Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 24307919
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
[Homo sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho... 306 6e-84
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 79 2e-15
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 75 2e-14
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 75 3e-14
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 74 4e-14
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 74 7e-14
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 74 7e-14
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 72 1e-13
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 72 1e-13
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 70 9e-13
gi|116812577 LUC7-like 2 [Homo sapiens] 69 2e-12
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 69 2e-12
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 68 4e-12
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 67 5e-12
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 67 6e-12
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 65 2e-11
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens] 65 2e-11
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 65 2e-11
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 65 3e-11
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 65 3e-11
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 64 4e-11
gi|52426743 cisplatin resistance-associated overexpressed protei... 64 5e-11
gi|19923485 cisplatin resistance-associated overexpressed protei... 64 5e-11
gi|41393554 LUC7-like isoform b [Homo sapiens] 63 1e-10
gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain c... 63 1e-10
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 62 3e-10
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 62 3e-10
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 62 3e-10
gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens] 62 3e-10
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 61 3e-10
>gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Homo
sapiens]
Length = 155
Score = 306 bits (783), Expect = 6e-84
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST 60
MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST
Sbjct: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST 60
Query: 61 SPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKKV 120
SPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKKV
Sbjct: 61 SPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKKV 120
Query: 121 DGSVNAYAINVSQKRKYRQYMNRKGGFNRPLDFIA 155
DGSVNAYAINVSQKRKYRQYMNRKGGFNRPLDFIA
Sbjct: 121 DGSVNAYAINVSQKRKYRQYMNRKGGFNRPLDFIA 155
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 78.6 bits (192), Expect = 2e-15
Identities = 58/124 (46%), Positives = 69/124 (55%), Gaps = 21/124 (16%)
Query: 3 RSRSRSPRRERRRSR----STSRERERRRRERSRSRERDRRRSRSRSPHRRRSRS---PR 55
RSR R RRER RSR S SR+R+R RR RSR R+R R R RSRS RRRSRS R
Sbjct: 41 RSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGR 100
Query: 56 RHRSTSP--------SPSRLKERRD--EEKKETKETKSKERQITEEDL----EGKTEEEI 101
R RS+SP + SR KE+ D E KE K+ K + E+D + K EEE+
Sbjct: 101 RSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEM 160
Query: 102 EMMK 105
K
Sbjct: 161 RKRK 164
Score = 65.1 bits (157), Expect = 2e-11
Identities = 54/137 (39%), Positives = 72/137 (52%), Gaps = 25/137 (18%)
Query: 3 RSRSRSPRRER------RRSRSTSRERERRR---RERSRSRERDRRR-SRSRSPHRRRSR 52
RSRSRSP +R RRSRS R+R R R R++ RSR RDR+R RSRS R RSR
Sbjct: 21 RSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSR 80
Query: 53 SPRRHRSTSPSPSRLKER---------RDEEKKETKETKSKER----QITEEDLEGKTEE 99
RR RS SR + R ++ KK ++SKE+ + ++E + K ++
Sbjct: 81 ERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDK 140
Query: 100 EIEMMKLMGFASFDSTK 116
E E K G +FD K
Sbjct: 141 EDEKEKDAG--NFDQNK 155
Score = 53.9 bits (128), Expect = 5e-08
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR--RSRSPRRHR 58
MGR +R R RS SR R R ++ RS+ D RRSRSR RR RSRS + R
Sbjct: 1 MGRESRHYRKRSASRGRSGSRSRSRSPSDK-RSKRGDDRRSRSRDRDRRRERSRSRDKRR 59
Query: 59 STSPSPSRLKERRDEEK---KETKETKSKERQITEEDLEGK 96
S S RL+ R E+ +E + ++S++R+ + G+
Sbjct: 60 SRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGR 100
Score = 45.1 bits (105), Expect = 2e-05
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 25 RRRRERSRSRERDRRRSRSRSP--------HRRRSRSPRRHRSTSPSPSRLKER-RDEEK 75
R R+RS SR R RSRSRSP RRSRS R R S SR K R R ++
Sbjct: 6 RHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDR 65
Query: 76 KETKETKSKERQITEEDLEGKTEE 99
K + ++S+ER + E ++ +
Sbjct: 66 KRLRRSRSRERDRSRERRRSRSRD 89
Score = 43.9 bits (102), Expect = 6e-05
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 3 RSRSRSPRRERRRS------RSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRR 56
RSR R RERRRS RS SR R RR R S + + +RSRS +
Sbjct: 72 RSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKT------- 124
Query: 57 HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
S + K++ D+E ++ K+ + ++ EE++ K +E +E
Sbjct: 125 -DGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMR-KRKERVE 168
Score = 42.7 bits (99), Expect = 1e-04
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR----------RERSRSRER--DRRRSRSRSPHRRR 50
R R RS R+RRRSRS SR R R RSRS+E+ S+ + +
Sbjct: 80 RERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDD 139
Query: 51 SRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMK 105
+ + + ++L+E + K+ ++ + ++R+ E++ G+ ++EIE MK
Sbjct: 140 KEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENI-GELKKEIEEMK 193
Score = 32.3 bits (72), Expect = 0.17
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 36 RDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEG 95
R+ R R RS R RS S R RS SPS R K D + + +ER + +
Sbjct: 3 RESRHYRKRSASRGRSGS--RSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS 60
Query: 96 KTEE 99
++ +
Sbjct: 61 RSRD 64
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 75.5 bits (184), Expect = 2e-14
Identities = 52/117 (44%), Positives = 65/117 (55%), Gaps = 19/117 (16%)
Query: 5 RSRSPRRERRRSRSTS----------------RERERRRRER-SRSRERDRRRSRS--RS 45
RS SPRR RRSRS S RE+ER+R ER ++ RE++RRRSRS R
Sbjct: 265 RSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRG 324
Query: 46 PHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
RRRSRS RHRS S S R +RRD +++ KE + R+ + D E E E E
Sbjct: 325 LERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKE 381
Score = 61.6 bits (148), Expect = 3e-10
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
G R RS RER RSRS SR+R+ RR+R R RE++ R R R + R R +
Sbjct: 324 GLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERE 383
Query: 62 PSPSRLKERR---DEEKKETKETKSKERQITEEDLEGKTEEE 100
S R KE+R + E+K+ KE K +R+ ++ + K E++
Sbjct: 384 RSRERSKEQRSRGEVEEKKHKEDKD-DRRHRDDKRDSKKEKK 424
Score = 57.8 bits (138), Expect = 4e-09
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERS-----RSRERDRRRS-----RSRSPHRRRSR 52
R R ++E++ SRS SRER+ R R RS RSR R + +S S+ +RSR
Sbjct: 413 RDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSR 472
Query: 53 SPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
S + R+ S S+ +E ++K K ++SKER + + K + +
Sbjct: 473 SGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSD 520
Score = 55.5 bits (132), Expect = 2e-08
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRR-------ERSRSRERDRRRSRSRSPHRRRSRSPR 55
R R R+R + RE+ERRR ER RSR R+R RSRSRS R+ R R
Sbjct: 293 RELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDR 352
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMK 105
+ + RD +K+ E + + + E E ++ E+E K
Sbjct: 353 DREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKK 402
Score = 50.8 bits (120), Expect = 5e-07
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 31/106 (29%)
Query: 3 RSRSRS-----PRRERRRSRSTSRERERRR-----RERSRSRERDRRRSRSRSPHRR--- 49
RSRSRS RR+R R R ER RRR +ER RE++R RSR RS +R
Sbjct: 337 RSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRG 396
Query: 50 --------RSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQ 87
+ RRHR ++RD KKE K ++S+ R+
Sbjct: 397 EVEEKKHKEDKDDRRHRD---------DKRD-SKKEKKHSRSRSRE 432
Score = 49.7 bits (117), Expect = 1e-06
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 RSRSRSPRRERRRSRSTSRER----------------ERRRRERSRSRERDRRRSRSRSP 46
+ R +ER RSR S+E+ +RR R+ R +++++ SRSRS
Sbjct: 372 KERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSR 431
Query: 47 HRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTE 98
R+ R + S SR KE+ + K E+KE +K + +G+T+
Sbjct: 432 ERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKR---SRSGSQGRTD 480
Score = 45.1 bits (105), Expect = 2e-05
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 9 PRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLK 68
PR+ ++ + + E +R ER RSR R S RSP R RSRS R S S R
Sbjct: 237 PRKIKKDGKEGAEEIDRHV-ERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDREL 295
Query: 69 ERRDEEKKETKETKSKERQ 87
ER E ++ +E K +E++
Sbjct: 296 EREKERQRLEREAKEREKE 314
Score = 44.7 bits (104), Expect = 3e-05
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRS--------------RSRSPH- 47
RSRSRS R +RSRS S+E+ + + S+ + R RS R SP
Sbjct: 436 RSRSRS-RNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSK 494
Query: 48 ---RRRSRSPRRHRSTSPSPSR-LKERRDEEKKETKETKSKERQITEED 92
R+RSRS R S S+ ++ D + ++ E +S+E+Q +D
Sbjct: 495 EKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKNKD 543
Score = 39.3 bits (90), Expect = 0.001
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 20 SRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERR-----DEE 74
+R R+ ++ + + E DR R RS RRS SPRR S S S +E D E
Sbjct: 235 TRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRE 294
Query: 75 KKETKETKSKERQITEEDLEGKTEEEIE 102
+ KE + ER+ E + E + I+
Sbjct: 295 LEREKERQRLEREAKEREKERRRSRSID 322
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 12 ERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRR--SRSPRRHRSTSPSPSRLKE 69
ERRRSRS RS S R RRSRSRS HR S S R RL+
Sbjct: 256 ERRRSRSP---------RRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLER 306
Query: 70 RRDEEKKETKETKSKER 86
E +KE + ++S +R
Sbjct: 307 EAKEREKERRRSRSIDR 323
Score = 37.7 bits (86), Expect = 0.004
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRER-----ERRRRERSRSRERDRRR--SRSRSPHRRRSRSPR 55
+ ++ S + +RSRS S+ R + ++RE S S+E+ R+R S+ RS R S S
Sbjct: 458 KHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDS-- 515
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKERQI 88
+ S R + + E++ + K+ K+K+ +
Sbjct: 516 --KDQSDKHDRRRSQSIEQESQEKQHKNKDETV 546
Score = 32.7 bits (73), Expect = 0.13
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 2 GRSRSRSPRRERRRSRSTSRERER-RRRERSRSRERDRRRSRSRSPHRRRSRS 53
GR+ S ++R S S + R+R R +ERS R+ + +S RRRS+S
Sbjct: 477 GRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQS 529
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 74.7 bits (182), Expect = 3e-14
Identities = 46/100 (46%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRR----RERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
GRSRSR+P R R RSR+ +R R R R R RSRSR RRRSR+RSP RRRSRS
Sbjct: 582 GRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPA 641
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
R + S SR RR + T + + R T G++
Sbjct: 642 RRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRS 681
Score = 66.6 bits (161), Expect = 8e-12
Identities = 45/93 (48%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 3 RSRSRSPRRERRRSRST-----SRERERRRRERSRSRERDRRRSRSRSPHRRRSRS---P 54
R RSRS RR R SRS SR R RR RSRSR RRRSRSR+P RRRSRS
Sbjct: 551 RGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPA 610
Query: 55 RRHRSTSPSPSRLKERRDEEKKETKETKSKERQ 87
RR RS S +P+R + R + ++S R+
Sbjct: 611 RRGRSRSRTPARRRSRTRSPVRRRSRSRSPARR 643
Score = 61.6 bits (148), Expect = 3e-10
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 11/94 (11%)
Query: 3 RSRSRSP-RRERRRSRSTSRERER-----RRRERSRSRERDRRRSRSRSPHRR---RSRS 53
RSRSR+P RR R RSR+ +R R R RRR RSRS R RSRSR+P RR RSR+
Sbjct: 603 RSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRT 662
Query: 54 P-RRHRSTSPSPSRLKERRDEEKKETKETKSKER 86
P RR RS S +P+R + R + + +S+ R
Sbjct: 663 PARRGRSRSRTPAR-RSGRSRSRTPARRGRSRSR 695
Score = 61.2 bits (147), Expect = 3e-10
Identities = 46/112 (41%), Positives = 58/112 (51%), Gaps = 17/112 (15%)
Query: 3 RSRSRSPRRERRRSRS----TSRERER------RRRERSRSRERDRRRSRSRSP----HR 48
RSRSR+P RRRSRS SR R R RRR RSR+ RRRSRSR+P R
Sbjct: 1875 RSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRR 1934
Query: 49 RRSRSP---RRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
RSR+P RR RS +P +R + R + ++S+ IT +T
Sbjct: 1935 SRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT 1986
Score = 60.8 bits (146), Expect = 4e-10
Identities = 43/101 (42%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR---RSRSPRRHR 58
GRSRSR+P R R RS SR RR R RSR+ R RSRSR+P RR RSR+PRR R
Sbjct: 645 GRSRSRTPAR---RGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGR 701
Query: 59 STSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
S SR RR T + + + +E + +T +
Sbjct: 702 SR----SRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ 738
Score = 57.4 bits (137), Expect = 5e-09
Identities = 45/100 (45%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 2 GRSRSRSP-RRERRRSRSTSRERERRRRERSRSRERDRR-RSRSRSPHRRRSRS---PRR 56
GRSRSR+P RR R RSR+ + RR RSRSR RR RSRSR+P R RSRS RR
Sbjct: 656 GRSRSRTPARRGRSRSRTPA-----RRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRR 710
Query: 57 HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGK 96
RS S +P R +++ K S+ R + E K
Sbjct: 711 GRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMK 750
Score = 56.6 bits (135), Expect = 8e-09
Identities = 44/109 (40%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 3 RSRSRSPRRE----RRRSRSTSRERERRRRERSRSRERDRRRSR------SRSPHR---- 48
RSRSRS R + RRR RS S + RRR+RSRSR R RR R SRSP R
Sbjct: 1772 RSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESS 1831
Query: 49 RRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
R S RR RS +P SR + R K ++S+ T +T
Sbjct: 1832 RTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRT 1880
Score = 56.2 bits (134), Expect = 1e-08
Identities = 43/107 (40%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSP--HRRRSRS------P 54
RSRSR+P RRRSRS R RRR RSR+ RRRSRSR+P RRRSRS
Sbjct: 1922 RSRSRTPPVTRRRSRS--RTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITR 1979
Query: 55 RRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEI 101
RR RS + +R + R + ++S+ +T +T I
Sbjct: 1980 RRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAI 2026
Score = 55.8 bits (133), Expect = 1e-08
Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 3 RSRSRSPRRERRRSRS---TSRERER-------RRRERSRSRERDRRRSRSRSP---HRR 49
RSRSR+ RRRSRS +R R R RRR RSR+ RRRSRSR+P R
Sbjct: 1887 RSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 1946
Query: 50 RSRSP----RRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
RSR+P RR RS +P +R + R + ++S+ +T +T
Sbjct: 1947 RSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRT 1998
Score = 53.9 bits (128), Expect = 5e-08
Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 5 RSRSPRRERRRSRSTSR---ERERRRRERSRSRERDRRRSRSRSP---HRRRSRSP-RRH 57
RSRSP+R R RSRS R R R + R RSR R RS SRSP R RSR+P RR
Sbjct: 524 RSRSPQR-RGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRG 582
Query: 58 RSTSPSPSRLKER-----RDEEKKETKETKSKERQITEEDLEGKTEEEI 101
RS S +P+R + R R + T + + R T +T +
Sbjct: 583 RSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPV 631
Score = 53.9 bits (128), Expect = 5e-08
Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR---RSRSP-RRH 57
GRSRSR+P R RSRS R RR RSRSR R RSRSRS RR SR+P RR
Sbjct: 667 GRSRSRTPARRSGRSRS----RTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG 722
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKER 86
RS S S + K R + + + + ++
Sbjct: 723 RSGSSSERKNKSRTSQRRSRSNSSPEMKK 751
Score = 53.1 bits (126), Expect = 9e-08
Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSP----HRRRSRSPRRHR 58
RSRSR+ RRRSRS + RRR RSR+ RRRSRSR+P R RSR+P R
Sbjct: 1981 RSRSRTSPVTRRRSRSRTSP-VTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPR 2039
Query: 59 STSPSPSRLKERRDEEKKETKETKSKERQIT 89
S S S L RR + T T +R +T
Sbjct: 2040 KRSRSRSPLAIRR-RSRSRTPRTARGKRSLT 2069
Score = 51.6 bits (122), Expect = 3e-07
Identities = 45/106 (42%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 2 GRSRSRSPRRERRRSRST-SRERERRRRERSRSRERDRRRSRSRSPHRR-RSRSPRRHRS 59
G SRSRSP+ R RS R R +RR RSRS +R SRSR+ RR RSRS RR RS
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGW-SRSRNTQRRGRSRSARRGRS 562
Query: 60 TSPSP-------SRLKERRDEEKKET-KETKSKERQITEEDLEGKT 97
S SP SR RR + T +S+ R T +T
Sbjct: 563 HSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT 608
Score = 50.1 bits (118), Expect = 8e-07
Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSR-SPHRRRSR------SPR 55
RSRSR+ RRSRS + RRR RSR+ RRRSRSR S RRRSR S R
Sbjct: 1863 RSRSRASPATHRRSRSRT-PLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRR 1921
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKER 86
R RS +P +R RR + T +S+ R
Sbjct: 1922 RSRSRTPPVTR---RRSRSRTPTTRRRSRSR 1949
Score = 50.1 bits (118), Expect = 8e-07
Identities = 42/112 (37%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 3 RSRSRSP---RRERRRSRSTSRERERRR-----RERSRSRE-RDRRRSRSRSP----HRR 49
RSRSR+ RR R R+ SR R R R R RSRSR RRRSRSR+P R
Sbjct: 1899 RSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRS 1958
Query: 50 RSRSP----RRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
RSR+P RR RS + +R + R + ++S+ +T +T
Sbjct: 1959 RSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRT 2010
Score = 49.3 bits (116), Expect = 1e-06
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
S SRSP ++++ + ++++R RR S S R+R++S + HR S S +R + SP+
Sbjct: 178 SSSRSPTPKQKKKK---KKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKR-KHRSPT 233
Query: 64 PSRLKERRDEEKKETKET 81
P ++ +D+++K ++ T
Sbjct: 234 PKSKRKSKDKKRKRSRST 251
Score = 49.3 bits (116), Expect = 1e-06
Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 18/86 (20%)
Query: 3 RSRSRSPRRERRRSRS----TSRERER-------RRRERSRSRERDRRRSRSRSP----H 47
RSRSR+ RRRSRS +R R R RRR RSR+ R+RSRSRSP
Sbjct: 1993 RSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRR 2052
Query: 48 RRRSRSPRR---HRSTSPSPSRLKER 70
R RSR+PR RS + SP ++ R
Sbjct: 2053 RSRSRTPRTARGKRSLTRSPPAIRRR 2078
Score = 48.9 bits (115), Expect = 2e-06
Identities = 40/92 (43%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 3 RSRSRSPR-RERRRSRSTSRE---RERRRRERS---RSRERDRRRSRSRSPHRRRSRSPR 55
R RS SP+ R +RSRS SR R RRR+RS +S R R+RSRSRS RR R
Sbjct: 1759 RGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGS 1818
Query: 56 RHRSTSPS---PSRLKERRDEEKKETKETKSK 84
+ S SP+ SR RR + T T K
Sbjct: 1819 GYHSRSPARQESSRTSSRRRRGRSRTPPTSRK 1850
Score = 47.4 bits (111), Expect = 5e-06
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
RS S SPRRER++S ++++ R S S++R R +S + + + +R RST+P
Sbjct: 199 RSESSSPRRERKKS-----SKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTP 253
Query: 63 SP-SRLKERRDEEKKETKETKSKER 86
+P SR R + S+ R
Sbjct: 254 APKSRRAHRSTSADSASSSDTSRSR 278
Score = 47.4 bits (111), Expect = 5e-06
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSP--HRRRSRS-----PR 55
R RSR+P R+RSRS + +R RSR+ RRSRSR+P RRRSRS R
Sbjct: 1839 RGRSRTPPTSRKRSRSRTSPAPWKR-SRSRASPATHRRSRSRTPLISRRRSRSRTSPVSR 1897
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
R + S +R + R + ++S+ +T +T
Sbjct: 1898 RRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRT 1939
Score = 46.2 bits (108), Expect = 1e-05
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRS-----RSRSPHRR-RSRSP 54
MGRSRS + +R RS SR +R RSRS + R RS RSRSP RR RSRSP
Sbjct: 481 MGRSRSPA---TAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSP 537
Query: 55 R-----RHRSTSPSPSRLKERRDEEKKETKETKSKERQIT 89
+ R R+T RR + T+ + R T
Sbjct: 538 QRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRT 577
Score = 46.2 bits (108), Expect = 1e-05
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 29/112 (25%)
Query: 2 GRSRSRSPRRERRRSRS---------------------TSRERERRRRERSRSRERDRRR 40
G S+S S RR+R RSRS +SR RRRR RSR+ R+R
Sbjct: 1792 GSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKR 1851
Query: 41 SRSRSP----HRRRSRSP----RRHRSTSPSPSRLKERRDEEKKETKETKSK 84
SRSR+ R RSR+ RR RS +P SR + R + ++S+
Sbjct: 1852 SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSR 1903
Score = 45.8 bits (107), Expect = 1e-05
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 17 RSTSRERERRRRERSRSRERDR-RRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEK 75
R +S R +++ + +++DR RRS S SP R R +S ++ + S S S+ ++ R
Sbjct: 175 RESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTP 234
Query: 76 KETKETKSKERQ 87
K +++K K+R+
Sbjct: 235 KSKRKSKDKKRK 246
Score = 45.8 bits (107), Expect = 1e-05
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R +S S RR RS S +R R RSR+ + R SRSRSP RRSRS +R S
Sbjct: 469 RDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTK-RGHSRSRSPQWRRSRSAQRW-GRSR 526
Query: 63 SPSRLKERRDEEKKETKETKSKERQ 87
SP R R ++ +++ +R+
Sbjct: 527 SPQRRGRSRSPQRPGWSRSRNTQRR 551
Score = 45.8 bits (107), Expect = 1e-05
Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRR-----SRSPR-- 55
RSRSR+P RRRSRS + R+R RSRS RRRSRSR+P R +RSP
Sbjct: 2017 RSRSRTPPAIRRRSRSRTPLLPRKR-SRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAI 2075
Query: 56 RHRSTSPSPS 65
R RS S S S
Sbjct: 2076 RRRSASGSSS 2085
Score = 44.7 bits (104), Expect = 3e-05
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 20/102 (19%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSR--------------SRERDRRRSRSRSPHR 48
++ SR R + R R R R RRE++R SR R R RSRSR R
Sbjct: 1754 KTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRR 1813
Query: 49 RR------SRSPRRHRSTSPSPSRLKERRDEEKKETKETKSK 84
RR SRSP R S+ S R + R K ++S+
Sbjct: 1814 RRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSR 1855
Score = 43.9 bits (102), Expect = 6e-05
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRS-RSPHRRRSRSP---RRHR 58
RSRSRSP RRRSRS + R +R +RS RRRS S S R RS +P R H
Sbjct: 2041 RSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHS 2100
Query: 59 STSPSPSRLKERR 71
+ P L R
Sbjct: 2101 GSRTPPVALNSSR 2113
Score = 42.7 bits (99), Expect = 1e-04
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
+RSR+P R RR +S E E+SRS RRR + SP R + RR RS SP
Sbjct: 1716 TRSRTPPRHRRSPSVSSPEPA----EKSRS---SRRRRSASSP--RTKTTSRRGRSPSPK 1766
Query: 64 PSRLKERRDEEKKE-TKETKSKER 86
P L+ R ++E T+ T+ ++R
Sbjct: 1767 PRGLQRSRSRSRREKTRTTRRRDR 1790
Score = 41.2 bits (95), Expect = 4e-04
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRE----RDRRRSRSRSPHRRRSRSPRRHR 58
+S+ +S ++R+RSRST+ + RR RS S + D RSRSRS + + R
Sbjct: 235 KSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGR 294
Query: 59 STSPSPSRLKE---------RRDEEKKETKETKSKERQITEEDLEGKTEEE 100
S SP+ R E ++ + ET +K+ ED + +E+
Sbjct: 295 SPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEK 345
Score = 41.2 bits (95), Expect = 4e-04
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPH--RRRS---RSPRRH 57
RSRSR+P R+RSRS S RRR R +RS +RSP RRRS S R
Sbjct: 2029 RSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRS 2088
Query: 58 RSTSPSPSR 66
RS +P +R
Sbjct: 2089 RSATPPATR 2097
Score = 40.8 bits (94), Expect = 5e-04
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPH-RRRSRSPRRHRS-- 59
R SRS + +SR+ R R R + R RRSRS S RSR+P RHR
Sbjct: 1669 RRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSP 1728
Query: 60 --TSPSPSR----LKERRDEEKKETKETKSKER 86
+SP P+ + RR TK T + R
Sbjct: 1729 SVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR 1761
Score = 40.4 bits (93), Expect = 6e-04
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
+SRS RR RRS S+ R + RR RS S + R RSRS RR R R S S
Sbjct: 1738 KSRSSRR--RRSASSPRTKTTSRRGRSPS-PKPRGLQRSRSRSRREKTRTTRRRDRSGSS 1794
Query: 65 SRLKERRDEEKKETKETKSK 84
RR + ++ T+ +
Sbjct: 1795 QSTSRRRQRSRSRSRVTRRR 1814
Score = 40.0 bits (92), Expect = 8e-04
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 13 RRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRD 72
+RR+R + + S RE RS + +++ + R RS S SP R +++
Sbjct: 154 QRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSS 213
Query: 73 EEKKETKETKSKERQ 87
++KK E++SK+R+
Sbjct: 214 KKKKHRSESESKKRK 228
Score = 40.0 bits (92), Expect = 8e-04
Identities = 32/80 (40%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 2 GRSRSRSPRR---ERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR----RSRSP 54
G RSRSPR+ R SRS S RRR + RD++ S S RR SRSP
Sbjct: 2671 GERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSP 2730
Query: 55 ---RRHRSTSPSPSRLKERR 71
RR + SP P R + R
Sbjct: 2731 SHKRRRETPSPRPMRHRSSR 2750
Score = 37.7 bits (86), Expect = 0.004
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR---RSRSPRRHRST 60
S++RS R +R + R R RS + + R RSRSR+P +R RSRSP+ RS
Sbjct: 459 SKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAK-RGRSRSRTPTKRGHSRSRSPQWRRSR 517
Query: 61 SP---SPSRLKERRDEEKKETKETKSKER 86
S SR +RR + + S+ R
Sbjct: 518 SAQRWGRSRSPQRRGRSRSPQRPGWSRSR 546
Score = 37.7 bits (86), Expect = 0.004
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
RSRS S + R S S E +SR RR SRS + +SR+P R RS+
Sbjct: 1635 RSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTA-RRGSRSSPEPKTKSRTPPRRRSSRS 1693
Query: 63 SPSRLKE----RRDEEKKETKETKSK 84
SP ++ RR + ET+S+
Sbjct: 1694 SPELTRKARLSRRSRSASSSPETRSR 1719
Score = 37.4 bits (85), Expect = 0.005
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 2 GRSRSRSPRRER-----RRSRSTS-----RERERRRRERSRSRERDRRRSR--------- 42
GRS S S R+ + RRSRS S + R RR RS S R + +SR
Sbjct: 722 GRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSG 781
Query: 43 -SRSPHRRRSRSPRRHRSTSPSP---SRLKERRDEEK-----KETKETKSKE 85
S P ++ PRR RS S P SR RR K+ +T S++
Sbjct: 782 SSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQ 833
Score = 37.0 bits (84), Expect = 0.007
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 25/120 (20%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERR---RRERS-------RSRERDRRRSRSRSPHRRRS 51
GRS SR+P+R R S+ R+ + R RR RS +SR RRSRS S R ++
Sbjct: 711 GRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSR-ISSRRSRSLSSPRSKA 769
Query: 52 RS--------------PRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
+S P++ T P SR + + K T +S+ + KT
Sbjct: 770 KSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKT 829
Score = 35.4 bits (80), Expect = 0.020
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 24/119 (20%)
Query: 3 RSRSRSPRRERRRSRST------SRERERRRRERSRSRERDRRRSRSRS----------- 45
++++R+P R+R RS S+ SR RR R S +D+ R+ R+
Sbjct: 1566 KAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPK 1625
Query: 46 -------PHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
P R RS S + R SP S E E +++ + R E + +T
Sbjct: 1626 APAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRT 1684
Score = 35.4 bits (80), Expect = 0.020
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPH-RRRSRSPRRHRST 60
G S + S +SR+ R +++SR RRRS SP R++R RR RS
Sbjct: 1651 GSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSA 1710
Query: 61 SPSP 64
S SP
Sbjct: 1711 SSSP 1714
Score = 34.7 bits (78), Expect = 0.034
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRR--HRST 60
+ +S++P RRSRS S + + + R R R RS S P +++S++P R H S+
Sbjct: 787 KQKSQTP---PRRSRSGSSQPKAKSRTPPR-----RSRSSSSPPPKQKSKTPSRQSHSSS 838
Query: 61 SPSPSRLKERRDEEKKETKETKSKERQITEE 91
SP P ++K + ++ E+ +T +
Sbjct: 839 SPHP-KVKSGTPPRQGSITSPQANEQSVTPQ 868
Score = 33.1 bits (74), Expect = 0.098
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 6 SRSPRRERRRSRSTSR---ERERRRRERSRSRERDRRRSRSRSPHRRRSR---SPRRHRS 59
+R+P +R RS S+ + +ERS S ++++R+P R+RSR SP
Sbjct: 1529 ARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSK 1588
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKK 119
+ SP R + E K+ + + ++ E K + + S +G
Sbjct: 1589 SRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPS 1648
Query: 120 VDGS 123
+GS
Sbjct: 1649 PEGS 1652
Score = 31.6 bits (70), Expect = 0.29
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 6 SRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSR-SPRRHRSTSPS- 63
S PR+ RS S + + + R+R S S SP R SR +PRR RS SP
Sbjct: 902 STPPRQSPSRSSSP----QPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCS 957
Query: 64 --PSRLKERRDEEKKETKETKSK 84
SRL R + +TK K
Sbjct: 958 NVESRLLPRYSHSGSSSPDTKVK 980
Score = 30.4 bits (67), Expect = 0.64
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR-----------RS 51
+ +S++P R+ S S + + R S + +S +P RR +S
Sbjct: 824 KQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKS 883
Query: 52 RSPRRHRSTSPSPSRLKE----RRDEEKKETKETKSK 84
R+P RH + SP R+K R+ + + + K K
Sbjct: 884 RTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVK 920
Score = 30.4 bits (67), Expect = 0.64
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRR-----RSRSRSPHR---RRSRSP 54
R RSRSP ++ + +RER E S ++ R RSRS S + S SP
Sbjct: 1494 RPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASP 1553
Query: 55 RRHRSTSPSP-----SRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
+ + SP +R R+ + E SK R G + E
Sbjct: 1554 QERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPE 1603
Score = 28.5 bits (62), Expect = 2.4
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 9 PRRERRRSRSTSRERERRR-----RERSRSRERDRRRSRSRSPHRRRSRS-PRRHRSTSP 62
P+ R RSRS S + RERS S +++ +R+P +RSRS + P
Sbjct: 1490 PQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKP 1549
Query: 63 SPSRLKERRDEEKKETK-ETKSKERQ 87
S S + + ++K +T++ RQ
Sbjct: 1550 SASPQERSESDSSPDSKAKTRTPLRQ 1575
Score = 27.7 bits (60), Expect = 4.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
GR +P + +RRS S+S S S S S S S S S+S
Sbjct: 2593 GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SSS 2648
Query: 62 PSPSR 66
PSP++
Sbjct: 2649 PSPAK 2653
Score = 26.9 bits (58), Expect = 7.0
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRE----RSRSRERDRRRSRSRSPHRRRSRSPRRHR 58
+S S SP + + S R R SRS R R S SP + SP + R
Sbjct: 1078 QSHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLKSGMSPEQSR 1137
Query: 59 STSPSPS----RLKERRDEEKKETKETKSKERQITEED 92
S S S + + ET E+K K +ED
Sbjct: 1138 FQSDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQED 1175
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 74.3 bits (181), Expect = 4e-14
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 39/156 (25%)
Query: 3 RSRSRSPRRER-------RRSRSTSRERERR-------------------RRERSRSRER 36
R RS+SPRR R RRSRSTS+ R+++ RR RS SRER
Sbjct: 284 RRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRER 343
Query: 37 DRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEK--------KETKETKSKERQI 88
RRRSRS + ++ RSP+R S SPSP R K+ + ++K +E +K K+ +
Sbjct: 344 RRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKD 403
Query: 89 TEEDLEGKTEEEIEMMKLM-----GFASFDSTKGKK 119
E+D E K+E + ++ ++ +DS K KK
Sbjct: 404 KEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKK 439
Score = 68.6 bits (166), Expect = 2e-12
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRR-HRSTSP 62
SRSRS R RRR+ S+SR R R R R RS + R R RS+SP RRRS S R RS S
Sbjct: 249 SRSRS-RSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRST 307
Query: 63 SPSRLKERRDEEKKETK 79
S +R K++ D+EKK +K
Sbjct: 308 SKTRDKKKEDKEKKRSK 324
Score = 66.2 bits (160), Expect = 1e-11
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 10 RRERRRSRSTSRERERRRRERS-----RSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
++E +R S SR R RRRR S RSR R RRRS S+S RRRS+SPRR RS S
Sbjct: 241 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER 300
Query: 65 SRLKERRDEEKKETKETKSKERQIT 89
R + + + KE K K+R T
Sbjct: 301 GRRSRSTSKTRDKKKEDKEKKRSKT 325
Score = 50.1 bits (118), Expect = 8e-07
Identities = 37/82 (45%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 21 RERERRRRERSRSRERDRRRSRSRSPHRR-RSRSPRRHRSTSPSPSRLKERR-----DEE 74
++ E+RR RSRSR R RRR+ S S HRR RSRS RR S S S R K R E
Sbjct: 241 KKEEKRRHSRSRSRSR-RRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRE 299
Query: 75 KKETKETKSKERQITEEDLEGK 96
+ + SK R +ED E K
Sbjct: 300 RGRRSRSTSKTRDKKKEDKEKK 321
Score = 45.8 bits (107), Expect = 1e-05
Identities = 27/118 (22%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
+ RSP+R+ RS S R ++ +++++ + R RD R + + + + R R +
Sbjct: 357 KPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDK 416
Query: 65 SRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKKVDG 122
+ RD +++E KE++ ++ +E + + E G + DS + KV+G
Sbjct: 417 DVKQVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKG--TGDSLRESKVNG 472
Score = 45.4 bits (106), Expect = 2e-05
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR------------RERSRSRERDRRRSRSRSPHRRR 50
RSRS S R RRRSRS +R ++ R R + +++D+ + RSR R R
Sbjct: 335 RSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRD-ERER 393
Query: 51 SRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
S S ++ K D++ K+ +E Q + + E K E++
Sbjct: 394 STSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEEKK 443
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 73.6 bits (179), Expect = 7e-14
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
GRSRS + R +SRS+S+ RR+R +S+ R R RSRSR RRRS+SP + RS S
Sbjct: 306 GRSRSHT----RSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKS 361
Query: 62 PS--PSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKK 119
SR + +++K+T+E ++ ++ E+D E + E E E K + +GK
Sbjct: 362 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREK-------EKERGKN 414
Query: 120 VDGSVNAYAINVSQKRKYRQYMNRK 144
D K K R+ K
Sbjct: 415 KDRDKEREKDREKDKEKDREREREK 439
Score = 60.5 bits (145), Expect = 6e-10
Identities = 28/96 (29%), Positives = 53/96 (55%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
+ RS RERR+SRS S R++R+ R + +E++R + + R R R + + + +
Sbjct: 356 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNK 415
Query: 65 SRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R KER + +K+ ++ + +ER+ E K +E+
Sbjct: 416 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK 451
Score = 59.7 bits (143), Expect = 1e-09
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 10 RRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP---SR 66
R++ ++SR+ R RR RS SRER RRRSRS S R S++ +R S SPSP ++
Sbjct: 471 RKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNK 530
Query: 67 LKERRDEEKKETKETKSKERQI----TEEDLEGKTEEEIEMMKLMGFASFDSTKGKKVDG 122
++R++E+ E + +ER + D +GK + E L + K+ D
Sbjct: 531 KDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLK-----EKEHNKEPDS 585
Query: 123 SVN 125
SV+
Sbjct: 586 SVS 588
Score = 55.8 bits (133), Expect = 1e-08
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 3 RSRSRSPRRERRRSRSTSRERER----------RRRERSRSRERDRRRSRSRSPHRRRSR 52
+ RS+S R + RSRS SR++ + R +E+ R +ER+R + R + R +++
Sbjct: 356 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNK 415
Query: 53 SPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASF 112
+ R + K+R E +KE ++ + KE+ E++ + + E E + K +
Sbjct: 416 DRDKEREKDREKDKEKDREREREKEHEKDRDKEK---EKEQDKEKEREKDRSKEIDEKRK 472
Query: 113 DSTKGKKVDGSVNAYAINVSQKRKYRQYMNR 143
K + S NA + S R+ R+ +R
Sbjct: 473 KDKKSRTPPRSYNASRRSRSSSRERRRRRSR 503
Score = 53.1 bits (126), Expect = 9e-08
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 38/134 (28%)
Query: 3 RSRSRSPRRERRRSRSTSRE-----------------RERRRRERSRSRERD---RRRSR 42
RSRS S R RRRSRS+SR R R ++++ R +ERD RR R
Sbjct: 489 RSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRER 548
Query: 43 SRSPHRRRSRSPR---------------RHRSTSPSPSRLKERRDEEKKETKETKSKER- 86
RS R+S + R + + P S KE D++ T+E K +
Sbjct: 549 ERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQHNG 608
Query: 87 --QITEEDLEGKTE 98
Q+ EE+L KTE
Sbjct: 609 NCQLNEENLSTKTE 622
Score = 48.9 bits (115), Expect = 2e-06
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 20 SRERERRRRERSRSRERDRRRSRSRSPHRR-RSRSPRRHRSTSPSPSRLKERRDEEKKET 78
S + R+ RSRS R + RS S+S RR RS+S R RS + S SR K+RR +
Sbjct: 297 SGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHK 356
Query: 79 KETKSKERQ 87
K +KS+ER+
Sbjct: 357 KRSKSRERR 365
Score = 46.2 bits (108), Expect = 1e-05
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSR---SRSPHR-----RRSRS 53
R R R E+ R + +E+++ + RE+ RS+E D +R + SR+P R RRSRS
Sbjct: 433 REREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRS 492
Query: 54 P------RRHRSTSPSP----------SRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
RR RS+S SP SR R KK+ K K ++ + E T
Sbjct: 493 SSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERST 552
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 73.6 bits (179), Expect = 7e-14
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
GRSRS + R +SRS+S+ RR+R +S+ R R RSRSR RRRS+SP + RS S
Sbjct: 190 GRSRSHT----RSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKS 245
Query: 62 PS--PSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKK 119
SR + +++K+T+E ++ ++ E+D E + E E E K + +GK
Sbjct: 246 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREK-------EKERGKN 298
Query: 120 VDGSVNAYAINVSQKRKYRQYMNRK 144
D K K R+ K
Sbjct: 299 KDRDKEREKDREKDKEKDREREREK 323
Score = 60.5 bits (145), Expect = 6e-10
Identities = 28/96 (29%), Positives = 53/96 (55%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
+ RS RERR+SRS S R++R+ R + +E++R + + R R R + + + +
Sbjct: 240 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNK 299
Query: 65 SRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R KER + +K+ ++ + +ER+ E K +E+
Sbjct: 300 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK 335
Score = 59.7 bits (143), Expect = 1e-09
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 10 RRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP---SR 66
R++ ++SR+ R RR RS SRER RRRSRS S R S++ +R S SPSP ++
Sbjct: 355 RKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNK 414
Query: 67 LKERRDEEKKETKETKSKERQI----TEEDLEGKTEEEIEMMKLMGFASFDSTKGKKVDG 122
++R++E+ E + +ER + D +GK + E L + K+ D
Sbjct: 415 KDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLK-----EKEHNKEPDS 469
Query: 123 SVN 125
SV+
Sbjct: 470 SVS 472
Score = 55.8 bits (133), Expect = 1e-08
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 3 RSRSRSPRRERRRSRSTSRERER----------RRRERSRSRERDRRRSRSRSPHRRRSR 52
+ RS+S R + RSRS SR++ + R +E+ R +ER+R + R + R +++
Sbjct: 240 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNK 299
Query: 53 SPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASF 112
+ R + K+R E +KE ++ + KE+ E++ + + E E + K +
Sbjct: 300 DRDKEREKDREKDKEKDREREREKEHEKDRDKEK---EKEQDKEKEREKDRSKEIDEKRK 356
Query: 113 DSTKGKKVDGSVNAYAINVSQKRKYRQYMNR 143
K + S NA + S R+ R+ +R
Sbjct: 357 KDKKSRTPPRSYNASRRSRSSSRERRRRRSR 387
Score = 53.1 bits (126), Expect = 9e-08
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 38/134 (28%)
Query: 3 RSRSRSPRRERRRSRSTSRE-----------------RERRRRERSRSRERD---RRRSR 42
RSRS S R RRRSRS+SR R R ++++ R +ERD RR R
Sbjct: 373 RSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRER 432
Query: 43 SRSPHRRRSRSPR---------------RHRSTSPSPSRLKERRDEEKKETKETKSKER- 86
RS R+S + R + + P S KE D++ T+E K +
Sbjct: 433 ERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENKIQHNG 492
Query: 87 --QITEEDLEGKTE 98
Q+ EE+L KTE
Sbjct: 493 NCQLNEENLSTKTE 506
Score = 48.9 bits (115), Expect = 2e-06
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 20 SRERERRRRERSRSRERDRRRSRSRSPHRR-RSRSPRRHRSTSPSPSRLKERRDEEKKET 78
S + R+ RSRS R + RS S+S RR RS+S R RS + S SR K+RR +
Sbjct: 181 SGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHK 240
Query: 79 KETKSKERQ 87
K +KS+ER+
Sbjct: 241 KRSKSRERR 249
Score = 46.2 bits (108), Expect = 1e-05
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSR---SRSPHR-----RRSRS 53
R R R E+ R + +E+++ + RE+ RS+E D +R + SR+P R RRSRS
Sbjct: 317 REREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRS 376
Query: 54 P------RRHRSTSPSP----------SRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
RR RS+S SP SR R KK+ K K ++ + E T
Sbjct: 377 SSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERST 436
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 72.4 bits (176), Expect = 1e-13
Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSR-------SPR 55
R +SRS RER++SRS SRER+RR R RSRSR R R R+RSRS R RSR PR
Sbjct: 93 RKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPR 152
Query: 56 R-HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDS 114
R RS S +PS R + +E ++ + ++ E + +E +E K A+ +
Sbjct: 153 RFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAA 212
Query: 115 TKG 117
T G
Sbjct: 213 TGG 215
Score = 66.6 bits (161), Expect = 8e-12
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR---RSRSPRRHRSTS 61
R RS RER++SRS SRE R++ RSRSRER + RSRSR RR RSRS RHR +
Sbjct: 75 RHRSRSRERKKSRSRSRE---RKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 131
Query: 62 PSPSRLKERRDEEKKETKETKSKERQIT 89
S SR + R + KK ++ + R ++
Sbjct: 132 RSRSRTRSRSRDRKKRIEKPRRFSRSLS 159
Score = 64.7 bits (156), Expect = 3e-11
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 7 RSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSR 66
R R+ER+ SR S R R R R RSR R+R++SRSRS R++SRS R R S S SR
Sbjct: 52 RHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSR 111
Query: 67 LKERRDEEKKETK-----ETKSKER 86
++RR + ++ T+S+ R
Sbjct: 112 ERKRRIRSRSRSRSRHRHRTRSRSR 136
Score = 64.3 bits (155), Expect = 4e-11
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 12/97 (12%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRR---RSRSRSPHRRRSRSPRRHRS 59
R +SRS RER++SRS SRER ++ RSRSRER RR RSRSRS HR R+RS R R
Sbjct: 83 RKKSRSRSRERKKSRSRSRER---KKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR- 138
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGK 96
SR ++R+ +K + ++S R + G+
Sbjct: 139 -----SRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGR 170
Score = 52.4 bits (124), Expect = 2e-07
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 2 GRSRSRSPR----RERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
GR R S R +R+ R +SR R RSRSRER R RSRSR + RSRS R
Sbjct: 39 GRERLNSSENGEDRHKRKERKSSRGRSH---SRSRSRER-RHRSRSRERKKSRSRSRERK 94
Query: 58 RSTSPSPSRLKER-RDEEKKETKETKSKER 86
+S S S R K R R E+K ++S+ R
Sbjct: 95 KSRSRSRERKKSRSRSRERKRRIRSRSRSR 124
Score = 50.8 bits (120), Expect = 5e-07
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSP-HRRRSRSPRRHRSTS 61
+ S RER S +R +R+ ER SR R RSRSR HR RSR ++ RS S
Sbjct: 32 KEHSSDKGRERLNSSENGEDRHKRK-ERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRS 90
Query: 62 PSPSRLKERRDEEKKETKETKSKERQI 88
+ + R E KK ++ ++R+I
Sbjct: 91 RERKKSRSRSRERKKSRSRSRERKRRI 117
Score = 43.5 bits (101), Expect = 7e-05
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 6 SRSPRRERRRSRSTSRERERRRRERS-----RSRERDRRRSRSRSPHRRRSRSPRRHRST 60
S+ + E + S ++ R R S R + ++R+ SR RS R RSR RRHRS
Sbjct: 21 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRE-RRHRSR 79
Query: 61 SPSPSRLKERRDEEKK------ETKETKSKERQ 87
S + + R E KK E K+++S+ R+
Sbjct: 80 SRERKKSRSRSRERKKSRSRSRERKKSRSRSRE 112
Score = 39.3 bits (90), Expect = 0.001
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 10 RRERRRSRSTSRERERRRRERSRSRERDRRRSRS----RSPHRRRSRSPRRHRSTSPSPS 65
RR + +S+ + + ++ S ++ R R S H+R+ R R RS S S S
Sbjct: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
Query: 66 RLKERRDEEKKETKETKSKERQ 87
R + R +E K+++S+ R+
Sbjct: 72 R-ERRHRSRSRERKKSRSRSRE 92
Score = 26.6 bits (57), Expect = 9.2
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 54 PRRHRSTSPSPSRLKERRDEEKK----ETKETKSKERQITEEDLEGKTEEEIEMMKLMGF 109
P + + +P + E+ + K + + KS+ +I E+ G ++ ++ KLMG
Sbjct: 256 PSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGI 315
Query: 110 ASFDSTKGKKVD 121
S D VD
Sbjct: 316 KSEDEAGCSSVD 327
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 72.4 bits (176), Expect = 1e-13
Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSR-------SPR 55
R +SRS RER++SRS SRER+RR R RSRSR R R R+RSRS R RSR PR
Sbjct: 152 RKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPR 211
Query: 56 R-HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDS 114
R RS S +PS R + +E ++ + ++ E + +E +E K A+ +
Sbjct: 212 RFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIAAAAA 271
Query: 115 TKG 117
T G
Sbjct: 272 TGG 274
Score = 66.6 bits (161), Expect = 8e-12
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR---RSRSPRRHRSTS 61
R RS RER++SRS SRE R++ RSRSRER + RSRSR RR RSRS RHR +
Sbjct: 134 RHRSRSRERKKSRSRSRE---RKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 190
Query: 62 PSPSRLKERRDEEKKETKETKSKERQIT 89
S SR + R + KK ++ + R ++
Sbjct: 191 RSRSRTRSRSRDRKKRIEKPRRFSRSLS 218
Score = 64.7 bits (156), Expect = 3e-11
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 7 RSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSR 66
R R+ER+ SR S R R R R RSR R+R++SRSRS R++SRS R R S S SR
Sbjct: 111 RHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSR 170
Query: 67 LKERRDEEKKETK-----ETKSKER 86
++RR + ++ T+S+ R
Sbjct: 171 ERKRRIRSRSRSRSRHRHRTRSRSR 195
Score = 64.3 bits (155), Expect = 4e-11
Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 12/97 (12%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRR---RSRSRSPHRRRSRSPRRHRS 59
R +SRS RER++SRS SRER ++ RSRSRER RR RSRSRS HR R+RS R R
Sbjct: 142 RKKSRSRSRERKKSRSRSRER---KKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR- 197
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGK 96
SR ++R+ +K + ++S R + G+
Sbjct: 198 -----SRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGR 229
Score = 52.4 bits (124), Expect = 2e-07
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 2 GRSRSRSPR----RERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
GR R S R +R+ R +SR R RSRSRER R RSRSR + RSRS R
Sbjct: 98 GRERLNSSENGEDRHKRKERKSSRGRSH---SRSRSRER-RHRSRSRERKKSRSRSRERK 153
Query: 58 RSTSPSPSRLKER-RDEEKKETKETKSKER 86
+S S S R K R R E+K ++S+ R
Sbjct: 154 KSRSRSRERKKSRSRSRERKRRIRSRSRSR 183
Score = 50.8 bits (120), Expect = 5e-07
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSP-HRRRSRSPRRHRSTS 61
+ S RER S +R +R+ ER SR R RSRSR HR RSR ++ RS S
Sbjct: 91 KEHSSDKGRERLNSSENGEDRHKRK-ERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRS 149
Query: 62 PSPSRLKERRDEEKKETKETKSKERQI 88
+ + R E KK ++ ++R+I
Sbjct: 150 RERKKSRSRSRERKKSRSRSRERKRRI 176
Score = 46.2 bits (108), Expect = 1e-05
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 8 SPRRERRRSRST-----SRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
SP R++++ +S + R RSRSRER R+ HR RSRS R S
Sbjct: 17 SPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESK 76
Query: 63 SPSRLKERRDEEK-KETKETKSKERQITEEDLEGK 96
S K + +E KE K +ER + E+ E +
Sbjct: 77 DKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDR 111
Score = 45.8 bits (107), Expect = 1e-05
Identities = 43/133 (32%), Positives = 56/133 (42%), Gaps = 49/133 (36%)
Query: 3 RSRSRSPRRERR--------RSRSTSRE-----------------------------RER 25
RSRSRS R+R+ RSRS S+E RER
Sbjct: 42 RSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRER 101
Query: 26 -----------RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEE 74
+R+ER SR R RSRSR R RSRS R +S S S R K R
Sbjct: 102 LNSSENGEDRHKRKERKSSRGRSHSRSRSRE-RRHRSRSRERKKSRSRSRERKKSRSRSR 160
Query: 75 KKETKETKSKERQ 87
+++ ++S+ER+
Sbjct: 161 ERKKSRSRSRERK 173
Score = 45.1 bits (105), Expect = 2e-05
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 7 RSPRRERRRSRSTSRERERR-----RRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R+ + RSRS SRER+R+ R+ RSRSR ++ RR S+ ++ +S H
Sbjct: 34 RASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKS-EEHNDKE 92
Query: 62 PSPSRLKERRDEEKKETKETKSKERQ 87
S + +ER + + K KER+
Sbjct: 93 HSSDKGRERLNSSENGEDRHKRKERK 118
Score = 43.9 bits (102), Expect = 6e-05
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
SRSRS RER+R +S + R+ R R RS+ R + +S H+ + + H S
Sbjct: 41 SRSRSRSRERKR-KSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGR 99
Query: 64 PSRLKERRDEEKKETKETKS 83
E++ + KE KS
Sbjct: 100 ERLNSSENGEDRHKRKERKS 119
Score = 43.1 bits (100), Expect = 9e-05
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRS----RSPHRRRSRSPRRHR 58
RSRS+ RR + +S+ + + ++ S ++ R R S H+R+ R R R
Sbjct: 64 RSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGR 123
Query: 59 STSPSPSR-------LKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
S S S SR +ER+ + + KS+ R + ++ E
Sbjct: 124 SHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRE 171
Score = 29.6 bits (65), Expect = 1.1
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 18 STSRERERRRRERSRSRERDRRRSRSR---SP-----HRRRSRSPRRHRSTSPSPSRLKE 69
++ ER+ E++ S +RD+++ +S SP H RSRS R R K
Sbjct: 3 ASDTERDGLAPEKT-SPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKH 61
Query: 70 RRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R KE + +SK++ + E ++E
Sbjct: 62 RSRSRSKEGRRHESKDKSSKKHKSEEHNDKE 92
Score = 26.6 bits (57), Expect = 9.2
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 54 PRRHRSTSPSPSRLKERRDEEKK----ETKETKSKERQITEEDLEGKTEEEIEMMKLMGF 109
P + + +P + E+ + K + + KS+ +I E+ G ++ ++ KLMG
Sbjct: 315 PSYYNPAAVNPMKFAEQEKKRKMLWQGKKEGDKSQSAEIWEKLNFGNKDQNVKFRKLMGI 374
Query: 110 ASFDSTKGKKVD 121
S D VD
Sbjct: 375 KSEDEAGCSSVD 386
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 69.7 bits (169), Expect = 9e-13
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 23/140 (16%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRR------------ 50
RSRSRS R R +SRS S+ R R ++E+SRS +++ RSRS S + R
Sbjct: 219 RSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQ 278
Query: 51 ---------SRSPRRHRSTSPSPSRLKERRDEEKK--ETKETKSKERQITEEDLEGKTEE 99
SRSP RH+S S S SR +ERR EE+K +S+E+ + + +++
Sbjct: 279 NNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKG 338
Query: 100 EIEMMKLMGFASFDSTKGKK 119
S D KG+K
Sbjct: 339 GSRSRSRSRSKSKDKRKGRK 358
Score = 63.2 bits (152), Expect = 9e-11
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 29/176 (16%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERR-------------------RRERSRSRE----RD 37
+G+ +SRSP R + +S+S SR +ERR R+ RSRSR R
Sbjct: 283 VGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRS 342
Query: 38 RRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEE---KKETKETKSKERQITEEDLE 94
R RSRS+S +R+ R R S S S SR K R + K+++K SK+++ + D
Sbjct: 343 RSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRS 402
Query: 95 GKTEEEIEMMKLMGFASFDSTKGKKVDGSVNAYAINVSQKRKYRQYMNRKGGFNRP 150
+ K A +S++ + S NA +Q+ + R N K N P
Sbjct: 403 QSRSPSRSVSKEREHAKSESSQREGRGESENA---GTNQETRSRSRSNSKSKPNLP 455
Score = 58.9 bits (141), Expect = 2e-09
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 4 SRSRSPRRERRRSRSTSRERER-------RRRERSRSRERDRRRSRSRSPHRRRSRSPRR 56
SRSRS R R RSR + + R R + RSRSR R RS+SRS + RSRS ++
Sbjct: 186 SRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRS-KK 244
Query: 57 HRSTSPSPSRLKERRDEEKKETKETKSK-ERQITEEDLEGKTEEEIEMMKLMGFASFDST 115
+S SPS + + R K ++K + E +I D GK + S +
Sbjct: 245 EKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRS 304
Query: 116 KGKKVD----GSVNAYAINVSQKRKYRQYMNRKGG 146
+ ++V+ GSV+ R+ R KGG
Sbjct: 305 QERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGG 339
Score = 56.2 bits (134), Expect = 1e-08
Identities = 40/97 (41%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 9 PRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLK 68
P RRRS S SR RSRSR R R+SRSRS + S S R RS S S SR K
Sbjct: 177 PGSRRRRSYSRSRS-----HSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSK 231
Query: 69 ER-----RDEEKKETKETKSKERQITEEDLEGKTEEE 100
R R KKE + SKE+ + GK+ +
Sbjct: 232 SRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSK 268
Score = 50.1 bits (118), Expect = 8e-07
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 17/85 (20%)
Query: 3 RSRSRSPRRERRRSRSTSRERERR-----------RRERSRSRERDR------RRSRSRS 45
RS SRS +ER ++S S +RE R R RSRS + + RSRS+S
Sbjct: 405 RSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKS 464
Query: 46 PHRRRSRSPRRHRSTSPSPSRLKER 70
+ RSRS R RS S SPSR + R
Sbjct: 465 ASKTRSRSKSRSRSASRSPSRSRSR 489
Score = 44.3 bits (103), Expect = 4e-05
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 2 GRSRSRSPRRERR-RSRSTSRERERRRRE-RSRSRERDRRRSRSRSPHRRRSRSPRRHRS 59
G S + +E R RSRS S+ + E RSRS+ + RSRS+S R SRSP R RS
Sbjct: 429 GESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRS 488
Query: 60 TSPSPS 65
S S S
Sbjct: 489 RSHSRS 494
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 68.9 bits (167), Expect = 2e-12
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 3 RSRSRSPRRER----RRSRSTSRERERRRRERSRSRE-RDRRRSRSRSPHRRRSRSPRRH 57
RS S++P+R R RR RS S RER+RR RS+SRE R R RSRS S R RS RH
Sbjct: 262 RSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRH 321
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKG 117
S S R K R +E+ ++ S +R + D + + + + S++S G
Sbjct: 322 SSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKR-----SYESANG 376
Query: 118 KKVD 121
+ D
Sbjct: 377 RSED 380
Score = 57.4 bits (137), Expect = 5e-09
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERS------RSRERDRRRSRSRSPHRRRSRSPR- 55
+ R+ R +RR ERE+ RR RS RSR R+ RR RSRS R R R R
Sbjct: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRS 294
Query: 56 -----RHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEI 101
RHR S S SR + R + + + +S+ER E ++++
Sbjct: 295 KSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDL 345
Score = 55.1 bits (131), Expect = 2e-08
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERD------RRRSRSRSPHRRRSRSPRR 56
RSRSRS +R R SR SRER +RR + R R++D R SR RSP R R R ++
Sbjct: 310 RSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSP-RDRDRKDKK 368
Query: 57 HRSTSPSPSRLKERRDEEKKETKE 80
RS + R ++RR E++E E
Sbjct: 369 -RSYESANGRSEDRRSSEEREAGE 391
Score = 51.6 bits (122), Expect = 3e-07
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 3 RSRSRSPRRERR---RSRSTSRERER-----RRRERSRSRERDRRRSRSRSPHRRRSRSP 54
+ R+RS RE+R RSRS+SR R R R R RSRER +RRS + S
Sbjct: 289 KRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASC 348
Query: 55 RRHRSTSPSPSRLKERRDEEKK-ETKETKSKERQITEEDLEGK 96
R RS+ R ++R+D+++ E+ +S++R+ +EE G+
Sbjct: 349 DRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 68.6 bits (166), Expect = 2e-12
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R R RER R+R RERER R RER R ERDR + R R R+ R+R T
Sbjct: 301 RERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTG 360
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R ER E ++E ++ER+ E D + ++E E
Sbjct: 361 REGRRQAERERERERERDRQSAREREERERDRDRDRQKERE 401
Score = 65.9 bits (159), Expect = 1e-11
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRR-RSRSRSPHRRRSRSPRRHRSTS 61
R R + RER R T R++E R RER R R+RDRR + R R R+R R R R T
Sbjct: 240 REREKQAERERASERETERDKE-RERERDRDRDRDRRQKERERQTDRKRQRRTERDRETE 298
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R +ER E ++ K + +ER+ E + + +TE + E
Sbjct: 299 RKRERQRERERERERNRKRERERERE-RERERQRETERDRE 338
Score = 65.9 bits (159), Expect = 1e-11
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 3 RSRSRSPRRERRRSRSTSRERE-RRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R + R + +R+R R T R+RE R+RER R RER+R R+R R R R R R R T
Sbjct: 275 RQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRET- 333
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R KER + K++T+ + + RQ EG+ + E E
Sbjct: 334 -ERDREKERERKRKRQTEMDRERNRQTGR---EGRRQAERE 370
Score = 64.3 bits (155), Expect = 4e-11
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHR-- 58
GR R +RER R R +ERER+ RER R ER+R++ R R +R+ R R R
Sbjct: 138 GRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREK 197
Query: 59 --STSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
T S R+ E++ ET+ K + E D + KTE E E
Sbjct: 198 ENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERERE 243
Score = 64.3 bits (155), Expect = 4e-11
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R R RER R R T R+RE+ R R+R R E DR R+R RR R R
Sbjct: 317 RERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERE 376
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
+ER + E+ ++ + + + TE+D +G+ E E
Sbjct: 377 RDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETE 415
Score = 63.9 bits (154), Expect = 5e-11
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R RER R R R+R ++ RER R+R RR R R R+R R R R
Sbjct: 254 RETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERER 313
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEM 103
+ R +ER E ++E + ++R E++ E K + + EM
Sbjct: 314 NRKRERERERERERERQRETERDR---EKERERKRKRQTEM 351
Score = 62.8 bits (151), Expect = 1e-10
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 5 RSRSPRRERRRSRSTSRERER-RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
R R R+R R R RERER R+RER R RER+R R R R + R +R R T
Sbjct: 293 RDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMD 352
Query: 64 PSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R ++ E +++ + + +ER+ + + E E
Sbjct: 353 RERNRQTGREGRRQAERERERERERDRQSAREREERE 389
Score = 61.2 bits (147), Expect = 3e-10
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 3 RSRSRSPRRERRRS-RSTSRERER---RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHR 58
R R+R RERRR R T RE +R RRRE+ R R+RDR R R R + R R R R
Sbjct: 54 RERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRER 113
Query: 59 STSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R +++ E + E + + ++RQ T+ E + + + E
Sbjct: 114 DRQREKERNRQKERERETEREGERGRDRQ-TDGQRERERQRDAE 156
Score = 60.8 bits (146), Expect = 4e-10
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRR-ERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R + R +R+R R R RE+ER R+ +R R R+R++ R+R + R R R R
Sbjct: 83 REKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQ 142
Query: 62 PSPSRLKER-RDEEKKETKETKSKERQITEEDLEGKTEEE 100
R +ER RD EK+ ++T + ++ TE + + + E E
Sbjct: 143 TDGQRERERQRDAEKERERQTDRERQRQTERNRQKERERE 182
Score = 60.5 bits (145), Expect = 6e-10
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSR--------SRSPHRRRSRSP 54
R+ R R++ R R R+R+R RR++ R R+ DR+R R R R+R R
Sbjct: 250 RASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERER 309
Query: 55 RRHRSTSPSPSRLKERRDEEKKETKETKSKERQ 87
R R+ R +ER E ++ET+ + KER+
Sbjct: 310 ERERNRKRERERERERERERQRETERDREKERE 342
Score = 60.1 bits (144), Expect = 8e-10
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRER--------------DRRRSRSRSPHR 48
R ++R RRER R R + E R ER R RER DR R R R R
Sbjct: 181 REKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTER 240
Query: 49 RRSRSPRRHRSTSPSPSRLKER---RDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R + R R++ R KER RD ++ + K +ERQ T+ + +TE + E
Sbjct: 241 EREKQAERERASERETERDKERERERDRDRDRDRRQKERERQ-TDRKRQRRTERDRE 296
Score = 58.9 bits (141), Expect = 2e-09
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R RER R R ++RERE R R+R R R+++R R + +R +R R
Sbjct: 365 RQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDR 424
Query: 63 SPSRLKERRDEEKKETKETKSKERQ 87
R +ER E +K+ + +ERQ
Sbjct: 425 ESERGRERGREREKQKGRERDRERQ 449
Score = 58.5 bits (140), Expect = 2e-09
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
R+R RER ++R RERER+R + +++ +R R R R R R R T
Sbjct: 173 RNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRER 232
Query: 65 SRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R ++ E +K+ + ++ ER+ TE D E + E +
Sbjct: 233 DRQRKTEREREKQAERERASERE-TERDKERERERD 267
Score = 58.2 bits (139), Expect = 3e-09
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 3 RSRSRSPRRERR--RSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST 60
R R +R+RR R R T R+RE R+RER R RER+R+R R R R R R R
Sbjct: 279 RERQTDRKRQRRTERDRETERKRE-RQRERERERERNRKRERERERERERERQRETERDR 337
Query: 61 SPSPSRLKERRDE-EKKETKETKSKERQITEEDLEGKTEEE 100
R ++R+ E +++ ++T + R+ E + E + E +
Sbjct: 338 EKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERD 378
Score = 57.8 bits (138), Expect = 4e-09
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 24/116 (20%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERD------------------RRRSRS 43
R R R RE+ R R T RER+R+R +ER+R +ER+ R R R
Sbjct: 93 RHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQ 152
Query: 44 RSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
R + R R R R +R KER E +K +E + +ERQ + E KTE+
Sbjct: 153 RDAEKERERQTDRERQRQTERNRQKER--EREKNRQERRERERQ---REKENKTED 203
Score = 57.8 bits (138), Expect = 4e-09
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-----------RRRERSRSRERDRRRSRSRSPHRRRS 51
R R + R++ R R T RE ER R R+R +ER+R+ R R R+
Sbjct: 115 RQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERN 174
Query: 52 RSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R R R + R +ER+ E++ +T++ S+ + E + E +TE E
Sbjct: 175 RQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETE 223
Score = 57.0 bits (136), Expect = 6e-09
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
R R+ RE R + RER+R R R +ER+R+ R R R R R R
Sbjct: 248 RERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRER 307
Query: 65 SRLKERRDEEKKETKETKSKERQ-ITEEDLEGKTEEE 100
R +ER + ++E + + +ERQ TE D E + E +
Sbjct: 308 ERERERNRKRERERERERERERQRETERDREKERERK 344
Score = 56.2 bits (134), Expect = 1e-08
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 5 RSRSPRRERRRSRSTSRERERRR-----------RERSRSRERDRRRSRSRSPHRR---R 50
R R RER+R R T +RER R RER R RERDR+ +R R R R
Sbjct: 335 RDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDR 394
Query: 51 SRSPRRHRSTSP--SPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
R R R T R E++ E +K+ + + +ER E +G+ +
Sbjct: 395 DRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERD 445
Score = 55.1 bits (131), Expect = 2e-08
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERS----RSRERDRRRSRSRSPHRRRSRSPRR 56
M R R+R RE RR RERER R +S RERDR R R + R+ +
Sbjct: 351 MDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDG 410
Query: 57 HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R T R K+R E +E + K++ E D E +T+ +
Sbjct: 411 QRETEKQREREKDRESERGRERGREREKQKG-RERDRERQTDRQ 453
Score = 54.3 bits (129), Expect = 4e-08
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R ER R R T +RER R+R+ + RER R R R R R + R ++
Sbjct: 127 RERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNR- 185
Query: 62 PSPSRLKERRDEEKKETKETKSKERQI---TEEDLEGKTEEEIE 102
+ERR+ E++ KE K+++R E + E +TE E E
Sbjct: 186 ------QERRERERQREKENKTEDRHSERGRERERERETETETE 223
Score = 54.3 bits (129), Expect = 4e-08
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDR-RRSRSRSPHRRRSRSPRRHRSTS 61
R R +R+ R+R RERE+ R+ER R RER R + +++ H R R R R T
Sbjct: 161 RQTDRERQRQTERNRQKEREREKNRQER-RERERQREKENKTEDRHSERGRERERERETE 219
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDL-EGKTEEEIE 102
R ++ E ++ K + +E+Q E E +TE + E
Sbjct: 220 TETERKRQTDRERDRQRKTEREREKQAERERASERETERDKE 261
Score = 54.3 bits (129), Expect = 4e-08
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-----RERSRSRERDRRRSRSRSPHRRRSRS---- 53
R R R E R R T RER+R+R RE+ RER R R R R R
Sbjct: 212 RERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRD 271
Query: 54 -PRRHRSTSPSPSRLKERRDEEKKETKETKSKERQ-ITEEDLEGKTEEEIE 102
RR + R ++RR E +ET+ + ++R+ E + K E E E
Sbjct: 272 RDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERE 322
Score = 50.4 bits (119), Expect = 6e-07
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERER---RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRS 59
R R RER R T ER+R R R+R R ER+R + R R + R
Sbjct: 204 RHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERE 263
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R ++RR +E++ + K + R + + E K E + E
Sbjct: 264 RERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRE 306
Score = 49.3 bits (116), Expect = 1e-06
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-----RRRERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
R R R ER R + R+R+R R R R RE R+ R R R R R R
Sbjct: 325 RERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSARE 384
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKG 117
R R ++R+ E +++T++ + +R+ TE+ E + + E E + G + KG
Sbjct: 385 RE-ERERDRDRDRQKERERQTEKDRDGQRE-TEKQREREKDRESERGRERG-REREKQKG 441
Query: 118 KKVDGSVNAYAINVSQKRKYRQYMN 142
++ D Q+++ Y+N
Sbjct: 442 RERDRERQTDRQAGRQRKRSTLYVN 466
Score = 43.9 bits (102), Expect = 6e-05
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 16/106 (15%)
Query: 8 SPRRERRRSRSTSRERERRRRERSRSRER-----------DRRRSRSRSPHRRRSRSPRR 56
SPRR + + R R R + RER DR+R R R R R R R
Sbjct: 36 SPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRD--R 93
Query: 57 HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
HR + +ER+ + +++ + K + RQ ++ E +TE E E
Sbjct: 94 HRERQRDREKERERQTDRERDRQREKERNRQ---KERERETEREGE 136
Score = 40.0 bits (92), Expect = 8e-04
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 3 RSRSRSPRRERRRSRSTS-RERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R S RRR + ++ + RER+R +ER+RRR + R T
Sbjct: 28 RRRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREK---------------RQTE 72
Query: 62 PSPSRLKERRDEEKKETKETKSKERQ-ITEEDLEGKTEEE 100
R +ERR E+ + K + +ERQ E++ E +T+ E
Sbjct: 73 RETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRE 112
Score = 29.3 bits (64), Expect = 1.4
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPR--RHRS 59
GR R + RER R R T R+ R+R+ + R +RS +R R R +S
Sbjct: 433 GREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWKS 492
Query: 60 TSPSPSRLKER 70
+ P R
Sbjct: 493 SPEDPKAASTR 503
Score = 28.5 bits (62), Expect = 2.4
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 28 RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQ 87
R R S+E RRR ++ R+R +ERR E+++ +ET K +
Sbjct: 28 RRRPGSQESPRRRGLGQAHKDADGDDRERNRQKE------RERRREKRQTERETDRKRER 81
Query: 88 ITEEDLEGKTEEEIEMMK 105
E+D K + E +
Sbjct: 82 RREKDRHRKRDRHRERQR 99
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 67.8 bits (164), Expect = 4e-12
Identities = 43/101 (42%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 3 RSRSRSPRRERRRSRSTSRERERR-RRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST- 60
R R R R R R+R RER+++ RER R RER R+R R R R R R R R
Sbjct: 102 RERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRW 161
Query: 61 SPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEI 101
+ R KER+ E KKE KE K +E++ ED + K E I
Sbjct: 162 AEREERKKERKKERKKERKEKKKEEKR--REDKKRKWGEGI 200
Score = 66.6 bits (161), Expect = 8e-12
Identities = 42/101 (41%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 5 RSRSPRRERRRSRSTSRERERRR-----RERSRSRERDRRRSRSRSPHRRRSRSPRRHRS 59
R R R+R R R T R RER R R++ RERDR R R R R R R R R
Sbjct: 94 RERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRE 153
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
T R ER +E KKE K+ + KER+ E+ E K E+
Sbjct: 154 TDRERQRWAER-EERKKERKKERKKERK--EKKKEEKRRED 191
Score = 66.2 bits (160), Expect = 1e-11
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
R R +R+R R R T RER++ R +R R RE DR R R+R R R + R R
Sbjct: 78 RQRERQRQRERKRQTDRERDKDR-DRERKRETDRNRERNRKGGRERDKQTERERDRERER 136
Query: 65 SRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMK 105
R +ER + ++E K +ERQ E E K E + E K
Sbjct: 137 QRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKK 177
Score = 60.1 bits (144), Expect = 8e-10
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R + R+R+R R ERE R R+R R RERDR+ R + R++ R +R R
Sbjct: 13 RGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERET 72
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
++R + ++E K +ER + D E K E +
Sbjct: 73 ERETERQRERQRQRERKRQTDRERD-KDRDRERKRETD 109
Score = 59.3 bits (142), Expect = 1e-09
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
+R R R R R R T RE+ER R ++ R R+R R R R R+R R +R R
Sbjct: 35 NRHRQRDRHRERDRQTDREKERER-QKERDRQRQRERETERETERQRERQRQRERKRQTD 93
Query: 64 PSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R K+R E K+ET + + R+ E + +TE E
Sbjct: 94 RERDKDRDRERKRETDRNRERNRKGGRE-RDKQTERE 129
Score = 58.5 bits (140), Expect = 2e-09
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR---RERSRSRERDRRRSRSRSPHRRRSRSPRRHRS 59
R R + R+R+R R T RE ER+R R+R R R+ DR R + R R+R R R+
Sbjct: 56 RERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERN 115
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMK 105
R K+ E +E + + +ER+ + E K E + E +
Sbjct: 116 RKGGRERDKQTERERDRERERQRQRERE-RQRQRERKRETDRERQR 160
Score = 50.1 bits (118), Expect = 8e-07
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 RERRRSRSTSRERERRRRERSRSRERDRR-----RSRSRSPHRRRSRSPRRHRSTSPSPS 65
R+R R R T R +E R ER R RER+ + R R R HR R R R +
Sbjct: 3 RQRERKRETDRGKETER-ERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKE 61
Query: 66 RLKERRDEEKKETKETKSKERQITEE 91
R ++R+ E + E + + +ERQ E
Sbjct: 62 RDRQRQRERETERETERQRERQRQRE 87
Score = 46.6 bits (109), Expect = 9e-06
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 21 RERERRR---RERSRSRERDRRRSRSRSPHR-RRSRSPRRHRSTSPSPSRLKERRDEEKK 76
R+RER+R R + RERDR+R R R R R RHR R KER E +K
Sbjct: 3 RQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKER--ERQK 60
Query: 77 ETKETKSKERQITEEDLEGKTEEE 100
E + +ER+ TE + E + E +
Sbjct: 61 ERDRQRQRERE-TERETERQRERQ 83
Score = 41.2 bits (95), Expect = 4e-04
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 28 RERSRSRERDRRRSRSRSPHRRRSR---SPRRHRSTSPSPSRLKERRDEEKKETKETKSK 84
R+R R RE DR + R R+R R + R +R R ++R+ + +KE + K +
Sbjct: 3 RQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKER 62
Query: 85 ERQ-ITEEDLEGKTEEEIEMMK 105
+RQ E + E +TE + E +
Sbjct: 63 DRQRQRERETERETERQRERQR 84
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 67.4 bits (163), Expect = 5e-12
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR-RSRSPRRHRSTS 61
RSRSRSPR+ R RSRS SR+R+ R+R RSRSRER R+ SRS S RR R R R +
Sbjct: 405 RSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGL 464
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE--EIEMMKLM 107
P ++ + T +++ T++DL EE +IE + ++
Sbjct: 465 PP---IRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMI 509
Score = 49.3 bits (116), Expect = 1e-06
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 11 RERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKER 70
R R R+ S SR R R+R RSRSR R+R HR+RSRS R R S S ER
Sbjct: 397 RSRSRTHSRSRSRSPRKR-RSRSRSGSRKRK-----HRKRSRSRSRERKRKSSRSYSSER 450
Query: 71 RDEEKKETKETK 82
R E+++ ++ K
Sbjct: 451 RAREREKERQKK 462
Score = 47.0 bits (110), Expect = 7e-06
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 32 RSRERDRRRSRSRSPHRRRSRS-----PRRHRSTSPSPSRLKERRDEEKKETKETKSKER 86
RSR R RSRSRSP +RRSRS R+HR S S SR E K+++ + S ER
Sbjct: 397 RSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSR------ERKRKSSRSYSSER 450
Query: 87 QITEEDLE 94
+ E + E
Sbjct: 451 RAREREKE 458
Score = 45.1 bits (105), Expect = 2e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 40 RSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
RSRSR+ R RSRSPR+ RS S S SR ++ R + ++E K K + + + E
Sbjct: 397 RSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRARERE 456
Query: 100 EIEMMK 105
+ K
Sbjct: 457 KERQKK 462
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 67.0 bits (162), Expect = 6e-12
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR---RERSRSRERDRRRSRSRSPHRRRSRSPRRHRS 59
R R R RER+R R+ R RE+ R ++R R R+RDR R R R R+R R R R
Sbjct: 58 RERERQRERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRE 117
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQI-TEEDLEGKTEEEIEMMKLMG 108
T +ER+ + K+E + ++R+I ++D E +TE++ + + MG
Sbjct: 118 TETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMG 167
Score = 52.4 bits (124), Expect = 2e-07
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
R R RER++ R T R+R+R R+ RERDR R + R R R R R R
Sbjct: 171 RYRDRERERQKQRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDR 230
Query: 65 SRLKER-RDEEK 75
R +E+ RD +K
Sbjct: 231 ERQREKDRDRQK 242
Score = 50.4 bits (119), Expect = 6e-07
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R R +R R T R+ ER R+R+R R ++R+R+R R + R + R
Sbjct: 104 RDRKRERWGDRDRETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDRE 163
Query: 62 PSPSRLKERRDEEK-----KETKETKSKERQITEEDLEGKTEEEIEMMK 105
+ RD E+ +ET+ + +ERQ +ED E + + E K
Sbjct: 164 REMGETERYRDRERERQKQRETRRDRDRERQREKEDRERDRDRQKEREK 212
Score = 49.7 bits (117), Expect = 1e-06
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R R +RE RR R R+RE+ RER R R+++R + R R R R R R
Sbjct: 175 RERERQKQRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDRERQR 234
Query: 63 SPSRLKER 70
R +++
Sbjct: 235 EKDRDRQK 242
Score = 48.9 bits (115), Expect = 2e-06
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 3 RSRSRSPRRERRRSRS----------TSRERERRRRERSRSRERDRRRSRSRSPHRRRSR 52
R R R RER+R R T ++R+R R R RDR R R + RR R
Sbjct: 130 RDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERERQKQRETRRDR 189
Query: 53 SPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMK 105
R R +++ EK +E ++ + E D E + E++ + K
Sbjct: 190 DRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDRERQREKDRDRQK 242
Score = 48.1 bits (113), Expect = 3e-06
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R R R+++R R+RER+R + R R+RDR++ R + +R R
Sbjct: 171 RYRDRERERQKQRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETG--------- 221
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEEDLEGKTE 98
++R E +E + K ++RQ + + G+ E
Sbjct: 222 -----RDRDKERDRERQREKDRDRQKAIDCVPGRWE 252
Score = 46.6 bits (109), Expect = 9e-06
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERER---RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRS 59
R + R ++R R R RER+R R R+R R +RDR R R R R +R +
Sbjct: 78 REKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRETETERQEERERQRDRKREKD 137
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R + + ET++ + +ER++ E + E E
Sbjct: 138 RERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERE 178
Score = 34.7 bits (78), Expect = 0.034
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 3 RSRSRSPR-RERRRSRSTSRERERRR-----RERSRSRERDRRRSRSRSPHRRRSRSPRR 56
R R R RER R R RE++R R R+R + R+R+R+R + R + P R
Sbjct: 191 RERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDRERQREKDRDRQKAIDCVPGR 250
Query: 57 HRST 60
T
Sbjct: 251 WEVT 254
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 65.5 bits (158), Expect = 2e-11
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERER---RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRS 59
R R R RRER R R RERE+ R RER R R+RDR + R R R R R R RS
Sbjct: 316 RERERE-RREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERS 374
Query: 60 TSPSPSRLKER---RDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
+ + R + R RD E++ +E + + + E + E + E E E
Sbjct: 375 SDRNKDRSRSREKSRDRERERERERERERERERERERERERERERE 420
Score = 65.5 bits (158), Expect = 2e-11
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-----RRRERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
R R R +ER R R R+R+R R R+R R R+RDR RS R+ R RSR R
Sbjct: 331 REREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRD 390
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEE-------DLEGKTEEEIEMMKL 106
R R +ER E ++E + + +ER+ E D E E+ E KL
Sbjct: 391 REREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKL 446
Score = 64.3 bits (155), Expect = 4e-11
Identities = 43/105 (40%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 3 RSRSRSPRRER-RRSRSTSRERERRR---RERSRSRERDRRRSRSRSPHRRRSRSPRRHR 58
R R R RER RR R RERER R +ER R RERDR R R++ R R R R R
Sbjct: 310 RERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDR 369
Query: 59 STSPSPSRLKER-RDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
S R K+R R EK +E + + + E + E + E E E
Sbjct: 370 DRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERE 414
Score = 63.5 bits (153), Expect = 7e-11
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
+ + R + RR R RERER RRER R RER+R R + + R R R R R+
Sbjct: 298 KEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKER 357
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEE---DLEGKTEEEIE 102
R +ER + +E ++K+R + E D E + E E E
Sbjct: 358 DRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERE 400
Score = 63.2 bits (152), Expect = 9e-11
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R R R+R R RS+ R ++R R RE+SR RER+R R R R R R R R R
Sbjct: 359 RDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERE 418
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMK 105
R +E+ + +E E + ER+ E L K E +K
Sbjct: 419 REREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLK 462
Score = 62.8 bits (151), Expect = 1e-10
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R++ RS RE+ R R RERER R RER R RER+R R R R R R + +R R
Sbjct: 377 RNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDREED 436
Query: 62 PSPS---RLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
+ R ER+ EK+ + + K +I E + E+E E
Sbjct: 437 EEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAE 480
Score = 59.7 bits (143), Expect = 1e-09
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R +SR RER R R RERER R RER R RER+R R R + R R
Sbjct: 385 REKSRDREREREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERR 444
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEE-DLEGKTEEE 100
+L+E+ ++ K + +ER+ T E + E + EEE
Sbjct: 445 KLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEE 484
Score = 56.6 bits (135), Expect = 8e-09
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-RRRERSRSRERDRRRSR---SRSPHRRRSRSPRRHR 58
R R R RER R R RERER R RER R RE+D++R R + RR +
Sbjct: 393 REREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLRE 452
Query: 59 STSPSPSRLKERRDEEKKETKE-TKSKERQITEEDLEGKTEEEIEMMK 105
+ RLK E+K+T+E K ER EE+ + +E + +K
Sbjct: 453 KEAAYQERLKNWEIRERKKTREYEKEAER---EEERRREMAKEAKRLK 497
Score = 40.4 bits (93), Expect = 6e-04
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST 60
+ + R + E + + +E + R R RER+R R R R R R R R
Sbjct: 281 ISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERER-----RERERERERERER 335
Query: 61 SPSPSRLKER-RDEEKKETKE 80
R +ER RD ++ TKE
Sbjct: 336 EKEKERERERERDRDRDRTKE 356
Score = 36.6 bits (83), Expect = 0.009
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 11 RERRRSRSTSR--ERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLK 68
RE + R T + E E+ ++E+ R RR R R R R R R +
Sbjct: 279 REISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERER-------------RER 325
Query: 69 ERRDEEKKETKETKSKERQITEEDLEGKTEE 99
ER E ++E ++ K +ER+ + +T+E
Sbjct: 326 EREREREREREKEKERERERERDRDRDRTKE 356
Score = 36.6 bits (83), Expect = 0.009
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 18 STSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKE 77
S ++R R R + + ERDR+R + R+ H P P +R ++E +
Sbjct: 516 SALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGH----PDPDAELQRMEQEAER 571
Query: 78 TKETKSKERQITEEDLEGKTEEE 100
++ + K+ +EE+ E K E+E
Sbjct: 572 RRQPQIKQEPESEEEEEEKQEKE 594
>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
Length = 221
Score = 65.5 bits (158), Expect = 2e-11
Identities = 45/90 (50%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 5 RSRSPRRERR-RSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
RSRSPRR RR RSRS SR R R R SRS+ R R RSRSRS +SRS RR +S S S
Sbjct: 118 RSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS--TSKSRSARRSKSKSSS 175
Query: 64 PSRLKER-------RDEEKKETKETKSKER 86
SR + R R +E+KS+ R
Sbjct: 176 VSRSRSRSRSRSRSRSPPPVSKRESKSRSR 205
Score = 59.3 bits (142), Expect = 1e-09
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 3 RSRSRSPRRERRRSRST-SRERER---RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHR 58
RSRSRS R R RSRS SR + R R R RS S+ R RRS+S+S RSRS R R
Sbjct: 127 RSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSR 186
Query: 59 STSPSPSRLKERRDEEKKETKE-TKSKERQ 87
S S SP + +R + + +K KS E +
Sbjct: 187 SRSRSPPPVSKRESKSRSRSKSPPKSPEEE 216
Score = 54.7 bits (130), Expect = 3e-08
Identities = 36/84 (42%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPH-RRRSRSPRRHRSTSP 62
SR P R R R RRR RSRSR R R RSRSRS + R +SRS R RS S
Sbjct: 101 SRRGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRST 160
Query: 63 SPSRLKERRDEEKKETKETKSKER 86
S SR R + ++S+ R
Sbjct: 161 SKSRSARRSKSKSSSVSRSRSRSR 184
Score = 51.2 bits (121), Expect = 3e-07
Identities = 34/74 (45%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 14 RRSRSTSRERERRRRERSRSRERDRRR-SRSRSPHRRRSRSPRRHRSTSPSPSRLKERRD 72
RRSRS R R R R RSRSR R R R SRS+S R RSRS R S S S R K +
Sbjct: 117 RRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRS--RSTSKSRSARRSKSKSS 174
Query: 73 EEKKETKETKSKER 86
+ ++S+ R
Sbjct: 175 SVSRSRSRSRSRSR 188
Score = 33.1 bits (74), Expect = 0.098
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 4 SRSRSPRRERRRSRSTSRER--ERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
S+SRS RR + +S S SR R R R +R S+SRS + +SP + S
Sbjct: 161 SKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEEEGAVS 220
Score = 32.7 bits (73), Expect = 0.13
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 23 RERRRRERSRSRERDRRRSRSRSPHRR--------RSRSP-RRHRSTSPSPSRLKER--- 70
RE R + R D SR P RR RSRSP RR RS S S SR + R
Sbjct: 83 RELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRS 142
Query: 71 RDEEKKETKETKSKERQITE 90
R K T+S+ R ++
Sbjct: 143 RYSRSKSRSRTRSRSRSTSK 162
Score = 30.4 bits (67), Expect = 0.64
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRS 33
+ RSRSRS R R RS +RE + R RS+S
Sbjct: 176 VSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKS 208
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 65.1 bits (157), Expect = 2e-11
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-----RERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
R R R E+ R R T RER+R+R R+R RE +R R R R R R R
Sbjct: 187 RDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERD 246
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEI 101
R R KER+ E KKE KE K +E++ ED + K E I
Sbjct: 247 RERDRKEERKKERKKERKKERKEKKKEEKR--REDKKRKWGEGI 288
Score = 59.3 bits (142), Expect = 1e-09
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 3 RSRSRSPRRERRRS-RSTSRERER-------RRRERSRSRERDRRRSRSRSPHRRRSRSP 54
R R R RERRR + T+R R+R R RER + + R+R R R R R R R
Sbjct: 92 RDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREK 151
Query: 55 RRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R R T +E E +++ + K KER+ TE D + + + E E
Sbjct: 152 ERERQTEKDRDGQRETETERERDREREKQKERE-TERDRDRQRDTEKE 198
Score = 56.6 bits (135), Expect = 8e-09
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-RRRERSRSRERDR--------RRSRSRSPHRRRSRS 53
R R + RER R R RER+R R +ER R E+DR R R R +++ R
Sbjct: 125 REREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERE 184
Query: 54 PRRHRSTSPSPSRLKERR-DEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASF 112
R R + +ER+ D E+ ++T+++ ++ T+ + E +T+ E +
Sbjct: 185 TERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQR------- 237
Query: 113 DSTKGKKVDGSVNAYAINVSQKRKYRQ 139
D +GK+ D + +++K R+
Sbjct: 238 DRDRGKERDRERDRKEERKKERKKERK 264
Score = 56.2 bits (134), Expect = 1e-08
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPR----- 55
+G++ + +R+R R RE+ + R+R R R+R+RRR + + +R R R +
Sbjct: 65 LGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRR-KEKETNRNRDREKQTEIER 123
Query: 56 -RHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R R R ++R E +++ K +ERQ TE+D +G+ E E E
Sbjct: 124 DREREKQKGRERERDRGRERERDRDREKERERQ-TEKDRDGQRETETE 170
Score = 55.5 bits (132), Expect = 2e-08
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R + ER R R + RER R +R R RERDR R + R + R + R T
Sbjct: 113 RDREKQTEIERDREREKQKGRERER-DRGRERERDRDREKERERQTEKDRDGQ--RETET 169
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R +ER ++++ET+ + ++R TE++ E +T+ E
Sbjct: 170 ERERDREREKQKERETERDRDRQRD-TEKERERQTDRE 206
Score = 54.7 bits (130), Expect = 3e-08
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRR-----RERSRSRERDRRRSRSRSPHRRRSRSPRR 56
GR R R RE+ R R T ++R+ +R RER R RE+ + R R R+R R
Sbjct: 140 GRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKER 199
Query: 57 HRSTSPSPSRLKERRDEEKKETK---ETKSKERQITEEDLEGKTEEEIE 102
R T R ++ + E ++ET E ++ R+ + D + E + E
Sbjct: 200 ERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRE 248
Score = 54.3 bits (129), Expect = 4e-08
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-------RERSRSRERDRRRSRSRSPHRRRSRSPR 55
R + + R R R + T ER+R R RER R RER+R R R + R+ +
Sbjct: 103 RRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRD 162
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKERQITEE---------DLEGKTEEE 100
R T R +ER ++++ET+ + ++R +E D + KT+ E
Sbjct: 163 GQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTE 216
Score = 53.9 bits (128), Expect = 5e-08
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 5 RSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
R RER R R +ERE R R+R R E++R R R R+R R R T
Sbjct: 165 RETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDRE 224
Query: 64 PSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMK 105
R +RR E +++ K ++R+ ++ E K E + E K
Sbjct: 225 GERETDRRRERQRDRDRGKERDRERDRKE-ERKKERKKERKK 265
Score = 52.4 bits (124), Expect = 2e-07
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 11 RERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKER 70
+ER R R RER R+ +E +R+R+R+++ R R + + R R R ++R
Sbjct: 90 KERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDR 149
Query: 71 RDEEKKETKETKSKERQITEEDLEGKTEEE 100
E +++T++ + +R+ TE + E E E
Sbjct: 150 EKERERQTEKDRDGQRE-TETERERDRERE 178
Score = 30.0 bits (66), Expect = 0.83
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSR 42
G+ R R R+ R + +ER++ R+E+ + +R + R
Sbjct: 242 GKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKR 282
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 64.7 bits (156), Expect = 3e-11
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 3 RSRSRSPRRER--------------RRSRSTSRERERRRRERSRSRERDRRRSRSRSPHR 48
RSRSRSP +ER RRSRS S+ER+ R+ RS S+ERD RRSRS S R
Sbjct: 473 RSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQ-SRSSSKERDHRRSRSPSKER 531
Query: 49 RR--SRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKER 86
+R SRSP + R S S S +ER + + + + + R
Sbjct: 532 QRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRR 571
Score = 63.9 bits (154), Expect = 5e-11
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHR--RRSRSP--RRHR 58
+SRS S R+ RRSRS S+ER+RR+ RS ++ERDR +SRS S R R+SRSP R R
Sbjct: 511 QSRSSSKERDHRRSRSPSKERQRRQ-SRSPNKERDRSQSRSPSEEREHRQSRSPSKERDR 569
Query: 59 STSPSPSRLKERRDEEKKETKETKSKER 86
SPS+ +ERR + S+ R
Sbjct: 570 RRWRSPSKERERRQSRSSSEERDHSRSR 597
Score = 62.4 bits (150), Expect = 2e-10
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 9/94 (9%)
Query: 5 RSRSPRRER--RRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRS--RSP---RRH 57
RSRSP +ER R+SRS+S+ER+ RR RS S+ER RR+SRS + R RS RSP R H
Sbjct: 499 RSRSPSKERQCRQSRSSSKERDHRR-SRSPSKERQRRQSRSPNKERDRSQSRSPSEEREH 557
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEE 91
R S SPS+ ++RR + + + R +EE
Sbjct: 558 RQ-SRSPSKERDRRRWRSPSKERERRQSRSSSEE 590
Score = 62.0 bits (149), Expect = 2e-10
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRER-SRSRERDRRRSRSRSPHRR----RSRSPRRHR 58
SRSRSP + R RSRS S +ER + S S+ERD RRSRS S R+ RS S R
Sbjct: 462 SRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDH 521
Query: 59 STSPSPSRLKERRDEEKKETKETKSKERQITEE 91
S SPS+ ++RR + +S+ R +EE
Sbjct: 522 RRSRSPSKERQRRQSRSPNKERDRSQSRSPSEE 554
Score = 58.5 bits (140), Expect = 2e-09
Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-----------RRRERSRSRERDRRRSRSRSPHRRRS 51
RSRSRSP + R RSRS S + R R R RSRS + R SRSRSP++ R
Sbjct: 413 RSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARD 472
Query: 52 RSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
RS R S S+L E + SKERQ + K +
Sbjct: 473 RSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERD 520
Score = 57.8 bits (138), Expect = 4e-09
Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 RSRSRSP--RRERRRSRSTSRERERRR---------RERSRSRERDRRRSRSRSPHRRRS 51
RS+SRSP RE R+SRS S+ER+RRR R +SRS +R SRSRSP+++
Sbjct: 545 RSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSG 604
Query: 52 RSPRRHRSTSPSPSRLKERRDEEKKETKETKSKE 85
S R S + SR + E T SKE
Sbjct: 605 YSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKE 638
Score = 57.4 bits (137), Expect = 5e-09
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHR----RRSRSP--R 55
GRS+S SP ++R SRS S + R R RSRS + R RSRSRSP++ RSRSP
Sbjct: 388 GRSQSGSPNKQRDHSRSRSPNKARDR-SRSRSPYKARDRSRSRSPNKARDCSRSRSPYKA 446
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKERQITEE 91
R RS S SP++ ++ +S+ R ++E
Sbjct: 447 RDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKE 482
Score = 56.6 bits (135), Expect = 8e-09
Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRE-RSRSRERDRRRSRSRSPHR--RRSRSPRRHRS 59
R +SRSP +ER RS+S S ER R+ RS S+ERDRRR RS S R R+SRS R
Sbjct: 533 RRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERD 592
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQIT 89
S S S K+ + + + K+ R T
Sbjct: 593 HSRSRSPNKQSGYSRPRASSKEKAHSRSRT 622
Score = 55.8 bits (133), Expect = 1e-08
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHR--RRSRSPRRHRST 60
RSRS S R+RR+SRS ++ER+R + RS S ER+ R+SRS S R RR RSP + R
Sbjct: 523 RSRSPSKERQRRQSRSPNKERDRSQ-SRSPSEEREHRQSRSPSKERDRRRWRSPSKERER 581
Query: 61 SPSPSRLKERRDEEKKETKETKS 83
S S E RD + + +S
Sbjct: 582 RQSRSS-SEERDHSRSRSPNKQS 603
Score = 52.0 bits (123), Expect = 2e-07
Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 6 SRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPH----RRRSRSPRRHRSTS 61
S SPR+E RS+S S ++R RSRS + R RSRSRSP+ R RSRSP + R S
Sbjct: 380 SSSPRKESGRSQSGSPNKQRDH-SRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCS 438
Query: 62 PSPSRLKERRDEEKKETKETKSKER 86
S S K R + + + R
Sbjct: 439 RSRSPYKARDRSRSRSPNKARDHSR 463
Score = 46.2 bits (108), Expect = 1e-05
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 19/98 (19%)
Query: 4 SRSRSPRRERRRSRSTSRERERR---RRERSRSRERDRR------------RSRSRSPHR 48
S+SRSPRR R S+ + R R +R SR+R R R+ RS S+ +
Sbjct: 282 SQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQ 341
Query: 49 RRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKER 86
+SR+PRR RS + S + KER + + SKER
Sbjct: 342 NQSRTPRRGRSHNWSRNPSKERSHSHSR----SSSKER 375
Score = 46.2 bits (108), Expect = 1e-05
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-----------RERSRSRERDRRRSRSRSPHRRRS 51
R RS S RERR+SRS+S ER+ R R R+ S+E+ RSR+ S S
Sbjct: 571 RWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHS 630
Query: 52 RSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQ 87
+S + + PS S + D ++ T+ + + +
Sbjct: 631 QSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNR 666
Score = 45.4 bits (106), Expect = 2e-05
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 2 GRSR--SRSPRRERRRS--RSTSRERERR-----RRERSRS------RERDRRRSRS--R 44
GRS SR+P +ER S RS+S+ER+ R R+E RS ++RD RSRS +
Sbjct: 350 GRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNK 409
Query: 45 SPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKER 86
+ R RSRSP + R S S S K R + + + + R
Sbjct: 410 ARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSR 451
Score = 40.4 bits (93), Expect = 6e-04
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MGR---SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHR--RRSRSPR 55
MGR SRS S + + +SR+ R R R+ S+ER SRS S R R S SPR
Sbjct: 326 MGRHSQSRSHSKGKSQNQSRTPRRGRSHNW-SRNPSKERSHSHSRSSSKERDHRGSSSPR 384
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKER 86
+ S S S K+R + + + + R
Sbjct: 385 KESGRSQSGSPNKQRDHSRSRSPNKARDRSR 415
Score = 40.4 bits (93), Expect = 6e-04
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRS------PR 55
+++SR+PRR R + S + +ER RS S+ERD R S S P + RS +
Sbjct: 341 QNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSS--PRKESGRSQSGSPNKQ 398
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKER 86
R S S SP++ ++R +S+ R
Sbjct: 399 RDHSRSRSPNKARDRSRSRSPYKARDRSRSR 429
Score = 40.0 bits (92), Expect = 8e-04
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
RSR RS R R + +R + + R +R SR R+P RR SRS +R S +
Sbjct: 81 RSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSRGRTPGRRGSRSSKRSPSRAS 140
Query: 63 SPSRLK 68
+P R++
Sbjct: 141 TPGRIR 146
Score = 37.0 bits (84), Expect = 0.007
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
SRSR+P +E S+S + +E + + R D +RS +R+ ++R+P + S SPS
Sbjct: 618 SRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSKTSSHSPS 677
Score = 33.5 bits (75), Expect = 0.075
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRER------ERRRRERSRSRERDRRRSRSRSPHRRRSRSPRR 56
RS++R+P R +R++ + +RR SR R RR SRS R+ +P R
Sbjct: 85 RSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSRGRTPGRRGSRSSKRSPSRASTPGR 144
Query: 57 HRSTSPSP---SRLKERRDEEKKETKETKSKERQITEE 91
R+ P SR++ ++K ++ + R E
Sbjct: 145 IRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSNRE 182
Score = 33.5 bits (75), Expect = 0.075
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 20 SRERERRRRERS-RSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKET 78
SRE+ E S R + ++ +RSR +SRSPRR RS S + + R K+
Sbjct: 252 SREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNH 311
Query: 79 KETKSKERQ 87
+S+ R+
Sbjct: 312 SRARSRTRK 320
Score = 28.9 bits (63), Expect = 1.9
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSR-SRSPHRRRSRSPRRHRSTS 61
R R+ S + RSR+ S+E + R+ S+E D +S RSP +RS + S +
Sbjct: 607 RPRASSKEKAHSRSRTPSKE-GNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQN 665
Query: 62 PSPSR 66
+PS+
Sbjct: 666 RTPSK 670
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 64.7 bits (156), Expect = 3e-11
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 28/128 (21%)
Query: 1 MGRSRSRSPRR-----------ERRRSRSTSRERER-RRRERSRSRERDRR---RSRSRS 45
MGRSRSRS R +R RSRS SR++ER R+R +SR +R+RR RSRSRS
Sbjct: 1 MGRSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRSRS 60
Query: 46 PHRRRSRSPR-RHRSTSP------------SPSRLKERRDEEKKETKETKSKERQITEED 92
+ SR R R R++SP S L E++ E++E K ++R+I +++
Sbjct: 61 TNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQE 120
Query: 93 LEGKTEEE 100
+E K EE
Sbjct: 121 IEEKLIEE 128
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 64.3 bits (155), Expect = 4e-11
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRR-ERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R R RER R R RERE+ R ER R+RER+R R + R R R R R R
Sbjct: 681 RERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERE 740
Query: 62 PSPSRLKER-RDEEKKETKETKSKERQITEE 91
R KER R+ E++E + + +ER+ E
Sbjct: 741 RERDREKEREREREERERERERERERERERE 771
Score = 63.2 bits (152), Expect = 9e-11
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 11 RERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKE 69
RER R R RERER R RER R RE++R R R+ R R R R R +E
Sbjct: 677 RERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRE 736
Query: 70 RRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R E +++ ++ + +ER+ E + E + E E E
Sbjct: 737 RERERERDREKEREREREERERERERERERERE 769
Score = 62.4 bits (150), Expect = 2e-10
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R+ R+R R R RERER R R+R R +ER+ R R+R R R + R R
Sbjct: 671 RRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRD 730
Query: 62 PSPSRLKER---RDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R +ER RD EK+ +E + +ER+ E + E + E E E
Sbjct: 731 RDHDRERERERERDREKEREREREERERE-RERERERERERERE 773
Score = 62.4 bits (150), Expect = 2e-10
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-------RRRERSRSRERDRRRSRSRSPHRRRSRSPR 55
R R R RER R R RE+ER R RER R +ERDR R R R R R R
Sbjct: 683 RERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERE 742
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKERQ---ITEEDLEGKTEEEIE 102
R R R +ER E ++E + + +ER+ E D E + + + E
Sbjct: 743 RDREKERERER-EERERERERERERERERERERERARERDKERERQRDWE 791
Score = 61.2 bits (147), Expect = 3e-10
Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R R R+R RERER R RER R RERDR R + R R R+R R R
Sbjct: 663 RRVDRVDDRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKE 722
Query: 62 PSPSRLKERRD--EEKKETKETKSKERQITEEDLEGKTEEEIE 102
R ++R E ++E + + KER+ E+ E + E E E
Sbjct: 723 RDRERDRDRDHDRERERERERDREKEREREREERERERERERE 765
Score = 60.5 bits (145), Expect = 6e-10
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R R R R R R+RER R RER R RER++ R R R R R + R
Sbjct: 667 RVDDRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRE 726
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R +R E ++E K +ER+ E + E + E E E
Sbjct: 727 RDRDRDHDRERERERERDREKEREREREERERERERERERE 767
Score = 59.3 bits (142), Expect = 1e-09
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R RER R R +ERER R ER R RER+R R R R R R+R + R
Sbjct: 729 RDRDHDRERERERERDREKEREREREERERERERERERERERERERERARERDKERE--- 785
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEED 92
++R E+K + ++ + ++R+ ED
Sbjct: 786 -----RQRDWEDKDKGRDDRREKREEIRED 810
Score = 58.9 bits (141), Expect = 2e-09
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 7 RSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSR 66
R RRE RR R+ R RER R RERDR R R R R R R R + R
Sbjct: 656 RDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERELERERARER 715
Query: 67 LKER---RDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
+ER RD E+ ++ + + E D E + E E E
Sbjct: 716 EREREKERDRERDRDRDHDRERERERERDREKERERERE 754
Score = 58.2 bits (139), Expect = 3e-09
Identities = 37/95 (38%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
R R RER R + RERE R RER R RER+R R R R R R + R R
Sbjct: 735 RERERERERDREKEREREREERERERERERERERERERERERARERDKERERQRDWEDKD 794
Query: 65 SRLKERRD--EEKKETK-------ETKSKERQITE 90
+RR+ EE +E + E KSK+R E
Sbjct: 795 KGRDDRREKREEIREDRNPRDGHDERKSKKRYRNE 829
Score = 57.8 bits (138), Expect = 4e-09
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R RER R R R+RE R R+R RER+R R R R R R R R R
Sbjct: 705 RELERERAREREREREKERDRE-RDRDRDHDRERERERERDREKERERERE-ERERERER 762
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R +ER E ++ + K +ERQ ED + ++ E
Sbjct: 763 ERERERERERERERARERDKERERQRDWEDKDKGRDDRRE 802
Score = 56.6 bits (135), Expect = 8e-09
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 5 RSRSPRRERRRSRSTSRERERRR---RERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
R R+ RER R + RER+R R RER R RERDR + R R R R R R
Sbjct: 709 RERAREREREREKERDRERDRDRDHDRERERERERDREKERERE-REERERERERERERE 767
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEI 101
R +ER E KE + + E + D + EEI
Sbjct: 768 RERERERERARERDKERERQRDWEDKDKGRDDRREKREEI 807
Score = 56.2 bits (134), Expect = 1e-08
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERER---RRRERSRSRERDRRRSRSRSP-HRRRSRSPRRHR 58
R R+R RER + R R+R+R R RER R R+R++ R R R R R R R R
Sbjct: 709 RERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERERERER 768
Query: 59 STSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
R +E RD+E++ ++ + K++ +D K EE
Sbjct: 769 ERERERERARE-RDKERERQRDWEDKDK--GRDDRREKREE 806
Score = 53.5 bits (127), Expect = 7e-08
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 10 RRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKE 69
R ERR R R +RR ER+R R+R+R R R R R R R R + R +E
Sbjct: 656 RDERREERRVDRVDDRRD-ERARERDRERERDRERERERERERDREREKERELERERARE 714
Query: 70 RRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMK 105
R E +KE + ++R + D E + E E + K
Sbjct: 715 REREREKERDRERDRDR---DHDRERERERERDREK 747
Score = 49.7 bits (117), Expect = 1e-06
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 5 RSRSPRRERR-RSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
R R P R+ R ++R +S ER R+R +RERD+R S R R R
Sbjct: 605 RDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERR 664
Query: 64 PSRLKERRDEEKKETKETKSKERQ-----ITEEDLEGKTEEEIE 102
R+ +RRDE +E + ++R+ E D E + E E+E
Sbjct: 665 VDRVDDRRDERARERDRERERDRERERERERERDREREKERELE 708
Score = 47.0 bits (110), Expect = 7e-06
Identities = 44/137 (32%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 4 SRSRSPRRERRRSRSTSRERERR---RRE----------RSRSRERDRRRSRSRSPHRRR 50
SR R R+R RERERR +RE R+R R+R R R R R +RR
Sbjct: 1295 SRDRLQERDRYE-HDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRR 1353
Query: 51 SRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFA 110
R R S S R ++R + E+ + +S +R E LEG+ E ++E A
Sbjct: 1354 DLDRERERLISDSVERDRDRDRDRTFESSQIESVKR--CEAKLEGEHERDLESTSRDSLA 1411
Query: 111 SFDSTKGKKVDGSVNAY 127
D + K GSV +
Sbjct: 1412 -LDKERMDKDLGSVQGF 1427
Score = 45.4 bits (106), Expect = 2e-05
Identities = 36/100 (36%), Positives = 41/100 (41%), Gaps = 24/100 (24%)
Query: 3 RSRSRSPR---RERRRSRSTSRERERRR-RERSRSRER------------DRRRSRS--- 43
R R R R RER R R RERER R RER + RER DRR R
Sbjct: 749 REREREERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIR 808
Query: 44 -----RSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKET 78
R H R R SPSP + +RR E ++
Sbjct: 809 EDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDS 848
Score = 44.7 bits (104), Expect = 3e-05
Identities = 38/127 (29%), Positives = 49/127 (38%), Gaps = 29/127 (22%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-----------RRRERSRSRE-------RDRRRSRSR 44
R R R RER R R RER+R RR +R RE D R+S+ R
Sbjct: 766 RERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKKR 825
Query: 45 -----------SPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDL 93
SP RRR SP S K R + +E++S ED
Sbjct: 826 YRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHLTEDR 885
Query: 94 EGKTEEE 100
+G+ +EE
Sbjct: 886 QGRWKEE 892
Score = 43.5 bits (101), Expect = 7e-05
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
G +S +R R + R+ +RRRE S + HR S+ R S S
Sbjct: 816 GHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQESRS 875
Query: 62 PSPSRLKERRD---EEKKETKETKSKERQITEEDLEGK 96
SPS L E R +E+ E K R+ E++L+ K
Sbjct: 876 LSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEK 913
Score = 40.0 bits (92), Expect = 8e-04
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 7 RSPR--RERRRSRSTSRERERRRRERSRSRE-RDRRRSRSRSPHRRRSRSPRRHRSTSPS 63
R PR R+RR +R T R RRE SR+ RD R R S + SR PR RST
Sbjct: 450 REPRDGRDRRDARDT-----RDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRST--- 501
Query: 64 PSRLKERRDEEKKETKETKSKERQITEE 91
++ D +E ++T KE EE
Sbjct: 502 ----RDAHDYRDREGRDTHRKEDTYPEE 525
Score = 40.0 bits (92), Expect = 8e-04
Identities = 38/127 (29%), Positives = 52/127 (40%), Gaps = 12/127 (9%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRS-RSPHRRRSRSPR---RHRS 59
+R RRE R SR RE R R RD R SRS R H R R R R
Sbjct: 461 ARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHRKED 520
Query: 60 TSPSPSRLKERRD--EEKKETK---ETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDS 114
T P SR R EE T+ E++++ R D G++ + + G
Sbjct: 521 TYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSR---G 577
Query: 115 TKGKKVD 121
++G ++D
Sbjct: 578 SRGSQID 584
Score = 39.7 bits (91), Expect = 0.001
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Query: 5 RSRSPRRERRRS----RSTSRERERRRRERS---RSRERDRRRSRSRSPHRRRSRSPRRH 57
R RSP RE+ R S S +R RRE + R RE+D R R + SR R
Sbjct: 390 RHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDD 449
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
R R R +++E ++++ D T+E
Sbjct: 450 REPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKE 491
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 2 GRSR---SRSPRRERRRSRSTSRERERR-----RRERSRSRERDRRRSRSRSPHRRRSRS 53
GR R S S RE+ +S + ER+ R R E SRS DR+ SRS S R S
Sbjct: 1223 GRKRVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPES 1282
Query: 54 PRRHRSTS---PSPSRLKER-----RDEEKKETKETKSKE 85
R+ S S S RL+ER E ++E ++T+ +E
Sbjct: 1283 DRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQRE 1322
Score = 39.3 bits (90), Expect = 0.001
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 4 SRSRSPRRERR-RSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRR--SRSPRRHRST 60
SR SP +R+ SRS S + R +ER R E DR R R R R+R R +
Sbjct: 1275 SRRSSPESDRQVHSRSGSFDSRDRLQERDRY-EHDRERERERRDTRQREWDRDADKDWPR 1333
Query: 61 SPSPSRLKERRDEEKKETKETKSKERQ 87
+ RL+ER E +++ + +ER+
Sbjct: 1334 NRDRDRLRERERERERDKRRDLDRERE 1360
Score = 39.3 bits (90), Expect = 0.001
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERERR-----RRERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
R R R RER + R RERER R+R R R+R S+ S R ++ H
Sbjct: 1339 RLRERERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEH 1398
Query: 58 RSTSPSPSR-----LKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
S SR KER D++ + + + E LE +E
Sbjct: 1399 ERDLESTSRDSLALDKERMDKDLGSVQGFEETNKSERTESLEAGDDE 1445
Score = 37.4 bits (85), Expect = 0.005
Identities = 35/106 (33%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDR----RRSRSRSPHR-----RRSRSP 54
SR S + S RR+R S S +R RRS S P +R +SP
Sbjct: 329 SRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSP 388
Query: 55 RRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
RHR SP R K R D E+ + ER+ ED GK + E
Sbjct: 389 PRHR----SPMREKGRHDHERTSQSHDRRHERR---EDTRGKRDRE 427
Score = 37.0 bits (84), Expect = 0.007
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
G+ S + RR R RER + +R+ + + R S SP R+ S S RHR
Sbjct: 67 GKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRNTEESSSPVRKES-SRGRHR--- 122
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
EK++ K TK + + EE++E +T +
Sbjct: 123 ------------EKEDIKITKERTPESEEENVEWETNRD 149
Score = 36.2 bits (82), Expect = 0.012
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHR--RRSRSPRRHRSTS 61
S+S R ERR R+RE+ RE R E+D+ SR HR R R R R
Sbjct: 407 SQSHDRRHERREDTRGKRDREKDSRE-EREYEQDQSSSRD---HRDDREPRDGRDRRDAR 462
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITE 90
+ R + R + ++++E + R E
Sbjct: 463 DTRDRRELRDSRDMRDSREMRDYSRDTKE 491
Score = 35.0 bits (79), Expect = 0.026
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 6 SRSPRRERRRSRSTSRERERRRRERSRSRERDRRRS---RSRSPHRRRSRSPRRHRSTSP 62
S SPRR+R S S R R RS S S R +SP R RS + R
Sbjct: 346 SPSPRRKRTPSPSYQRTLTPPLR-RSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDHE 404
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEE 91
S+ +RR E +++T+ + +E+ EE
Sbjct: 405 RTSQSHDRRHERREDTRGKRDREKDSREE 433
Score = 34.3 bits (77), Expect = 0.044
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 15 RSRSTSRERERRRRERSRSRE-RDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDE 73
R +R+ + R R+ R RE RD+ RS S + S R H S+S S S ++
Sbjct: 289 RIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGSSIQRHSPS 348
Query: 74 EKKETKETKSKERQIT 89
+++ + S +R +T
Sbjct: 349 PRRKRTPSPSYQRTLT 364
Score = 33.9 bits (76), Expect = 0.058
Identities = 39/131 (29%), Positives = 50/131 (38%), Gaps = 29/131 (22%)
Query: 1 MGRSRSRSPRRERRRSR----------STSRERERRRRERSRSRERDR----------RR 40
MGRSR R P + SR S++ RS ERDR R
Sbjct: 560 MGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARD 619
Query: 41 SRSRSPHRRRSRSPRRHRSTSP-SPSRLKERRDE-EKKETKETKSKER-------QITEE 91
S H R R R R P SP R + R DE E+ E +E + +R + E
Sbjct: 620 SSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARER 679
Query: 92 DLEGKTEEEIE 102
D E + + E E
Sbjct: 680 DRERERDRERE 690
Score = 29.6 bits (65), Expect = 1.1
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
Query: 3 RSRSRSPRRERRRSRSTSR--ERERRRRERSRSRERDRRRSRS--------RSPHRRRSR 52
R+ SRS R R RS R E + SR + D S S RS + R R
Sbjct: 548 RNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDR 607
Query: 53 SPRRHRSTSPSPSRL------KERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
P R S ++RRD +++ + + Q ++LE E
Sbjct: 608 YPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERRE 661
Score = 28.1 bits (61), Expect = 3.2
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 30 RSRSRERDRRRSRSRSPH--RRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQ 87
R + + RRS R R R ++ R+ T P +E +KE+ + +E++
Sbjct: 66 RGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRNTEESSSPVRKESSRGRHREKE 125
Query: 88 ---ITEEDLEGKTEEEIE 102
IT+E EE +E
Sbjct: 126 DIKITKERTPESEEENVE 143
Score = 28.1 bits (61), Expect = 3.2
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
GR + + ER+ S R E+ +E+ S ++ R ++ R R++ H S
Sbjct: 887 GRWKEEDRKPERKESS--RRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQ-S 943
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKK 119
DE KK+ K K ++ E+D+ G IE G F KG+K
Sbjct: 944 EDRETSDRAHDENKKKAKIQKKPIKKKKEDDV-GIERGNIETTSEDG-QVFSPKKGQK 999
Score = 27.3 bits (59), Expect = 5.4
Identities = 18/55 (32%), Positives = 20/55 (36%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRR 56
GR R SRS R R R+ R R SRS + R RS R
Sbjct: 512 GRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGR 566
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 63.9 bits (154), Expect = 5e-11
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 11/104 (10%)
Query: 3 RSRSRSPR-RERRRSRSTSRERERR---RRERSRSRERDRRRSRSRSPHRRRS--RSPRR 56
R+R R R R R RSR +SR +RR R+ RSR R+RRRSRSR R RS RS R+
Sbjct: 283 RARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERK 342
Query: 57 HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
HRS S R K R + K +KS++R E+D + K +E+
Sbjct: 343 HRSRSRDRRRSKSR--DRKSYKHRSKSRDR---EQDRKSKEKEK 381
Score = 59.3 bits (142), Expect = 1e-09
Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 19/116 (16%)
Query: 3 RSRSRSPRRERRRSRSTSRERER---RRRERSRSRERDRRRSRSRSPHRRRSRSPRR--- 56
RSR S +RR SRS +R R RRR RSR R R R RS HR RSR RR
Sbjct: 296 RSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKS 355
Query: 57 -------HRSTS-----PSPSRLKERR-DEEKKETKETKSKERQITEEDLEGKTEE 99
HRS S S+ KE+R ++KK + ++ S+E+Q + + E K +
Sbjct: 356 RDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKESD 411
Score = 57.0 bits (136), Expect = 6e-09
Identities = 45/158 (28%), Positives = 62/158 (39%), Gaps = 16/158 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRS--------------RSRSPHR 48
R R R+ RR +ER R R R RSR R R S RSRS R
Sbjct: 263 REREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRER 322
Query: 49 RRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMG 108
RRSRS R RS S S K R ++ + +KS++R+ + + + E+ K
Sbjct: 323 RRSRSRDRRRSRSHDRSERKHR--SRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380
Query: 109 FASFDSTKGKKVDGSVNAYAINVSQKRKYRQYMNRKGG 146
D K GS + + + + K N G
Sbjct: 381 KRGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNG 418
Score = 56.2 bits (134), Expect = 1e-08
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR--RSRSPRRHRST 60
R R R R +RR RE+ER R R R R R R SR+ RR RSR +R RS
Sbjct: 261 REREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSR 320
Query: 61 SPSPSRLKERRDEEKKETKETKSKER 86
SR ++RR + E K + R
Sbjct: 321 ERRRSRSRDRRRSRSHDRSERKHRSR 346
Score = 56.2 bits (134), Expect = 1e-08
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERD--RRRSRSRSPHRRRSRSPRRHRS 59
RSRSR RR R RS + R R R R RS+SR+R + RS+SR + R + R
Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRG 383
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
+ S +K E++ E T+SKE T+ ++ G +E+
Sbjct: 384 SDDKKSSVKSGSREKQSEDTNTESKESD-TKNEVNGTSED 422
Score = 55.8 bits (133), Expect = 1e-08
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERD------------RRRSRSRSPHRRR 50
R ++ R R RERER RER R RE + R+RSRSRS H R
Sbjct: 243 RDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSR 302
Query: 51 SRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKER 86
+ R RS SR +ERR ++ + ++S +R
Sbjct: 303 TSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDR 338
Score = 53.1 bits (126), Expect = 9e-08
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSR-ERDRRRSR---SRSPHRRRSRSPR-RH 57
R R+ P R+ R + +ERE R +ER R R ER+R+R R R R R R R R
Sbjct: 235 RKRTEEPDRDERLKKE-KQEREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQ 87
RS S SR +RR ++ K ++S+ER+
Sbjct: 294 RSRSRHSSRTSDRRCSRSRDHKRSRSRERR 323
Score = 47.8 bits (112), Expect = 4e-06
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-----RRRERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
R RSRS R R+ RS SR+R R R+ + RS+ RDR + R +R +
Sbjct: 330 RRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDK-- 387
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEEDL--EGKTE 98
+S+ S SR K+ D + + E T ED+ EG T+
Sbjct: 388 KSSVKSGSREKQSEDTNTESKESDTKNEVNGTSEDIKSEGDTQ 430
Score = 37.4 bits (85), Expect = 0.005
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 17 RSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKK 76
++T E + + R+R+ +RD R + + R + R R K RR+EE++
Sbjct: 224 KATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKERERER----EERERKRRREEEER 279
Query: 77 ETKETKSKERQ 87
E + + +ER+
Sbjct: 280 EKERARDRERR 290
Score = 28.5 bits (62), Expect = 2.4
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 7 RSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSR 66
R + R ER+ R +S E +RR R H R + S + S + P+
Sbjct: 67 RKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRG---HARLALSQNQQSSGAAGPTG 123
Query: 67 LKERRDEEKKETKETKSKE--RQITEEDLEGKTEEEIEMMKLM 107
++EEK + K +QI E EGK EE MMKL+
Sbjct: 124 ----KNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLV 162
Score = 27.7 bits (60), Expect = 4.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 48 RRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEE 91
R+R+ P R +ER E ++E +E + K R+ EE
Sbjct: 235 RKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEE 278
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 63.9 bits (154), Expect = 5e-11
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 11/104 (10%)
Query: 3 RSRSRSPR-RERRRSRSTSRERERR---RRERSRSRERDRRRSRSRSPHRRRS--RSPRR 56
R+R R R R R RSR +SR +RR R+ RSR R+RRRSRSR R RS RS R+
Sbjct: 283 RARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERK 342
Query: 57 HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
HRS S R K R + K +KS++R E+D + K +E+
Sbjct: 343 HRSRSRDRRRSKSR--DRKSYKHRSKSRDR---EQDRKSKEKEK 381
Score = 59.3 bits (142), Expect = 1e-09
Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 19/116 (16%)
Query: 3 RSRSRSPRRERRRSRSTSRERER---RRRERSRSRERDRRRSRSRSPHRRRSRSPRR--- 56
RSR S +RR SRS +R R RRR RSR R R R RS HR RSR RR
Sbjct: 296 RSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKS 355
Query: 57 -------HRSTS-----PSPSRLKERR-DEEKKETKETKSKERQITEEDLEGKTEE 99
HRS S S+ KE+R ++KK + ++ S+E+Q + + E K +
Sbjct: 356 RDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKESD 411
Score = 57.0 bits (136), Expect = 6e-09
Identities = 45/158 (28%), Positives = 62/158 (39%), Gaps = 16/158 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRS--------------RSRSPHR 48
R R R+ RR +ER R R R RSR R R S RSRS R
Sbjct: 263 REREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRER 322
Query: 49 RRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMG 108
RRSRS R RS S S K R ++ + +KS++R+ + + + E+ K
Sbjct: 323 RRSRSRDRRRSRSHDRSERKHR--SRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380
Query: 109 FASFDSTKGKKVDGSVNAYAINVSQKRKYRQYMNRKGG 146
D K GS + + + + K N G
Sbjct: 381 KRGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNG 418
Score = 56.2 bits (134), Expect = 1e-08
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR--RSRSPRRHRST 60
R R R R +RR RE+ER R R R R R R SR+ RR RSR +R RS
Sbjct: 261 REREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSR 320
Query: 61 SPSPSRLKERRDEEKKETKETKSKER 86
SR ++RR + E K + R
Sbjct: 321 ERRRSRSRDRRRSRSHDRSERKHRSR 346
Score = 56.2 bits (134), Expect = 1e-08
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR-RERSRSRERD--RRRSRSRSPHRRRSRSPRRHRS 59
RSRSR RR R RS + R R R R RS+SR+R + RS+SR + R + R
Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRG 383
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEE 99
+ S +K E++ E T+SKE T+ ++ G +E+
Sbjct: 384 SDDKKSSVKSGSREKQSEDTNTESKESD-TKNEVNGTSED 422
Score = 55.8 bits (133), Expect = 1e-08
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERD------------RRRSRSRSPHRRR 50
R ++ R R RERER RER R RE + R+RSRSRS H R
Sbjct: 243 RDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSR 302
Query: 51 SRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKER 86
+ R RS SR +ERR ++ + ++S +R
Sbjct: 303 TSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDR 338
Score = 53.1 bits (126), Expect = 9e-08
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSR-ERDRRRSR---SRSPHRRRSRSPR-RH 57
R R+ P R+ R + +ERE R +ER R R ER+R+R R R R R R R R
Sbjct: 235 RKRTEEPDRDERLKKE-KQEREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQ 87
RS S SR +RR ++ K ++S+ER+
Sbjct: 294 RSRSRHSSRTSDRRCSRSRDHKRSRSRERR 323
Score = 47.8 bits (112), Expect = 4e-06
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-----RRRERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
R RSRS R R+ RS SR+R R R+ + RS+ RDR + R +R +
Sbjct: 330 RRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDK-- 387
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEEDL--EGKTE 98
+S+ S SR K+ D + + E T ED+ EG T+
Sbjct: 388 KSSVKSGSREKQSEDTNTESKESDTKNEVNGTSEDIKSEGDTQ 430
Score = 37.4 bits (85), Expect = 0.005
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 17 RSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKK 76
++T E + + R+R+ +RD R + + R + R R K RR+EE++
Sbjct: 224 KATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKERERER----EERERKRRREEEER 279
Query: 77 ETKETKSKERQ 87
E + + +ER+
Sbjct: 280 EKERARDRERR 290
Score = 28.5 bits (62), Expect = 2.4
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 7 RSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSR 66
R + R ER+ R +S E +RR R H R + S + S + P+
Sbjct: 67 RKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRG---HARLALSQNQQSSGAAGPTG 123
Query: 67 LKERRDEEKKETKETKSKE--RQITEEDLEGKTEEEIEMMKLM 107
++EEK + K +QI E EGK EE MMKL+
Sbjct: 124 ----KNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLV 162
Score = 27.7 bits (60), Expect = 4.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 48 RRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEE 91
R+R+ P R +ER E ++E +E + K R+ EE
Sbjct: 235 RKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEE 278
>gi|41393554 LUC7-like isoform b [Homo sapiens]
Length = 371
Score = 62.8 bits (151), Expect = 1e-10
Identities = 51/103 (49%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR---RSRS---PRR 56
R R R ER RS SR R+RR RSRSR+R RRRSRS S RR RSRS RR
Sbjct: 245 RRREEREREERLSRRSGSRTRDRR---RSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRR 301
Query: 57 HRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLE-GKTE 98
HRS S S SR RR + K S+ER EE E G++E
Sbjct: 302 HRSRSRSHSR-GHRRASRDRSAKYKFSRERASREESWESGRSE 343
Score = 52.8 bits (125), Expect = 1e-07
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3 RSRSRSPRRERRR-SRSTSRERERRRRERSRSRERDRRR-SRSRSPHRRRSRSPRRHRST 60
R RSRS RERR+ SRS SR+R RR R RSRS R RR SR RS + SR R R
Sbjct: 277 RRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKYKFSRE-RASREE 335
Query: 61 SPSPSRLKERRDEEKKETKETKSKERQITEED 92
S R + + + E+ K R+ E++
Sbjct: 336 SWESGRSERGPPDWRLESSNGKMASRRSEEKE 367
Score = 30.8 bits (68), Expect = 0.49
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 25 RRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKER-----RDEEKKETK 79
R + ++ R +++ R++ RRR R R + S SR ++R RD ++ ++
Sbjct: 222 REKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSR 281
Query: 80 ETKSKERQIT 89
T + R+++
Sbjct: 282 STSRERRKLS 291
>gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing A [Homo sapiens]
Length = 312
Score = 62.8 bits (151), Expect = 1e-10
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRS-PHRRRSRSP-----RR 56
RSRSRSPRR RSRS R RRER RS+ R RSRSR HR RS+SP R
Sbjct: 233 RSRSRSPRR---RSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHR 289
Query: 57 HRSTSPSPSRLKERRDEEKK 76
HRS S SP R K+ + ++
Sbjct: 290 HRSHSKSPERSKKSHKKSRR 309
Score = 57.4 bits (137), Expect = 5e-09
Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 7 RSPRRERRRSRSTS-RERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPS 65
RSP RRSRS S R R R + RS S R+R RS+S HR RSR RRHRS S SP
Sbjct: 225 RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-RRHRSRSKSPG 283
Query: 66 RLKERRDEEKKETKETKSKERQ 87
+ R ++ E K +
Sbjct: 284 HHRSHRHRSHSKSPERSKKSHK 305
Score = 46.6 bits (109), Expect = 9e-06
Identities = 36/101 (35%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 5 RSRSPRRERRRSRSTSRERE----RRRRERSRSRERDRRRSRSRSP----HRRRSRSPRR 56
R SP RR R + R R RR RSRS R R + RSP R RS+SPRR
Sbjct: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRR 265
Query: 57 H-----------RSTSPSPSRLKERRDEEKKETKETKSKER 86
H RS SP R R K + KS ++
Sbjct: 266 HRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKK 306
Score = 37.0 bits (84), Expect = 0.007
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 18 STSRERERRRRERSRSRERDRRRSRS-----RSP----HRRRSRSPRRHRSTSP---SPS 65
S E E + ER S + RR R RSP R RSRSPRR RS SP SPS
Sbjct: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR-RSRSPKRRSPS 252
Query: 66 RLKERRDEEKKETKETKSKERQ 87
+ER + ++S++R+
Sbjct: 253 PRRERHRSKSPRRHRSRSRDRR 274
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 61.6 bits (148), Expect = 3e-10
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 11 RERRRSRSTSRERERRRRERSRSR--ERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLK 68
R+R R R T RER+R + ++ R ERDR+R R R+ R R R + R +
Sbjct: 19 RQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRER 78
Query: 69 ERRDEEKKETKETKSKERQI---TEEDLEGKTEEEIEMMKL 106
ER + ++ET+ + KER+ TE D E + ++E EM ++
Sbjct: 79 ERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERV 119
Score = 57.4 bits (137), Expect = 5e-09
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 5 RSRSPRRERRRSRSTSRERERRRR-------ERSRSRERDRRRSRSRSPHRRRSRSPRRH 57
R R R+R R R T RER++ R +R R ++++R R R R + + R
Sbjct: 74 RQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREKQKEMGRE 133
Query: 58 RSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEE 100
R T R +ER+ E ++ET + E + E + E K E E
Sbjct: 134 RQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERE 176
Score = 56.6 bits (135), Expect = 8e-09
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R+R R+R R + T RE ER+R ER R R+R R R R R R R
Sbjct: 52 RERNRERDRDREREKQTDREGERQR-ERERDRDRQRETERERDKERETDRHTETDRERQK 110
Query: 63 SPSRLKER-RDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R ER RD E+++ KE + + E D E + + E E
Sbjct: 111 QKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERE 151
Score = 54.7 bits (130), Expect = 3e-08
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRR---RERSRSRERDRRRSRSRSPHRRRSRSPRRHRS 59
R+R R R+R R + T RE ER+R R+R R RE +R R + R R R +
Sbjct: 54 RNRERD--RDREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQ 111
Query: 60 TSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R+++R E++KE + +R+ T+ + E + E E E
Sbjct: 112 KEREMERVRDREREKQKEMGRERQTDRE-TDRERERQAERERE 153
Score = 53.9 bits (128), Expect = 5e-08
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSP 64
R R ++ER R RERE+++ E R R+ DR R R R R R R T
Sbjct: 106 RERQKQKEREMERVRDREREKQK-EMGRERQTDRETDRERERQAERERETGRERKTEDRH 164
Query: 65 SRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
+ R E++ +ETK +ER D+E + + E +
Sbjct: 165 RERERERKRERERKRETKERER---HTDMERERQRETD 199
Score = 51.2 bits (121), Expect = 3e-07
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSR-SRSPHRRRSRSPRRHRSTS 61
R R R ++E R R T RE + R RER RER+ R R + HR R R +R R
Sbjct: 120 RDREREKQKEMGRERQTDRETD-RERERQAERERETGRERKTEDRHRERERERKRERERK 178
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLE 94
+ D E++ +ET K + E + E
Sbjct: 179 RETKERERHTDMERERQRETDRKRDRQRESERE 211
Score = 51.2 bits (121), Expect = 3e-07
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST 60
MGR R +R R R RERE R ++ R R+R R R R R+R R +
Sbjct: 130 MGRERQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHT- 188
Query: 61 SPSPSRLKERRDEEKKETKETKSKER 86
R ++R + K++ + +ER
Sbjct: 189 --DMERERQRETDRKRDRQRESERER 212
Score = 45.4 bits (106), Expect = 2e-05
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
+ R R+R R + RE R+ +R RER+R+ R R R R ++ RHR
Sbjct: 112 KEREMERVRDREREKQKEMGRE-RQTDRETDRERERQAERERETGRER-KTEDRHRERER 169
Query: 63 SPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
R +ER+ E K+ + T + + E D + + E E
Sbjct: 170 ERKRERERKRETKERERHTDMERERQRETDRKRDRQRESE 209
Score = 45.4 bits (106), Expect = 2e-05
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
R R R RER R E R RER R RER+R+R + R R R R
Sbjct: 142 RERERQAERERETGRERKTEDRHRERERERKRERERKR---ETKERERHTDMERERQRET 198
Query: 63 SPSRLKERRDEEKKE 77
R ++R E +++
Sbjct: 199 DRKRDRQRESERERD 213
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 61.6 bits (148), Expect = 3e-10
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 3 RSRSRSPRRERRRSRSTSRERERR-RRERSRSRERDRRRSRSRSPHRR-RSRSPRRHRST 60
RSRSRS RR R RSR +SR R R + RSRSR R + RSRSRS R+ RS+S + +S
Sbjct: 195 RSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSD 254
Query: 61 --SPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKT 97
S S SR + + + EK ++ ++ + D++ K+
Sbjct: 255 RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKS 293
Score = 57.8 bits (138), Expect = 4e-09
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 9 PRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLK 68
PR RRS S SR R R RR RSR R RR SRSRS +SRS R RS S SR K
Sbjct: 183 PRTSHRRSYSGSRSRSRSRR---RSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSK 239
Query: 69 ERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKKVDGSVNAYA 128
R+ K ++K K + + ++++E E + + GK G + + +
Sbjct: 240 GRKSRSK---SKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGK---GDIKSKS 293
Query: 129 INVSQKR 135
+ SQ R
Sbjct: 294 RSRSQSR 300
Score = 49.7 bits (117), Expect = 1e-06
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRER------------SRSRERD-----RRRSRS 43
+ +SRSRS R + RSRS S+ R+ R + + SRSR +D R RSRS
Sbjct: 219 ISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRS 278
Query: 44 RSPH-------RRRSRSPRRHRSTSP---SPSRLKERRDEEKKETKETKSKER 86
RSP + +SRS + RS SP PS+ + K+ T ++S+ R
Sbjct: 279 RSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSR 331
Score = 48.9 bits (115), Expect = 2e-06
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRR---------RSRSRSPHRRRSRS 53
RS+S+S + R S S SR R + E+SRSR R R +S+SRS + RS S
Sbjct: 244 RSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRSNS 303
Query: 54 P-----RRHRSTSPSPSRLKERRDEEKKETKETKSK 84
P + RS SP P R R + ++S+
Sbjct: 304 PLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSR 339
Score = 48.5 bits (114), Expect = 2e-06
Identities = 41/93 (44%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 5 RSRSPRRERRRSRSTSRERERRRRERSRSRER----DRRRSRSRSPHRRRSRSPRRHRST 60
RS S R R RSR SR R RR SRSR R R RSRSRS R RSRS R +S
Sbjct: 189 RSYSGSRSRSRSRRRSRSRSRRS---SRSRSRSISKSRSRSRSRSKGRSRSRSKGR-KSR 244
Query: 61 SPSPSRLK-------ERRDEEKKETKETKSKER 86
S S S+ K R K E ++++S+ R
Sbjct: 245 SKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSR 277
Score = 35.8 bits (81), Expect = 0.015
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 3 RSRSRSPRRERR---RSRSTSRERERRRR------ERSRS------RERDRRRSRSRSPH 47
RSRSRSP+ + +S+S SR + R ++RS R R RSRSRS
Sbjct: 275 RSRSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKS 334
Query: 48 RRRSRSPRR 56
R RSRS R
Sbjct: 335 RSRSRSSSR 343
Score = 27.7 bits (60), Expect = 4.1
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 3 RSRSRSPRRERRRSRSTSRE 22
RSRSRS + R RSRS+SR+
Sbjct: 325 RSRSRSRSKSRSRSRSSSRD 344
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 61.6 bits (148), Expect = 3e-10
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDR-RRSRSRSPHRRRSRSPRRHRST 60
G SRSRS RSRS S ERERR +ER R +ERDR ++ R R R R+ S
Sbjct: 55 GGSRSRS------RSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSL 108
Query: 61 SPSPSR-LKERRDEEKKETKE-----TKSKERQITEEDL--EGKTEEEIEMM-KLMGFAS 111
SP + K R+D + K+ +E K K + ++ E+L + K EEE E K + A
Sbjct: 109 SPGRGKDFKSRKDRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAE 168
Query: 112 FDSTKGKKVDGSVNAYAINVSQKRKYRQYMNRKG 145
++ K+ V + ++RK R+ G
Sbjct: 169 REAEALKRRQQEVEERQRMLEEERKKRKQFQDLG 202
Score = 58.9 bits (141), Expect = 2e-09
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 3 RSRSRSP-RRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
+ R SP + ER+RSR+ RER+R R +R S +DR+R RSR R SRS R RS S
Sbjct: 9 KDRDASPSKEERKRSRTPDRERDRDR-DRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKS 67
Query: 62 PSPSRLKERRDEEKKETKETKSKER 86
R + R+ +K+ + K ++R
Sbjct: 68 AERERRHKERERDKERDRNKKDRDR 92
Score = 53.1 bits (126), Expect = 9e-08
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
Query: 3 RSRSRSPRRERRR--SRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST 60
R RSR+P RER R R +S ++R+R R RDRRR SRS R RS+S R R
Sbjct: 20 RKRSRTPDRERDRDRDRKSSPSKDRKRH-----RSRDRRRGGSRSRSRSRSKSAERER-- 72
Query: 61 SPSPSRLKER-RDEEKKETKETKSKERQITEEDLEGK 96
R KER RD+E+ K+ + +++ D + K
Sbjct: 73 -----RHKERERDKERDRNKKDRDRDKDGHRRDKDRK 104
Score = 51.6 bits (122), Expect = 3e-07
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 12 ERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERR 71
++ R S S+E +R R R R+RDR R S S R+R RS R R S S SR + +
Sbjct: 8 KKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKS 67
Query: 72 DEEKKETKE-TKSKERQITEED 92
E ++ KE + KER ++D
Sbjct: 68 AERERRHKERERDKERDRNKKD 89
Score = 35.4 bits (80), Expect = 0.020
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 24 ERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKETKS 83
+++ R+ S S+E +R+R SR+P R R R R R +SPS R + R + ++ ++S
Sbjct: 7 DKKDRDASPSKE-ERKR--SRTPDRERDRD--RDRKSSPSKDRKRHRSRDRRRGGSRSRS 61
Query: 84 KERQITEEDLEGKTEEE 100
+ R + E E E
Sbjct: 62 RSRSKSAERERRHKERE 78
Score = 30.8 bits (68), Expect = 0.49
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 1 MGRSRSRSPRRERRRSRSTSRER--ERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHR 58
+ ++ + +RR+ R+R E R++R + ++ R+ RR R R R
Sbjct: 164 LSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMER 223
Query: 59 STSPSPSRL-KERRDEEKKETKETKS-KERQI 88
T+ + +++ EEK ++KE + KER +
Sbjct: 224 ETNGNEDEEGRQKIREEKDKSKELHAIKERYL 255
Score = 30.0 bits (66), Expect = 0.83
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 21 RERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPSRLKERRDEEKKETKE 80
RE E +R + ER R R R++ + R P +ERR+ ++ET
Sbjct: 169 REAEALKRRQQEVEERQRMLEEERKK-RKQFQDLGRKMLEDPQERERRERRERMERETNG 227
Query: 81 TKSKE--RQITEEDLEGKTEEEIEMMKLMG 108
+ +E ++I EE + K I+ L G
Sbjct: 228 NEDEEGRQKIREEKDKSKELHAIKERYLGG 257
>gi|4826690 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Homo sapiens]
Length = 1220
Score = 61.6 bits (148), Expect = 3e-10
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 14/129 (10%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSP 62
RSRSR R+R R R +R+R+ +RR RSRSR R R R R++ R RSRS RS SP
Sbjct: 176 RSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRS----RSQSP 231
Query: 63 SPSRLKERRDEEK-KETKETKSKERQITEEDLEGKTEEEI---EMMKLMGFASFDSTKG- 117
K+R+D +K E + +++ + E T +I ++ +M F F +G
Sbjct: 232 P----KDRKDRDKYGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGL 287
Query: 118 -KKVDGSVN 125
K+ +G V+
Sbjct: 288 RKRWEGLVH 296
Score = 50.1 bits (118), Expect = 8e-07
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 1 MGRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRST 60
M + + +R+ T +++ R R+R+R R+RDR R+R R H+RR RS R RS
Sbjct: 153 MPSAAGQEKQRDAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRD-HKRRHRSRSRSRSR 211
Query: 61 SPSPSRLKER---RDEEKKETKETKSKER 86
+ +++K R R + K+ K +++
Sbjct: 212 TRERNKVKSRYRSRSRSQSPPKDRKDRDK 240
Score = 49.3 bits (116), Expect = 1e-06
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 15 RSRSTSRERERRRRERSRSRERDRRRSRSRSPHRRRSRS-PRRHRSTSPSPSRLKERRDE 73
+ + E R +++ RSR RDR R R R R R R RRHRS S S SR +ER
Sbjct: 159 QEKQRDAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKV 218
Query: 74 EKKETKETKSKERQITEEDLEGKTEEEIE 102
+ + ++S+ +D + E ++
Sbjct: 219 KSRYRSRSRSQSPPKDRKDRDKYGERNLD 247
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 61.2 bits (147), Expect = 3e-10
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRER-DRRRSRSRSPHRRR--------SRS 53
RS S RERRR+RS SRER RR RSRSR+R R SRSRS RR+ S +
Sbjct: 596 RSNRNSIERERRRNRSPSRER---RRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGN 652
Query: 54 PRRHRSTSPSPSRLKER-RDEEKKETKETKSKERQITEEDLEGKTEEE 100
+H+ + R KER R +K K+ K +ER+ + + K EE+
Sbjct: 653 SHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEK 700
Score = 60.1 bits (144), Expect = 8e-10
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 19/116 (16%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRER----DRRRSRSRSPHRR--------- 49
R R+RSP RERRRSRS SR+R R RSRSR+R D+R + S + H+
Sbjct: 606 RRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQER 665
Query: 50 ---RSRSPRRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIE 102
RSRS + R + +ER +++KE ++ + K+ + + +D K + E E
Sbjct: 666 KKERSRSIDKDRK---KKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESE 718
Score = 59.7 bits (143), Expect = 1e-09
Identities = 55/175 (31%), Positives = 77/175 (44%), Gaps = 35/175 (20%)
Query: 4 SRSRSPRRERRRSRSTSRERE-------------RRRRERSRSRERDRRRSRSRSPHRRR 50
SRSRSP + RRSRS S R RRR S ER+RRR+RS S RRR
Sbjct: 559 SRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRR 618
Query: 51 SRSPRRHRSTS-PSPSRLKERR----------------DEEKKETKETKSKERQITEEDL 93
SRS R R T+ S SR ++RR E KE + K + R I ++
Sbjct: 619 SRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRK 678
Query: 94 EGKTEEEIEMMKLMGFASFDSTKGKKVDGSVNAYAINVSQKRKYRQYMNRKGGFN 148
+ E E E K + K ++ D ++ + +KR+ + +R G +
Sbjct: 679 KKDKEREREQDKRK-----EKQKREEKDFKFSSQDDRLKRKRESERTFSRSGSIS 728
Score = 47.4 bits (111), Expect = 5e-06
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 4 SRSRSPRRERRRSRSTSRE-RERRRRERSRSR--ERDRRRSRSRSPHRRRS--RSPRRHR 58
SRS SP+R++R SRS S + RR R RS SR + + R+R + RRRS S R R
Sbjct: 547 SRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERER 606
Query: 59 STSPSPSRLKER---RDEEKKETKETKSKER 86
+ SPSR + R R +++ + ++S+ R
Sbjct: 607 RRNRSPSRERRRSRSRSRDRRTNRASRSRSR 637
Score = 41.2 bits (95), Expect = 4e-04
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR--------RSRSPR 55
S S S R SRS+S +R ++R RSRS RRSRSRS RR R +
Sbjct: 535 SYSSSSGSSRTSSRSSSPKR-KKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRD 593
Query: 56 RHRSTSPSPSRLKERRDEEKKETKETKSKER 86
R RS S R + R +E + ++S+ R
Sbjct: 594 RRRSNRNSIERERRRNRSPSRERRRSRSRSR 624
Score = 40.4 bits (93), Expect = 6e-04
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERER-RRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTS 61
+ RSRS ++R++ + RERE+ +R+E+ + E+D + S S+ +R R R S S
Sbjct: 667 KERSRSIDKDRKK-KDKEREREQDKRKEKQKREEKDFKFS-SQDDRLKRKRESERTFSRS 724
Query: 62 PSPSRLKERRDEEKKETKETKSKERQITEEDLEGKTEEEIEMMKLMGFASFDSTKGKKVD 121
S S R D + K T ++ + D G++ E S S+K KK
Sbjct: 725 GSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSSGRSSSE----------SPGSSKEKKAK 774
Query: 122 GSVNAYAINVSQKRKYRQYMNRK 144
++ + +V + ++ + +RK
Sbjct: 775 KPKHSRSRSVEKSQRSGKKASRK 797
Score = 36.6 bits (83), Expect = 0.009
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 4 SRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSP----HRRRSRSPRRHRS 59
SR+ S S +S R RS S +R +R SRSRSP R RSRS R
Sbjct: 522 SRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIK 581
Query: 60 TSPSPSRLKER------RDEEKKETKETKSKERQ 87
+ +R+K R R+ ++E + +S R+
Sbjct: 582 IESNRARVKIRDRRRSNRNSIERERRRNRSPSRE 615
Score = 32.3 bits (72), Expect = 0.17
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRSPHRR----RSRSP---- 54
RS S S SR++S S S R SRS SP R+ RSRSP
Sbjct: 509 RSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKA 568
Query: 55 RRHRSTSPSPSRLKERRDEEKKETKETKSKERQITEED 92
RR RS S S R+K + + + ++ + R E +
Sbjct: 569 RRSRSRSYS-RRIKIESNRARVKIRDRRRSNRNSIERE 605
Score = 28.5 bits (62), Expect = 2.4
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 2 GRSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRS-PHRRRSRS 53
GRS S SP S ++ ++ + RSRS E+ +R + S H+ +SRS
Sbjct: 758 GRSSSESP------GSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRS 804
Score = 26.6 bits (57), Expect = 9.2
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 24 ERRRRERSRSRERDR-RRSRSRSPHRRRSRSPRRHRSTSPS-PSRLKERRDEEKKET--- 78
E+ RE+ + E++R + RS+ + + + P P R K DEE+++T
Sbjct: 241 EKMEREKQKKLEKERMEQQRSQLSKKEKKATEDAEGGDGPRLPQRSKFDSDEEEEDTENV 300
Query: 79 ------KETKSKERQITEEDLEGK-TEEEIEMMKLM 107
K T+S EE + + TEEE E ++
Sbjct: 301 EAASSGKVTRSPSPVPQEEHSDPEMTEEEKEYQMML 336
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.126 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,698,519
Number of Sequences: 37866
Number of extensions: 285285
Number of successful extensions: 19350
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 444
Number of HSP's that attempted gapping in prelim test: 4134
Number of HSP's gapped (non-prelim): 7459
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.