF----WNLTSG---HGCQPCACHPSRARGPTCNEFT------ 1111
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQC 294
G C CR GR C CQ W DP C AC C G C++ +G C
Sbjct: 1112 --GQCH-CRAGFGGRTCSECQELHWGDPGLQ------CHACDCDSRGIDTPQCHRFTGHC 1162
Query: 295 TCKLGVTGLTCNRCGPGYQQSRSPRMPC 322
+C+ GV+G+ C++C G+ PC
Sbjct: 1163 SCRPGVSGVRCDQCARGFSGIFPACHPC 1190
Score = 72.4 bits (176), Expect = 9e-13
Identities = 43/113 (38%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 210 LPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSR 269
LPC CN +SE GG C C+ GR C C PG++ F
Sbjct: 781 LPCQCNPQGS---LSSEC-----NPHGGQC-LCKPGVVGRRCDLCAPGYYG------FGP 825
Query: 270 RACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPC 322
C+ACQC GA C +TSGQC C+ G GL C+RC G S R PC
Sbjct: 826 TGCQACQCSHEGALSSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGFPSCR-PC 877
Score = 69.7 bits (169), Expect = 6e-12
Identities = 55/223 (24%), Positives = 76/223 (34%), Gaps = 75/223 (33%)
Query: 156 RCQCHGHAARC---------AARARPPRCH-CRHHTTGPGCESCRPSHRDWPWRPATPRH 205
+C+CHGH C + C C+H+T G CE CRP P + R
Sbjct: 346 KCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDL--RD 403
Query: 206 PHPCLPCSCN----QHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRD 261
P C C C+ Q RC + + + G G C RC+ H G C C+ GF+
Sbjct: 404 PAVCRSCDCDPMGSQDGGRCDSHDDP---ALGLVSGQC-RCKEHVVGTRCQQCRDGFF-- 457
Query: 262 PSQPIFSRRACRACQCHPIGATGGT----------------------------------- 286
I R CR CQC+ G G+
Sbjct: 458 -GLSISDRLGCRRCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGHWGLSHDL 516
Query: 287 -----------------CNQTSGQCTCKLGVTGLTCNRCGPGY 312
C++ +GQC C+ + G C + PGY
Sbjct: 517 LGCRPCDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGY 559
Score = 50.1 bits (118), Expect = 5e-06
Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 30/114 (26%)
Query: 156 RCQCHGHAARCAARARPPR---CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC 212
RCQC+ + P C+C+ TG GC+ C P H W C PC
Sbjct: 469 RCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGH----W--GLSHDLLGCRPC 522
Query: 213 SCNQHARRCRFNSELFRLSGGRSGGVCER------CRHHTAGRHCHYCQPGFWR 260
C+ GG C+ CR H GR C QPG++R
Sbjct: 523 DCDV---------------GGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYFR 561
>gi|110611156 laminin, gamma 3 precursor [Homo sapiens]
Length = 1575
Score = 164 bits (415), Expect = 2e-40
Identities = 131/485 (27%), Positives = 174/485 (35%), Gaps = 149/485 (30%)
Query: 6 ALLLLLGQATADP---------CYDPQGRPQFCLP------------------------- 31
A LLLG A P CYD GRPQ CLP
Sbjct: 3 AAALLLGLALLAPRAAGAGMGACYDGAGRPQRCLPVFENAAFGRLAQASHTCGSPPEDFC 62
Query: 32 PVTQLAAVAASCPQACALSPGNH------------------------LGARETCNGSLTL 67
P A A C + A P H G + + ++TL
Sbjct: 63 PHVGAAGAGAHCQRCDAADPQRHHNASYLTDFHSQDESTWWQSPSMAFGVQYPTSVNITL 122
Query: 68 ALGGPFLLTSVSLRFCTPGPPALILSAAWASGGPW----------RLLWHRP-------- 109
LG + +T V L+F T P + + + GPW + + RP
Sbjct: 123 RLGKAYEITYVRLKFHTSRPESFAIYKRSRADGPWEPYQFYSASCQKTYGRPEGQYLRPG 182
Query: 110 -----------------------AWPGALGGPERVTFHSTPGPKATVAASHLRVE----- 141
A+ G P F +PG + V ++ L +
Sbjct: 183 EDERVAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLISLDRLN 242
Query: 142 -FGGQA------------GLAAAGLRGRCQCHGHAARCAAR-ARPPRCHCRHHTTGPGCE 187
FG ++ + GRC+C+GHA+ C A C C+H+TTG CE
Sbjct: 243 TFGDDIFKDPKVLQSYYYAVSDFSVGGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCE 302
Query: 188 SCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTA 247
C P +D PW T H CLPC+C+ + C F+ ELFR +G GG C CR HTA
Sbjct: 303 RCLPFFQDRPWARGTAEAAHECLPCNCSGRSEECTFDRELFRSTG--HGGRCHHCRDHTA 360
Query: 248 GRHCHYCQPGFWR-DPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCN 306
G HC CQ F+ DP P C+ C C G+ C+ T G C CK VTG C+
Sbjct: 361 GPHCERCQENFYHWDPRMP------CQPCDCQSAGSLHLQCDDT-GTCACKPTVTGWKCD 413
Query: 307 RCGPGYQ---------------------QSRSPRMPCQRIPEATTTLATTPGAYSSDPQC 345
RC PG+ RS R PC+ E PG ++ P
Sbjct: 414 RCLPGFHSLSEGGCRPCTCNPAGSLDTCDPRSGRCPCKENVEGNLCDRCRPGTFNLQPHN 473
Query: 346 QNYCN 350
C+
Sbjct: 474 PAGCS 478
Score = 95.9 bits (237), Expect = 7e-20
Identities = 57/161 (35%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 156 RCQCHGHAARCAARARPP---RC-HCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLP 211
+CQC G+ A P C C H+TTG CE C+ PR C+P
Sbjct: 809 QCQCSGNVDPNAVGNCDPLSGHCLRCLHNTTGDHCEHCQEGFYG---SALAPRPADKCMP 865
Query: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
CSC+ S ++ G C C H R C C PGF+ QP R
Sbjct: 866 CSCHPQG------SVSEQMPCDPVTGQCS-CLPHVTARDCSRCYPGFF--DLQP---GRG 913
Query: 272 CRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
CR+C+CHP+G+ C+ +GQCTC+ GVTG C+RC G+
Sbjct: 914 CRSCKCHPLGSQEDQCHPKTGQCTCRPGVTGQACDRCQLGF 954
Score = 72.8 bits (177), Expect = 7e-13
Identities = 54/184 (29%), Positives = 67/184 (36%), Gaps = 24/184 (13%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQ 216
C C+ H C C HHT GP CE C P P+ C PC C
Sbjct: 707 CTCNQHGT---CDPNTGICVCSHHTEGPSCERCLPGFYGNPFAGQAD----DCQPCPCPG 759
Query: 217 HARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQ 276
+ C E + VC C GR C C GF+ DP + C CQ
Sbjct: 760 QSA-CTTIPESREV-------VCTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQ 811
Query: 277 C--HPIGATGGTCNQTSGQC-TCKLGVTGLTCNRCGPG-YQQSRSPR-----MPCQRIPE 327
C + G C+ SG C C TG C C G Y + +PR MPC P+
Sbjct: 812 CSGNVDPNAVGNCDPLSGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQ 871
Query: 328 ATTT 331
+ +
Sbjct: 872 GSVS 875
Score = 67.0 bits (162), Expect = 4e-11
Identities = 47/142 (33%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHP-CLPCSCNQHARRCRFNSELFRLSGG 233
C C TG CESC P ++ R P+ C+PC+CNQH C N+
Sbjct: 673 CSCPTGYTGQFCESCAPGYK----REMPQGGPYASCVPCTCNQHG-TCDPNT-------- 719
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA--CRACQCHPIGATGGTCNQTS 291
G+C C HHT G C C PGF+ +P F+ +A C+ C C A
Sbjct: 720 ---GICV-CSHHTEGPSCERCLPGFYGNP----FAGQADDCQPCPCPGQSACTTIPESRE 771
Query: 292 GQCT-CKLGVTGLTCNRCGPGY 312
CT C G G C C G+
Sbjct: 772 VVCTHCPPGQRGRRCEVCDDGF 793
Score = 38.5 bits (88), Expect = 0.014
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 144 GQAGLAAAGLRGRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATP 203
G L+ G R C C+ + R RC C+ + G C+ CRP + P
Sbjct: 418 GFHSLSEGGCRP-CTCNPAGSLDTCDPRSGRCPCKENVEGNLCDRCRPGTFN-----LQP 471
Query: 204 RHPHPCLPCSCNQHARRC 221
+P C C C H++ C
Sbjct: 472 HNPAGCSSCFCYGHSKVC 489
Score = 30.8 bits (68), Expect = 2.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 294 CTCKLGVTGLTCNRCGPGYQQ 314
C+C G TG C C PGY++
Sbjct: 673 CSCPTGYTGQFCESCAPGYKR 693
>gi|143770880 laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 163 bits (412), Expect = 4e-40
Identities = 79/193 (40%), Positives = 105/193 (54%), Gaps = 22/193 (11%)
Query: 153 LRGRCQCHGHAARCAARAR-------PP-----RCHCRHHTTGPGCESCRPSHRDWPWRP 200
+RG C C+GHA+ C + PP +C C+H+T GP CE C+ +D PWRP
Sbjct: 261 VRGSCFCNGHASECRPMQKMRGDVFSPPGMVHGQCVCQHNTDGPNCERCKDFFQDAPWRP 320
Query: 201 ATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWR 260
A + C CSCN H+ RC F+ + SGG SGGVCE C+H+T G+HC C+P F+R
Sbjct: 321 AADLQDNACRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYR 380
Query: 261 DPSQPIFSRRACRACQCHPIGA-TGGTC--------NQTSGQCTCKLGVTGLTCNRCGPG 311
DP + I AC C+C P G +GG C +GQC CK V G C++C P
Sbjct: 381 DPLKTISDPYACIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPN 440
Query: 312 -YQQSRSPRMPCQ 323
Y S + + CQ
Sbjct: 441 HYGLSATDPLGCQ 453
Score = 72.8 bits (177), Expect = 7e-13
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 17/139 (12%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
+C C+ + G C+ C+P+H + P C PC CN L L+
Sbjct: 422 QCLCKENVEGAKCDQCKPNHYG-----LSATDPLGCQPCDCNPLG-------SLPFLTCD 469
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQ 293
G C C + G HC C G+W + C C C GA C+ +GQ
Sbjct: 470 VDTGQC-LCLSYVTGAHCEECTVGYWGLGNH----LHGCSPCDCDIGGAYSNVCSPKNGQ 524
Query: 294 CTCKLGVTGLTCNRCGPGY 312
C C+ VTG +C+ PGY
Sbjct: 525 CECRPHVTGRSCSEPAPGY 543
Score = 71.6 bits (174), Expect = 1e-12
Identities = 54/204 (26%), Positives = 74/204 (36%), Gaps = 45/204 (22%)
Query: 143 GGQAGLAAAGLRGRCQCHGHAAR-CAARAR-----PPRC--------HCRHHTTGPGCES 188
G Q G + G G + G + CA P C C H+T G C+
Sbjct: 946 GTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLRCLHNTQGANCQL 1005
Query: 189 CRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFN-SELFRLSGGRSGGVCE------- 240
C+P H + NQ RRC + S + + GG C
Sbjct: 1006 CKPGHYG----------------SALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTGA 1049
Query: 241 -RCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLG 299
C + G C C G+W + R C++C C P + C+Q +GQC CKLG
Sbjct: 1050 CPCLPNVTGLACDRCADGYWN-----LVPGRGCQSCDCDPRTSQSSHCDQLTGQCPCKLG 1104
Query: 300 VTGLTCNRCGPGYQQSRSPR-MPC 322
G C+ C Y R +PC
Sbjct: 1105 YGGKRCSECQENYYGDPPGRCIPC 1128
Score = 65.9 bits (159), Expect = 8e-11
Identities = 46/189 (24%), Positives = 64/189 (33%), Gaps = 32/189 (16%)
Query: 144 GQAGLAAAGLRGRCQCHGHAAR----------CAARARPPRCHCRHHTTGPGCESCRPSH 193
G G A RC CH C C C + TG C+ C +
Sbjct: 1009 GHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGY 1068
Query: 194 RDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHY 253
W P C C C+ + +L G C C+ G+ C
Sbjct: 1069 --WNLVPG-----RGCQSCDCDPRTSQSSHCDQLT--------GQCP-CKLGYGGKRCSE 1112
Query: 254 CQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQ 313
CQ ++ DP C C C+ G C+ +G C C+ GV+G C+RC G+
Sbjct: 1113 CQENYYGDPPG------RCIPCDCNRAGTQKPICDPDTGMCRCREGVSGQRCDRCARGHS 1166
Query: 314 QSRSPRMPC 322
Q + C
Sbjct: 1167 QEFPTCLQC 1175
Score = 65.1 bits (157), Expect = 1e-10
Identities = 47/177 (26%), Positives = 65/177 (36%), Gaps = 35/177 (19%)
Query: 157 CQCHGHAARCAARARPP-RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
C CH ++ + +C C +G C+ C + +P C PC CN
Sbjct: 817 CHCHPQGSKDTVCDQVTGQCPCHGEVSGRRCDRCLAGYFGFP----------SCHPCPCN 866
Query: 216 QHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRAC 275
+ A C + G C C T GR+C C G++ +PS S + CR C
Sbjct: 867 RFAELCDPET-----------GSCFNCGGFTTGRNCERCIDGYYGNPS----SGQPCRPC 911
Query: 276 QCHPIGAT----GGTCNQTSGQ----CTCKLGVTGLTCNRCGPG-YQQSRSPRMPCQ 323
C ++ +C Q C C G TG C C G Y R PCQ
Sbjct: 912 LCPDDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQ 968
Score = 62.4 bits (150), Expect = 9e-10
Identities = 35/98 (35%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 231 SGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQT 290
S R GG C+ C+ GR C C G + C C CHP G+ C+Q
Sbjct: 780 SCSRLGGQCQ-CKPLVVGRCCDRCSTGSYD------LGHHGCHPCHCHPQGSKDTVCDQV 832
Query: 291 SGQCTCKLGVTGLTCNRCGPGYQQSRSPR-MPCQRIPE 327
+GQC C V+G C+RC GY S PC R E
Sbjct: 833 TGQCPCHGEVSGRRCDRCLAGYFGFPSCHPCPCNRFAE 870
Score = 53.1 bits (126), Expect = 5e-07
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 274 ACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPG-YQQSRSPRMPCQRIPEAT 329
AC+CHP G+ G +C++ GQC CK V G C+RC G Y PC P+ +
Sbjct: 768 ACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQGS 824
Score = 42.0 bits (97), Expect = 0.001
Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 15/89 (16%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
+C C + TG CE C + W H H C PC C+ S
Sbjct: 474 QCLCLSYVTGAHCEECTVGY----W--GLGNHLHGCSPCDCDIGGAYSNVCSP------- 520
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDP 262
G CE CR H GR C PG++ P
Sbjct: 521 -KNGQCE-CRPHVTGRSCSEPAPGYFFAP 547
>gi|93204871 netrin 4 [Homo sapiens]
Length = 628
Score = 161 bits (407), Expect = 1e-39
Identities = 106/377 (28%), Positives = 168/377 (44%), Gaps = 67/377 (17%)
Query: 153 LRGRCQCHGHAARCAA-----RARPP--------RCHCRHHTTGPGCESCRPSHRDWPWR 199
++G C C+GHA +C + P +C C+H+T G C+ C P + D PW
Sbjct: 258 VKGSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYNDRPWE 317
Query: 200 PATPRH--PHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPG 257
A + P+ C C CN HA C F+ ++ SG RSGGVC+ C+H+T G++C C+PG
Sbjct: 318 AADGKTGAPNECRTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPG 377
Query: 258 FWRDPSQPIFSRRACRACQCHPIGA------TGGTCNQTSGQCTCKLGVTGLTCNRCGPG 311
F+RD +P + AC+ C CHP+G+ + C+ ++G C CK GV G C+RC G
Sbjct: 378 FYRDLRRPFSAPDACKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVG 437
Query: 312 YQQSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMSDTR-VHM------------ 358
Y C+ A + T SS Y + D R VH
Sbjct: 438 YWGFGD--YGCRPCDCAGSCDPITGDCISSHTDIDWYHEVPDFRPVHNKSEPAWEWEDAQ 495
Query: 359 -------------------SLRRYC--QQDHVLRAQVLASEAAGPAWQRLAVRVLAVYKQ 397
+ + +C + +VL+ ++L++ G + + V++ V K
Sbjct: 496 GFSALLHSGKCECKEQTLGNAKAFCGMKYSYVLKIKILSAHDKGTHVE-VNVKIKKVLKS 554
Query: 398 RAQPVRRGDQ----DAWVPRADLTCGCLRLQPGTDYLLLGSAVGDPDPTRLILDRHGLAL 453
+ RG + ++W R C C L PG +YL+ G D +LI++
Sbjct: 555 TKLKIFRGKRTLYPESWTDRG---CTCPILNPGLEYLVAGHE--DIRTGKLIVNMKSFVQ 609
Query: 454 PWRPRWARPLKRLQQEE 470
W+P R + + + E
Sbjct: 610 HWKPSLGRKVMDILKRE 626
>gi|62868217 laminin, beta 3 precursor [Homo sapiens]
Length = 1172
Score = 156 bits (395), Expect = 4e-38
Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 25/196 (12%)
Query: 129 PKATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCA----ARARPPR-------CHC 177
P A A S LR L+G C CHGHA RCA A A P C C
Sbjct: 235 PSAYYAVSQLR-------------LQGSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVC 281
Query: 178 RHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGG 237
+H+T GP CE C P + + PWRPA + H C C CN H+ C F+ +F S G GG
Sbjct: 282 QHNTAGPNCERCAPFYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPAVFAASQGAYGG 341
Query: 238 VCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGAT-GGTCNQTSGQCTC 296
VC+ CR HT G++C CQ ++R+ + C +C+C P GA G C+ +GQC C
Sbjct: 342 VCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPDGAVPGAPCDPVTGQCVC 401
Query: 297 KLGVTGLTCNRCGPGY 312
K V G C+ C PG+
Sbjct: 402 KEHVQGERCDLCKPGF 417
Score = 71.2 bits (173), Expect = 2e-12
Identities = 54/178 (30%), Positives = 73/178 (41%), Gaps = 31/178 (17%)
Query: 144 GQAGLAAAGLRG--RCQCH--GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWR 199
G GL A +G RC C+ G RC C + GP C+ C P H W+
Sbjct: 416 GFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCAPYH----WK 471
Query: 200 PATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHC-----HYC 254
A+ + C PC+C+ H NS + G C CR G C C
Sbjct: 472 LASGQG---CEPCACDPH------NS--LSPQCNQFTGQCP-CREGFGGLMCSAAAIRQC 519
Query: 255 QPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
+ D + CRAC C G G C++ SG+C C+ G+TG C++C GY
Sbjct: 520 PDRTYGDVAT------GCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQCQRGY 571
>gi|62868215 laminin, beta 3 precursor [Homo sapiens]
Length = 1172
Score = 156 bits (395), Expect = 4e-38
Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 25/196 (12%)
Query: 129 PKATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCA----ARARPPR-------CHC 177
P A A S LR L+G C CHGHA RCA A A P C C
Sbjct: 235 PSAYYAVSQLR-------------LQGSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVC 281
Query: 178 RHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGG 237
+H+T GP CE C P + + PWRPA + H C C CN H+ C F+ +F S G GG
Sbjct: 282 QHNTAGPNCERCAPFYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPAVFAASQGAYGG 341
Query: 238 VCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGAT-GGTCNQTSGQCTC 296
VC+ CR HT G++C CQ ++R+ + C +C+C P GA G C+ +GQC C
Sbjct: 342 VCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPDGAVPGAPCDPVTGQCVC 401
Query: 297 KLGVTGLTCNRCGPGY 312
K V G C+ C PG+
Sbjct: 402 KEHVQGERCDLCKPGF 417
Score = 71.2 bits (173), Expect = 2e-12
Identities = 54/178 (30%), Positives = 73/178 (41%), Gaps = 31/178 (17%)
Query: 144 GQAGLAAAGLRG--RCQCH--GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWR 199
G GL A +G RC C+ G RC C + GP C+ C P H W+
Sbjct: 416 GFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCAPYH----WK 471
Query: 200 PATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHC-----HYC 254
A+ + C PC+C+ H NS + G C CR G C C
Sbjct: 472 LASGQG---CEPCACDPH------NS--LSPQCNQFTGQCP-CREGFGGLMCSAAAIRQC 519
Query: 255 QPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
+ D + CRAC C G G C++ SG+C C+ G+TG C++C GY
Sbjct: 520 PDRTYGDVAT------GCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQCQRGY 571
>gi|189083719 laminin, beta 3 precursor [Homo sapiens]
Length = 1172
Score = 156 bits (395), Expect = 4e-38
Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 25/196 (12%)
Query: 129 PKATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCA----ARARPPR-------CHC 177
P A A S LR L+G C CHGHA RCA A A P C C
Sbjct: 235 PSAYYAVSQLR-------------LQGSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVC 281
Query: 178 RHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGG 237
+H+T GP CE C P + + PWRPA + H C C CN H+ C F+ +F S G GG
Sbjct: 282 QHNTAGPNCERCAPFYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPAVFAASQGAYGG 341
Query: 238 VCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGAT-GGTCNQTSGQCTC 296
VC+ CR HT G++C CQ ++R+ + C +C+C P GA G C+ +GQC C
Sbjct: 342 VCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPDGAVPGAPCDPVTGQCVC 401
Query: 297 KLGVTGLTCNRCGPGY 312
K V G C+ C PG+
Sbjct: 402 KEHVQGERCDLCKPGF 417
Score = 71.2 bits (173), Expect = 2e-12
Identities = 54/178 (30%), Positives = 73/178 (41%), Gaps = 31/178 (17%)
Query: 144 GQAGLAAAGLRG--RCQCH--GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWR 199
G GL A +G RC C+ G RC C + GP C+ C P H W+
Sbjct: 416 GFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCAPYH----WK 471
Query: 200 PATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHC-----HYC 254
A+ + C PC+C+ H NS + G C CR G C C
Sbjct: 472 LASGQG---CEPCACDPH------NS--LSPQCNQFTGQCP-CREGFGGLMCSAAAIRQC 519
Query: 255 QPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
+ D + CRAC C G G C++ SG+C C+ G+TG C++C GY
Sbjct: 520 PDRTYGDVAT------GCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQCQRGY 571
>gi|145309326 laminin, gamma 1 precursor [Homo sapiens]
Length = 1609
Score = 150 bits (378), Expect = 3e-36
Identities = 112/427 (26%), Positives = 161/427 (37%), Gaps = 118/427 (27%)
Query: 13 QATADPCYDPQGRPQFCLPPVTQLAA-VAASCPQACALSPGNHL------GARETCNG-- 63
QA D C D GRPQ C+P A V C P + G ++C+
Sbjct: 34 QAAMDECTDEGGRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQTGVTGVTKSCHLCD 93
Query: 64 ----------------------------------------SLTLALGGPFLLTSVSLRFC 83
+LTL LG F +T V L+F
Sbjct: 94 AGQPHLQHGAAFLTDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFH 153
Query: 84 TPGPPALILSAAWASGGPW----------------------------------------- 102
T P + + GPW
Sbjct: 154 TSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDIS 213
Query: 103 RLLWHRPAWPGALGGPERVTFHSTPGPKATVAASHLRVE------FGGQA---------- 146
L A+ G P F ++P + V A+ +RV FG +
Sbjct: 214 PLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSY 273
Query: 147 --GLAAAGLRGRCQCHGHAARCAARARPPR-CHCRHHTTGPGCESCRPSHRDWPWRPATP 203
++ + GRC+C+GHA+ C C+C+H+T G CE C P D PWR AT
Sbjct: 274 YYAISDFAVGGRCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATA 333
Query: 204 RHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPS 263
CLPC CN ++ C F+ EL+R +G GG C C+ +T G HC C+ F+R
Sbjct: 334 ESASECLPCDCNGRSQECYFDPELYRSTG--HGGHCTNCQDNTDGAHCERCRENFFR--- 388
Query: 264 QPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQ-SRSPRMPC 322
+ + AC +C C P+G+ C+ + G+C+CK GV G C+RC PG+ + + PC
Sbjct: 389 --LGNNEACSSCHCSPVGSLSTQCD-SYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPC 445
Query: 323 QRIPEAT 329
P +
Sbjct: 446 SCDPSGS 452
Score = 80.9 bits (198), Expect = 2e-15
Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 177 CRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSG 236
C ++T G C+ C+ P P C C+CN + + + S
Sbjct: 852 CIYNTAGFYCDRCKDGFFG---NPLAPNPADKCKACNCNLYGTMKQ------QSSCNPVT 902
Query: 237 GVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTC 296
G CE C H G+ C C PGF+ + S + C C CH +G+T G C+ +GQC C
Sbjct: 903 GQCE-CLPHVTGQDCGACDPGFYN-----LQSGQGCERCDCHALGSTNGQCDIRTGQCEC 956
Query: 297 KLGVTGLTCNRC-----GPGYQQSRSPRMPCQRIPEATTTL 332
+ G+TG C RC G G + + PC PE + +L
Sbjct: 957 QPGITGQHCERCEVNHFGFGPEGCK----PCDCHPEGSLSL 993
Score = 80.5 bits (197), Expect = 3e-15
Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 59/219 (26%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC-- 214
C C+GH+ C C+CR +T GP CE C + + +T C PC C
Sbjct: 724 CACNGHSETCDPETGV--CNCRDNTAGPHCEKCSDGY----YGDSTAGTSSDCQPCPCPG 777
Query: 215 --------------------NQHARRCRFNSE-LFRLSGGRSG----------------- 236
+RC + F GR+G
Sbjct: 778 GSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPN 837
Query: 237 ---------GVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGA--TGG 285
G C +C ++TAG +C C+ GF+ +P P + + C+AC C+ G
Sbjct: 838 AVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADK-CKACNCNLYGTMKQQS 896
Query: 286 TCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQR 324
+CN +GQC C VTG C C PG+ +S + C+R
Sbjct: 897 SCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQ-GCER 934
Score = 63.5 bits (153), Expect = 4e-10
Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPH-PCLPCSCNQHARRCRFNSELFRLSGG 233
C C G CE C +R R P+ PC+ C+CN H+ C
Sbjct: 690 CTCPVGYGGQFCEMCLSGYR----RETPNLGPYSPCVLCACNGHSETC-----------D 734
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSG- 292
GVC CR +TAG HC C G++ D + S C+ C C P G++ +T
Sbjct: 735 PETGVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSS--DCQPCPC-PGGSSCAVVPKTKEV 790
Query: 293 QCT-CKLGVTGLTCNRCGPGY 312
CT C G TG C C GY
Sbjct: 791 VCTNCPTGTTGKRCELCDDGY 811
Score = 61.2 bits (147), Expect = 2e-09
Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 36/159 (22%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
+C C H TG C +C P + + C C C HA G
Sbjct: 904 QCECLPHVTGQDCGACDPGFYNL-------QSGQGCERCDC--HAL-------------G 941
Query: 234 RSGGVCE------RCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTC 287
+ G C+ C+ G+HC C+ + F C+ C CHP G+ C
Sbjct: 942 STNGQCDIRTGQCECQPGITGQHCERCEVNHFG------FGPEGCKPCDCHPEGSLSLQC 995
Query: 288 NQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRIP 326
G+C C+ G G C++C Y +RS CQ P
Sbjct: 996 KD-DGRCECREGFVGNRCDQCEENYFYNRS-WPGCQECP 1032
Score = 44.3 bits (103), Expect = 3e-04
Identities = 32/124 (25%), Positives = 46/124 (37%), Gaps = 27/124 (21%)
Query: 156 RCQCHG-HAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC 214
RC CH + R +C C+ TG CE C +H + P C PC C
Sbjct: 934 RCDCHALGSTNGQCDIRTGQCECQPGITGQHCERCEVNHFGF--------GPEGCKPCDC 985
Query: 215 NQH---ARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
+ + +C + G CE CR G C C+ ++ + S P +
Sbjct: 986 HPEGSLSLQC------------KDDGRCE-CREGFVGNRCDQCEENYFYNRSWP--GCQE 1030
Query: 272 CRAC 275
C AC
Sbjct: 1031 CPAC 1034
Score = 37.4 bits (85), Expect = 0.031
Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 6/78 (7%)
Query: 144 GQAGLAAAGLRGRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATP 203
G L AG R C C + RC C+ + G CE C+P +
Sbjct: 433 GFHSLTEAGCRP-CSCDPSGSIDECNIETGRCVCKDNVEGFNCERCKPGFFN-----LES 486
Query: 204 RHPHPCLPCSCNQHARRC 221
+P C PC C H+ C
Sbjct: 487 SNPRGCTPCFCFGHSSVC 504
>gi|167614504 laminin, beta 1 precursor [Homo sapiens]
Length = 1786
Score = 149 bits (375), Expect = 7e-36
Identities = 79/225 (35%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 153 LRGRCQCHGHAARCAA---------RARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATP 203
+RG C C+GHA+ CA C CRH+T G CE C + D PWRPA
Sbjct: 267 VRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEG 326
Query: 204 RHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPS 263
R+ + C C+CN+H+ C F+ ++ +G SGGVC+ C+H+T GR+C C+P +++ P
Sbjct: 327 RNSNACKKCNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPE 386
Query: 264 QPIFSRRACRACQCHPIGATG-GTCNQ--------TSGQCTCKLGVTGLTCNRCGPG-YQ 313
+ I C C C P G+ G C+ +GQC CKL V G C+ C G Y
Sbjct: 387 RDIRDPNFCERCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYD 446
Query: 314 QSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQN-YCNMSDTRVH 357
S C+ A L T PG D + + YC T H
Sbjct: 447 LSSEDPFGCKSC--ACNPLGTIPGGNPCDSETGHCYCKRLVTGQH 489
Score = 84.7 bits (208), Expect = 2e-16
Identities = 53/170 (31%), Positives = 70/170 (41%), Gaps = 22/170 (12%)
Query: 155 GRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC 214
G Q H + + C +C C + G C+ C P+ W+ A+ C PC+C
Sbjct: 1034 GTVQEHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPN----TWQLASGTG---CDPCNC 1086
Query: 215 NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRA 274
N + F S G C+ C GR C CQ FW DP CRA
Sbjct: 1087 NA--------AHSFGPSCNEFTGQCQ-CMPGFGGRTCSECQELFWGDPDVE------CRA 1131
Query: 275 CQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQR 324
C C P G C+Q++GQC C GV G C++C GY PC +
Sbjct: 1132 CDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQ 1181
Score = 70.9 bits (172), Expect = 3e-12
Identities = 58/219 (26%), Positives = 80/219 (36%), Gaps = 66/219 (30%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC---- 212
CQC+GHA C +C+ +T G CE C + P + H PC PC
Sbjct: 867 CQCNGHADDCDP-VTGECLNCQDYTMGHNCERCLAGYYGDPII-GSGDHCRPC-PCPDGP 923
Query: 213 -SCNQHARRCRFNSELFRLS--------------------------GG------------ 233
S Q AR C + +L+ GG
Sbjct: 924 DSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNID 983
Query: 234 --------RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGG 285
+ G C +C +HT G HC +C+ G++ D Q + CR C C+ +G
Sbjct: 984 TTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALQ-----QDCRKCVCNYLGTVQE 1038
Query: 286 TCN-------QTSGQCTCKLGVTGLTCNRCGPGYQQSRS 317
CN + +GQC C V G C+RC P Q S
Sbjct: 1039 HCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLAS 1077
Score = 69.7 bits (169), Expect = 6e-12
Identities = 52/179 (29%), Positives = 66/179 (36%), Gaps = 35/179 (19%)
Query: 144 GQAGLAAAGLRGRCQCHGHAARCA-ARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPAT 202
G G +G + C+CH + A +CHC C+ C P H +P
Sbjct: 809 GTFGFGPSGCKP-CECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFP----- 862
Query: 203 PRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDP 262
C PC CN HA C G C C+ +T G +C C G++ DP
Sbjct: 863 -----SCQPCQCNGHADDC-----------DPVTGECLNCQDYTMGHNCERCLAGYYGDP 906
Query: 263 SQPIFSRRACRACQCHPIGATGG-----TCNQ----TSGQCTCKLGVTGLTCNRCGPGY 312
I S CR C C P G G +C Q C C G G C+ C GY
Sbjct: 907 I--IGSGDHCRPCPC-PDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGY 962
Score = 69.3 bits (168), Expect = 7e-12
Identities = 54/220 (24%), Positives = 80/220 (36%), Gaps = 69/220 (31%)
Query: 156 RCQCHGHAARC---------AARARPPRCH-CRHHTTGPGCESCRPSHRDWPWRPATPRH 205
+C C+ H+ C C C+H+T G CE C+P + P R R
Sbjct: 334 KCNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDI--RD 391
Query: 206 PHPCLPCSCNQHARRCRFNSELFR-LSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQ 264
P+ C C+C+ + + + S G G C RC+ + G HC C+ GF+ S+
Sbjct: 392 PNFCERCTCDPAGSQNEGICDSYTDFSTGLIAGQC-RCKLNVEGEHCDVCKEGFYDLSSE 450
Query: 265 PIFSRRACRACQCHPIGA--------------------TGGTCNQT-------------- 290
F C++C C+P+G TG C+Q
Sbjct: 451 DPFG---CKSCACNPLGTIPGGNPCDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGC 507
Query: 291 ------------------SGQCTCKLGVTGLTCNRCGPGY 312
SGQC+C+ + G CN PGY
Sbjct: 508 RPCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGY 547
Score = 66.6 bits (161), Expect = 5e-11
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQC 294
+GG C+ CR + GR C+ C PG + F C+ C+CH G+ CN +GQC
Sbjct: 788 NGGQCQ-CRPNVVGRTCNRCAPGTFG------FGPSGCKPCECHLQGSVNAFCNPVTGQC 840
Query: 295 TCKLGVTGLTCNRCGPGYQQSRSPRMPCQ 323
C GV C+RC PG+ S + PCQ
Sbjct: 841 HCFQGVYARQCDRCLPGHWGFPSCQ-PCQ 868
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/140 (27%), Positives = 50/140 (35%), Gaps = 29/140 (20%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
+C CR + G C C P + P C PC C+ F + +
Sbjct: 791 QCQCRPNVVGRTCNRCAPGTFGF--------GPSGCKPCECHLQGSVNAFCNPV------ 836
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQ 293
G C C R C C PG W PS C+ CQC+ C+ +G+
Sbjct: 837 --TGQC-HCFQGVYARQCDRCLPGHWGFPS--------CQPCQCN---GHADDCDPVTGE 882
Query: 294 C-TCKLGVTGLTCNRCGPGY 312
C C+ G C RC GY
Sbjct: 883 CLNCQDYTMGHNCERCLAGY 902
Score = 52.4 bits (124), Expect = 9e-07
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 274 ACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPG 311
AC+C P G+ C+ GQC C+ V G TCNRC PG
Sbjct: 772 ACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPG 809
Score = 44.7 bits (104), Expect = 2e-04
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 15/85 (17%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C+C+ TG C+ C P H W C PC C+ N+ F SG
Sbjct: 479 CYCKRLVTGQHCDQCLPEH----W--GLSNDLDGCRPCDCDLGGA---LNNSCFAESGQC 529
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFW 259
S CR H GR C+ +PG++
Sbjct: 530 S------CRPHMIGRQCNEVEPGYY 548
>gi|219842266 usherin isoform B [Homo sapiens]
Length = 5202
Score = 144 bits (362), Expect = 2e-34
Identities = 81/226 (35%), Positives = 108/226 (47%), Gaps = 29/226 (12%)
Query: 112 PGALGGPERVTFHSTPGPKATVAASHLRVEFGGQ--AGLAAAGLR------------GRC 157
PG P F++TP + V A+ +R F GQ A LR GRC
Sbjct: 459 PGPNYRPGYNNFYNTPSLQEFVKATQIRFHFHGQYYTTETAVNLRHRYYAVDEITISGRC 518
Query: 158 QCHGHAARCAARARPPRCHCRHH--TTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
QCHGHA C ++P RC C T G C+ C P + D P+R + C PC CN
Sbjct: 519 QCHGHADNCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFRQGDQVYAFNCKPCQCN 578
Query: 216 QHARRCRFNS-------ELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFS 268
H++ C +N E FR GG GGVC+ C H+T GR+C C+ F+R +
Sbjct: 579 SHSKSCHYNISVDPFPFEHFR--GG--GGVCDDCEHNTTGRNCELCKDYFFRQVGADPSA 634
Query: 269 RRACRACQCHPIGATGGT--CNQTSGQCTCKLGVTGLTCNRCGPGY 312
C+ C C +G G+ C+Q GQC CK V+G CN+C G+
Sbjct: 635 IDVCKPCDCDTVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGF 680
Score = 70.5 bits (171), Expect = 3e-12
Identities = 55/203 (27%), Positives = 75/203 (36%), Gaps = 37/203 (18%)
Query: 157 CQCHGHAA-RCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
CQC+ H + +C C+ G C++CR + C C C+
Sbjct: 747 CQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGLDVTN--------CKACDCD 798
Query: 216 QHARRCRFNSELFRLSGGRSGGVCER------CRHHTAGRHCHYCQPGFWRDPSQPIFSR 269
+G G VC C+ + GR C+ C G + F
Sbjct: 799 T--------------AGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSF-- 842
Query: 270 RACRACQCHPIGATGGT--CNQTSGQCTCKLGVTGLTCNRCGP-GYQQSRSPRMPCQRIP 326
C C C G G+ CN+++GQC CKLGVTGL CN+C P Y + CQ
Sbjct: 843 -LCLPCNCDKTGTINGSLLCNKSTGQCPCKLGVTGLRCNQCEPHRYNLTIDNFQHCQMC- 900
Query: 327 EATTTLATTPGAYSSDPQCQNYC 349
+L T PG Q C
Sbjct: 901 -ECDSLGTLPGTICDPISGQCLC 922
Score = 68.6 bits (166), Expect = 1e-11
Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 25/140 (17%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHAR-----RCRFNSELF 228
+C+C+ H +G C C+ + P C PC+CN C NS
Sbjct: 661 QCNCKRHVSGRQCNQCQNGFYN-----LQELDPDGCSPCNCNTSGTVDGDITCHQNS--- 712
Query: 229 RLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCN 288
G C +C+ + G C +C GF S F+ C CQC+ G+ CN
Sbjct: 713 --------GQC-KCKANVIGLRCDHCNFGFKFLRS---FNDVGCEPCQCNLHGSVNKFCN 760
Query: 289 QTSGQCTCKLGVTGLTCNRC 308
SGQC CK GL C+ C
Sbjct: 761 PHSGQCECKKEAKGLQCDTC 780
Score = 64.7 bits (156), Expect = 2e-10
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 16/167 (9%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQ 216
C G A+ +C C+ + G C C + + CLPC+C++
Sbjct: 797 CDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFY-----LRQNNSFLCLPCNCDK 851
Query: 217 HARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQ 276
N L +S G C C+ G C+ C+P + + I + + C+ C+
Sbjct: 852 TGT---INGSLLC---NKSTGQCP-CKLGVTGLRCNQCEPHRY---NLTIDNFQHCQMCE 901
Query: 277 CHPIGATGGT-CNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPC 322
C +G GT C+ SGQC C G CN+C PG+ S C
Sbjct: 902 CDSLGTLPGTICDPISGQCLCVPNRQGRRCNQCQPGFYISPGNATGC 948
Score = 63.2 bits (152), Expect = 5e-10
Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
+C C + G C C+P +P + CLPCSC+ + L
Sbjct: 919 QCLCVPNRQGRRCNQCQPGFY------ISPGNATGCLPCSCHTTGAVNHICNSLT----- 967
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQ 293
G C AG+ C C+ ++ Q C+ C CH GA TC+ +GQ
Sbjct: 968 ---GQCVCQDASIAGQRCDQCKDHYFGFDPQT----GRCQPCNCHLSGALNETCHLVTGQ 1020
Query: 294 CTCKLGVTGLTCNRCGP 310
C CK VTG C+ C P
Sbjct: 1021 CFCKQFVTGSKCDACVP 1037
>gi|219842259 usherin isoform A [Homo sapiens]
Length = 1546
Score = 144 bits (362), Expect = 2e-34
Identities = 81/226 (35%), Positives = 108/226 (47%), Gaps = 29/226 (12%)
Query: 112 PGALGGPERVTFHSTPGPKATVAASHLRVEFGGQ--AGLAAAGLR------------GRC 157
PG P F++TP + V A+ +R F GQ A LR GRC
Sbjct: 459 PGPNYRPGYNNFYNTPSLQEFVKATQIRFHFHGQYYTTETAVNLRHRYYAVDEITISGRC 518
Query: 158 QCHGHAARCAARARPPRCHCRHH--TTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
QCHGHA C ++P RC C T G C+ C P + D P+R + C PC CN
Sbjct: 519 QCHGHADNCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFRQGDQVYAFNCKPCQCN 578
Query: 216 QHARRCRFNS-------ELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFS 268
H++ C +N E FR GG GGVC+ C H+T GR+C C+ F+R +
Sbjct: 579 SHSKSCHYNISVDPFPFEHFR--GG--GGVCDDCEHNTTGRNCELCKDYFFRQVGADPSA 634
Query: 269 RRACRACQCHPIGATGGT--CNQTSGQCTCKLGVTGLTCNRCGPGY 312
C+ C C +G G+ C+Q GQC CK V+G CN+C G+
Sbjct: 635 IDVCKPCDCDTVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGF 680
Score = 70.5 bits (171), Expect = 3e-12
Identities = 55/203 (27%), Positives = 75/203 (36%), Gaps = 37/203 (18%)
Query: 157 CQCHGHAA-RCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
CQC+ H + +C C+ G C++CR + C C C+
Sbjct: 747 CQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGLDVTN--------CKACDCD 798
Query: 216 QHARRCRFNSELFRLSGGRSGGVCER------CRHHTAGRHCHYCQPGFWRDPSQPIFSR 269
+G G VC C+ + GR C+ C G + F
Sbjct: 799 T--------------AGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSF-- 842
Query: 270 RACRACQCHPIGATGGT--CNQTSGQCTCKLGVTGLTCNRCGP-GYQQSRSPRMPCQRIP 326
C C C G G+ CN+++GQC CKLGVTGL CN+C P Y + CQ
Sbjct: 843 -LCLPCNCDKTGTINGSLLCNKSTGQCPCKLGVTGLRCNQCEPHRYNLTIDNFQHCQMC- 900
Query: 327 EATTTLATTPGAYSSDPQCQNYC 349
+L T PG Q C
Sbjct: 901 -ECDSLGTLPGTICDPISGQCLC 922
Score = 68.6 bits (166), Expect = 1e-11
Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 25/140 (17%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHAR-----RCRFNSELF 228
+C+C+ H +G C C+ + P C PC+CN C NS
Sbjct: 661 QCNCKRHVSGRQCNQCQNGFYN-----LQELDPDGCSPCNCNTSGTVDGDITCHQNS--- 712
Query: 229 RLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCN 288
G C +C+ + G C +C GF S F+ C CQC+ G+ CN
Sbjct: 713 --------GQC-KCKANVIGLRCDHCNFGFKFLRS---FNDVGCEPCQCNLHGSVNKFCN 760
Query: 289 QTSGQCTCKLGVTGLTCNRC 308
SGQC CK GL C+ C
Sbjct: 761 PHSGQCECKKEAKGLQCDTC 780
Score = 64.7 bits (156), Expect = 2e-10
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 16/167 (9%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQ 216
C G A+ +C C+ + G C C + + CLPC+C++
Sbjct: 797 CDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFY-----LRQNNSFLCLPCNCDK 851
Query: 217 HARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQ 276
N L +S G C C+ G C+ C+P + + I + + C+ C+
Sbjct: 852 TGT---INGSLLC---NKSTGQCP-CKLGVTGLRCNQCEPHRY---NLTIDNFQHCQMCE 901
Query: 277 CHPIGATGGT-CNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPC 322
C +G GT C+ SGQC C G CN+C PG+ S C
Sbjct: 902 CDSLGTLPGTICDPISGQCLCVPNRQGRRCNQCQPGFYISPGNATGC 948
Score = 63.2 bits (152), Expect = 5e-10
Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
+C C + G C C+P +P + CLPCSC+ + L
Sbjct: 919 QCLCVPNRQGRRCNQCQPGFY------ISPGNATGCLPCSCHTTGAVNHICNSLT----- 967
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQ 293
G C AG+ C C+ ++ Q C+ C CH GA TC+ +GQ
Sbjct: 968 ---GQCVCQDASIAGQRCDQCKDHYFGFDPQT----GRCQPCNCHLSGALNETCHLVTGQ 1020
Query: 294 CTCKLGVTGLTCNRCGP 310
C CK VTG C+ C P
Sbjct: 1021 CFCKQFVTGSKCDACVP 1037
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 142 bits (359), Expect = 5e-34
Identities = 74/215 (34%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 155 GRCQCHGHAARCAARARPP----RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCL 210
GRC CHGHA C A+ +C C+H+T G C+ C P PW+PAT + C
Sbjct: 298 GRCVCHGHADACDAKDPTDPFRLQCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANECQ 357
Query: 211 PCSCNQHARRCRFNSELFRLSGGRS-------GGVCERCRHHTAGRHCHYCQPGFWRDPS 263
C+C HA C ++ E+ R +S GGVC C+HHT G +C C PGF+R P+
Sbjct: 358 SCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPN 417
Query: 264 QPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY----------- 312
P+ S CR C C T GTC +G+C C+ +G C+ C G+
Sbjct: 418 HPLDSPHVCRRCNCES-DFTDGTCEDLTGRCYCRPNFSGERCDVCAEGFTGFPSCYPTPS 476
Query: 313 --QQSRSPRMPCQRIPEATTTLATTPG-AYSSDPQ 344
+R +P +I + A T G A DP+
Sbjct: 477 SSNDTREQVLPAGQIVNCDCSAAGTQGNACRKDPR 511
Score = 85.1 bits (209), Expect = 1e-16
Identities = 60/231 (25%), Positives = 74/231 (32%), Gaps = 86/231 (37%)
Query: 157 CQCHGHAARCAARARPPR-----------------CHCRHHTTGPGCESCRPSHRDWPWR 199
C C+GHA C R C+HHTTG CE C P P
Sbjct: 359 CNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPNH 418
Query: 200 PATPRHPHPCLPCSC--------------------NQHARRCRFNSELFR---------- 229
P PH C C+C N RC +E F
Sbjct: 419 PLDS--PHVCRRCNCESDFTDGTCEDLTGRCYCRPNFSGERCDVCAEGFTGFPSCYPTPS 476
Query: 230 --------------------LSGGRSGGVCER--------CRHHTAGRHCHYCQPGFWRD 261
+ G G C + C+ + G HC C PGF+
Sbjct: 477 SSNDTREQVLPAGQIVNCDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYGP 536
Query: 262 PSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
QP CQC G C+ +GQC C++G G TC+RC PGY
Sbjct: 537 GCQP---------CQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGY 578
Score = 82.8 bits (203), Expect = 6e-16
Identities = 48/138 (34%), Positives = 62/138 (44%), Gaps = 28/138 (20%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
RC C+ GP C+ CRP + +P C C+C+ L +L G
Sbjct: 604 RCLCQPEFAGPHCDRCRPGYHGFP----------NCQACTCDPRGA-------LDQLCG- 645
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQ 293
+GG+C RCR G C C PGF PS C C C G+ C+ SGQ
Sbjct: 646 -AGGLC-RCRPGYTGTACQECSPGFHGFPS--------CVPCHCSAEGSLHAACDPRSGQ 695
Query: 294 CTCKLGVTGLTCNRCGPG 311
C+C+ VTGL C+ C PG
Sbjct: 696 CSCRPRVTGLRCDTCVPG 713
Score = 81.3 bits (199), Expect = 2e-15
Identities = 48/150 (32%), Positives = 60/150 (40%), Gaps = 16/150 (10%)
Query: 163 AARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCR 222
A C R +C C+ G CE C P P + C PC C+ +
Sbjct: 1925 AEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSS-----CQPCDCSGNGDPNL 1979
Query: 223 FNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGA 282
S+ L+G C C HT G C C PGF+ + P C C C P G
Sbjct: 1980 LFSDCDPLTGA-----CRGCLRHTTGPRCEICAPGFYGNALLP----GNCTRCDCTPCGT 2030
Query: 283 TGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
C+ SG C CK GVTG C+RC G+
Sbjct: 2031 E--ACDPHSGHCLCKAGVTGRRCDRCQEGH 2058
Score = 79.0 bits (193), Expect = 9e-15
Identities = 49/147 (33%), Positives = 60/147 (40%), Gaps = 31/147 (21%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C C G C+ C P +R C+PC C+ H+ RC S
Sbjct: 1831 CLCPASYRGDSCQECAPGF----YRDVKGLFLGRCVPCQCHGHSDRCLPGS--------- 1877
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWR---DPSQPIFSRRACRACQCHPIG------ATGG 285
GVC C+H+T G HC CQ GF DPS P C +C C P+ A G
Sbjct: 1878 --GVCVDCQHNTEGAHCERCQAGFVSSRDDPSAP------CVSCPC-PLSVPSNNFAEGC 1928
Query: 286 TCNQTSGQCTCKLGVTGLTCNRCGPGY 312
QC CK G G +C RC PG+
Sbjct: 1929 VLRGGRTQCLCKPGYAGASCERCAPGF 1955
Score = 78.6 bits (192), Expect = 1e-14
Identities = 82/289 (28%), Positives = 105/289 (36%), Gaps = 57/289 (19%)
Query: 37 AAVAASCPQACALS-PGNHLGARETCNGSLTLALGGPFLLTSVSLRFCTPG---PPALIL 92
+A SCP C LS P N+ G T L P S C PG P ++
Sbjct: 1907 SAPCVSCP--CPLSVPSNNFAEGCVLRGGRTQCLCKPGY-AGASCERCAPGFFGNPLVLG 1963
Query: 93 SAAW-----ASGGPWRLLWHRPAWPGALGGPERVTFHSTPGPKATVAASHLRVEFGGQAG 147
S+ +G P L GA G R T GP+ + A F G A
Sbjct: 1964 SSCQPCDCSGNGDPNLLFSDCDPLTGACRGCLR----HTTGPRCEICAPG----FYGNAL 2015
Query: 148 LAAAGLRGRCQCHGHAARCAARARPPR---CHCRHHTTGPGCESCRPSHRDWPWRPATPR 204
L G RC C C A P C C+ TG C+ C+ H +
Sbjct: 2016 LP--GNCTRCDC----TPCGTEACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGG--- 2066
Query: 205 HPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQ 264
C PC+C A + + G C CR T G C C PG+W P Q
Sbjct: 2067 ----CRPCACGPAAEGSECHPQ---------SGQCH-CRPGTMGPQCRECAPGYWGLPEQ 2112
Query: 265 PIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQ 313
CR CQC GG C+ +G+C C G++G C+ C +Q
Sbjct: 2113 ------GCRRCQC-----PGGRCDPHTGRCNCPPGLSGERCDTCSQQHQ 2150
Score = 75.5 bits (184), Expect = 1e-13
Identities = 56/194 (28%), Positives = 70/194 (36%), Gaps = 50/194 (25%)
Query: 144 GQAGLAAAGLRGRCQCHGHA-----ARCAA------RARP------------PRCHCRHH 180
G G G+C CH H +RCA RP +C C
Sbjct: 1444 GATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFPNCRPCDCGARLCDELTGQCICPPR 1503
Query: 181 TTGPGCESCRPSHRDWPWRPATPRHPHP---CLPCSCNQHARRCRFNSELFRLSGGRSGG 237
T P C C+P HP C C+C+ + EL + G
Sbjct: 1504 TIPPDCLLCQPQTFGC----------HPLVGCEECNCSGPGIQ-----ELTDPTCDTDSG 1548
Query: 238 VCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCK 297
C +CR + GR C C PGF P CR C CH G G C+ +GQC CK
Sbjct: 1549 QC-KCRPNVTGRRCDTCSPGFHGYPR--------CRPCDCHEAGTAPGVCDPLTGQCYCK 1599
Query: 298 LGVTGLTCNRCGPG 311
V G C++C G
Sbjct: 1600 ENVQGPKCDQCSLG 1613
Score = 73.6 bits (179), Expect = 4e-13
Identities = 43/140 (30%), Positives = 58/140 (41%), Gaps = 31/140 (22%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C CR H GP C+ C+P W +P +P C CSC+ G
Sbjct: 744 CMCRAHVEGPSCDRCKPGF----WG-LSPSNPEGCTRCSCDLR---------------GT 783
Query: 235 SGGVCER--------CRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGT 286
GGV E C+ H G+ C C+ GF+ F CR+C+C GA G +
Sbjct: 784 LGGVAECQPGTGQCFCKPHVCGQACASCKDGFFGLDQADYFG---CRSCRCDIGGALGQS 840
Query: 287 CNQTSGQCTCKLGVTGLTCN 306
C +G C C+ G TC+
Sbjct: 841 CEPRTGVCRCRPNTQGPTCS 860
Score = 73.2 bits (178), Expect = 5e-13
Identities = 50/166 (30%), Positives = 60/166 (36%), Gaps = 37/166 (22%)
Query: 157 CQCHGHAA-RCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHP------HPC 209
C C + A R +C CR TG C++C P ++P+ A HP P
Sbjct: 677 CHCSAEGSLHAACDPRSGQCSCRPRVTGLRCDTCVPGAYNFPYCEAGSCHPAGLAPVDPA 736
Query: 210 LPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWR-DPSQPIFS 268
LP V CR H G C C+PGFW PS P
Sbjct: 737 LP-----------------------EAQVPCMCRAHVEGPSCDRCKPGFWGLSPSNP--- 770
Query: 269 RRACRACQCHPIGATGGT--CNQTSGQCTCKLGVTGLTCNRCGPGY 312
C C C G GG C +GQC CK V G C C G+
Sbjct: 771 -EGCTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKDGF 815
Score = 72.8 bits (177), Expect = 7e-13
Identities = 58/200 (29%), Positives = 73/200 (36%), Gaps = 37/200 (18%)
Query: 143 GGQAGLAAAGLRGR----CQCHGHAARCAARARPP--RCHCRHHTTGPGCESCRPSHRDW 196
G L A G G CQC R P +C CR G C+ C P + +
Sbjct: 523 GTHCELCAPGFYGPGCQPCQCSSPGV-ADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHF 581
Query: 197 PWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQP 256
P P LP C++ A RC C+ AG HC C+P
Sbjct: 582 PLCQLCGCSPAGTLPEGCDE-AGRCL-------------------CQPEFAGPHCDRCRP 621
Query: 257 GFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSR 316
G+ P+ C+AC C P GA C G C C+ G TG C C PG+
Sbjct: 622 GYHGFPN--------CQACTCDPRGALDQLCG-AGGLCRCRPGYTGTACQECSPGFHGFP 672
Query: 317 SPRMPCQRIPEATTTLATTP 336
S +PC E + A P
Sbjct: 673 S-CVPCHCSAEGSLHAACDP 691
Score = 71.2 bits (173), Expect = 2e-12
Identities = 47/151 (31%), Positives = 55/151 (36%), Gaps = 31/151 (20%)
Query: 177 CRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC---SCNQHARRCRFNSELFRLSGG 233
C HTTGP CE C P P C PC +C+ H+ C
Sbjct: 1994 CLRHTTGPRCEICAPGFYGNALLPGNCTRCD-CTPCGTEACDPHSGHCL----------- 2041
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQ 293
C+ GR C CQ G + CR C C P A G C+ SGQ
Sbjct: 2042 --------CKAGVTGRRCDRCQEGHFG-----FDGCGGCRPCACGP-AAEGSECHPQSGQ 2087
Query: 294 CTCKLGVTGLTCNRCGPGYQQSRSPRMPCQR 324
C C+ G G C C PGY P C+R
Sbjct: 2088 CHCRPGTMGPQCRECAPGYW--GLPEQGCRR 2116
Score = 57.8 bits (138), Expect = 2e-08
Identities = 44/142 (30%), Positives = 53/142 (37%), Gaps = 32/142 (22%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
+C C H G C C + +P C PC C AR C EL
Sbjct: 1456 QCPCHAHVIGRDCSRCATGYWGFP----------NCRPCDCG--ARLC---DELT----- 1495
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGA---TGGTCNQT 290
G C C T C CQP + P+ C C C G T TC+
Sbjct: 1496 ---GQCI-CPPRTIPPDCLLCQPQTFG--CHPLVG---CEECNCSGPGIQELTDPTCDTD 1546
Query: 291 SGQCTCKLGVTGLTCNRCGPGY 312
SGQC C+ VTG C+ C PG+
Sbjct: 1547 SGQCKCRPNVTGRRCDTCSPGF 1568
Score = 55.8 bits (133), Expect = 8e-08
Identities = 23/50 (46%), Positives = 26/50 (52%)
Query: 263 SQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
S +F R C CH +GATG TC GQC C V G C+RC GY
Sbjct: 1426 SLSLFYNNGARPCGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGY 1475
Score = 44.3 bits (103), Expect = 3e-04
Identities = 40/137 (29%), Positives = 50/137 (36%), Gaps = 41/137 (29%)
Query: 236 GGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCT 295
GG C C H GR C C G+W P+ CR C C GA C++ +GQC
Sbjct: 1454 GGQCP-CHAHVIGRDCSRCATGYWGFPN--------CRPCDC---GAR--LCDELTGQCI 1499
Query: 296 CK---------------LGVTGLT----CNRCGPGYQQSRSPRM-----PCQRIPEATTT 331
C G L CN GPG Q+ P C+ P T
Sbjct: 1500 CPPRTIPPDCLLCQPQTFGCHPLVGCEECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGR 1559
Query: 332 LATT--PGAYSSDPQCQ 346
T PG + P+C+
Sbjct: 1560 RCDTCSPG-FHGYPRCR 1575
Score = 33.9 bits (76), Expect = 0.34
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 143 GGQAGLAAAGLRG--RCQ-CHGHAARCAARARPP---RCHCRHHTTGPGCESCRPSHRDW 196
G + + G G RC+ C H A A P +C+C+ + GP C+ C S +
Sbjct: 1558 GRRCDTCSPGFHGYPRCRPCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCDQC--SLGTF 1615
Query: 197 PWRPATPRHPHPCLPCSCNQHARRCRFNS 225
A P+ C C C RCR +S
Sbjct: 1616 SLDAANPKG---CTRCFCFGATERCRSSS 1641
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 125 bits (315), Expect = 7e-29
Identities = 64/181 (35%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 155 GRCQCHGHAARCAARARPP--RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC 212
G+C C+GHA C RC C+HHT G C+ C + WRPA H C C
Sbjct: 297 GQCVCNGHAEVCNINNPEKLFRCECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEAC 356
Query: 213 SCNQHARRCRFNSELFRLSGG-------RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQP 265
+C+ HA C ++ ++ R GGVC C+H+TAG +C C G++R P
Sbjct: 357 NCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVP 416
Query: 266 IFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRI 325
+ + C C C P A G C Q SG+C CK G C +C GY C RI
Sbjct: 417 VDAPDGCIPCSCDPEHADG--CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPF----CLRI 470
Query: 326 P 326
P
Sbjct: 471 P 471
Score = 95.9 bits (237), Expect = 7e-20
Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C C G C+ C P + +R + C+PC+CN H+ +C+ S
Sbjct: 1654 CACPPAYAGDSCQGCSPGY----YRDHKGLYTGRCVPCNCNGHSNQCQDGS--------- 1700
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIG--ATGGTCNQTSG 292
G+C C+H+TAG HC CQ G++ + +CRAC C ATG N
Sbjct: 1701 --GICVNCQHNTAGEHCERCQEGYYGNAVHG-----SCRACPCPHTNSFATGCVVNGGDV 1753
Query: 293 QCTCKLGVTGLTCNRCGPGY 312
+C+CK G TG C RC PGY
Sbjct: 1754 RCSCKAGYTGTQCERCAPGY 1773
Score = 72.0 bits (175), Expect = 1e-12
Identities = 51/168 (30%), Positives = 63/168 (37%), Gaps = 34/168 (20%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWP-----WRPATPRHPHPCLP----CSCN-----QHAR 219
RC CR GP C++CR +P W A + PC C C Q
Sbjct: 508 RCLCRPGVEGPRCDTCRSGFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCD 567
Query: 220 RCRFNSELFRLSGGRSG------------GVCERCRHHTAGRHCHYCQPGFWR-DPSQPI 266
RC + F G S G C+ C+ H G C C+ +W D P
Sbjct: 568 RCLSGAYDFPHCQGSSSACDPAGTINSNLGYCQ-CKLHVEGPTCSRCKLLYWNLDKENP- 625
Query: 267 FSRRACRACQCHPIGATGGT--CNQTSGQCTCKLGVTGLTCNRCGPGY 312
C C+CH G GT C Q G C CK V G +C+ C GY
Sbjct: 626 ---SGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGY 670
Score = 70.1 bits (170), Expect = 4e-12
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 157 CQCHG-HAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
C C HA C + RCHC+ + G CE C + ++P+ P P P S +
Sbjct: 426 CSCDPEHADGCEQGSG--RCHCKPNFHGDNCEKCAIGYYNFPFCLRIPIFP-VSTPSSED 482
Query: 216 QHA---RRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRAC 272
A + C N E + G C CR G C C+ GF+ P C
Sbjct: 483 PVAGDIKGCDCNLEGVLPEICDAHGRC-LCRPGVEGPRCDTCRSGFYSFP--------IC 533
Query: 273 RACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPG 311
+AC C +G+ C+ +GQC C+ GVTG C+RC G
Sbjct: 534 QACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSG 572
Score = 66.6 bits (161), Expect = 5e-11
Identities = 43/139 (30%), Positives = 53/139 (38%), Gaps = 23/139 (16%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHP-CLPCSCNQHARRCRFNSELFRLSG 232
+C C T P CE C + HP C C+C++ R E
Sbjct: 1325 QCRCPPRTVRPQCEVCETHSFSF--------HPMAGCEGCNCSR-----RGTIEAAMPEC 1371
Query: 233 GRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSG 292
R G C RC+ GR C C GF+R P C C C+ G G C+ +G
Sbjct: 1372 DRDSGQC-RCKPRITGRQCDRCASGFYRFPE--------CVPCNCNRDGTEPGVCDPGTG 1422
Query: 293 QCTCKLGVTGLTCNRCGPG 311
C CK V G CN C G
Sbjct: 1423 ACLCKENVEGTECNVCREG 1441
Score = 63.2 bits (152), Expect = 5e-10
Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 29/158 (18%)
Query: 159 CHGHAARC----AARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC 214
C G ++ C + C C+ H GP C C+ + W +P C C C
Sbjct: 579 CQGSSSACDPAGTINSNLGYCQCKLHVEGPTCSRCKLLY----WN-LDKENPSGCSECKC 633
Query: 215 NQHAR-----RCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSR 269
++ CR + G C C+ H G C C+ G++ F
Sbjct: 634 HKAGTVSGTGECR-----------QGDGDCH-CKSHVGGDSCDTCEDGYFALEKSNYFG- 680
Query: 270 RACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNR 307
C+ CQC GA C+ SG C C+ V G C R
Sbjct: 681 --CQGCQCDIGGALSSMCSGPSGVCQCREHVVGKVCQR 716
Score = 62.4 bits (150), Expect = 9e-10
Identities = 52/188 (27%), Positives = 67/188 (35%), Gaps = 40/188 (21%)
Query: 157 CQCHGHAA---RCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCS 213
C+CH A C+ +C C+ + G C C H +P C PCS
Sbjct: 1266 CECHPTGATGPHCSPEGG--QCPCQPNVIGRQCTRCATGHYGFP----------RCKPCS 1313
Query: 214 CNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACR 273
C + R C G C RC T C C+ S C
Sbjct: 1314 CGR--RLCE-----------EMTGQC-RCPPRTVRPQCEVCETH-----SFSFHPMAGCE 1354
Query: 274 ACQCHPIG---ATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPR-MPCQRIPEAT 329
C C G A C++ SGQC CK +TG C+RC G+ R P +PC + T
Sbjct: 1355 GCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCASGFY--RFPECVPCNCNRDGT 1412
Query: 330 TTLATTPG 337
PG
Sbjct: 1413 EPGVCDPG 1420
Score = 53.1 bits (126), Expect = 5e-07
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 267 FSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPR-MPC--- 322
F + C+CHP GATG C+ GQC C+ V G C RC G+ PR PC
Sbjct: 1258 FYHKGALPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHY--GFPRCKPCSCG 1315
Query: 323 QRIPEATTTLATTPGAYSSDPQCQ 346
+R+ E T P + PQC+
Sbjct: 1316 RRLCEEMTGQCRCP-PRTVRPQCE 1338
Score = 51.6 bits (122), Expect = 2e-06
Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 25/141 (17%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC-- 214
C C+GH+ +C +C+H+T G CE C+ + H C C C
Sbjct: 1687 CNCNGHSNQC-QDGSGICVNCQHNTAGEHCERCQEGYY------GNAVH-GSCRACPCPH 1738
Query: 215 -NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACR 273
N A C N G V C+ G C C PG++ +P + +C+
Sbjct: 1739 TNSFATGCVVN----------GGDVRCSCKAGYTGTQCERCAPGYFGNPQK---FGGSCQ 1785
Query: 274 ACQCHPIGATGGTCNQTSGQC 294
C C+ G G+C+ +G C
Sbjct: 1786 PCSCNSNGQL-GSCHPLTGDC 1805
Score = 40.4 bits (93), Expect = 0.004
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 144 GQAGLAAAGLRGRCQC---HGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRP 200
G G A G C C + A C RC C+ TG CE C P + P
Sbjct: 1721 GYYGNAVHGSCRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNP--- 1777
Query: 201 ATPRHPHPCLPCSCNQHAR 219
+ C PCSCN + +
Sbjct: 1778 --QKFGGSCQPCSCNSNGQ 1794
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 125 bits (315), Expect = 7e-29
Identities = 64/181 (35%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 155 GRCQCHGHAARCAARARPP--RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC 212
G+C C+GHA C RC C+HHT G C+ C + WRPA H C C
Sbjct: 297 GQCVCNGHAEVCNINNPEKLFRCECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEAC 356
Query: 213 SCNQHARRCRFNSELFRLSGG-------RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQP 265
+C+ HA C ++ ++ R GGVC C+H+TAG +C C G++R P
Sbjct: 357 NCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVP 416
Query: 266 IFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRI 325
+ + C C C P A G C Q SG+C CK G C +C GY C RI
Sbjct: 417 VDAPDGCIPCSCDPEHADG--CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPF----CLRI 470
Query: 326 P 326
P
Sbjct: 471 P 471
Score = 95.9 bits (237), Expect = 7e-20
Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C C G C+ C P + +R + C+PC+CN H+ +C+ S
Sbjct: 1654 CACPPAYAGDSCQGCSPGY----YRDHKGLYTGRCVPCNCNGHSNQCQDGS--------- 1700
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIG--ATGGTCNQTSG 292
G+C C+H+TAG HC CQ G++ + +CRAC C ATG N
Sbjct: 1701 --GICVNCQHNTAGEHCERCQEGYYGNAVHG-----SCRACPCPHTNSFATGCVVNGGDV 1753
Query: 293 QCTCKLGVTGLTCNRCGPGY 312
+C+CK G TG C RC PGY
Sbjct: 1754 RCSCKAGYTGTQCERCAPGY 1773
Score = 72.0 bits (175), Expect = 1e-12
Identities = 51/168 (30%), Positives = 63/168 (37%), Gaps = 34/168 (20%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWP-----WRPATPRHPHPCLP----CSCN-----QHAR 219
RC CR GP C++CR +P W A + PC C C Q
Sbjct: 508 RCLCRPGVEGPRCDTCRSGFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCD 567
Query: 220 RCRFNSELFRLSGGRSG------------GVCERCRHHTAGRHCHYCQPGFWR-DPSQPI 266
RC + F G S G C+ C+ H G C C+ +W D P
Sbjct: 568 RCLSGAYDFPHCQGSSSACDPAGTINSNLGYCQ-CKLHVEGPTCSRCKLLYWNLDKENP- 625
Query: 267 FSRRACRACQCHPIGATGGT--CNQTSGQCTCKLGVTGLTCNRCGPGY 312
C C+CH G GT C Q G C CK V G +C+ C GY
Sbjct: 626 ---SGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGY 670
Score = 70.1 bits (170), Expect = 4e-12
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 157 CQCHG-HAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
C C HA C + RCHC+ + G CE C + ++P+ P P P S +
Sbjct: 426 CSCDPEHADGCEQGSG--RCHCKPNFHGDNCEKCAIGYYNFPFCLRIPIFP-VSTPSSED 482
Query: 216 QHA---RRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRAC 272
A + C N E + G C CR G C C+ GF+ P C
Sbjct: 483 PVAGDIKGCDCNLEGVLPEICDAHGRC-LCRPGVEGPRCDTCRSGFYSFP--------IC 533
Query: 273 RACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPG 311
+AC C +G+ C+ +GQC C+ GVTG C+RC G
Sbjct: 534 QACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSG 572
Score = 66.6 bits (161), Expect = 5e-11
Identities = 43/139 (30%), Positives = 53/139 (38%), Gaps = 23/139 (16%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHP-CLPCSCNQHARRCRFNSELFRLSG 232
+C C T P CE C + HP C C+C++ R E
Sbjct: 1325 QCRCPPRTVRPQCEVCETHSFSF--------HPMAGCEGCNCSR-----RGTIEAAMPEC 1371
Query: 233 GRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSG 292
R G C RC+ GR C C GF+R P C C C+ G G C+ +G
Sbjct: 1372 DRDSGQC-RCKPRITGRQCDRCASGFYRFPE--------CVPCNCNRDGTEPGVCDPGTG 1422
Query: 293 QCTCKLGVTGLTCNRCGPG 311
C CK V G CN C G
Sbjct: 1423 ACLCKENVEGTECNVCREG 1441
Score = 63.2 bits (152), Expect = 5e-10
Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 29/158 (18%)
Query: 159 CHGHAARC----AARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC 214
C G ++ C + C C+ H GP C C+ + W +P C C C
Sbjct: 579 CQGSSSACDPAGTINSNLGYCQCKLHVEGPTCSRCKLLY----WN-LDKENPSGCSECKC 633
Query: 215 NQHAR-----RCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSR 269
++ CR + G C C+ H G C C+ G++ F
Sbjct: 634 HKAGTVSGTGECR-----------QGDGDCH-CKSHVGGDSCDTCEDGYFALEKSNYFG- 680
Query: 270 RACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNR 307
C+ CQC GA C+ SG C C+ V G C R
Sbjct: 681 --CQGCQCDIGGALSSMCSGPSGVCQCREHVVGKVCQR 716
Score = 62.4 bits (150), Expect = 9e-10
Identities = 52/188 (27%), Positives = 67/188 (35%), Gaps = 40/188 (21%)
Query: 157 CQCHGHAA---RCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCS 213
C+CH A C+ +C C+ + G C C H +P C PCS
Sbjct: 1266 CECHPTGATGPHCSPEGG--QCPCQPNVIGRQCTRCATGHYGFP----------RCKPCS 1313
Query: 214 CNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACR 273
C + R C G C RC T C C+ S C
Sbjct: 1314 CGR--RLCE-----------EMTGQC-RCPPRTVRPQCEVCETH-----SFSFHPMAGCE 1354
Query: 274 ACQCHPIG---ATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPR-MPCQRIPEAT 329
C C G A C++ SGQC CK +TG C+RC G+ R P +PC + T
Sbjct: 1355 GCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCASGFY--RFPECVPCNCNRDGT 1412
Query: 330 TTLATTPG 337
PG
Sbjct: 1413 EPGVCDPG 1420
Score = 53.1 bits (126), Expect = 5e-07
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 267 FSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPR-MPC--- 322
F + C+CHP GATG C+ GQC C+ V G C RC G+ PR PC
Sbjct: 1258 FYHKGALPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHY--GFPRCKPCSCG 1315
Query: 323 QRIPEATTTLATTPGAYSSDPQCQ 346
+R+ E T P + PQC+
Sbjct: 1316 RRLCEEMTGQCRCP-PRTVRPQCE 1338
Score = 51.6 bits (122), Expect = 2e-06
Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 25/141 (17%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC-- 214
C C+GH+ +C +C+H+T G CE C+ + H C C C
Sbjct: 1687 CNCNGHSNQC-QDGSGICVNCQHNTAGEHCERCQEGYY------GNAVH-GSCRACPCPH 1738
Query: 215 -NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACR 273
N A C N G V C+ G C C PG++ +P + +C+
Sbjct: 1739 TNSFATGCVVN----------GGDVRCSCKAGYTGTQCERCAPGYFGNPQK---FGGSCQ 1785
Query: 274 ACQCHPIGATGGTCNQTSGQC 294
C C+ G G+C+ +G C
Sbjct: 1786 PCSCNSNGQL-GSCHPLTGDC 1805
Score = 40.4 bits (93), Expect = 0.004
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 144 GQAGLAAAGLRGRCQC---HGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRP 200
G G A G C C + A C RC C+ TG CE C P + P
Sbjct: 1721 GYYGNAVHGSCRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNP--- 1777
Query: 201 ATPRHPHPCLPCSCNQHAR 219
+ C PCSCN + +
Sbjct: 1778 --QKFGGSCQPCSCNSNGQ 1794
>gi|164414431 netrin G1 isoform 1 [Homo sapiens]
Length = 539
Score = 122 bits (307), Expect = 6e-28
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 20/171 (11%)
Query: 153 LRGRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPAT----PR-HPH 207
+RGRC+C+ HA C C C H+TTGP C C+ +++ PW P + P+ +
Sbjct: 293 VRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTAN 352
Query: 208 PCLP-------CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWR 260
C+P C C H+ RC + L + +C C+H+T G+HC C+ G++R
Sbjct: 353 TCIPSISSIGNCECFGHSNRCSYIDLLNTV-------ICVSCKHNTRGQHCELCRLGYFR 405
Query: 261 DPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPG 311
+ S + C C C+P+G+ CN SG C CK G TG C+ C PG
Sbjct: 406 NASAQLDDENVCIECYCNPLGSIHDRCN-GSGFCECKTGTTGPKCDECLPG 455
Score = 33.5 bits (75), Expect = 0.45
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCR-----FNSELFR 229
C C+ TTGP C+ C P + W + C P C+ C+ N+
Sbjct: 438 CECKTGTTGPKCDECLPGN---SWH-------YGCQPNVCDNELLHCQNGGTCHNNVRCL 487
Query: 230 LSGGRSGGVCERCRHHTAG 248
+G +CE+ R AG
Sbjct: 488 CPAAYTGILCEKLRCEEAG 506
Score = 29.6 bits (65), Expect = 6.5
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 275 CQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRIPEATTTLAT 334
C+C+ + AT + + C C+ TG C +C YQ P P +P T T
Sbjct: 297 CKCN-LHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQ--GRPWSPGSYLPIPKGTANT 353
Query: 335 TPGAYSSDPQCQ--------NYCNMSDTRVHMSLRRYCQQDH 368
+ SS C+ +Y ++ +T + +S + + H
Sbjct: 354 CIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQH 395
>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
Length = 3075
Score = 122 bits (305), Expect = 1e-27
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 155 GRCQCHGHAARCA--ARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC 212
G C C+GHA+ C + +C C H+T G C C P + PWRP T + C C
Sbjct: 268 GMCICYGHASSCPWDETTKKLQCQCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEAC 327
Query: 213 SCNQHARRCRFNSELFRLSGG-------RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQP 265
+C+ A+ C ++ + + R GGVC C +T G +C C G++R
Sbjct: 328 NCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKVS 387
Query: 266 IFSRRACRACQCHPIGATGGTC-----------NQTSGQCTCKLGVTGLTCNRCGPGYQ 313
+ CR C C P+G+ C + GQC CK G TG C+RC GY+
Sbjct: 388 PYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYK 446
Score = 92.4 bits (228), Expect = 8e-19
Identities = 63/218 (28%), Positives = 80/218 (36%), Gaps = 62/218 (28%)
Query: 147 GLAAAGLRGRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHP 206
G+ G+ C+CHGHAA C C H+TTG CE C P P R P
Sbjct: 732 GILFGGICQPCECHGHAAECNVHG--VCIACAHNTTGVHCEQCLPGFYGEPSRGT----P 785
Query: 207 HPCLPCSC------NQHARRCRFNSE----LFRLSGGRSGGVCERCRH------------ 244
C PC+C N + C N + G SG CERC
Sbjct: 786 GDCQPCACPLTIASNNFSPTCHLNDGDEVVCDWCAPGYSGAWCERCADGYYGNPTVPGES 845
Query: 245 ------------------------------HTAGRHCHYCQPGFWRDPSQPIFSRRACRA 274
+T G HC C GF+ D + + CRA
Sbjct: 846 CVPCDCSGNVDPSEAGHCDSVTGECLKCLGNTDGAHCERCADGFYGDA----VTAKNCRA 901
Query: 275 CQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
C+CH G+ C+ +G C CK VTG C++C GY
Sbjct: 902 CECHVKGSHSAVCHLETGLCDCKPNVTGQQCDQCLHGY 939
Score = 87.0 bits (214), Expect = 3e-17
Identities = 49/186 (26%), Positives = 70/186 (37%), Gaps = 53/186 (28%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHP----CLPCSCNQHARRCRFNSELFRL 230
C C T G C+ C P + + R P P C+PCSCN H+ C N+
Sbjct: 1362 CVCPPGTVGFSCQDCAPGYHRGKLPAGSDRGPRPLVAPCVPCSCNNHSDTCDPNTGKCLN 1421
Query: 231 SGGRSGG----------------------------------------------VCERCRH 244
G + G C+ C
Sbjct: 1422 CGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRCDACLL 1481
Query: 245 HTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLT 304
G+HC C ++ +P P +C+ C C+P G+ G C++TSGQC C+LG +GL
Sbjct: 1482 GYEGKHCERCSSSYYGNPQTP---GGSCQKCDCNPHGSVHGDCDRTSGQCVCRLGASGLR 1538
Query: 305 CNRCGP 310
C+ C P
Sbjct: 1539 CDECEP 1544
Score = 74.7 bits (182), Expect = 2e-13
Identities = 47/145 (32%), Positives = 60/145 (41%), Gaps = 25/145 (17%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C C TG CESC + +R C PC C+ HA C +
Sbjct: 709 CECPQGYTGTSCESCLSGY----YRVDGILFGGICQPCECHGHAAECNVH---------- 754
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGG---TCNQTS 291
GVC C H+T G HC C PGF+ +PS+ + C+ C C A+ TC+
Sbjct: 755 --GVCIACAHNTTGVHCEQCLPGFYGEPSRG--TPGDCQPCACPLTIASNNFSPTCHLND 810
Query: 292 GQ---CT-CKLGVTGLTCNRCGPGY 312
G C C G +G C RC GY
Sbjct: 811 GDEVVCDWCAPGYSGAWCERCADGY 835
Score = 67.4 bits (163), Expect = 3e-11
Identities = 47/196 (23%), Positives = 71/196 (36%), Gaps = 54/196 (27%)
Query: 157 CQCH---GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCS 213
C+CH H+A C C C+ + TG C+ C + H C PC+
Sbjct: 902 CECHVKGSHSAVC--HLETGLCDCKPNVTGQQCDQCLHGYYGLD-------SGHGCRPCN 952
Query: 214 CN---QHARRCRFNSELFRLSGGRSGGVCERCRH-------------------------- 244
C+ + C + + G +G C+RC H
Sbjct: 953 CSVAGSVSDGCTDEGQCHCVPGV-AGKRCDRCAHGFYAYQDGSCTPCDCPHTQNTCDPET 1011
Query: 245 -------HTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCK 297
HT G C C+ G W ++ C+AC C +G+T C+ +G C CK
Sbjct: 1012 GECVCPPHTQGVKCEECEDGHWGYDAEV-----GCQACNCSLVGSTHHRCDVVTGHCQCK 1066
Query: 298 LGVTGLTCNRCGPGYQ 313
G C++C GY+
Sbjct: 1067 SKFGGRACDQCSLGYR 1082
Score = 53.1 bits (126), Expect = 5e-07
Identities = 41/149 (27%), Positives = 51/149 (34%), Gaps = 39/149 (26%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN---QHARRCRFNSELFRLS 231
C C HT G CE C H W + C C+C+ RC +
Sbjct: 1014 CVCPPHTQGVKCEECEDGH--WGYDAEVG-----CQACNCSLVGSTHHRCDVVT------ 1060
Query: 232 GGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCN--- 288
G C+ C+ GR C C G+ P C C C G +G CN
Sbjct: 1061 -----GHCQ-CKSKFGGRACDQCSLGYRDFPD--------CVPCDCDLRGTSGDACNLEQ 1106
Query: 289 ------QTSGQCTCKLGVTGLTCNRCGPG 311
+ +G C CK V G CN C G
Sbjct: 1107 GLCGCVEETGACPCKENVFGPQCNECREG 1135
Score = 49.3 bits (116), Expect = 8e-06
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 26/151 (17%)
Query: 171 RPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRL 230
+P +C C+ TG C+ C+ ++D+P C+ C CN +
Sbjct: 423 QPGQCPCKEGYTGEKCDRCQLGYKDYP----------TCVSCGCN----------PVGSA 462
Query: 231 SGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQT 290
S G C C+ + G+ C C+PGF+ + + R C C C + + +
Sbjct: 463 SDEPCTGPCV-CKENVEGKACDRCKPGFYNLKEK---NPRGCSECFCFGVSDVCSSLSWP 518
Query: 291 SGQCTCKLG--VTGLTCNRCGPGYQQSRSPR 319
GQ G VT L R P Q + R
Sbjct: 519 VGQVNSMSGWLVTDLISPRKIPSQQDALGGR 549
Score = 40.4 bits (93), Expect = 0.004
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 239 CERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKL 298
CE C G C C G++R I C+ C+CH A CN C
Sbjct: 709 CE-CPQGYTGTSCESCLSGYYRVDG--ILFGGICQPCECHGHAAE---CNVHGVCIACAH 762
Query: 299 GVTGLTCNRCGPGY--QQSRSPRMPCQ 323
TG+ C +C PG+ + SR CQ
Sbjct: 763 NTTGVHCEQCLPGFYGEPSRGTPGDCQ 789
Score = 33.1 bits (74), Expect = 0.59
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 293 QCTCKLGVTGLTCNRCGPGYQQ 314
QC C+ G +CNRC PGY Q
Sbjct: 289 QCQCEHNTCGESCNRCCPGYHQ 310
Score = 32.0 bits (71), Expect = 1.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 294 CTCKLGVTGLTCNRCGPGYQQSRSP 318
C C G G +C C PGY + + P
Sbjct: 1362 CVCPPGTVGFSCQDCAPGYHRGKLP 1386
Score = 29.3 bits (64), Expect = 8.5
Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 159 CHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHA 218
C+ C C C+ + GP C CR +P C PC C+ +
Sbjct: 1102 CNLEQGLCGCVEETGACPCKENVFGPQCNECREG-----TFALRADNPLGCSPCFCSGLS 1156
Query: 219 RRC 221
C
Sbjct: 1157 HLC 1159
>gi|190014607 netrin G2 [Homo sapiens]
Length = 530
Score = 115 bits (287), Expect = 1e-25
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 155 GRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWR-----PATPRHPHPC 209
GRC+C+ HA C+ R +C C H+TTGP C C+ + R WR P P+ C
Sbjct: 285 GRCKCNLHANLCSMREGSLQCECEHNTTGPDCGKCKKNFRTRSWRAGSYLPLPHGSPNAC 344
Query: 210 LP------CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPS 263
C C H+ RC + L ++ C C+H+T G+HC +C+ G++R+ S
Sbjct: 345 ATAGSFGNCECYGHSNRCSYIDFLNVVT-------CVSCKHNTRGQHCQHCRLGYYRNGS 397
Query: 264 QPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGP 310
+ C C C+ IG+ CN+T G C C+ G G C+ C P
Sbjct: 398 AELDDENVCIECNCNQIGSVHDRCNET-GFCECREGAAGPKCDDCLP 443
Score = 79.7 bits (195), Expect = 5e-15
Identities = 70/234 (29%), Positives = 91/234 (38%), Gaps = 45/234 (19%)
Query: 124 HSTPGP-----------KATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCA--ARA 170
H+T GP ++ A S+L + G A AG G C+C+GH+ RC+
Sbjct: 309 HNTTGPDCGKCKKNFRTRSWRAGSYLPLPHGSPNACATAGSFGNCECYGHSNRCSYIDFL 368
Query: 171 RPPRC-HCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHAR---RCRFNSE 226
C C+H+T G C+ CR + + A + C+ C+CNQ RC
Sbjct: 369 NVVTCVSCKHNTRGQHCQHCRLGY--YRNGSAELDDENVCIECNCNQIGSVHDRC----- 421
Query: 227 LFRLSGGRSGGVCERCRHHTAGRHCHYCQP-GFWRDPSQPIFSRRACRACQCHPIGATGG 285
G CE CR AG C C P +WR P CQ GG
Sbjct: 422 -------NETGFCE-CREGAAGPKCDDCLPTHYWRQGCYPNVCDDDQLLCQ------NGG 467
Query: 286 TCNQTSGQCTCKLGVTGLTCN--RCGPGYQQSRSPRMPCQRIPEATTTLATTPG 337
TC Q +C C G TG+ C RC P + C R P A AT G
Sbjct: 468 TCLQNQ-RCACPRGYTGVRCEQPRCDPADDDG---GLDCDRAPGAAPRPATLLG 517
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 114 bits (286), Expect = 2e-25
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 155 GRCQCHGHAARCAA--RARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC 212
G C C+GHA C RC C H+T G C+ C P PWR T C C
Sbjct: 285 GMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEAC 344
Query: 213 SCNQHARRCRFNSELFRLS-----GGR--SGGVCERCRHHTAGRHCHYCQPGFWRDPSQP 265
+C+ A C ++ + R + G+ GGVC C +TAG +C C GF+R
Sbjct: 345 NCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGVS 404
Query: 266 IFSRRACRACQCHPIGATGGTC---------NQTSGQCTCKLGVTGLTCNRCGPGY 312
R C+ C C PIG+ C G C CK G G++C+RC GY
Sbjct: 405 PNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGY 460
Score = 86.7 bits (213), Expect = 4e-17
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 138 LRVEFGGQAGLAAAGLRGRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWP 197
LR + GG+ G CQC+GH++ C + +C+HHT G CE C +
Sbjct: 1401 LRSQPGGRTPGPTLGTCVPCQCNGHSSLCDPETSICQ-NCQHHTAGDFCERCALGYYG-- 1457
Query: 198 WRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPG 257
P+ C C+C + F+ ++ G C C G++C C PG
Sbjct: 1458 ---IVKGLPNDCQQCACPLISSSNNFSPSC--VAEGLDDYRCTACPRGYEGQYCERCAPG 1512
Query: 258 FWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRC 308
+ P P S C+ C+C P G+ C+ +G CTC+ G TG C+ C
Sbjct: 1513 YTGSPGNPGGS---CQECECDPYGSLPVPCDPVTGFCTCRPGATGRKCDGC 1560
Score = 83.2 bits (204), Expect = 5e-16
Identities = 56/186 (30%), Positives = 73/186 (39%), Gaps = 25/186 (13%)
Query: 147 GLAAAGLRGRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHP 206
G G+ CQC GHA C +C+ HT GP C+ C P P T
Sbjct: 747 GTIFGGICEPCQCFGHAESC-DDVTGECLNCKDHTGGPYCDKCLPGFYGEP----TKGTS 801
Query: 207 HPCLPCSC------NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWR 260
C PC+C N + C + L G +C+ C G C C G++
Sbjct: 802 EDCQPCACPLNIPSNNFSPTCHLDRSL--------GLICDGCPVGYTGPRCERCAEGYFG 853
Query: 261 DPSQPIFSRRACRACQCHP--IGATGGTCNQTSGQC-TCKLGVTGLTCNRCGPGYQQSRS 317
PS P +C+ CQC+ + G+C+ SG C CK G TG C C GY
Sbjct: 854 QPSVP---GGSCQPCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAV 910
Query: 318 PRMPCQ 323
CQ
Sbjct: 911 DAKNCQ 916
Score = 72.4 bits (176), Expect = 9e-13
Identities = 53/179 (29%), Positives = 70/179 (39%), Gaps = 29/179 (16%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C C TG CESC P HR R C PC C HA C +
Sbjct: 724 CQCPPGYTGSSCESCWPRHR----RVNGTIFGGICEPCQCFGHAESCDDVT--------- 770
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQC 294
G C C+ HT G +C C PGF+ +P++ + C+ C C P+ +
Sbjct: 771 --GECLNCKDHTGGPYCDKCLPGFYGEPTKG--TSEDCQPCAC-PLNIPSNNFSP----- 820
Query: 295 TCKLGVT-GLTCNRCGPGYQQSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMS 352
TC L + GL C+ C GY R C+R E + PG QC + + S
Sbjct: 821 TCHLDRSLGLICDGCPVGYTGPR-----CERCAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
Score = 67.0 bits (162), Expect = 4e-11
Identities = 47/162 (29%), Positives = 64/162 (39%), Gaps = 27/162 (16%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHP----CLPCSCNQHARRCRFNSELFR 229
+C C +G CE+C P +P R P P C+PC CN H+ C +
Sbjct: 1379 KCDCPLGYSGLSCEACLPGFYRLRSQPGG-RTPGPTLGTCVPCQCNGHSSLCDPETS--- 1434
Query: 230 LSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQ 289
+C+ C+HHTAG C C G++ C+ C C I ++
Sbjct: 1435 --------ICQNCQHHTAGDFCERCALGYYGIVKG---LPNDCQQCACPLISSSNNFSPS 1483
Query: 290 TSGQ------CT-CKLGVTGLTCNRCGPGYQQS-RSPRMPCQ 323
+ CT C G G C RC PGY S +P CQ
Sbjct: 1484 CVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQ 1525
Score = 66.6 bits (161), Expect = 5e-11
Identities = 52/240 (21%), Positives = 84/240 (35%), Gaps = 52/240 (21%)
Query: 157 CQCH-GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
C+C+ G + ++ +C CR + G C+ C+ + C+PC+CN
Sbjct: 918 CRCNAGGSFSEVCHSQTGQCECRANVQGQRCDKCKAGTFGL-------QSARGCVPCNCN 970
Query: 216 QHARR---CRFNSELFRLSGGRSGGVCERCRH---------------------------- 244
+ C + + + G +G C+RC H
Sbjct: 971 SFGSKSFDCEESGQCW-CQPGVTGKKCDRCAHGYFNFQEGGCTACECSHLGNNCDPKTGR 1029
Query: 245 -----HTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLG 299
+T G C C P W C+AC C +G+ CN +GQC C
Sbjct: 1030 CICPPNTIGEKCSKCAPNTWGHSITT-----GCKACNCSTVGSLDFQCNVNTGQCNCHPK 1084
Query: 300 VTGLTCNRCGPGYQQSRSPRMPCQRIP--EATTTLATTPGAYSSDPQCQNYCNMSDTRVH 357
+G C C G+ + +P +ATT + T SD Q C ++ +H
Sbjct: 1085 FSGAKCTECSRGHWNYPRCNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIH 1144
Score = 63.9 bits (154), Expect = 3e-10
Identities = 46/167 (27%), Positives = 60/167 (35%), Gaps = 41/167 (24%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQ 216
C+C C + RC C +T G C C P+ W T C C+C+
Sbjct: 1014 CECSHLGNNCDPKTG--RCICPPNTIGEKCSKCAPN--TWGHSITTG-----CKACNCST 1064
Query: 217 HAR---RCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACR 273
+C N+ G C C +G C C G W P C
Sbjct: 1065 VGSLDFQCNVNT-----------GQCN-CHPKFSGAKCTECSRGHWNYPR--------CN 1104
Query: 274 ACQCHPIGATGGTCNQTS---------GQCTCKLGVTGLTCNRCGPG 311
C C G TC+ + GQCTCK+ V G+ C+RC PG
Sbjct: 1105 LCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPG 1151
Score = 38.1 bits (87), Expect = 0.018
Identities = 42/186 (22%), Positives = 58/186 (31%), Gaps = 74/186 (39%)
Query: 157 CQCHGHAARCAARARPPR-----------------CHCRHHTTGPGCESCRPSHRDWPWR 199
C CHG A C R +C +T G CE+C D +R
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCT----DGFFR 399
Query: 200 P--ATPRHPHPCLPCSCN-------------QHARRCRFNSELFRLSGGRSGGV-CERC- 242
P +P +P PC PC C+ +HARR +G GGV C+RC
Sbjct: 400 PKGVSPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTG--FGGVSCDRCA 457
Query: 243 -------------------------------RHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
+ + G C C+ GF+ + +
Sbjct: 458 RGYTGYPDCKACNCSGLGSKNEDPCFGPCICKENVEGGDCSRCKSGFFNLQED---NWKG 514
Query: 272 CRACQC 277
C C C
Sbjct: 515 CDECFC 520
Score = 35.4 bits (80), Expect = 0.12
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 293 QCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRIPEAT--TTLATTPGAYSS--DPQ---C 345
+C C LG +GL+C C PG+ + RS P R P T T + +SS DP+ C
Sbjct: 1379 KCDCPLGYSGLSCEACLPGFYRLRS--QPGGRTPGPTLGTCVPCQCNGHSSLCDPETSIC 1436
Query: 346 QN 347
QN
Sbjct: 1437 QN 1438
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 114 bits (286), Expect = 2e-25
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 155 GRCQCHGHAARCAA--RARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPC 212
G C C+GHA C RC C H+T G C+ C P PWR T C C
Sbjct: 285 GMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEAC 344
Query: 213 SCNQHARRCRFNSELFRLS-----GGR--SGGVCERCRHHTAGRHCHYCQPGFWRDPSQP 265
+C+ A C ++ + R + G+ GGVC C +TAG +C C GF+R
Sbjct: 345 NCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGVS 404
Query: 266 IFSRRACRACQCHPIGATGGTC---------NQTSGQCTCKLGVTGLTCNRCGPGY 312
R C+ C C PIG+ C G C CK G G++C+RC GY
Sbjct: 405 PNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGY 460
Score = 86.7 bits (213), Expect = 4e-17
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 138 LRVEFGGQAGLAAAGLRGRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWP 197
LR + GG+ G CQC+GH++ C + +C+HHT G CE C +
Sbjct: 1401 LRSQPGGRTPGPTLGTCVPCQCNGHSSLCDPETSICQ-NCQHHTAGDFCERCALGYYG-- 1457
Query: 198 WRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPG 257
P+ C C+C + F+ ++ G C C G++C C PG
Sbjct: 1458 ---IVKGLPNDCQQCACPLISSSNNFSPSC--VAEGLDDYRCTACPRGYEGQYCERCAPG 1512
Query: 258 FWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRC 308
+ P P S C+ C+C P G+ C+ +G CTC+ G TG C+ C
Sbjct: 1513 YTGSPGNPGGS---CQECECDPYGSLPVPCDPVTGFCTCRPGATGRKCDGC 1560
Score = 83.2 bits (204), Expect = 5e-16
Identities = 56/186 (30%), Positives = 73/186 (39%), Gaps = 25/186 (13%)
Query: 147 GLAAAGLRGRCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHP 206
G G+ CQC GHA C +C+ HT GP C+ C P P T
Sbjct: 747 GTIFGGICEPCQCFGHAESC-DDVTGECLNCKDHTGGPYCDKCLPGFYGEP----TKGTS 801
Query: 207 HPCLPCSC------NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWR 260
C PC+C N + C + L G +C+ C G C C G++
Sbjct: 802 EDCQPCACPLNIPSNNFSPTCHLDRSL--------GLICDGCPVGYTGPRCERCAEGYFG 853
Query: 261 DPSQPIFSRRACRACQCHP--IGATGGTCNQTSGQC-TCKLGVTGLTCNRCGPGYQQSRS 317
PS P +C+ CQC+ + G+C+ SG C CK G TG C C GY
Sbjct: 854 QPSVP---GGSCQPCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAV 910
Query: 318 PRMPCQ 323
CQ
Sbjct: 911 DAKNCQ 916
Score = 72.4 bits (176), Expect = 9e-13
Identities = 53/179 (29%), Positives = 70/179 (39%), Gaps = 29/179 (16%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C C TG CESC P HR R C PC C HA C +
Sbjct: 724 CQCPPGYTGSSCESCWPRHR----RVNGTIFGGICEPCQCFGHAESCDDVT--------- 770
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQC 294
G C C+ HT G +C C PGF+ +P++ + C+ C C P+ +
Sbjct: 771 --GECLNCKDHTGGPYCDKCLPGFYGEPTKG--TSEDCQPCAC-PLNIPSNNFSP----- 820
Query: 295 TCKLGVT-GLTCNRCGPGYQQSRSPRMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMS 352
TC L + GL C+ C GY R C+R E + PG QC + + S
Sbjct: 821 TCHLDRSLGLICDGCPVGYTGPR-----CERCAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
Score = 67.0 bits (162), Expect = 4e-11
Identities = 47/162 (29%), Positives = 64/162 (39%), Gaps = 27/162 (16%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHP----CLPCSCNQHARRCRFNSELFR 229
+C C +G CE+C P +P R P P C+PC CN H+ C +
Sbjct: 1379 KCDCPLGYSGLSCEACLPGFYRLRSQPGG-RTPGPTLGTCVPCQCNGHSSLCDPETS--- 1434
Query: 230 LSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQ 289
+C+ C+HHTAG C C G++ C+ C C I ++
Sbjct: 1435 --------ICQNCQHHTAGDFCERCALGYYGIVKG---LPNDCQQCACPLISSSNNFSPS 1483
Query: 290 TSGQ------CT-CKLGVTGLTCNRCGPGYQQS-RSPRMPCQ 323
+ CT C G G C RC PGY S +P CQ
Sbjct: 1484 CVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQ 1525
Score = 66.6 bits (161), Expect = 5e-11
Identities = 52/240 (21%), Positives = 84/240 (35%), Gaps = 52/240 (21%)
Query: 157 CQCH-GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCN 215
C+C+ G + ++ +C CR + G C+ C+ + C+PC+CN
Sbjct: 918 CRCNAGGSFSEVCHSQTGQCECRANVQGQRCDKCKAGTFGL-------QSARGCVPCNCN 970
Query: 216 QHARR---CRFNSELFRLSGGRSGGVCERCRH---------------------------- 244
+ C + + + G +G C+RC H
Sbjct: 971 SFGSKSFDCEESGQCW-CQPGVTGKKCDRCAHGYFNFQEGGCTACECSHLGNNCDPKTGR 1029
Query: 245 -----HTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLG 299
+T G C C P W C+AC C +G+ CN +GQC C
Sbjct: 1030 CICPPNTIGEKCSKCAPNTWGHSITT-----GCKACNCSTVGSLDFQCNVNTGQCNCHPK 1084
Query: 300 VTGLTCNRCGPGYQQSRSPRMPCQRIP--EATTTLATTPGAYSSDPQCQNYCNMSDTRVH 357
+G C C G+ + +P +ATT + T SD Q C ++ +H
Sbjct: 1085 FSGAKCTECSRGHWNYPRCNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIH 1144
Score = 63.9 bits (154), Expect = 3e-10
Identities = 46/167 (27%), Positives = 60/167 (35%), Gaps = 41/167 (24%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQ 216
C+C C + RC C +T G C C P+ W T C C+C+
Sbjct: 1014 CECSHLGNNCDPKTG--RCICPPNTIGEKCSKCAPN--TWGHSITTG-----CKACNCST 1064
Query: 217 HAR---RCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACR 273
+C N+ G C C +G C C G W P C
Sbjct: 1065 VGSLDFQCNVNT-----------GQCN-CHPKFSGAKCTECSRGHWNYPR--------CN 1104
Query: 274 ACQCHPIGATGGTCNQTS---------GQCTCKLGVTGLTCNRCGPG 311
C C G TC+ + GQCTCK+ V G+ C+RC PG
Sbjct: 1105 LCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPG 1151
Score = 38.1 bits (87), Expect = 0.018
Identities = 42/186 (22%), Positives = 58/186 (31%), Gaps = 74/186 (39%)
Query: 157 CQCHGHAARCAARARPPR-----------------CHCRHHTTGPGCESCRPSHRDWPWR 199
C CHG A C R +C +T G CE+C D +R
Sbjct: 344 CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCT----DGFFR 399
Query: 200 P--ATPRHPHPCLPCSCN-------------QHARRCRFNSELFRLSGGRSGGV-CERC- 242
P +P +P PC PC C+ +HARR +G GGV C+RC
Sbjct: 400 PKGVSPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTG--FGGVSCDRCA 457
Query: 243 -------------------------------RHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
+ + G C C+ GF+ + +
Sbjct: 458 RGYTGYPDCKACNCSGLGSKNEDPCFGPCICKENVEGGDCSRCKSGFFNLQED---NWKG 514
Query: 272 CRACQC 277
C C C
Sbjct: 515 CDECFC 520
Score = 35.4 bits (80), Expect = 0.12
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 293 QCTCKLGVTGLTCNRCGPGYQQSRSPRMPCQRIPEAT--TTLATTPGAYSS--DPQ---C 345
+C C LG +GL+C C PG+ + RS P R P T T + +SS DP+ C
Sbjct: 1379 KCDCPLGYSGLSCEACLPGFYRLRS--QPGGRTPGPTLGTCVPCQCNGHSSLCDPETSIC 1436
Query: 346 QN 347
QN
Sbjct: 1437 QN 1438
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 99.4 bits (246), Expect = 7e-21
Identities = 55/166 (33%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 156 RCQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC- 214
RC CHGH+ C + C+HHT GP CE C+P + + A P C C C
Sbjct: 1158 RCSCHGHSEACEPETGACQ-GCQHHTEGPRCEQCQPGY----YGDAQRGTPQDCQLCPCY 1212
Query: 215 -----NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSR 269
Q A C +++ C+ C +GRHC C PG++ +PSQ +
Sbjct: 1213 GDPAAGQAAHTCFLDTD--------GHPTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQ 1264
Query: 270 RACRA-----CQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGP 310
R + C C P G+ C+ +GQC CK V GLTC+ C P
Sbjct: 1265 RDSQVPGPIGCNCDPQGSVSSQCD-AAGQCQCKAQVEGLTCSHCRP 1309
Score = 84.7 bits (208), Expect = 2e-16
Identities = 53/186 (28%), Positives = 75/186 (40%), Gaps = 27/186 (14%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGG 233
+C C GP C+ C + P + + C CSC+ H+ C +
Sbjct: 1125 QCSCPPGYRGPSCQDCDTGYTRTP----SGLYLGTCERCSCHGHSEACEPET-------- 1172
Query: 234 RSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCN----Q 289
G C+ C+HHT G C CQPG++ D + + + C+ C C+ A G +
Sbjct: 1173 ---GACQGCQHHTEGPRCEQCQPGYYGDAQRG--TPQDCQLCPCYGDPAAGQAAHTCFLD 1227
Query: 290 TSGQCTCKL---GVTGLTCNRCGPGYQQSRSPRMPCQR---IPEATTTLATTPGAYSSDP 343
T G TC G +G C RC PGY + S PCQR +P G+ SS
Sbjct: 1228 TDGHPTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSSQC 1287
Query: 344 QCQNYC 349
C
Sbjct: 1288 DAAGQC 1293
Score = 77.0 bits (188), Expect = 4e-14
Identities = 52/173 (30%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 157 CQCHGHAARCAARARPPRCHC---RHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCS 213
C C+GHA+ C P HC +H+T GP C C+ + A C PC
Sbjct: 764 CNCNGHASSCD----PVYGHCLNCQHNTEGPQCNKCKAGF----FGDAMKATATSCRPCP 815
Query: 214 CNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACR 273
C RF+ F + G++ C+ C GR C C PG+ +P QP
Sbjct: 816 CPYIDASRRFSDTCFLDTDGQA--TCDACAPGYTGRRCESCAPGYEGNPIQP-------- 865
Query: 274 ACQCHPIGATGGTCNQ-----TSGQ-CTCKLGVTGLTCNRCGPG--YQQSRSP 318
+C P+ C++ TSG+ C CK V G CN C G + +R+P
Sbjct: 866 GGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADGSFHLSTRNP 918
Score = 72.0 bits (175), Expect = 1e-12
Identities = 48/146 (32%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C C +G CESC P P + C C+CN HA C
Sbjct: 731 CRCPIGYSGLSCESCDAHFTRVPGGP----YLGTCSGCNCNGHASSC-----------DP 775
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGAT---GGTC-NQT 290
G C C+H+T G C+ C+ GF+ D + + +CR C C I A+ TC T
Sbjct: 776 VYGHCLNCQHNTEGPQCNKCKAGFFGDAMKA--TATSCRPCPCPYIDASRRFSDTCFLDT 833
Query: 291 SGQCTCKL---GVTGLTCNRCGPGYQ 313
GQ TC G TG C C PGY+
Sbjct: 834 DGQATCDACAPGYTGRRCESCAPGYE 859
Score = 72.0 bits (175), Expect = 1e-12
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 24/145 (16%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGR 234
C C G C+ C P + R + + C C CN H+ C +
Sbjct: 1530 CRCPPGYIGLSCQDCAPGYT----RTGSGLYLGHCELCECNGHSDLCHPET--------- 1576
Query: 235 SGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQC---HPIGATGGTCNQTS 291
G C +C+H+ AG C C PG++ D + + C+ C C +P TC
Sbjct: 1577 --GACSQCQHNAAGEFCELCAPGYYGDATAG--TPEDCQPCACPLTNPENMFSRTCESLG 1632
Query: 292 G---QCT-CKLGVTGLTCNRCGPGY 312
+CT C+ G TG C +CGPGY
Sbjct: 1633 AGGYRCTACEPGYTGQYCEQCGPGY 1657
Score = 62.8 bits (151), Expect = 7e-10
Identities = 74/314 (23%), Positives = 109/314 (34%), Gaps = 71/314 (22%)
Query: 157 CQCHGHAARCAARARPPRC-HCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC- 214
C+C+GH+ C C C+H+ G CE C P + + AT P C PC+C
Sbjct: 1563 CECNGHSDLC--HPETGACSQCQHNAAGEFCELCAPGY----YGDATAGTPEDCQPCACP 1616
Query: 215 -----NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSR 269
N +R C S G G C C G++C C PG+ +PS
Sbjct: 1617 LTNPENMFSRTCE--------SLGAGGYRCTACEPGYTGQYCEQCGPGYVGNPS------ 1662
Query: 270 RACRACQCHPIGATGGTCNQTSGQCTCKL------------GVTGLTCNRCGPGYQQSRS 317
GG C + Q + G L C G
Sbjct: 1663 ------------VQGGQCLPETNQAPLVVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYW 1710
Query: 318 PRMPCQRIPEATTTLATTPGAYSSDPQCQNYCNMSDTRVHMSLRRYCQQDHVLRAQVLAS 377
R + +P T G+ P Q SD V++ R Q + RA++L +
Sbjct: 1711 SREDGRPVPSGTQ--QRHQGSELHFPSVQ----PSDAGVYICTCRNLHQSNTSRAELLVT 1764
Query: 378 EAAGPAWQRLAVRVLAVYKQRAQPVRRGDQDAWVPRADLTCGCLRLQPGTDYLLLGSAVG 437
EA + V +QR+Q VR P AD+T C Y L+ + +
Sbjct: 1765 EAPSKP------ITVTVEEQRSQSVR--------PGADVTFICTAKSKSPAYTLVWTRLH 1810
Query: 438 DPDPTRLILDRHGL 451
+ +D +G+
Sbjct: 1811 NGKLPTRAMDFNGI 1824
Score = 35.8 bits (81), Expect = 0.091
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 157 CQCHGHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQ 216
C C + + +C C+ G C CRP H + +P CLPC C
Sbjct: 1275 CNCDPQGSVSSQCDAAGQCQCKAQVEGLTCSHCRPHHFH-----LSASNPDGCLPCFCMG 1329
Query: 217 HARRC 221
++C
Sbjct: 1330 ITQQC 1334
Score = 31.2 bits (69), Expect = 2.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 293 QCTCKLGVTGLTCNRCGPGYQQSRS 317
+C C G GL+C C PGY ++ S
Sbjct: 1529 ECRCPPGYIGLSCQDCAPGYTRTGS 1553
Score = 30.4 bits (67), Expect = 3.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 175 CHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNS 225
C C+++ G C C D + +T R+P CL C C +R C +S
Sbjct: 892 CRCKNNVVGRLCNECA----DGSFHLST-RNPDGCLKCFCMGVSRHCTSSS 937
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 87.4 bits (215), Expect = 3e-17
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 209 CLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFS 268
C+PC+CN H+ +C+ S G+C C+H+TAG HC CQ G++ +
Sbjct: 75 CVPCNCNGHSNQCQDGS-----------GICVNCQHNTAGEHCERCQEGYYGNAVHG--- 120
Query: 269 RRACRACQCHPIG--ATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
+CRAC C ATG N +C+CK G TG C RC PGY
Sbjct: 121 --SCRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGY 164
Score = 53.9 bits (128), Expect = 3e-07
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 119 ERVTFHSTPGPKATVAASHLRVEFGGQAGLAAAGLR-------GRC---QCHGHAARCAA 168
+RV F PG ++ + AS+ VEF G + R GRC C+GH+ +C
Sbjct: 33 QRVPFLQPPG-QSQLQASY--VEFRPSQGCSPGYYRDHKGLYTGRCVPCNCNGHSNQCQD 89
Query: 169 RARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC---NQHARRCRFNS 225
+ +C+H+T G CE C+ + H C C C N A C N
Sbjct: 90 GSGIC-VNCQHNTAGEHCERCQEGYY------GNAVH-GSCRACPCPHTNSFATGCVVN- 140
Query: 226 ELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGG 285
G V C+ G C C PG++ +P + +C+ C C+ G G
Sbjct: 141 ---------GGDVRCSCKAGYTGTQCERCAPGYFGNPQK---FGGSCQPCSCNSNGQL-G 187
Query: 286 TCNQTSGQC 294
+C+ +G C
Sbjct: 188 SCHPLTGDC 196
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 87.4 bits (215), Expect = 3e-17
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 209 CLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFS 268
C+PC+CN H+ +C+ S G+C C+H+TAG HC CQ G++ +
Sbjct: 75 CVPCNCNGHSNQCQDGS-----------GICVNCQHNTAGEHCERCQEGYYGNAVHG--- 120
Query: 269 RRACRACQCHPIG--ATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
+CRAC C ATG N +C+CK G TG C RC PGY
Sbjct: 121 --SCRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGY 164
Score = 53.9 bits (128), Expect = 3e-07
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 119 ERVTFHSTPGPKATVAASHLRVEFGGQAGLAAAGLR-------GRC---QCHGHAARCAA 168
+RV F PG ++ + AS+ VEF G + R GRC C+GH+ +C
Sbjct: 33 QRVPFLQPPG-QSQLQASY--VEFRPSQGCSPGYYRDHKGLYTGRCVPCNCNGHSNQCQD 89
Query: 169 RARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC---NQHARRCRFNS 225
+ +C+H+T G CE C+ + H C C C N A C N
Sbjct: 90 GSGIC-VNCQHNTAGEHCERCQEGYY------GNAVH-GSCRACPCPHTNSFATGCVVN- 140
Query: 226 ELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGG 285
G V C+ G C C PG++ +P + +C+ C C+ G G
Sbjct: 141 ---------GGDVRCSCKAGYTGTQCERCAPGYFGNPQK---FGGSCQPCSCNSNGQL-G 187
Query: 286 TCNQTSGQC 294
+C+ +G C
Sbjct: 188 SCHPLTGDC 196
>gi|157419140 laminin, gamma 2 isoform b precursor [Homo sapiens]
Length = 1111
Score = 82.8 bits (203), Expect = 6e-16
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
C CN +R+C F+ EL R +G +G C C +T G HC C+ GF+R R
Sbjct: 28 CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCKNGFYRHRE-----RDR 80
Query: 272 CRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
C C C+ G+ C+ SG+C+CK GVTG C+RC PG+
Sbjct: 81 CLPCNCNSKGSLSARCDN-SGRCSCKPGVTGARCDRCLPGF 120
Score = 77.8 bits (190), Expect = 2e-14
Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 157 CQCH-GHAARCAARARPPRCH-CRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC 214
C CH G + C+ C TG CE C + P+ P PC PC C
Sbjct: 462 CPCHNGFSCSVMPETEEVVCNNCPPGVTGARCELCADGYFGDPFGEHGP--VRPCQPCQC 519
Query: 215 NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRA 274
N + + RL+G C +C H+TAG +C C+ G++ DP P + + CRA
Sbjct: 520 NNNVDPSA-SGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAPNPADK-CRA 572
Query: 275 CQCHPIGATGGTCNQTSGQCTCKLGVTGLTC 305
C C+P+G+ C ++ G C CK G G C
Sbjct: 573 CNCNPMGSEPVGC-RSDGTCVCKPGFGGPNC 602
Score = 64.7 bits (156), Expect = 2e-10
Identities = 52/176 (29%), Positives = 66/176 (37%), Gaps = 36/176 (20%)
Query: 150 AAGLRGRCQCHGHAARCA-------ARARPPRC-HCRHHTTGPGCESCRPSHRDWPWRPA 201
A R C C+G + +C RC +C +T G CE C+
Sbjct: 21 ATSRREVCDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFY------- 73
Query: 202 TPRHPHPCLPCSCNQH---ARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGF 258
R CLPC+CN + RC + G C C+ G C C PGF
Sbjct: 74 RHRERDRCLPCNCNSKGSLSARCD------------NSGRCS-CKPGVTGARCDRCLPGF 120
Query: 259 WR--DPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
D R C C P G G C+ +G+C CK VTG C+RC GY
Sbjct: 121 HMLTDAGCTQDQRLLDSKCDCDPAGIAG-PCD--AGRCVCKPAVTGERCDRCRSGY 173
Score = 57.4 bits (137), Expect = 3e-08
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 28/197 (14%)
Query: 203 PRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDP 262
P P C PC C+ + C E + VC C G C C G++ DP
Sbjct: 453 PHDPRSCKPCPCH-NGFSCSVMPETEEV-------VCNNCPPGVTGARCELCADGYFGDP 504
Query: 263 SQPIFSRRACRACQCHPI--GATGGTCNQTSGQCT-CKLGVTGLTCNRCGPGYQQSRSPR 319
R C+ CQC+ + G C++ +G+C C G+ C++C GY
Sbjct: 505 FGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIHNTAGIYCDQCKAGYFGDPLAP 564
Query: 320 MPCQRIPEAT-TTLATTPGAYSSD-----------PQCQN---YCNMSDTRVHMSLRRYC 364
P + + + P SD P C++ C +V + + ++
Sbjct: 565 NPADKCRACNCNPMGSEPVGCRSDGTCVCKPGFGGPNCEHGAFSCPACYNQVKIQMDQFM 624
Query: 365 QQDHVLRAQVLASEAAG 381
QQ + R + L S+A G
Sbjct: 625 QQ--LQRMEALISKAQG 639
Score = 46.2 bits (108), Expect = 7e-05
Identities = 40/162 (24%), Positives = 53/162 (32%), Gaps = 39/162 (24%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPH-PCLPCSCNQHARRCRFNSELFRLSG 232
+C C G C+ C ++ R + P C+PC+C
Sbjct: 381 QCICPVGYKGQFCQDCASGYK----RDSARLGPFGTCIPCNC------------------ 418
Query: 233 GRSGGVCER------CRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGT 286
+ GG C+ C C GF+ DP P R+C+ C CH +
Sbjct: 419 -QGGGACDPDTGDCYSGDENPDIECADCPIGFYNDPHDP----RSCKPCPCHNGFSCSVM 473
Query: 287 CNQTSGQCT-CKLGVTGLTCNRCGPGY----QQSRSPRMPCQ 323
C C GVTG C C GY P PCQ
Sbjct: 474 PETEEVVCNNCPPGVTGARCELCADGYFGDPFGEHGPVRPCQ 515
Score = 37.7 bits (86), Expect = 0.024
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Query: 153 LRGRCQCH--GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCL 210
L +C C G A C A RC C+ TG C+ CR + + +P C
Sbjct: 135 LDSKCDCDPAGIAGPCDAG----RCVCKPAVTGERCDRCRSGYYN-----LDGGNPEGCT 185
Query: 211 PCSCNQHARRCRFNSE 226
C C H+ CR ++E
Sbjct: 186 QCFCYGHSASCRSSAE 201
>gi|157419138 laminin, gamma 2 isoform a precursor [Homo sapiens]
Length = 1193
Score = 82.8 bits (203), Expect = 6e-16
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRA 271
C CN +R+C F+ EL R +G +G C C +T G HC C+ GF+R R
Sbjct: 28 CDCNGKSRQCIFDRELHRQTG--NGFRCLNCNDNTDGIHCEKCKNGFYRHRE-----RDR 80
Query: 272 CRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
C C C+ G+ C+ SG+C+CK GVTG C+RC PG+
Sbjct: 81 CLPCNCNSKGSLSARCDN-SGRCSCKPGVTGARCDRCLPGF 120
Score = 77.8 bits (190), Expect = 2e-14
Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 157 CQCH-GHAARCAARARPPRCH-CRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSC 214
C CH G + C+ C TG CE C + P+ P PC PC C
Sbjct: 462 CPCHNGFSCSVMPETEEVVCNNCPPGVTGARCELCADGYFGDPFGEHGP--VRPCQPCQC 519
Query: 215 NQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRA 274
N + + RL+G C +C H+TAG +C C+ G++ DP P + + CRA
Sbjct: 520 NNNVDPSA-SGNCDRLTGR-----CLKCIHNTAGIYCDQCKAGYFGDPLAPNPADK-CRA 572
Query: 275 CQCHPIGATGGTCNQTSGQCTCKLGVTGLTC 305
C C+P+G+ C ++ G C CK G G C
Sbjct: 573 CNCNPMGSEPVGC-RSDGTCVCKPGFGGPNC 602
Score = 64.7 bits (156), Expect = 2e-10
Identities = 52/176 (29%), Positives = 66/176 (37%), Gaps = 36/176 (20%)
Query: 150 AAGLRGRCQCHGHAARCA-------ARARPPRC-HCRHHTTGPGCESCRPSHRDWPWRPA 201
A R C C+G + +C RC +C +T G CE C+
Sbjct: 21 ATSRREVCDCNGKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFY------- 73
Query: 202 TPRHPHPCLPCSCNQH---ARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGF 258
R CLPC+CN + RC + G C C+ G C C PGF
Sbjct: 74 RHRERDRCLPCNCNSKGSLSARCD------------NSGRCS-CKPGVTGARCDRCLPGF 120
Query: 259 WR--DPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGY 312
D R C C P G G C+ +G+C CK VTG C+RC GY
Sbjct: 121 HMLTDAGCTQDQRLLDSKCDCDPAGIAG-PCD--AGRCVCKPAVTGERCDRCRSGY 173
Score = 57.4 bits (137), Expect = 3e-08
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 28/197 (14%)
Query: 203 PRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDP 262
P P C PC C+ + C E + VC C G C C G++ DP
Sbjct: 453 PHDPRSCKPCPCH-NGFSCSVMPETEEV-------VCNNCPPGVTGARCELCADGYFGDP 504
Query: 263 SQPIFSRRACRACQCHPI--GATGGTCNQTSGQCT-CKLGVTGLTCNRCGPGYQQSRSPR 319
R C+ CQC+ + G C++ +G+C C G+ C++C GY
Sbjct: 505 FGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIHNTAGIYCDQCKAGYFGDPLAP 564
Query: 320 MPCQRIPEAT-TTLATTPGAYSSD-----------PQCQN---YCNMSDTRVHMSLRRYC 364
P + + + P SD P C++ C +V + + ++
Sbjct: 565 NPADKCRACNCNPMGSEPVGCRSDGTCVCKPGFGGPNCEHGAFSCPACYNQVKIQMDQFM 624
Query: 365 QQDHVLRAQVLASEAAG 381
QQ + R + L S+A G
Sbjct: 625 QQ--LQRMEALISKAQG 639
Score = 46.2 bits (108), Expect = 7e-05
Identities = 40/162 (24%), Positives = 53/162 (32%), Gaps = 39/162 (24%)
Query: 174 RCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPH-PCLPCSCNQHARRCRFNSELFRLSG 232
+C C G C+ C ++ R + P C+PC+C
Sbjct: 381 QCICPVGYKGQFCQDCASGYK----RDSARLGPFGTCIPCNC------------------ 418
Query: 233 GRSGGVCER------CRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGT 286
+ GG C+ C C GF+ DP P R+C+ C CH +
Sbjct: 419 -QGGGACDPDTGDCYSGDENPDIECADCPIGFYNDPHDP----RSCKPCPCHNGFSCSVM 473
Query: 287 CNQTSGQCT-CKLGVTGLTCNRCGPGY----QQSRSPRMPCQ 323
C C GVTG C C GY P PCQ
Sbjct: 474 PETEEVVCNNCPPGVTGARCELCADGYFGDPFGEHGPVRPCQ 515
Score = 37.7 bits (86), Expect = 0.024
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Query: 153 LRGRCQCH--GHAARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCL 210
L +C C G A C A RC C+ TG C+ CR + + +P C
Sbjct: 135 LDSKCDCDPAGIAGPCDAG----RCVCKPAVTGERCDRCRSGYYN-----LDGGNPEGCT 185
Query: 211 PCSCNQHARRCRFNSE 226
C C H+ CR ++E
Sbjct: 186 QCFCYGHSASCRSSAE 201
>gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 79.0 bits (193), Expect = 9e-15
Identities = 71/242 (29%), Positives = 93/242 (38%), Gaps = 33/242 (13%)
Query: 90 LILSAAWASGGPWRLLWHRPAWPGALGGPERVTFH----STPGPKATVAASHLRVEFGGQ 145
+ LS+AW S P LLW A G F S G + S RV G
Sbjct: 1 MALSSAWRSVLPLWLLWSAACSRAASGDDNAFPFDIEGSSAVGRQDPPETSEPRVALGRL 60
Query: 146 AGLAA---AG----LRGRC---QCHGHAARCAARARPPRC-HCRHHTTGPGCESCRPSHR 194
A AG L G C C+G++ C + C HC+ +TTG CE C +
Sbjct: 61 PPAAEKCNAGFFHTLSGECVPCDCNGNSNECLDGSG--YCVHCQRNTTGEHCEKCLDGYI 118
Query: 195 DWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYC 254
R A P C PC C F +R ++G V C + AG +C C
Sbjct: 119 GDSIRGA----PQFCQPCPCPL-PHLANFAESCYR----KNGAVRCICNENYAGPNCERC 169
Query: 255 QPGFWRDPSQPIFSRRACRACQCHPIGATG---GTCNQTSGQC-TCKLGVTGLTCNRCGP 310
PG++ P+ C+ C C C++ +GQC C TG C RC P
Sbjct: 170 APGYY---GNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAP 226
Query: 311 GY 312
GY
Sbjct: 227 GY 228
Score = 56.6 bits (135), Expect = 5e-08
Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 19/146 (13%)
Query: 163 AARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCR 222
A C + RC C + GP CE C P + P + C C C+ ++
Sbjct: 143 AESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGS-----TCKKCDCSGNS---- 193
Query: 223 FNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGA 282
+ L G C C +T G C C PG++ D + C C C
Sbjct: 194 -DPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDAR----IAKNCAVCNC----- 243
Query: 283 TGGTCNQTSGQCTCKLGVTGLTCNRC 308
GG C+ +G+C + C++C
Sbjct: 244 GGGPCDSVTGECLEEGFEPPTGCDKC 269
>gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens]
Length = 1823
Score = 79.0 bits (193), Expect = 9e-15
Identities = 71/242 (29%), Positives = 93/242 (38%), Gaps = 33/242 (13%)
Query: 90 LILSAAWASGGPWRLLWHRPAWPGALGGPERVTFH----STPGPKATVAASHLRVEFGGQ 145
+ LS+AW S P LLW A G F S G + S RV G
Sbjct: 1 MALSSAWRSVLPLWLLWSAACSRAASGDDNAFPFDIEGSSAVGRQDPPETSEPRVALGRL 60
Query: 146 AGLAA---AG----LRGRC---QCHGHAARCAARARPPRC-HCRHHTTGPGCESCRPSHR 194
A AG L G C C+G++ C + C HC+ +TTG CE C +
Sbjct: 61 PPAAEKCNAGFFHTLSGECVPCDCNGNSNECLDGSG--YCVHCQRNTTGEHCEKCLDGYI 118
Query: 195 DWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYC 254
R A P C PC C F +R ++G V C + AG +C C
Sbjct: 119 GDSIRGA----PQFCQPCPCPL-PHLANFAESCYR----KNGAVRCICNENYAGPNCERC 169
Query: 255 QPGFWRDPSQPIFSRRACRACQCHPIGATG---GTCNQTSGQC-TCKLGVTGLTCNRCGP 310
PG++ P+ C+ C C C++ +GQC C TG C RC P
Sbjct: 170 APGYY---GNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAP 226
Query: 311 GY 312
GY
Sbjct: 227 GY 228
Score = 55.8 bits (133), Expect = 8e-08
Identities = 34/132 (25%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 163 AARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCR 222
A C + RC C + GP CE C P + P + C C C+ ++
Sbjct: 143 AESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGS-----TCKKCDCSGNS---- 193
Query: 223 FNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGA 282
+ L G C C +T G C C PG++ D + C C C
Sbjct: 194 -DPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDAR----IAKNCAVCNC----- 243
Query: 283 TGGTCNQTSGQC 294
GG C+ +G+C
Sbjct: 244 GGGPCDSVTGEC 255
>gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 79.0 bits (193), Expect = 9e-15
Identities = 71/242 (29%), Positives = 93/242 (38%), Gaps = 33/242 (13%)
Query: 90 LILSAAWASGGPWRLLWHRPAWPGALGGPERVTFH----STPGPKATVAASHLRVEFGGQ 145
+ LS+AW S P LLW A G F S G + S RV G
Sbjct: 1 MALSSAWRSVLPLWLLWSAACSRAASGDDNAFPFDIEGSSAVGRQDPPETSEPRVALGRL 60
Query: 146 AGLAA---AG----LRGRC---QCHGHAARCAARARPPRC-HCRHHTTGPGCESCRPSHR 194
A AG L G C C+G++ C + C HC+ +TTG CE C +
Sbjct: 61 PPAAEKCNAGFFHTLSGECVPCDCNGNSNECLDGSG--YCVHCQRNTTGEHCEKCLDGYI 118
Query: 195 DWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYC 254
R A P C PC C F +R ++G V C + AG +C C
Sbjct: 119 GDSIRGA----PQFCQPCPCPL-PHLANFAESCYR----KNGAVRCICNENYAGPNCERC 169
Query: 255 QPGFWRDPSQPIFSRRACRACQCHPIGATG---GTCNQTSGQC-TCKLGVTGLTCNRCGP 310
PG++ P+ C+ C C C++ +GQC C TG C RC P
Sbjct: 170 APGYY---GNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAP 226
Query: 311 GY 312
GY
Sbjct: 227 GY 228
Score = 56.6 bits (135), Expect = 5e-08
Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 19/146 (13%)
Query: 163 AARCAARARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCR 222
A C + RC C + GP CE C P + P + C C C+ ++
Sbjct: 143 AESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGS-----TCKKCDCSGNS---- 193
Query: 223 FNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGA 282
+ L G C C +T G C C PG++ D + C C C
Sbjct: 194 -DPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDAR----IAKNCAVCNC----- 243
Query: 283 TGGTCNQTSGQCTCKLGVTGLTCNRC 308
GG C+ +G+C + C++C
Sbjct: 244 GGGPCDSVTGECLEEGFEPPTGCDKC 269
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.485
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,495,461
Number of Sequences: 37866
Number of extensions: 1454437
Number of successful extensions: 7532
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 158
Number of HSP's that attempted gapping in prelim test: 6012
Number of HSP's gapped (non-prelim): 879
length of query: 489
length of database: 18,247,518
effective HSP length: 106
effective length of query: 383
effective length of database: 14,233,722
effective search space: 5451515526
effective search space used: 5451515526
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.