Guide to the Human Genome
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Name: STAT4 Sequence: fasta or formatted (748aa) NCBI GI: 4507255
Description:

signal transducer and activator of transcription 4

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         30           3
 C cysteine            1.2          9           1
 D aspartate           4.3         32           2
 E glutamate           7.6         57           2
 F phenylalanine       3.9         29           2
 G glycine             3.9         29           2
 H histidine           2.8         21           1
 I isoleucine          5.5         41           2
 K lysine              6.3         47           2
 L leucine            12.0         90           3
 M methionine          3.6         27           1
 N asparagine          5.2         39           2
 P proline             4.9         37           3
 Q glutamine           6.0         45           2
 R arginine            4.4         33           2
 S serine              8.7         65           3
 T threonine           5.3         40           2
 V valine              6.0         45           2
 W tryptophan          1.6         12           1
 Y tyrosine            2.7         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal transducer and activator of transcription 4 [H... 
STAT1                 0.496   signal transducer and activator of transcription 1 is...
STAT1                 0.491   signal transducer and activator of transcription 1 i...
STAT3                 0.455   signal transducer and activator of transcription 3 i...
STAT3                 0.455   signal transducer and activator of transcription 3 i...
STAT3                 0.452   signal transducer and activator of transcription 3 i...
STAT2                 0.329   signal transducer and activator of transcription 2 [H...
STAT5B                0.193   signal transducer and activator of transcription 5B ...
STAT5A                0.180   signal transducer and activator of transcription 5A ...
STAT6                 0.123   signal transducer and activator of transcription 6 [...
PPFIA1                0.013   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.013   PTPRF interacting protein alpha 1 isoform b 
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LRRFIP1               0.011   leucine rich repeat (in FLII) interacting protein 1...
NAP5                  0.009   Nck-associated protein 5 isoform 2 
NAP5                  0.009   Nck-associated protein 5 isoform 1 
MYH14                 0.009   myosin, heavy chain 14 isoform 1 
MYH14                 0.009   myosin, heavy chain 14 isoform 2 
MYH14                 0.009   myosin, heavy chain 14 isoform 3 
NUMA1                 0.009   nuclear mitotic apparatus protein 1 
KIAA1009              0.009   KIAA1009 protein 
C6orf204              0.007   chromosome 6 open reading frame 204 isoform a [Homo...
FTSJD2                0.007   FtsJ methyltransferase domain containing 2 
KIAA1598              0.007   shootin1 isoform a 
KIAA1598              0.007   shootin1 isoform b 
C6orf97               0.007   hypothetical protein LOC80129 
HOOK1                 0.007   hook homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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