Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 119395727
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119395727 cardiac calsequestrin 2 precursor [Homo sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119395727 cardiac calsequestrin 2 precursor [Homo sapiens] 809 0.0
gi|227430327 calsequestrin 1 [Homo sapiens] 548 e-156
gi|4758304 protein disulfide isomerase A4 [Homo sapiens] 62 1e-09
gi|52487191 thioredoxin domain containing 4 (endoplasmic reticul... 58 2e-08
gi|20070125 prolyl 4-hydroxylase, beta subunit precursor [Homo s... 52 1e-06
gi|42740903 MTERF domain containing 2 [Homo sapiens] 48 2e-05
gi|55956788 nucleolin [Homo sapiens] 48 2e-05
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 47 3e-05
gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens] 47 4e-05
gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens] 47 4e-05
gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens] 47 4e-05
gi|38505222 thioredoxin domain containing 10 [Homo sapiens] 46 7e-05
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 44 2e-04
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 44 3e-04
gi|115529449 upstream binding transcription factor, RNA polymera... 44 3e-04
gi|115529451 upstream binding transcription factor, RNA polymera... 44 3e-04
gi|7657671 upstream binding transcription factor, RNA polymerase... 44 3e-04
gi|18093112 ABT1-associated protein [Homo sapiens] 44 3e-04
gi|4757900 calreticulin precursor [Homo sapiens] 44 3e-04
gi|51477718 TATA box binding protein-associated factor, RNA poly... 44 3e-04
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens] 43 4e-04
gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens] 43 4e-04
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens] 43 4e-04
gi|91598939 secreted phosphoprotein 1 isoform c [Homo sapiens] 43 4e-04
gi|91206462 secreted phosphoprotein 1 isoform a [Homo sapiens] 42 7e-04
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 42 7e-04
gi|19924161 RPB5-mediating protein isoform b [Homo sapiens] 42 7e-04
gi|19924159 RPB5-mediating protein isoform a [Homo sapiens] 42 7e-04
gi|21735415 centromere protein B [Homo sapiens] 42 0.001
gi|16445033 ACRC protein [Homo sapiens] 42 0.001
>gi|119395727 cardiac calsequestrin 2 precursor [Homo sapiens]
Length = 399
Score = 809 bits (2089), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MKRTHLFIVGIYFLSSCRAEEGLNFPTYDGKDRVVSLSEKNFKQVLKKYDLLCLYYHEPV 60
MKRTHLFIVGIYFLSSCRAEEGLNFPTYDGKDRVVSLSEKNFKQVLKKYDLLCLYYHEPV
Sbjct: 1 MKRTHLFIVGIYFLSSCRAEEGLNFPTYDGKDRVVSLSEKNFKQVLKKYDLLCLYYHEPV 60
Query: 61 SSDKVTQKQFQLKEIVLELVAQVLEHKAIGFVMVDAKKEAKLAKKLGFDEEGSLYILKGD 120
SSDKVTQKQFQLKEIVLELVAQVLEHKAIGFVMVDAKKEAKLAKKLGFDEEGSLYILKGD
Sbjct: 61 SSDKVTQKQFQLKEIVLELVAQVLEHKAIGFVMVDAKKEAKLAKKLGFDEEGSLYILKGD 120
Query: 121 RTIEFDGEFAADVLVEFLLDLIEDPVEIISSKLEVQAFERIEDYIKLIGFFKSEDSEYYK 180
RTIEFDGEFAADVLVEFLLDLIEDPVEIISSKLEVQAFERIEDYIKLIGFFKSEDSEYYK
Sbjct: 121 RTIEFDGEFAADVLVEFLLDLIEDPVEIISSKLEVQAFERIEDYIKLIGFFKSEDSEYYK 180
Query: 181 AFEEAAEHFQPYIKFFATFDKGVAKKLSLKMNEVDFYEPFMDEPIAIPNKPYTEEELVEF 240
AFEEAAEHFQPYIKFFATFDKGVAKKLSLKMNEVDFYEPFMDEPIAIPNKPYTEEELVEF
Sbjct: 181 AFEEAAEHFQPYIKFFATFDKGVAKKLSLKMNEVDFYEPFMDEPIAIPNKPYTEEELVEF 240
Query: 241 VKEHQRPTLRRLRPEEMFETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPD 300
VKEHQRPTLRRLRPEEMFETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPD
Sbjct: 241 VKEHQRPTLRRLRPEEMFETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPD 300
Query: 301 LSILWIDPDDFPLLVAYWEKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELED 360
LSILWIDPDDFPLLVAYWEKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELED
Sbjct: 301 LSILWIDPDDFPLLVAYWEKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELED 360
Query: 361 WIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
WIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE
Sbjct: 361 WIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
>gi|227430327 calsequestrin 1 [Homo sapiens]
Length = 396
Score = 548 bits (1412), Expect = e-156
Identities = 251/367 (68%), Positives = 316/367 (86%)
Query: 15 SSCRAEEGLNFPTYDGKDRVVSLSEKNFKQVLKKYDLLCLYYHEPVSSDKVTQKQFQLKE 74
S + +EGL+FP YDG DRV++++ KN+K V KKY++L L YHEP DK +Q+QF+++E
Sbjct: 30 SGVQGQEGLDFPEYDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEE 89
Query: 75 IVLELVAQVLEHKAIGFVMVDAKKEAKLAKKLGFDEEGSLYILKGDRTIEFDGEFAADVL 134
++LEL AQVLE K +GF +VD++K+A +AKKLG E S+Y+ KGD IE+DGEF+AD +
Sbjct: 90 LILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEVDSMYVFKGDEVIEYDGEFSADTI 149
Query: 135 VEFLLDLIEDPVEIISSKLEVQAFERIEDYIKLIGFFKSEDSEYYKAFEEAAEHFQPYIK 194
VEFLLD++EDPVE+I + E+QAFE IED IKLIG+FKS+DSE+YKAFE+AAE F PYI
Sbjct: 150 VEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKSKDSEHYKAFEDAAEEFHPYIP 209
Query: 195 FFATFDKGVAKKLSLKMNEVDFYEPFMDEPIAIPNKPYTEEELVEFVKEHQRPTLRRLRP 254
FFATFD VAKKL+LK+NE+DFYE FM+EP+ IP+KP +EEE+V FV+EH+R TLR+L+P
Sbjct: 210 FFATFDSKVAKKLTLKLNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKP 269
Query: 255 EEMFETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPDLSILWIDPDDFPLL 314
E M+ETWEDD++GIHIVAFAE++DPDG+EFLE LK VA+DNT+NPDLSI+WIDPDDFPLL
Sbjct: 270 ESMYETWEDDMDGIHIVAFAEEADPDGFEFLETLKAVAQDNTENPDLSIIWIDPDDFPLL 329
Query: 315 VAYWEKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTED 374
V YWEKTF IDL PQIGVVNVTDADSVWME+ D++DLP+AEELEDW+EDVL G+INTED
Sbjct: 330 VPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTED 389
Query: 375 DDEDDDD 381
DD+DDDD
Sbjct: 390 DDDDDDD 396
>gi|4758304 protein disulfide isomerase A4 [Homo sapiens]
Length = 645
Score = 61.6 bits (148), Expect = 1e-09
Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 37 LSEKNFKQVLKKYDLLCLYYHEPVSSD-KVTQKQFQLKEIVLELVAQVLEHKA--IGFVM 93
L+++NF +V+ D++ + ++ P K ++ E A+ L ++ I
Sbjct: 182 LTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEY-------EKAAKELSKRSPPIPLAK 234
Query: 94 VDAKKEAKLAKKLGFDEEGSLYILKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIISSKL 153
VDA E LAK+ +L I + R +++G +V+++++ P + I +
Sbjct: 235 VDATAETDLAKRFDVSGYPTLKIFRKGRPYDYNGPREKYGIVDYMIEQSGPPSKEILTLK 294
Query: 154 EVQAFERIEDYIKLIGFFKSEDSEYYKAFEEAAEHFQPYIKFFATFDKGVAKKLSLKMNE 213
+VQ F + D + +IG FK E Y+ +++AA + + KF TF +AK L + +
Sbjct: 295 QVQEFLKDGDDVIIIGVFKGESDPAYQQYQDAANNLREDYKFHHTFSTEIAKFLKVSQGQ 354
Query: 214 VDFYEP 219
+ +P
Sbjct: 355 LVVMQP 360
Score = 37.0 bits (84), Expect = 0.031
Identities = 60/281 (21%), Positives = 115/281 (40%), Gaps = 31/281 (11%)
Query: 34 VVSLSEKNFKQVLKKYDLLCLYYHEPVSSDKVTQKQFQLKEIVLELVAQVLEHK--AIGF 91
V+ L++ NF + D + L ++ P KQF + E +A +L+ K I
Sbjct: 64 VLVLNDANFDNFVADKDTVLLEFYAPWCGHC---KQFAPE---YEKIANILKDKDPPIPV 117
Query: 92 VMVDAKKEAKLAKKLGFDEEGSLYILKGDRTIEFDGEFAADVLVEFLLDLIE---DPVEI 148
+DA + LA + ++ ILK + ++++G + +V + ++ + P
Sbjct: 118 AKIDATSASVLASRFDVSGYPTIKILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPE 177
Query: 149 ISSKLEVQAFER---------IEDYIKLIGFFKSEDSEYYKAFEEAAEHFQ--PYIKFFA 197
++ L + F+ +E Y G K EY KA +E ++ P K A
Sbjct: 178 VTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDA 237
Query: 198 TFDKGVAKKLSLKMNEVDFYEPFMDEPIAIP---NKPYTEEELVEFVKEHQRPTLRR-LR 253
T + +AK+ +V Y P N P + +V+++ E P + L
Sbjct: 238 TAETDLAKRF-----DVSGYPTLKIFRKGRPYDYNGPREKYGIVDYMIEQSGPPSKEILT 292
Query: 254 PEEMFETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARD 294
+++ E +D + I I F +SDP ++ + + D
Sbjct: 293 LKQVQEFLKDGDDVIIIGVFKGESDPAYQQYQDAANNLRED 333
Score = 29.6 bits (65), Expect = 5.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E DED + +N+ E++ ++ ++DDDE
Sbjct: 25 EGPDEDSSNRENAIEDEEEEEEEDDDE 51
>gi|52487191 thioredoxin domain containing 4 (endoplasmic reticulum)
[Homo sapiens]
Length = 406
Score = 57.8 bits (138), Expect = 2e-08
Identities = 73/363 (20%), Positives = 150/363 (41%), Gaps = 21/363 (5%)
Query: 34 VVSLSEKNFKQVLKKYDL-LCLYYHEPVSSDKVTQKQFQLKEIVLELVAQVLEHKAIGFV 92
+ SL +N ++L D+ L +Y + ++ F+ V++ + + F
Sbjct: 31 ITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIK--EEFPNENQVVFA 88
Query: 93 MVDAKKEAKLAKKLGFDEEGSLYILKGDRTI--EFDGEFAADVLVEFLLDLIEDPVEIIS 150
VD + + +A++ + +L + + + E+ G+ + L +++ DP++ I
Sbjct: 89 RVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIR 148
Query: 151 SKLEVQAFERIEDYIKLIGFFKSEDSEYYKAFEEAAEHFQPYIKFFATFDKGVAKKLSLK 210
E+ +R + I IG+F+ +DS+ Y+ FE A F + F V+K
Sbjct: 149 DLAEITTLDRSKRNI--IGYFEQKDSDNYRVFERVANILHDDCAFLSAFG-DVSKPERYS 205
Query: 211 MNEVDFYEPFMDEPIAIPNKPYTEEELV-EFVKEHQRPTLRRLRPEEMFETWEDDLNGIH 269
+ + + P P + T ++ ++++ P +R + E E E+ L
Sbjct: 206 GDNIIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGLP--F 263
Query: 270 IVAFAEKSDPDGYEFLEILKQVARD-NTDNPDLSILWIDPDDFPLLVAYWEKTFKIDLFR 328
++ F K D + E + +VAR ++ ++ L D D F + + +KT
Sbjct: 264 LILFHMKEDTESLEIFQ--NEVARQLISEKGTINFLHADCDKFRHPLLHIQKT------- 314
Query: 329 PQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEE 388
P V D+ D D+ +L+ ++ D+ SGK++ E D D E+
Sbjct: 315 PADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQ 374
Query: 389 DND 391
D
Sbjct: 375 AQD 377
>gi|20070125 prolyl 4-hydroxylase, beta subunit precursor [Homo
sapiens]
Length = 508
Score = 51.6 bits (122), Expect = 1e-06
Identities = 86/370 (23%), Positives = 145/370 (39%), Gaps = 39/370 (10%)
Query: 31 KDRVVSLSEKNFKQVLKKYDLLCLYYHEPVSSDKVTQKQFQLKEIVLELVAQVLEHKAIG 90
+D V+ L + NF + L + L + ++ P K + E + KA G
Sbjct: 23 EDHVLVLRKSNFAEALAAHKYLLVEFYAPWCG--------HCKALAPEYAKAAGKLKAEG 74
Query: 91 ----FVMVDAKKEAKLAKKLGFDEEGSLYILKGDRTI---EFDGEFAADVLVEFLLDLIE 143
VDA +E+ LA++ G ++ + T E+ AD +V +L
Sbjct: 75 SEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTG 134
Query: 144 DPVEIISSKLEVQAFERIEDYIKLIGFFKSEDSEYYKAFEEAAEHFQPYIKFFATFDKGV 203
+ ++ + + +IGFFK +S+ K F +AAE I F T + V
Sbjct: 135 PAATTLPDGAAAESLVESSE-VAVIGFFKDVESDSAKQFLQAAEAIDD-IPFGITSNSDV 192
Query: 204 AKKLSLKMNEVDFYEPFMDEPIAIPNKPYTEEELVEFVKEHQRPTLRRLRPEEMFETWED 263
K L + V ++ F DE T+E L++F+K +Q P + + + +
Sbjct: 193 FSKYQLDKDGVVLFKKF-DEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGG 251
Query: 264 DLNGIHIVAFAEKSDPDGYEFLEILKQVAR-------------DNTDNPD-LSILWIDPD 309
++ HI+ F KS D L K A D+TDN L + +
Sbjct: 252 EIK-THILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKE 310
Query: 310 DFPL--LVAYWEKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIED--- 364
+ P L+ E+ K ++ +T+ ++E L + E EDW +
Sbjct: 311 ECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVK 370
Query: 365 VLSGKINTED 374
VL GK N ED
Sbjct: 371 VLVGK-NFED 379
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 47.8 bits (112), Expect = 2e-05
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 355 AEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
A E E+ K + D+DEDDDD++++DE+DND+ DDD+D+
Sbjct: 321 AREEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDD 365
Score = 46.6 bits (109), Expect = 4e-05
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
Query: 349 DDDLPTAEELEDWIEDVLSGKINTEDD-DEDDDDDDNSDEEDNDDSDDDDDE 399
DD + +E ED ++ + N EDD DEDDDD+D+ + EDND+ +DDD+E
Sbjct: 333 DDKRASLDEDEDDDDE----EDNDEDDNDEDDDDEDDDEAEDNDEDEDDDEE 380
Score = 42.0 bits (97), Expect = 0.001
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 356 EELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
EE E D ++ ++DD+D++D+D D +++DD +DDD+
Sbjct: 325 EESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDE 367
Score = 30.0 bits (66), Expect = 3.8
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDE--DDDDDDNSDEED 389
D+DD ++ ED ED + EDDDE D+D+D++ DEE+
Sbjct: 342 DEDD----DDEEDNDEDDNDEDDDDEDDDEAEDNDEDEDDDEEE 381
Score = 29.3 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDD 383
E DDDD +E ++ +D ED+DED+DDD+
Sbjct: 341 EDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDEDEDDDE 379
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 47.8 bits (112), Expect = 2e-05
Identities = 17/27 (62%), Positives = 25/27 (92%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E+DDED+DDDD+ D+ED+DD DD+++E
Sbjct: 239 EEDDEDEDDDDDEDDEDDDDEDDEEEE 265
Score = 46.2 bits (108), Expect = 5e-05
Identities = 16/27 (59%), Positives = 25/27 (92%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
ED++EDD+D+D+ D+ED++D DD+DDE
Sbjct: 236 EDEEEDDEDEDDDDDEDDEDDDDEDDE 262
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Query: 348 DDDDLPTAEELEDWIEDV------------LSGKINTEDDDEDDDDDDNSDEEDNDDSDD 395
DDDD + E+ +E + K ED+DE++DD+D D++D DD DD
Sbjct: 197 DDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDD 256
Query: 396 DDDE 399
DD++
Sbjct: 257 DDED 260
Score = 44.3 bits (103), Expect = 2e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
D++D +E ED IE ED+DD+D+ D+ED+DD ++DD E
Sbjct: 156 DEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSE 207
Score = 43.9 bits (102), Expect = 3e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
ED DE++DDD DEED++D D+D+DE
Sbjct: 143 EDSDEEEDDDSEEDEEDDEDEDEDEDE 169
Score = 43.5 bits (101), Expect = 3e-04
Identities = 15/37 (40%), Positives = 28/37 (75%)
Query: 363 EDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
++V + EDD+++DDDDD DE+D+D+ D++++E
Sbjct: 230 KNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEE 266
Score = 42.7 bits (99), Expect = 6e-04
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 338 DADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDD 397
D DS E D+D+ +E+E + +ED+D++DD+D DE+D+DD +DD
Sbjct: 150 DDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDED---DEDDDDDEEDDS 206
Query: 398 DE 399
+E
Sbjct: 207 EE 208
Score = 40.4 bits (93), Expect = 0.003
Identities = 13/29 (44%), Positives = 24/29 (82%)
Query: 371 NTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
N + +D D+++DD+S+E++ DD D+D+DE
Sbjct: 139 NAKKEDSDEEEDDDSEEDEEDDEDEDEDE 167
Score = 40.0 bits (92), Expect = 0.004
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 17/61 (27%)
Query: 356 EELEDWIEDVLSGKINTEDDDEDDDDD-----------------DNSDEEDNDDSDDDDD 398
+E D ED S + +D+DED+D+D D DE+D DD DDDDD
Sbjct: 142 KEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDD 201
Query: 399 E 399
E
Sbjct: 202 E 202
Score = 40.0 bits (92), Expect = 0.004
Identities = 12/27 (44%), Positives = 24/27 (88%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDDD+D+DD+D+ DE+D ++ +++++E
Sbjct: 245 EDDDDDEDDEDDDDEDDEEEEEEEEEE 271
Score = 39.3 bits (90), Expect = 0.006
Identities = 11/27 (40%), Positives = 24/27 (88%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
++D++DDDD+D+ D++D DD +++++E
Sbjct: 242 DEDEDDDDDEDDEDDDDEDDEEEEEEE 268
Score = 38.9 bits (89), Expect = 0.008
Identities = 11/27 (40%), Positives = 24/27 (88%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
ED+D+DDD+DD D++++D+ +++++E
Sbjct: 243 EDEDDDDDEDDEDDDDEDDEEEEEEEE 269
Score = 38.1 bits (87), Expect = 0.014
Identities = 12/37 (32%), Positives = 29/37 (78%)
Query: 363 EDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
ED + + ++DD+DD+DD++ D+ED+++ +++++E
Sbjct: 234 EDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEE 270
Score = 35.0 bits (79), Expect = 0.12
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 357 ELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSD 394
E ED ED + ++DDEDDDD+D+ +EE+ ++ +
Sbjct: 234 EDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEE 271
Score = 34.7 bits (78), Expect = 0.16
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 346 IPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDD 392
+ +D+D +E ED +D EDD++DDD+DD +EE+ ++
Sbjct: 232 VAEDEDEEEDDEDEDDDDD--------EDDEDDDDEDDEEEEEEEEE 270
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 47.0 bits (110), Expect = 3e-05
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 331 IGVVNVTDADSVWM-------EIPDDDDLPTAEELEDWIEDVLSGKINT-EDDDEDDDDD 382
+GV N T+ ++ M +I D+ T + E +E G+ EDD ED+DD+
Sbjct: 205 LGVFNETEESNLNMYTRGKQKDIQRTDE-ETTDNQEGSVESSEEGEDQEHEDDGEDEDDE 263
Query: 383 DNSDEEDNDDSDDDDDE 399
D+ D++D+DD DDD+D+
Sbjct: 264 DDDDDDDDDDDDDDEDD 280
Score = 47.0 bits (110), Expect = 3e-05
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 349 DDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
+ + ++EE ED + + EDDD+DDDDDD+ D+ED++D +D ++E
Sbjct: 239 EGSVESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEE 289
Score = 40.8 bits (94), Expect = 0.002
Identities = 13/27 (48%), Positives = 23/27 (85%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
+DDD+DDDDDD+ D+ED +D ++++ +
Sbjct: 266 DDDDDDDDDDDDEDDEDEEDGEEENQK 292
Score = 29.6 bits (65), Expect = 5.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEED 389
+D + E ED +D + +DDDEDD+D+++ +EE+
Sbjct: 249 EDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEEN 290
>gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 46.6 bits (109), Expect = 4e-05
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 319 EKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDED 378
E+ K D++ + V D D DDDD +E E+ +ED+ G ED+ E+
Sbjct: 228 EEVIKDDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGD---EDEGEE 284
Query: 379 DDDDDNSDEEDNDDSDDD 396
D+DDD +E + D+ +DD
Sbjct: 285 DEDDDEGEEGEEDEGEDD 302
Score = 42.4 bits (98), Expect = 7e-04
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 340 DSVWME------IPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393
D +W +PD DD E+ +D +D G+ ED DE D+D+ DE+D++
Sbjct: 233 DDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDEDEGEEDEDDDEGE 292
Query: 394 DDDDDE 399
+ ++DE
Sbjct: 293 EGEEDE 298
>gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 46.6 bits (109), Expect = 4e-05
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 319 EKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDED 378
E+ K D++ + V D D DDDD +E E+ +ED+ G ED+ E+
Sbjct: 228 EEVIKDDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGD---EDEGEE 284
Query: 379 DDDDDNSDEEDNDDSDDD 396
D+DDD +E + D+ +DD
Sbjct: 285 DEDDDEGEEGEEDEGEDD 302
Score = 42.4 bits (98), Expect = 7e-04
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 340 DSVWME------IPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393
D +W +PD DD E+ +D +D G+ ED DE D+D+ DE+D++
Sbjct: 233 DDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDEDEGEEDEDDDEGE 292
Query: 394 DDDDDE 399
+ ++DE
Sbjct: 293 EGEEDE 298
>gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 46.6 bits (109), Expect = 4e-05
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 319 EKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDED 378
E+ K D++ + V D D DDDD +E E+ +ED+ G ED+ E+
Sbjct: 228 EEVIKDDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGD---EDEGEE 284
Query: 379 DDDDDNSDEEDNDDSDDD 396
D+DDD +E + D+ +DD
Sbjct: 285 DEDDDEGEEGEEDEGEDD 302
Score = 42.4 bits (98), Expect = 7e-04
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 340 DSVWME------IPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393
D +W +PD DD E+ +D +D G+ ED DE D+D+ DE+D++
Sbjct: 233 DDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDEDEGEEDEDDDEGE 292
Query: 394 DDDDDE 399
+ ++DE
Sbjct: 293 EGEEDE 298
>gi|38505222 thioredoxin domain containing 10 [Homo sapiens]
Length = 454
Score = 45.8 bits (107), Expect = 7e-05
Identities = 58/299 (19%), Positives = 125/299 (41%), Gaps = 22/299 (7%)
Query: 84 LEHKAIGFVM----VDAKKEAKLAKKLGFDEEGSLYILKGDRTIEFDGEFAADVLVEFLL 139
LE K+IG + +DA + +A + G ++ +LKGD + G D ++EF
Sbjct: 68 LEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAH 127
Query: 140 DLIEDPVEIISSKLEVQAFERIEDYIKLIGFFKSEDSEYYKAFEEAAEHFQPYIKFFATF 199
+ + + S+ Q FE ++ ++ + +S + + +AA Y FF+
Sbjct: 128 RVSGALIRPLPSQ---QMFEHMQKRHRVFFVYVGGESPLKEKYIDAASELIVYTYFFSAS 184
Query: 200 DKGVAKKLSLKMNEVDFYEPFMDEPIAIPNKPYTEEELVEFVKEHQRPTLRRLRPEEMFE 259
++ V + ++LK E+ F DE + ++ Y + +L ++ + + ++E
Sbjct: 185 EEVVPEYVTLK--EMPAVLVFKDETYFVYDE-YEDGDLSSWINRERFQNYLAMDGFLLYE 241
Query: 260 TWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTD--NPDLSILWIDPDDFPLLVAY 317
+ V + + + I+++VARD D + D +D +D Y
Sbjct: 242 LGDTGKLVALAVIDEKNTSVEHTRLKSIIQEVARDYRDLFHRDFQFGHMDGND------Y 295
Query: 318 WEKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDD 376
+L P + V+N ++ + D + E++ +I ++L G + + D
Sbjct: 296 INTLLMDELTVPTVVVLNTSNQQYFLL----DRQIKNVEDMVQFINNILDGTVEAQGGD 350
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 44.3 bits (103), Expect = 2e-04
Identities = 15/27 (55%), Positives = 23/27 (85%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDDD+D+DDDD DEE+ ++ ++DDD+
Sbjct: 140 EDDDDDEDDDDEEDEEEEEEEEEDDDD 166
Score = 43.9 bits (102), Expect = 3e-04
Identities = 15/26 (57%), Positives = 23/26 (88%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDD 398
+DDDEDDDD+++ +EE+ ++ DDDDD
Sbjct: 142 DDDDEDDDDEEDEEEEEEEEEDDDDD 167
Score = 41.6 bits (96), Expect = 0.001
Identities = 13/27 (48%), Positives = 23/27 (85%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
+DDD++DDDD+ +EE+ ++ +DDDD+
Sbjct: 141 DDDDDEDDDDEEDEEEEEEEEEDDDDD 167
Score = 40.8 bits (94), Expect = 0.002
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 369 KINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
K + +DD++DDD++D +EE+ ++ DDDD E
Sbjct: 139 KEDDDDDEDDDDEEDEEEEEEEEEDDDDDTE 169
Score = 37.4 bits (85), Expect = 0.024
Identities = 11/27 (40%), Positives = 22/27 (81%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
+D+D+DD++D+ +EE+ +D DDD ++
Sbjct: 144 DDEDDDDEEDEEEEEEEEEDDDDDTED 170
Score = 36.2 bits (82), Expect = 0.054
Identities = 12/26 (46%), Positives = 21/26 (80%)
Query: 374 DDDEDDDDDDNSDEEDNDDSDDDDDE 399
D E+DD +D+ D+ED+DD +D+++E
Sbjct: 132 DGGEEDDKEDDDDDEDDDDEEDEEEE 157
Score = 36.2 bits (82), Expect = 0.054
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 363 EDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDD 397
ED + EDDD+++D+++ +EE++DD D +D
Sbjct: 136 EDDKEDDDDDEDDDDEEDEEEEEEEEEDDDDDTED 170
Score = 34.3 bits (77), Expect = 0.20
Identities = 10/27 (37%), Positives = 23/27 (85%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
+DD+ED+++++ +E+D+DD++D D+
Sbjct: 148 DDDEEDEEEEEEEEEDDDDDTEDFADQ 174
Score = 33.1 bits (74), Expect = 0.45
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
DDDD ++ ED E E+++E+DDDDD D D ++ D D
Sbjct: 141 DDDDDEDDDDEEDEEE---------EEEEEEDDDDDTEDFADQENLPDPQD 182
Score = 31.6 bits (70), Expect = 1.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E + ++DD D++D++D DD++DE
Sbjct: 128 EPGGDGGEEDDKEDDDDDEDDDDEEDE 154
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 43.9 bits (102), Expect = 3e-04
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 359 EDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDD 397
ED E++ + EDD+++DDD+D+ DE+D++D DD+D
Sbjct: 1676 EDEEEELELPEEEAEDDEDEDDDEDDDDEDDDEDDDDED 1714
Score = 43.9 bits (102), Expect = 3e-04
Identities = 15/25 (60%), Positives = 23/25 (92%)
Query: 374 DDDEDDDDDDNSDEEDNDDSDDDDD 398
+DDED+DDD++ D+ED+D+ DDD+D
Sbjct: 1690 EDDEDEDDDEDDDDEDDDEDDDDED 1714
Score = 42.0 bits (97), Expect = 0.001
Identities = 14/27 (51%), Positives = 23/27 (85%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E+ ++D+D+DD+ D++D DD +DDDDE
Sbjct: 1687 EEAEDDEDEDDDEDDDDEDDDEDDDDE 1713
Score = 40.4 bits (93), Expect = 0.003
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 329 PQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEE 388
P+ G A + ++++L EE + ED EDDDEDDDD+D+ +++
Sbjct: 1659 PREGAAAAAAAAGESSQEDEEEELELPEEEAEDDED--------EDDDEDDDDEDDDEDD 1710
Query: 389 DNDDSDDDDDE 399
D++D D +E
Sbjct: 1711 DDEDLRTDSEE 1721
Score = 31.2 bits (69), Expect = 1.7
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 9/50 (18%)
Query: 344 MEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393
+E+P+++ AE+ ED +D + +D+D+D+DDDD D+++S
Sbjct: 1682 LELPEEE----AEDDEDEDDDE-----DDDDEDDDEDDDDEDLRTDSEES 1722
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 348 DDDDLPTAEELEDWIEDVL-SGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
D+D+ +E D ED S + ++ED+ ED D+++ DE+++DD DDD+DE
Sbjct: 652 DEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 704
Score = 42.4 bits (98), Expect = 7e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 366 LSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
L K +E+DDE+D+DD++ DEE+ DD + D E
Sbjct: 634 LQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSE 667
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E DD+D EE ++ + G ++E ED+ +D + +EED++D DDD+D+
Sbjct: 646 EDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDD 700
Score = 38.9 bits (89), Expect = 0.008
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
E DD++ ++E+ D E + D++E+DD+D++ DE+D++D D++ +
Sbjct: 656 EEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 709
Score = 37.4 bits (85), Expect = 0.024
Identities = 12/27 (44%), Positives = 22/27 (81%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDD+ED+DD+D +EE++D++ D ++
Sbjct: 642 EDDEEDEDDEDEDEEEEDDENGDSSED 668
Score = 35.4 bits (80), Expect = 0.092
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 16/53 (30%)
Query: 359 EDWIEDVLSGKINTEDDDEDDDDDDNSDEEDN-------------DDSDDDDD 398
ED ED G N EDD+++DDD+D+ ++EDN D SD D +
Sbjct: 678 EDESED---GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 33.1 bits (74), Expect = 0.45
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E +D+ +E E+ ED EDDDEDDD+D++++ E + S +
Sbjct: 674 ESSSEDESEDGDENEEDDED--------EDDDEDDDEDEDNESEGSSSSSSSSGD 720
Score = 31.6 bits (70), Expect = 1.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 23/69 (33%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDD--------------DDDDNSDEEDN 390
E +DD+ +E ED E EDD+ D D+ ++ DE +
Sbjct: 639 ESEEDDEEDEDDEDEDEEE---------EDDENGDSSEDGGDSSESSSEDESEDGDENEE 689
Query: 391 DDSDDDDDE 399
DD D+DDDE
Sbjct: 690 DDEDEDDDE 698
Score = 30.8 bits (68), Expect = 2.3
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDD 397
D + + +E ED E+ + +D+D+D+D+D+ S+ + S D
Sbjct: 671 DSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 720
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 348 DDDDLPTAEELEDWIEDVL-SGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
D+D+ +E D ED S + ++ED+ ED D+++ DE+++DD DDD+DE
Sbjct: 652 DEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 704
Score = 42.4 bits (98), Expect = 7e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 366 LSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
L K +E+DDE+D+DD++ DEE+ DD + D E
Sbjct: 634 LQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSE 667
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E DD+D EE ++ + G ++E ED+ +D + +EED++D DDD+D+
Sbjct: 646 EDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDD 700
Score = 38.9 bits (89), Expect = 0.008
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
E DD++ ++E+ D E + D++E+DD+D++ DE+D++D D++ +
Sbjct: 656 EEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 709
Score = 37.4 bits (85), Expect = 0.024
Identities = 12/27 (44%), Positives = 22/27 (81%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDD+ED+DD+D +EE++D++ D ++
Sbjct: 642 EDDEEDEDDEDEDEEEEDDENGDSSED 668
Score = 35.4 bits (80), Expect = 0.092
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 16/53 (30%)
Query: 359 EDWIEDVLSGKINTEDDDEDDDDDDNSDEEDN-------------DDSDDDDD 398
ED ED G N EDD+++DDD+D+ ++EDN D SD D +
Sbjct: 678 EDESED---GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 33.1 bits (74), Expect = 0.45
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E +D+ +E E+ ED EDDDEDDD+D++++ E + S +
Sbjct: 674 ESSSEDESEDGDENEEDDED--------EDDDEDDDEDEDNESEGSSSSSSSSGD 720
Score = 31.6 bits (70), Expect = 1.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 23/69 (33%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDD--------------DDDDNSDEEDN 390
E +DD+ +E ED E EDD+ D D+ ++ DE +
Sbjct: 639 ESEEDDEEDEDDEDEDEEE---------EDDENGDSSEDGGDSSESSSEDESEDGDENEE 689
Query: 391 DDSDDDDDE 399
DD D+DDDE
Sbjct: 690 DDEDEDDDE 698
Score = 30.8 bits (68), Expect = 2.3
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDD 397
D + + +E ED E+ + +D+D+D+D+D+ S+ + S D
Sbjct: 671 DSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 720
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 348 DDDDLPTAEELEDWIEDVL-SGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
D+D+ +E D ED S + ++ED+ ED D+++ DE+++DD DDD+DE
Sbjct: 689 DEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 741
Score = 42.4 bits (98), Expect = 7e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 366 LSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
L K +E+DDE+D+DD++ DEE+ DD + D E
Sbjct: 671 LQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSE 704
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E DD+D EE ++ + G ++E ED+ +D + +EED++D DDD+D+
Sbjct: 683 EDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDD 737
Score = 38.9 bits (89), Expect = 0.008
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
E DD++ ++E+ D E + D++E+DD+D++ DE+D++D D++ +
Sbjct: 693 EEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 746
Score = 37.4 bits (85), Expect = 0.024
Identities = 12/27 (44%), Positives = 22/27 (81%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDD+ED+DD+D +EE++D++ D ++
Sbjct: 679 EDDEEDEDDEDEDEEEEDDENGDSSED 705
Score = 35.4 bits (80), Expect = 0.092
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 16/53 (30%)
Query: 359 EDWIEDVLSGKINTEDDDEDDDDDDNSDEEDN-------------DDSDDDDD 398
ED ED G N EDD+++DDD+D+ ++EDN D SD D +
Sbjct: 715 EDESED---GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
Score = 33.1 bits (74), Expect = 0.45
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
E +D+ +E E+ ED EDDDEDDD+D++++ E + S +
Sbjct: 711 ESSSEDESEDGDENEEDDED--------EDDDEDDDEDEDNESEGSSSSSSSSGD 757
Score = 31.6 bits (70), Expect = 1.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 23/69 (33%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDD--------------DDDDNSDEEDN 390
E +DD+ +E ED E EDD+ D D+ ++ DE +
Sbjct: 676 ESEEDDEEDEDDEDEDEEE---------EDDENGDSSEDGGDSSESSSEDESEDGDENEE 726
Query: 391 DDSDDDDDE 399
DD D+DDDE
Sbjct: 727 DDEDEDDDE 735
Score = 30.8 bits (68), Expect = 2.3
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDD 397
D + + +E ED E+ + +D+D+D+D+D+ S+ + S D
Sbjct: 708 DSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 757
>gi|18093112 ABT1-associated protein [Homo sapiens]
Length = 851
Score = 43.9 bits (102), Expect = 3e-04
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 319 EKTFKIDLFRPQIGVVNVTDADSVWMEIPDDD-----DLPTAEELEDWIEDVLSGKINTE 373
+ ++ + R G N TD + + ++D ++ + EE E+ I V G+ + +
Sbjct: 211 QSVVQLIMTRDSDGYENSTDGEMCDKDALEEDSESVSEIGSDEESENEITSV--GRASGD 268
Query: 374 DDDEDDDDDDNSDEEDNDDSDDDDDE 399
DD +DD++++ DEE+++D D +DD+
Sbjct: 269 DDGSEDDEEEDEDEEEDEDEDSEDDD 294
>gi|4757900 calreticulin precursor [Homo sapiens]
Length = 417
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 42/170 (24%)
Query: 259 ETWEDDLNGIHIVAFAEKSDPDGYEFLEILKQVARDNTDNPDLSILWIDPD-------DF 311
E W+++++G + +P + E + DNPD WI P+
Sbjct: 251 EDWDEEMDG--------EWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPD 302
Query: 312 PLLVAYWE-KTFKIDLFRPQIGVV---------------------NVTDADSVWMEIPDD 349
P + AY +DL++ + G + VT A M+ D
Sbjct: 303 PSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQD 362
Query: 350 DDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
++ EE ED K E +D++DD+D + DEED +D ++D++E
Sbjct: 363 EEQRLKEEEED-----KKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 407
>gi|51477718 TATA box binding protein-associated factor, RNA
polymerase II, Q [Homo sapiens]
Length = 462
Score = 43.5 bits (101), Expect = 3e-04
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 360 DWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
D + ++ S + DDDED+DD+D ++ED D+ +D ++E
Sbjct: 319 DMLREMFSDSRSNNDDDEDEDDEDEDEDEDEDEDEDKEEE 358
Score = 40.0 bits (92), Expect = 0.004
Identities = 14/46 (30%), Positives = 31/46 (67%)
Query: 354 TAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
T+ E + E + N +DD+++DD+D++ DE++++D D +++E
Sbjct: 314 TSSEYDMLREMFSDSRSNNDDDEDEDDEDEDEDEDEDEDEDKEEEE 359
Score = 38.9 bits (89), Expect = 0.008
Identities = 12/29 (41%), Positives = 23/29 (79%)
Query: 371 NTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
N +D+DEDD+D+D ++ED D+ ++++E
Sbjct: 332 NDDDEDEDDEDEDEDEDEDEDEDKEEEEE 360
Score = 38.1 bits (87), Expect = 0.014
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 358 LEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
L + D S + ED+D++D+D+D ++ED D ++++D
Sbjct: 321 LREMFSDSRSNNDDDEDEDDEDEDEDEDEDEDEDKEEEEED 361
Score = 33.9 bits (76), Expect = 0.27
Identities = 10/27 (37%), Positives = 21/27 (77%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDD+++D+D+D ++ED ++ ++D E
Sbjct: 338 EDDEDEDEDEDEDEDEDKEEEEEDCSE 364
Score = 33.1 bits (74), Expect = 0.45
Identities = 10/27 (37%), Positives = 21/27 (77%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
+D+DED+D+D++ DE+ ++ +D +E
Sbjct: 339 DDEDEDEDEDEDEDEDKEEEEEDCSEE 365
>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
Length = 259
Score = 43.1 bits (100), Expect = 4e-04
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 369 KINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
K+ D++DDDDD+ D+ED+DD D DD+E
Sbjct: 155 KVKLAADEDDDDDDEEDDDEDDDDDDFDDEE 185
Score = 40.8 bits (94), Expect = 0.002
Identities = 13/31 (41%), Positives = 26/31 (83%)
Query: 369 KINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
K+ ++DD+DDD++D+ +++D+DD DD++ E
Sbjct: 157 KLAADEDDDDDDEEDDDEDDDDDDFDDEEAE 187
Score = 38.9 bits (89), Expect = 0.008
Identities = 13/27 (48%), Positives = 23/27 (85%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDDD+DD++DD+ D++D+D D++ +E
Sbjct: 162 EDDDDDDEEDDDEDDDDDDFDDEEAEE 188
>gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens]
Length = 265
Score = 43.1 bits (100), Expect = 4e-04
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 369 KINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
K+ D++DDDDD+ D+ED+DD D DD+E
Sbjct: 155 KVKLAADEDDDDDDEEDDDEDDDDDDFDDEE 185
Score = 40.8 bits (94), Expect = 0.002
Identities = 13/31 (41%), Positives = 26/31 (83%)
Query: 369 KINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
K+ ++DD+DDD++D+ +++D+DD DD++ E
Sbjct: 157 KLAADEDDDDDDEEDDDEDDDDDDFDDEEAE 187
Score = 38.9 bits (89), Expect = 0.008
Identities = 13/27 (48%), Positives = 23/27 (85%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDDD+DD++DD+ D++D+D D++ +E
Sbjct: 162 EDDDDDDEEDDDEDDDDDDFDDEEAEE 188
>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
Length = 294
Score = 43.1 bits (100), Expect = 4e-04
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 369 KINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
K+ D++DDDDD+ D+ED+DD D DD+E
Sbjct: 155 KVKLAADEDDDDDDEEDDDEDDDDDDFDDEE 185
Score = 40.8 bits (94), Expect = 0.002
Identities = 13/31 (41%), Positives = 26/31 (83%)
Query: 369 KINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
K+ ++DD+DDD++D+ +++D+DD DD++ E
Sbjct: 157 KLAADEDDDDDDEEDDDEDDDDDDFDDEEAE 187
Score = 38.9 bits (89), Expect = 0.008
Identities = 13/27 (48%), Positives = 23/27 (85%)
Query: 373 EDDDEDDDDDDNSDEEDNDDSDDDDDE 399
EDDD+DD++DD+ D++D+D D++ +E
Sbjct: 162 EDDDDDDEEDDDEDDDDDDFDDEEAEE 188
>gi|91598939 secreted phosphoprotein 1 isoform c [Homo sapiens]
Length = 287
Score = 43.1 bits (100), Expect = 4e-04
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 334 VNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTE----DDDEDDDDDDNSDEED 389
+ V ADS E + + ++EE D+ ++ L K N DD +D+DDDD+ D +D
Sbjct: 17 IPVKQADSGSSE--EKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQD 74
Query: 390 NDDSDDDDD 398
+ DS+D DD
Sbjct: 75 SIDSNDSDD 83
Score = 30.4 bits (67), Expect = 2.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDD 396
++ D+DD +D ++ S N DD +D DD SDE + D D+
Sbjct: 60 DMDDEDD-------DDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDE 104
Score = 30.4 bits (67), Expect = 2.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 344 MEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
M+ DDDD +++ I++ D D+ DD DD+ +++ SD+ D+
Sbjct: 61 MDDEDDDDHVDSQD-----------SIDSNDSDDVDDTDDSHQSDESHHSDESDE 104
>gi|91206462 secreted phosphoprotein 1 isoform a [Homo sapiens]
Length = 314
Score = 42.4 bits (98), Expect = 7e-04
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 354 TAEELEDWIEDVLSGKINTE----DDDEDDDDDDNSDEEDNDDSDDDDD 398
++EE D+ ++ L K N DD +D+DDDD+ D +D+ DS+D DD
Sbjct: 62 SSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDD 110
Score = 40.0 bits (92), Expect = 0.004
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 20/100 (20%)
Query: 299 PDLSILWIDPDDFPLLVAYWEKTFKIDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEEL 358
PD W++PD + K +L PQ V + D +P + E
Sbjct: 37 PDAVATWLNPDP----------SQKQNLLAPQNAVSSEETNDFKQETLPSKSN-----ES 81
Query: 359 EDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
D ++D+ + EDDD+ D D+ D D+DD DD DD
Sbjct: 82 HDHMDDM-----DDEDDDDHVDSQDSIDSNDSDDVDDTDD 116
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 42.4 bits (98), Expect = 7e-04
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 330 QIGVVNVTDADSVWMEIPDDDDLPTAEELEDWI-EDVLSGKINTEDDDEDDDDDDNSDEE 388
Q + DS+ + P+D++ T EE ED + E+++ED++DD DE
Sbjct: 2392 QASTLQANREDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEG 2451
Query: 389 DNDDSDDDDD 398
+ D DDDDD
Sbjct: 2452 EEGDEDDDDD 2461
Score = 38.1 bits (87), Expect = 0.014
Identities = 15/65 (23%), Positives = 37/65 (56%)
Query: 335 NVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSD 394
N++ A ++ D ++ E+ E+ ++ S N ++DD D++++ ++E++D D
Sbjct: 2389 NLSQASTLQANREDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQED 2448
Query: 395 DDDDE 399
D+ +E
Sbjct: 2449 DEGEE 2453
Score = 36.2 bits (82), Expect = 0.054
Identities = 16/66 (24%), Positives = 37/66 (56%)
Query: 334 VNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393
+N+ D + ++D + E+ +D ++ + + EDD EDD+ ++ +++D+D S
Sbjct: 2404 MNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGS 2463
Query: 394 DDDDDE 399
+ + DE
Sbjct: 2464 EMELDE 2469
Score = 33.5 bits (75), Expect = 0.35
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSD 394
D+DD EE E+ E+ E+ DEDDDDD + E D D D
Sbjct: 2427 DEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDEDYPD 2473
Score = 30.0 bits (66), Expect = 3.8
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 324 IDLFRPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDD 383
+++ P+ + + DS +DD EE E+ ED E D+ DDDDD
Sbjct: 2404 MNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDE--DDDDD 2461
Query: 384 NSDEEDNDDSDD 395
S+ E ++D D
Sbjct: 2462 GSEMELDEDYPD 2473
>gi|19924161 RPB5-mediating protein isoform b [Homo sapiens]
Length = 495
Score = 42.4 bits (98), Expect = 7e-04
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 347 PDDDDLPTAEELEDWIEDVLSGKINTE-----DDDEDDDDDDNSDEEDNDDSDDDDD 398
P D+ ++E + L+ +N DDD+DDDDDD+ D D+DD D+D +
Sbjct: 227 PCHKDVASSEPFSGQVNSQLNCSVNGSSSYHSDDDDDDDDDDDDDNIDDDDGDNDHE 283
Score = 40.0 bits (92), Expect = 0.004
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 353 PTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
P + ++ + ++G + DD+DDDDDD+ D+ +DD D+D E
Sbjct: 237 PFSGQVNSQLNCSVNGSSSYHSDDDDDDDDDDDDDNIDDDDGDNDHE 283
>gi|19924159 RPB5-mediating protein isoform a [Homo sapiens]
Length = 535
Score = 42.4 bits (98), Expect = 7e-04
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 347 PDDDDLPTAEELEDWIEDVLSGKINTE-----DDDEDDDDDDNSDEEDNDDSDDDDD 398
P D+ ++E + L+ +N DDD+DDDDDD+ D D+DD D+D +
Sbjct: 267 PCHKDVASSEPFSGQVNSQLNCSVNGSSSYHSDDDDDDDDDDDDDNIDDDDGDNDHE 323
Score = 40.0 bits (92), Expect = 0.004
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 353 PTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
P + ++ + ++G + DD+DDDDDD+ D+ +DD D+D E
Sbjct: 277 PFSGQVNSQLNCSVNGSSSYHSDDDDDDDDDDDDDNIDDDDGDNDHE 323
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 20/82 (24%)
Query: 338 DADSVWMEIPDDDDLPTAEELEDWIEDVLS--GKINT------------------EDDDE 377
D DS E D++ E EDW + V+ G ED D
Sbjct: 453 DVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDS 512
Query: 378 DDDDDDNSDEEDNDDSDDDDDE 399
D +++D+ +E+D D+ DDDD+E
Sbjct: 513 DSEEEDDEEEDDEDEDDDDDEE 534
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 42.0 bits (97), Expect = 0.001
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 338 DADSVWMEIPDD--DDLPTAEELEDWIE--DVLSGKINTEDDDEDDDDDDNSDEEDNDDS 393
D +S E PDD DD ++ D E D S + DD+ DD DDNSD+ +D+S
Sbjct: 150 DDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNS 209
Query: 394 DDDD 397
DD D
Sbjct: 210 DDSD 213
Score = 39.3 bits (90), Expect = 0.006
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 338 DADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDD--DDNSDEEDNDDSDD 395
D +S ++PDD+ ++++ D D S + DD DD D DD+SD+ D D
Sbjct: 180 DDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSS 239
Query: 396 DDDE 399
DD E
Sbjct: 240 DDSE 243
Score = 36.2 bits (82), Expect = 0.054
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 344 MEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSD--EEDNDDSDDDDD 398
+E+PDD+ +E +D +D + N++D + DD+ D+S+ ++++DDSD DD
Sbjct: 136 LEVPDDNS-DDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDD 191
Score = 35.8 bits (81), Expect = 0.070
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDD---DDDNSDEEDNDDSDDDDD 398
DD D+P + + + D S + DD DD DD + D E DDS DD +
Sbjct: 210 DDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSE 263
Score = 35.0 bits (79), Expect = 0.12
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 335 NVTDADSVWMEIPDD--DDLPTAEELEDWIE--DVLSGKINTEDDDEDDD---DDDNSDE 387
+V D S E PDD DD ++ D E D S DD DD DD + D
Sbjct: 233 DVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDS 292
Query: 388 EDNDDSDDDDD 398
E +DDS DD +
Sbjct: 293 EASDDSSDDSE 303
Score = 34.3 bits (77), Expect = 0.20
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 338 DADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDD---DDNSDEED-NDDS 393
D +S E PDD+ +E +D +D N++D +D+ D DDNSD+ D DD
Sbjct: 160 DDNSDDSEAPDDNS-DDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDK 218
Query: 394 DDDDD 398
DD D
Sbjct: 219 SDDSD 223
Score = 34.3 bits (77), Expect = 0.20
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSD--EEDNDDSDDDDD 398
E PDD +E +D +D + +++D + DD D+SD E+ +DDSD DD
Sbjct: 273 EAPDDSS-DDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDD 327
Score = 33.1 bits (74), Expect = 0.45
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 335 NVTDADSVWMEIPDD--DDLPTAEELEDWIE--DVLSGKINTEDDDEDDDDDDNSDEEDN 390
+V D S ++PDD DD ++ D E D S DD DD + + +D+
Sbjct: 223 DVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDS 282
Query: 391 DDSDDDDDE 399
+ SDD D+
Sbjct: 283 EASDDSSDD 291
Score = 32.7 bits (73), Expect = 0.59
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 345 EIPDD--DDLPTAEELEDWIE--DVLSGKINTEDDDEDD---DDDDNSDEEDNDDSDDDD 397
E PDD DD ++ D E D S DD DD DD + D E DD DD
Sbjct: 253 EAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDS 312
Query: 398 D 398
D
Sbjct: 313 D 313
Score = 32.3 bits (72), Expect = 0.78
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 18/71 (25%)
Query: 344 MEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDD-------DDNSDE-----EDND 391
+EI DD+ P ++ I++ I DDD DDD+ DDNSD+ +++D
Sbjct: 98 LEINSDDESPECCHVKPAIQEP---PIVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSD 154
Query: 392 DS---DDDDDE 399
DS DD+ D+
Sbjct: 155 DSEAPDDNSDD 165
Score = 32.3 bits (72), Expect = 0.78
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDD--DDNSDEED--NDDSDDDD 397
DD+D +LE + D S DD+ DD + DDNSD+ + +D+SDD +
Sbjct: 126 DDNDDDNGNDLE--VPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSE 177
Score = 32.0 bits (71), Expect = 1.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDDE 399
DD D+P + + D S DD DD + + +D++ DD D+
Sbjct: 220 DDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDD 271
Score = 31.2 bits (69), Expect = 1.7
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 337 TDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDD 396
+D V + DD D+P + D S DD DD + + +D++ DD
Sbjct: 219 SDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDS 278
Query: 397 DDE 399
D+
Sbjct: 279 SDD 281
Score = 30.8 bits (68), Expect = 2.3
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 348 DDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSD--EEDNDDS---DDDDDE 399
DDD+ E +D +D + N++D + DD+ D+S+ ++++DDS DD+ D+
Sbjct: 129 DDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDD 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.139 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,362,765
Number of Sequences: 37866
Number of extensions: 737642
Number of successful extensions: 13147
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 6624
Number of HSP's gapped (non-prelim): 3052
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.