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Search of human proteins with 239757132
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757132 PREDICTED: hypothetical protein [Homo sapiens]
(583 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757132 PREDICTED: hypothetical protein [Homo sapiens] 1185 0.0
gi|239751635 PREDICTED: hypothetical protein XP_002347941 [Homo ... 437 e-122
gi|239746147 PREDICTED: hypothetical protein XP_002344287 [Homo ... 437 e-122
gi|167621456 kinase suppressor of ras 2 [Homo sapiens] 36 0.086
gi|239756274 PREDICTED: hypothetical protein [Homo sapiens] 36 0.11
gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo ... 36 0.11
gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo ... 36 0.11
gi|83035136 F-box protein 31 [Homo sapiens] 35 0.19
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 35 0.19
gi|239754772 PREDICTED: hypothetical protein [Homo sapiens] 35 0.25
gi|239749310 PREDICTED: hypothetical protein XP_002346992 [Homo ... 35 0.25
gi|239743404 PREDICTED: hypothetical protein XP_002342840 [Homo ... 35 0.25
gi|239509103 PREDICTED: hypothetical protein [Homo sapiens] 35 0.25
gi|239744649 PREDICTED: hypothetical protein XP_002343213 [Homo ... 34 0.32
gi|17402900 far upstream element-binding protein [Homo sapiens] 34 0.42
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 34 0.42
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 34 0.42
gi|239755873 PREDICTED: hypothetical protein [Homo sapiens] 33 0.55
gi|239750345 PREDICTED: hypothetical protein XP_002347375 [Homo ... 33 0.55
gi|116292174 fidgetin-like 2 [Homo sapiens] 33 0.55
gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo... 33 0.95
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 33 0.95
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 33 0.95
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 33 0.95
gi|153251792 hypothetical protein LOC54854 [Homo sapiens] 32 1.2
gi|118402590 myosin XV [Homo sapiens] 32 1.6
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 32 1.6
gi|110347412 latent transforming growth factor beta binding prot... 32 1.6
gi|56243533 stromal cell-derived factor 2-like 1 precursor [Homo... 32 1.6
>gi|239757132 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 1185 bits (3066), Expect = 0.0
Identities = 583/583 (100%), Positives = 583/583 (100%)
Query: 1 MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ 60
MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ
Sbjct: 1 MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ 60
Query: 61 VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT 120
VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT
Sbjct: 61 VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT 120
Query: 121 TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ 180
TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ
Sbjct: 121 TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ 180
Query: 181 LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREEWGQGLGEQRSRMALPAGQ 240
LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREEWGQGLGEQRSRMALPAGQ
Sbjct: 181 LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREEWGQGLGEQRSRMALPAGQ 240
Query: 241 TPPATAPSVSVSRSLDCSSSVSRWDTKSSGRMRKEFVGITLLLHDLASQKFPSGGPWSDG 300
TPPATAPSVSVSRSLDCSSSVSRWDTKSSGRMRKEFVGITLLLHDLASQKFPSGGPWSDG
Sbjct: 241 TPPATAPSVSVSRSLDCSSSVSRWDTKSSGRMRKEFVGITLLLHDLASQKFPSGGPWSDG 300
Query: 301 HCHLDLKKDTWSLGCRMVLCAFCRSSAAELHCCRTTASSRLMTWDPYPGAQRGHLCLFMP 360
HCHLDLKKDTWSLGCRMVLCAFCRSSAAELHCCRTTASSRLMTWDPYPGAQRGHLCLFMP
Sbjct: 301 HCHLDLKKDTWSLGCRMVLCAFCRSSAAELHCCRTTASSRLMTWDPYPGAQRGHLCLFMP 360
Query: 361 DSAGSKPPGGGWQLPDKAIQDEVAAGAGELEKVVAGIAGSAGPLLAGKTVGGRGTFGFVR 420
DSAGSKPPGGGWQLPDKAIQDEVAAGAGELEKVVAGIAGSAGPLLAGKTVGGRGTFGFVR
Sbjct: 361 DSAGSKPPGGGWQLPDKAIQDEVAAGAGELEKVVAGIAGSAGPLLAGKTVGGRGTFGFVR 420
Query: 421 TSWRVGEEGAPSVLTSYMKMSKTRVATGSGKVVRNSVRNQDEAYMDVWKLWERKPPKATA 480
TSWRVGEEGAPSVLTSYMKMSKTRVATGSGKVVRNSVRNQDEAYMDVWKLWERKPPKATA
Sbjct: 421 TSWRVGEEGAPSVLTSYMKMSKTRVATGSGKVVRNSVRNQDEAYMDVWKLWERKPPKATA 480
Query: 481 PSMIQAQGVGLSHPGMTAQPHLPWQLRRAALLSCGPAHLQHVLELIDAEPELGHAGFEEL 540
PSMIQAQGVGLSHPGMTAQPHLPWQLRRAALLSCGPAHLQHVLELIDAEPELGHAGFEEL
Sbjct: 481 PSMIQAQGVGLSHPGMTAQPHLPWQLRRAALLSCGPAHLQHVLELIDAEPELGHAGFEEL 540
Query: 541 PQPEPSHPPATYLHEEQAHDEGASLAVAHLPVYQRVCLEGNKS 583
PQPEPSHPPATYLHEEQAHDEGASLAVAHLPVYQRVCLEGNKS
Sbjct: 541 PQPEPSHPPATYLHEEQAHDEGASLAVAHLPVYQRVCLEGNKS 583
>gi|239751635 PREDICTED: hypothetical protein XP_002347941 [Homo
sapiens]
Length = 241
Score = 437 bits (1123), Expect = e-122
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ 60
MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ
Sbjct: 1 MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ 60
Query: 61 VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT 120
VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT
Sbjct: 61 VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT 120
Query: 121 TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ 180
TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ
Sbjct: 121 TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ 180
Query: 181 LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREE 222
LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREE
Sbjct: 181 LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREE 222
Score = 42.0 bits (97), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 325 SSAAELHCCRTTASSRLMT 343
SSAAELHCCRTTASSRLMT
Sbjct: 223 SSAAELHCCRTTASSRLMT 241
>gi|239746147 PREDICTED: hypothetical protein XP_002344287 [Homo
sapiens]
Length = 241
Score = 437 bits (1123), Expect = e-122
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ 60
MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ
Sbjct: 1 MRCRISATAAMLSASRSRTAITSSLLWGRGRGGLHLALGLGLLAAAFAELRLQPLVLCSQ 60
Query: 61 VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT 120
VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT
Sbjct: 61 VLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPT 120
Query: 121 TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ 180
TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ
Sbjct: 121 TSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQ 180
Query: 181 LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREE 222
LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREE
Sbjct: 181 LQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREE 222
Score = 42.0 bits (97), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 325 SSAAELHCCRTTASSRLMT 343
SSAAELHCCRTTASSRLMT
Sbjct: 223 SSAAELHCCRTTASSRLMT 241
>gi|167621456 kinase suppressor of ras 2 [Homo sapiens]
Length = 921
Score = 36.2 bits (82), Expect = 0.086
Identities = 40/165 (24%), Positives = 61/165 (36%), Gaps = 18/165 (10%)
Query: 116 CSSPTTSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGV 175
C P S PR R A PR+ + P G P + + +PPG P
Sbjct: 207 CPPPPLESGHRSLPPSPRQRHAVRTPPRTPNIVTTVTPPGTPPMRKKNKLKPPGTPPPSS 266
Query: 176 RELLQL-------------QFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQ-RAVPLRE 221
R+L+ L +F+L R P ++ L L+ VG +P ++
Sbjct: 267 RKLIHLIPGFTALHRSKSHEFQLGHRVDEAHTPKAKKKSKPLNLKIHSSVGSCENIPSQQ 326
Query: 222 EWGQGLGEQRSRMALPAGQTP--PATAPSVSVSRSLDCSSSVSRW 264
L +RS + G P P+T P + + + SV RW
Sbjct: 327 R--SPLLSERSLRSFFVGHAPFLPSTPPVHTEANFSANTLSVPRW 369
>gi|239756274 PREDICTED: hypothetical protein [Homo sapiens]
Length = 775
Score = 35.8 bits (81), Expect = 0.11
Identities = 45/138 (32%), Positives = 56/138 (40%), Gaps = 36/138 (26%)
Query: 150 AQEPRGDGPRGRSARR--------------------RPP-GPHLPGVRELLQLQFKLSRR 188
AQ RGDGP G + R RPP G + V ELLQLQ + +
Sbjct: 511 AQYRRGDGPEGAGSGRDDRLEVLKADAEESPAAGLARPPTGQYAALVDELLQLQLEDAGA 570
Query: 189 GHRLAFPHLERLQLLLQLRHIVLVGQRA---VPLREEWGQGLGEQRSRMALPAGQTPP-A 244
G L H +R + G R+ VP E G +R+R LPA + PP A
Sbjct: 571 GRALL--HRDRGKE---------GGDRSAQLVPGAEAQSAAEGTERARDVLPAAKVPPAA 619
Query: 245 TAPSVSVSRSLDCSSSVS 262
APS S +L S S
Sbjct: 620 VAPSQRRSGTLPPSPRAS 637
>gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo
sapiens]
Length = 765
Score = 35.8 bits (81), Expect = 0.11
Identities = 45/138 (32%), Positives = 56/138 (40%), Gaps = 36/138 (26%)
Query: 150 AQEPRGDGPRGRSARR--------------------RPP-GPHLPGVRELLQLQFKLSRR 188
AQ RGDGP G + R RPP G + V ELLQLQ + +
Sbjct: 501 AQYRRGDGPEGAGSGRDDRLEVLKADAEESPAAGLARPPTGQYAALVDELLQLQLEDAGA 560
Query: 189 GHRLAFPHLERLQLLLQLRHIVLVGQRA---VPLREEWGQGLGEQRSRMALPAGQTPP-A 244
G L H +R + G R+ VP E G +R+R LPA + PP A
Sbjct: 561 GRALL--HRDRGKE---------GGDRSAQLVPGAEAQSAAEGTERARDVLPAAKVPPAA 609
Query: 245 TAPSVSVSRSLDCSSSVS 262
APS S +L S S
Sbjct: 610 VAPSQRRSGTLPPSPRAS 627
>gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo
sapiens]
Length = 765
Score = 35.8 bits (81), Expect = 0.11
Identities = 45/138 (32%), Positives = 56/138 (40%), Gaps = 36/138 (26%)
Query: 150 AQEPRGDGPRGRSARR--------------------RPP-GPHLPGVRELLQLQFKLSRR 188
AQ RGDGP G + R RPP G + V ELLQLQ + +
Sbjct: 501 AQYRRGDGPEGAGSGRDDRLEVLKADAEESPAAGLARPPTGQYAALVDELLQLQLEDAGA 560
Query: 189 GHRLAFPHLERLQLLLQLRHIVLVGQRA---VPLREEWGQGLGEQRSRMALPAGQTPP-A 244
G L H +R + G R+ VP E G +R+R LPA + PP A
Sbjct: 561 GRALL--HRDRGKE---------GGDRSAQLVPGAEAQSAAEGTERARDVLPAAKVPPAA 609
Query: 245 TAPSVSVSRSLDCSSSVS 262
APS S +L S S
Sbjct: 610 VAPSQRRSGTLPPSPRAS 627
>gi|83035136 F-box protein 31 [Homo sapiens]
Length = 539
Score = 35.0 bits (79), Expect = 0.19
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 160 GRSAR--RRPPGPHLPGVRELLQLQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAV 217
GR AR + P++P ++ +++ + HR+ P LE + +L IVL + V
Sbjct: 323 GRRARGTKITGDPNIPAGQQTVEIDLR-----HRIQLPDLENQRNFNELSRIVLEVRERV 377
Query: 218 PLRE-----EWGQGLGEQRSRMALPAGQTPPATAPS 248
+ E G+G G Q R + P+ P A APS
Sbjct: 378 RQEQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPS 413
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 35.0 bits (79), Expect = 0.19
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 35/108 (32%)
Query: 94 CRSSRPSARAW-------------ASRRRTLISSSCSSPTTSFRGDSFQ-RPPRARW--- 136
CRS+ PS++ W S R + SSS SS ++S R S PP RW
Sbjct: 1409 CRSASPSSQGWQGRRGRNSRSVSSGSNRTSEASSSSSSSSSSSRSRSRSLSPPHKRWRRS 1468
Query: 137 AWGVKPRSRR------------------SASAQEPRGDGPRGRSARRR 166
+ RSRR S+S R PR RS RRR
Sbjct: 1469 SCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRR 1516
>gi|239754772 PREDICTED: hypothetical protein [Homo sapiens]
Length = 95
Score = 34.7 bits (78), Expect = 0.25
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 129 QRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPG 174
+R PR R G + R+RR A Q PRG GP R+ RR P PG
Sbjct: 14 ERRPRQRQHRGRERRTRRDA--QGPRGGGPGFRAGGRRTPDKGRPG 57
>gi|239749310 PREDICTED: hypothetical protein XP_002346992 [Homo
sapiens]
Length = 95
Score = 34.7 bits (78), Expect = 0.25
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 129 QRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPG 174
+R PR R G + R+RR A Q PRG GP R+ RR P PG
Sbjct: 14 ERRPRQRQHRGRERRTRRDA--QGPRGGGPGFRAGGRRTPDKGRPG 57
>gi|239743404 PREDICTED: hypothetical protein XP_002342840 [Homo
sapiens]
Length = 95
Score = 34.7 bits (78), Expect = 0.25
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 129 QRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPG 174
+R PR R G + R+RR A Q PRG GP R+ RR P PG
Sbjct: 14 ERRPRQRQHRGRERRTRRDA--QGPRGGGPGFRAGGRRTPDKGRPG 57
>gi|239509103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 95
Score = 34.7 bits (78), Expect = 0.25
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 129 QRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPG 174
+R PR R G + R+RR A Q PRG GP R+ RR P PG
Sbjct: 14 ERRPRQRQHRGRERRTRRDA--QGPRGGGPGFRAGGRRTPDKGRPG 57
>gi|239744649 PREDICTED: hypothetical protein XP_002343213 [Homo
sapiens]
Length = 232
Score = 34.3 bits (77), Expect = 0.32
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 216 AVPLREEWGQGLGEQRS--RMALPAGQTPPATAPSVSVSRSLDCSSSVSRWDTKSSGRMR 273
AVP E WG GL Q+ R+A+P G++ PA A ++ SR +S S T+SSG
Sbjct: 82 AVP--EAWGAGLHAQQLPIRLAVP-GRSAPAVA--LACSRPFSTPTSCSPCPTRSSGVRS 136
Query: 274 KEFVGITLLLHDLASQKFPSGGPWSDGH 301
++ + + ++ + WS H
Sbjct: 137 STSTSLSSRVRAVKTKSSSTHSTWSSNH 164
>gi|17402900 far upstream element-binding protein [Homo sapiens]
Length = 644
Score = 33.9 bits (76), Expect = 0.42
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 12/94 (12%)
Query: 390 LEKVVAGIAGSAGPLLAGKTVGGRGTFGFVRTSWRVGEEGAPSVLTSYMKMSKTRVATGS 449
L V AG G GP GGRG G + +W +G G + KT + G
Sbjct: 343 LRSVQAGNPGGPGP-------GGRGR-GRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGK 394
Query: 450 GKVVRNSVRNQDEAYMDVWKLWERKPPKATAPSM 483
G S+ Q A +++ +R PP P+M
Sbjct: 395 GGETIKSISQQSGARIEL----QRNPPPNADPNM 424
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 33.9 bits (76), Expect = 0.42
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 67 QRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPTTSFRGD 126
+R+ L+ ++ S+ SSS++ SS S+ + +S + SSS SS ++S
Sbjct: 132 RRKLLKAGGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSST 191
Query: 127 SFQRPPRARWAWGVKP----RSRRSASAQEPRGDGPRGRSARRRP 167
SF +P + KP R +SA + R + + ++P
Sbjct: 192 SFSKPHKLMKEHKEKPSKDSREHKSAFKEPSRDHNKSSKESSKKP 236
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 33.9 bits (76), Expect = 0.42
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Query: 88 SSSTTRCRSSRPSARAWASRRRTLISSSCSSPTTSFRGDSFQRPPRARWAWGV---KPRS 144
S S T R +R+ +RR SSP T R D R R++ A + P
Sbjct: 381 SPSRTLSPGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTR 440
Query: 145 RRSASAQEPRGDGP--RGRSARRRPPGPHL--PGVRELLQLQFKLSRRGHR 191
RRS S R P R RS RRR P G R +L+ + RG R
Sbjct: 441 RRSRSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGR 491
>gi|239755873 PREDICTED: hypothetical protein [Homo sapiens]
Length = 577
Score = 33.5 bits (75), Expect = 0.55
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 216 AVPLREEWGQGLGEQR---SRMALPAGQTPPATAPSVSVSRSLDCSSSVSRWDTKSSGRM 272
AVP E WG GL Q+ S +A+P G++ PA A ++ SR +S S T+SSG
Sbjct: 82 AVP--EAWGAGLHAQQLPISGLAVP-GRSAPAVA--LACSRPFSTPTSCSPCPTRSSGVR 136
Query: 273 RKEFVGITLLLHDLASQKFPSGGPWSDGH 301
++ + + ++ + WS H
Sbjct: 137 SSTSTSLSSRVRAVKTKSSSTHSTWSSNH 165
>gi|239750345 PREDICTED: hypothetical protein XP_002347375 [Homo
sapiens]
Length = 233
Score = 33.5 bits (75), Expect = 0.55
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 216 AVPLREEWGQGLGEQR---SRMALPAGQTPPATAPSVSVSRSLDCSSSVSRWDTKSSGRM 272
AVP E WG GL Q+ S +A+P G++ PA A ++ SR +S S T+SSG
Sbjct: 82 AVP--EAWGAGLHAQQLPISGLAVP-GRSAPAVA--LACSRPFSTPTSCSPCPTRSSGVR 136
Query: 273 RKEFVGITLLLHDLASQKFPSGGPWSDGH 301
++ + + ++ + WS H
Sbjct: 137 SSTSTSLSSRVRAVKTKSSSTHSTWSSNH 165
>gi|116292174 fidgetin-like 2 [Homo sapiens]
Length = 653
Score = 33.5 bits (75), Expect = 0.55
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 16/176 (9%)
Query: 37 ALGLGLLAAAFAELRLQP-LVLCSQVLQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCR 95
A G LL AAFA R +P VL L+ LL R A + V + C+
Sbjct: 467 AEGARLLQAAFAAARCRPPSVLLISELEALLPARDDGAAAGGALQVPLLACLDGGCGAGA 526
Query: 96 --------SSRPSARAWASRRRTLISSSCSSPTTSFRGDSFQRPPRARWAWGVKPRSRRS 147
+SRP+A A+RRR + + P + RG QR A+ + R +
Sbjct: 527 DGVLVVGTTSRPAALDEATRRRFSLRFYVALPDSPARGQILQR-ALAQQGCALSER-ELA 584
Query: 148 ASAQEPRG--DGPRGRSARRRPPGPHLPGVRELL---QLQFKLSRRGHRLAFPHLE 198
A Q +G G G+ ++ G LPG++ L L+ L++ G R + L+
Sbjct: 585 ALVQGTQGFSGGELGQLCQQAAAGAGLPGLQRPLSYKDLEAALAKVGPRASAKELD 640
>gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo
sapiens]
Length = 738
Score = 32.7 bits (73), Expect = 0.95
Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 4/99 (4%)
Query: 94 CRSSRPSARAWASRRRTLISSSCSSPTT----SFRGDSFQRPPRARWAWGVKPRSRRSAS 149
CR P A L+ P + +F G R PRAR+ G +
Sbjct: 72 CRGGGPGASRGVLGLARLLGLWARGPGSCRCGAFAGPGAPRLPRARFPGGPAAAAWAGDE 131
Query: 150 AQEPRGDGPRGRSARRRPPGPHLPGVRELLQLQFKLSRR 188
A P G R RP LP R+LL L + RR
Sbjct: 132 AWRRGPAAPPGDKGRLRPAAAGLPEARKLLGLAYPERRR 170
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 32.7 bits (73), Expect = 0.95
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 83 VSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPTTSFRGDSFQRPPRARWAWG-VK 141
V TC ++ + CRS S A+R R + SP + QRPP A A G K
Sbjct: 2 VPTCGENAAS-CRSG--SHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPK 58
Query: 142 PRSRRSASA-----QEPRGDGPRGRSARRRPPGPHLPG 174
P SR + Q+P GP G + R P H+PG
Sbjct: 59 PVSRGPRAGLREWPQQPWRPGPLGAPLQDRAPSAHVPG 96
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 32.7 bits (73), Expect = 0.95
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 83 VSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPTTSFRGDSFQRPPRARWAWG-VK 141
V TC ++ + CRS S A+R R + SP + QRPP A A G K
Sbjct: 2 VPTCGENAAS-CRSG--SHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPK 58
Query: 142 PRSRRSASA-----QEPRGDGPRGRSARRRPPGPHLPG 174
P SR + Q+P GP G + R P H+PG
Sbjct: 59 PVSRGPRAGLREWPQQPWRPGPLGAPLQDRAPSAHVPG 96
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 32.7 bits (73), Expect = 0.95
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 83 VSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPTTSFRGDSFQRPPRARWAWG-VK 141
V TC ++ + CRS S A+R R + SP + QRPP A A G K
Sbjct: 2 VPTCGENAAS-CRSG--SHFPPAARGRLPGETLSPSPRAAALPPLQQRPPGAPGALGRPK 58
Query: 142 PRSRRSASA-----QEPRGDGPRGRSARRRPPGPHLPG 174
P SR + Q+P GP G + R P H+PG
Sbjct: 59 PVSRGPRAGLREWPQQPWRPGPLGAPLQDRAPSAHVPG 96
>gi|153251792 hypothetical protein LOC54854 [Homo sapiens]
Length = 478
Score = 32.3 bits (72), Expect = 1.2
Identities = 53/218 (24%), Positives = 78/218 (35%), Gaps = 50/218 (22%)
Query: 125 GDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLPGVRELLQLQFK 184
G S Q P R W V + AQ +PPG P ++EL++L+ +
Sbjct: 103 GQSEQPAPVLRLGWPVDSAWKGITRAQ-----------LYTQPPGEGQPPLKELVRLEIQ 151
Query: 185 LSRRGHRLAFPHLERLQLLLQLRH---------IVLVGQRAVPLREEWGQGLGEQRSRMA 235
+ + + LLL L +L+ ++ +P E Q LG
Sbjct: 152 AAHKLVAVVMDVFTDPDLLLDLVDAATRRWVPVYLLLDRQQLPAFLELAQQLG------- 204
Query: 236 LPAGQTPPATAPSVSVSRSLDCSSSVSRWDTKSSGRMRKEFVGITLLLHDLASQKFPSGG 295
P +V V CS SRW + SG +R++FV L ++ SG
Sbjct: 205 -----VNPWNTENVDVRVVRGCSFQ-SRWRRQVSGTVREKFV-------LLDGERVISGS 251
Query: 296 ---PWSDGHCHLDLKK-------DTWSLGCRMVLCAFC 323
WSD H L D +SL R + A C
Sbjct: 252 YSFTWSDARLHRGLVTLLTGEIVDAFSLEFRTLYAASC 289
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 32.0 bits (71), Expect = 1.6
Identities = 51/191 (26%), Positives = 63/191 (32%), Gaps = 41/191 (21%)
Query: 88 SSSTTRCRSSRPSARAWASRRRTLISSSCS-----SPTTSFRGDSFQRPPRARWAWGVKP 142
S +R R+ P A S R + CS SP S R FQ P P
Sbjct: 761 SPRASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPP--------FLP 812
Query: 143 RSRRSASAQEPRGDGPRGRSARRRPPGPHLPGV---------------RELLQLQFKLSR 187
+RR S QE PR + R PPG LPG R L L +L
Sbjct: 813 PARRPRSLQE--SPAPRRAAGRLGPPGSPLPGSPRPPSPPLGLCHSPRRSSLNLPSRLPH 870
Query: 188 RGHRLAFPHLERL--QLLLQLRHIVLVGQRAVPLREEWGQGLGEQRSRMALPAGQTPPAT 245
RL+ P + Q+ L G PL E R P P T
Sbjct: 871 TWRRLSEPPTRAVKPQVRLPFHRPPRAGAWRAPL---------EHRESPREPEDSETPWT 921
Query: 246 APSVSVSRSLD 256
P ++ S +D
Sbjct: 922 VPPLAPSWDVD 932
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 32.0 bits (71), Expect = 1.6
Identities = 51/173 (29%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 114 SSCSSPTTSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLP 173
SS P S + S PP G RSR +S + D PR PP P P
Sbjct: 22 SSLIHPARSNQPPSRTCPPLP----GPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPP 77
Query: 174 GVRELLQLQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREEWGQGLGEQRSR 233
+L + HRL+ H ++ VG + P R G+ G R R
Sbjct: 78 AAPHVLGARVAAGPT-HRLSASHS-------RVSSRGPVGTK--PKRPGQGRRAGA-RMR 126
Query: 234 MALPAG------------QTPPATAPSVSVSRSLDCSSSVSRWDT-KSSGRMR 273
A PA +PP PS + SRSL S+ SR D K+S R R
Sbjct: 127 SAAPASPRARAARAISNQSSPPPPPPSRARSRSLRLSAPGSRHDAEKASERNR 179
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 32.0 bits (71), Expect = 1.6
Identities = 51/173 (29%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 114 SSCSSPTTSFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPPGPHLP 173
SS P S + S PP G RSR +S + D PR PP P P
Sbjct: 22 SSLIHPARSNQPPSRTCPPLP----GPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPP 77
Query: 174 GVRELLQLQFKLSRRGHRLAFPHLERLQLLLQLRHIVLVGQRAVPLREEWGQGLGEQRSR 233
+L + HRL+ H ++ VG + P R G+ G R R
Sbjct: 78 AAPHVLGARVAAGPT-HRLSASHS-------RVSSRGPVGTK--PKRPGQGRRAGA-RMR 126
Query: 234 MALPAG------------QTPPATAPSVSVSRSLDCSSSVSRWDT-KSSGRMR 273
A PA +PP PS + SRSL S+ SR D K+S R R
Sbjct: 127 SAAPASPRARAARAISNQSSPPPPPPSRARSRSLRLSAPGSRHDAEKASERNR 179
>gi|110347412 latent transforming growth factor beta binding protein
4 isoform b [Homo sapiens]
Length = 1587
Score = 32.0 bits (71), Expect = 1.6
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Query: 62 LQLLLQRRALRLHAVQKVAVDVSTCVSSSTTRCRSSRPSARAWASRRRTLISSSCSSPTT 121
++ LL A R + A S VS + R RS +P A R + + SP+
Sbjct: 4 VKALLFVAAARARRLGGAAASESLAVSEAFCRVRSCQPKKCAGPQRCLNPVPA-VPSPSP 62
Query: 122 SFRGDSFQRPPRARWAWGVKPRSRRSASAQEPRGDGPRGRSARRRPP 168
S R +R W +R + PRG G RG RRRPP
Sbjct: 63 SVR----KRQVSLNWQPLTLQEARALLKRRRPRGPGGRG-LLRRRPP 104
>gi|56243533 stromal cell-derived factor 2-like 1 precursor [Homo
sapiens]
Length = 221
Score = 32.0 bits (71), Expect = 1.6
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 26 LWGRGRGGLHLALGLGLLAAAF-----AELRLQPLVLCSQVLQLLLQRRALRLHA 75
+W GRGG + LGLL A A LV C VL+LL +RLH+
Sbjct: 1 MWSAGRGGAAWPVLLGLLLALLVPGGGAAKTGAELVTCGSVLKLLNTHHRVRLHS 55
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,592,479
Number of Sequences: 37866
Number of extensions: 1406151
Number of successful extensions: 6360
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 6220
Number of HSP's gapped (non-prelim): 165
length of query: 583
length of database: 18,247,518
effective HSP length: 108
effective length of query: 475
effective length of database: 14,157,990
effective search space: 6725045250
effective search space used: 6725045250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.