Guide to the Human Genome
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Name: FTSJD2 Sequence: fasta or formatted (835aa) NCBI GI: 24307983
Description:

FtsJ methyltransferase domain containing 2

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         38           2
 C cysteine            1.9         16           2
 D aspartate           7.2         60           2
 E glutamate           7.3         61           2
 F phenylalanine       5.9         49           2
 G glycine             6.7         56           2
 H histidine           1.9         16           1
 I isoleucine          5.0         42           2
 K lysine              7.8         65           3
 L leucine             8.6         72           3
 M methionine          2.9         24           1
 N asparagine          2.6         22           1
 P proline             4.2         35           2
 Q glutamine           3.6         30           1
 R arginine            6.3         53           2
 S serine              8.4         70           3
 T threonine           4.7         39           2
 V valine              6.2         52           2
 W tryptophan          1.3         11           1
 Y tyrosine            2.9         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FtsJ methyltransferase domain containing 2 
FTSJD1                0.041   FtsJ methyltransferase domain containing 1 
FTSJD1                0.041   FtsJ methyltransferase domain containing 1 
FTSJ1                 0.015   FtsJ homolog 1 isoform b 
FTSJ1                 0.015   FtsJ homolog 1 isoform b 
FTSJ1                 0.014   FtsJ homolog 1 isoform a 
TFIP11                0.010   tuftelin interacting protein 11 
TFIP11                0.010   tuftelin interacting protein 11 
RBM17                 0.009   RNA binding motif protein 17 
RBM17                 0.009   RNA binding motif protein 17 
SON                   0.009   SON DNA-binding protein isoform F 
PINX1                 0.008   PIN2-interacting protein 1 
ZGPAT                 0.008   zinc finger, CCCH-type with G patch domain isoform ...
ZGPAT                 0.008   zinc finger, CCCH-type with G patch domain isoform ...
AGGF1                 0.008   angiogenic factor VG5Q 
SF4                   0.008   splicing factor 4 
DSPP                  0.007   dentin sialophosphoprotein preproprotein 
GOLGA1                0.007   golgin 97 
STAT4                 0.007   signal transducer and activator of transcription 4 [H...
ZCCHC10               0.007   zinc finger, CCHC domain containing 10 
MAP3K1                0.006   mitogen-activated protein kinase kinase kinase 1 [H...
RBM5                  0.006   RNA binding motif protein 5 
ZGPAT                 0.006   zinc finger, CCCH-type with G patch domain isoform ...
RBM10                 0.006   RNA binding motif protein 10 isoform 1 
RBM10                 0.006   RNA binding motif protein 10 isoform 2 
NKRF                  0.005   transcription factor NRF 
FTSJ3                 0.005   FtsJ homolog 3 
GPATCH2               0.005   G patch domain containing 2 
HMHA1                 0.004   minor histocompatibility antigen HA-1 
GPATCH3               0.004   G patch domain containing 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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