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Search of human proteins with 239756888
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756888 PREDICTED: hypothetical protein [Homo sapiens]
(248 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756888 PREDICTED: hypothetical protein [Homo sapiens] 498 e-141
gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo ... 422 e-118
gi|239745891 PREDICTED: hypothetical protein XP_002343610 [Homo ... 422 e-118
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.002
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 39 0.003
gi|163965366 nascent polypeptide-associated complex alpha subuni... 38 0.007
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 38 0.007
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 37 0.012
gi|55956910 meningioma 1 [Homo sapiens] 37 0.021
gi|50511941 EMI domain containing 1 [Homo sapiens] 36 0.027
gi|87252717 hypothetical protein LOC284618 [Homo sapiens] 36 0.027
gi|112421108 capicua homolog [Homo sapiens] 36 0.036
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 35 0.046
gi|151101311 proteome of centriole 5 isoform 1 [Homo sapiens] 35 0.061
gi|151101301 proteome of centriole 5 isoform 2 [Homo sapiens] 35 0.061
gi|17402900 far upstream element-binding protein [Homo sapiens] 35 0.061
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 35 0.061
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 35 0.079
gi|239509062 PREDICTED: hypothetical protein [Homo sapiens] 35 0.079
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 35 0.079
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 35 0.079
gi|126352608 elastin isoform e precursor [Homo sapiens] 34 0.10
gi|126352446 elastin isoform d precursor [Homo sapiens] 34 0.10
gi|126352322 elastin isoform c precursor [Homo sapiens] 34 0.10
gi|126352700 elastin isoform b precursor [Homo sapiens] 34 0.10
gi|126352440 elastin isoform a precursor [Homo sapiens] 34 0.10
gi|239754746 PREDICTED: hypothetical protein [Homo sapiens] 34 0.10
gi|239749281 PREDICTED: hypothetical protein XP_002346979 [Homo ... 34 0.10
gi|153792074 proline rich 12 [Homo sapiens] 34 0.10
gi|18079216 CASK interacting protein 1 [Homo sapiens] 34 0.14
>gi|239756888 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 498 bits (1283), Expect = e-141
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPG 60
MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPG
Sbjct: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPG 60
Query: 61 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 120
PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR
Sbjct: 61 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 120
Query: 121 GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG 180
GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG
Sbjct: 121 GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG 180
Query: 181 VGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDVLEVLECLDGVEVLAALVGHPLGAR 240
VGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDVLEVLECLDGVEVLAALVGHPLGAR
Sbjct: 181 VGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDVLEVLECLDGVEVLAALVGHPLGAR 240
Query: 241 LEQVVQQC 248
LEQVVQQC
Sbjct: 241 LEQVVQQC 248
>gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo
sapiens]
Length = 455
Score = 422 bits (1084), Expect = e-118
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 37 LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ 96
LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ
Sbjct: 244 LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ 303
Query: 97 LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA 156
LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA
Sbjct: 304 LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA 363
Query: 157 AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV 216
AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV
Sbjct: 364 AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV 423
Query: 217 LEVLECLDGVEVLAALVGHPLGARLEQVVQQC 248
LEVLECLDGVEVLAALVGHPLGARLEQVVQQC
Sbjct: 424 LEVLECLDGVEVLAALVGHPLGARLEQVVQQC 455
Score = 79.3 bits (194), Expect = 3e-15
Identities = 37/49 (75%), Positives = 38/49 (77%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCT 49
MEPRGAPTGPPARPSAGEPVRIWFSVGLP SPAPNG + G T
Sbjct: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALT 49
>gi|239745891 PREDICTED: hypothetical protein XP_002343610 [Homo
sapiens]
Length = 455
Score = 422 bits (1084), Expect = e-118
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 37 LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ 96
LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ
Sbjct: 244 LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ 303
Query: 97 LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA 156
LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA
Sbjct: 304 LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA 363
Query: 157 AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV 216
AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV
Sbjct: 364 AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV 423
Query: 217 LEVLECLDGVEVLAALVGHPLGARLEQVVQQC 248
LEVLECLDGVEVLAALVGHPLGARLEQVVQQC
Sbjct: 424 LEVLECLDGVEVLAALVGHPLGARLEQVVQQC 455
Score = 79.3 bits (194), Expect = 3e-15
Identities = 37/49 (75%), Positives = 38/49 (77%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCT 49
MEPRGAPTGPPARPSAGEPVRIWFSVGLP SPAPNG + G T
Sbjct: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALT 49
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 39.7 bits (91), Expect = 0.002
Identities = 53/192 (27%), Positives = 61/192 (31%), Gaps = 35/192 (18%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPGPH 62
P GA PA P+ G P G P P G + P GG PGP
Sbjct: 67 PAGAAGAGPAAPAEGAP-------GAAPEPPPAGRARP-----------GGGGPQRPGP- 107
Query: 63 LLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGP 122
S PAG A L P S P A+ + P + GP
Sbjct: 108 -------PSPRRPLVPAGPAPPAAKLRPPPEGSAGSC---APVPAAAAVAAGPEPAPAGP 157
Query: 123 AAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCH------ALL 176
A A P L + AGP P G PG AQ +A L H L
Sbjct: 158 AKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSL 217
Query: 177 GLEGVGSLLPQP 188
G +LLP P
Sbjct: 218 VNNGPAALLPLP 229
Score = 35.4 bits (80), Expect = 0.046
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 109 ASPSLPPHGSWR-GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLP 163
A+P++PP + + G +A A P P + GPA V G G PGAA +A+ P
Sbjct: 293 AAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG-PGAAAAAPAPGVKAESP 347
Score = 33.5 bits (75), Expect = 0.18
Identities = 52/199 (26%), Positives = 65/199 (32%), Gaps = 17/199 (8%)
Query: 3 PRGAPTGPPARPSAGE--PVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTI------GHG- 53
P A PP SAG PV +V PAP G + P GP + G G
Sbjct: 121 PPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPA----GPAALAARAGPGPGP 176
Query: 54 GAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSL 113
G PGP + A ++ + A + PA + L+P A+P
Sbjct: 177 GPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGT 236
Query: 114 ----PPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADA 169
PP P A A P P + A AP P A LA P A A
Sbjct: 237 VIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA 296
Query: 170 LQCHALLGLEGVGSLLPQP 188
+ A G P P
Sbjct: 297 VPPPAAAQNGGSAGAAPAP 315
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 39.3 bits (90), Expect = 0.003
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 25 SVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHY 84
S+GLP++ + G +P HGP + GA T P PHL K + GSP+ +
Sbjct: 1207 SLGLPIAASSEGHRLP---GHGPLSSSAPGASTQPPPHLPTKLVIRHGGAGGSPSVTWAR 1263
Query: 85 LLVLLPAQAQSQLQLQVL--VPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVV 141
L + + S L G M S + PP ++ + + L + EAG + VV
Sbjct: 1264 ASSSLSSSSSSSSAASSLDADEDGPMPSRNRPPIKTYEARSRIGLKLKIKQEAGLSKVV 1322
Score = 31.2 bits (69), Expect = 0.88
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 76 GSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEA 135
GSP G+ L L P Q Q + + P + + +P G A + P+ L S A
Sbjct: 220 GSPGGATAATLGLAPIQVVGQPVMALNTPTSQLLAKQVPVSGYLASAAGPSEPVTLAS-A 278
Query: 136 GPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEGVGSLLPQPLLI 191
G +P GA +V+ + A T N +++ A G+ QPL +
Sbjct: 279 GVSP-------QGAGLVIQKNLSAAVATTLNGNSVFGGAGAASAPTGTPSGQPLAV 327
Score = 29.3 bits (64), Expect = 3.3
Identities = 28/82 (34%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 59 PGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPH-G 117
P PHL SST S S+ LPA S QLQ G SP+ PP
Sbjct: 875 PAPHL-------PPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLH 927
Query: 118 SWRGPAAAAVPLPLTSEAGPAP 139
PAA P P T + P
Sbjct: 928 LVPEPAAPPPPPPRTFQMVTTP 949
Score = 27.7 bits (60), Expect = 9.7
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 139 PVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQ 194
P GG G GA AVAA L + D LLGL+G ++L L+ Q
Sbjct: 136 PADGGAGPTGAGGAAAVAAGPQALFPGSTD------LLGLQGPPTVLTHQALVPPQ 185
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 38.1 bits (87), Expect = 0.007
Identities = 39/150 (26%), Positives = 51/150 (34%), Gaps = 31/150 (20%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGL-----SVPLMVDHGPCTIGHGGAIT 57
P+GAPT P A P + + G P +P P G + P + G T H GA
Sbjct: 1237 PKGAPTTPAATPPSPK--------GGPATPPPKGAPTPPAATPPSLKGGLATPPHKGA-- 1286
Query: 58 LPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHG 117
P P ++ +T P G+ P A P SP PP
Sbjct: 1287 -PNPAVVTPPSPKGGPATSPPKGAP------TPPAA---------TPPSPKGSPGTPPPK 1330
Query: 118 SWRGPAAAAVPLPLTSEAGPAPVVGGRGAP 147
P A P P + PA +G P
Sbjct: 1331 GAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Score = 35.4 bits (80), Expect = 0.046
Identities = 46/163 (28%), Positives = 58/163 (35%), Gaps = 28/163 (17%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPN-----GLSVPLMVDHGPCTIGHGGAIT 57
P+GAPT P A P + + G P +P+P + P GP T GA
Sbjct: 936 PKGAPTPPAATPPSPK--------GGPATPSPKWAPTPPAATPPSPKGGPATPSPKGA-- 985
Query: 58 LPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHG 117
P P +T SP G+ V P+ S P G P+ P
Sbjct: 986 -PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP--FPKGASTPPAATPPS 1042
Query: 118 SWRGPAAAAVP--LPLTSEA-------GPA-PVVGGRGAPGAA 150
PAA +P P T A GPA P + G P AA
Sbjct: 1043 PKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAA 1085
Score = 32.3 bits (72), Expect = 0.39
Identities = 41/145 (28%), Positives = 55/145 (37%), Gaps = 25/145 (17%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPGPH 62
P+GAPT P A P + + GL P + P P G + P P
Sbjct: 1145 PKGAPTTPAATPPSPKG-------GLATPPPKGAPTTPAATPPSP-----KGGLATPSP- 1191
Query: 63 LLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGP 122
+ A +++ SP G L P A + P G +A+PS P G+ P
Sbjct: 1192 --KGAPTTPAATPPSPKGG---LATPSPKGAPTTPAATPPSPKGGLATPS--PKGAPTTP 1244
Query: 123 AAAAVPLPLTSEAGPAPVVGGRGAP 147
AA P P A P P +GAP
Sbjct: 1245 AATP-PSPKGGPATPPP----KGAP 1264
Score = 28.1 bits (61), Expect = 7.4
Identities = 40/162 (24%), Positives = 54/162 (33%), Gaps = 25/162 (15%)
Query: 3 PRGAPTGPPARPSA-----GEPVRIWFSVGLPVSPAPNGLSV--------PLMVDHGPCT 49
P+G PT PP PS+ P + +G V A GL ++V P +
Sbjct: 1633 PKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPES 1692
Query: 50 IGHGGAITLPGPHLLQKAQ------KDSSSSTGSPAG-SAHYLLVLLPAQAQSQLQLQVL 102
A T GP + + D S+ GS S LLP Q S +
Sbjct: 1693 TPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGK 1752
Query: 103 VPWGCMASPSLPPHGSWRGPAAAA-----VPLPLTSEAGPAP 139
P PP P AA +P P ++ AP
Sbjct: 1753 DASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAP 1794
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 38.1 bits (87), Expect = 0.007
Identities = 64/213 (30%), Positives = 83/213 (38%), Gaps = 34/213 (15%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSP-APNGLSVPLMVDHGPCTIGHGGAITLP 59
+E RG T +RP A PV FS+ P P P+ LS+ + GP G+ L
Sbjct: 376 LEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPGPS--HSDGSFNLL 433
Query: 60 G--PHLLQKAQKDSSSSTGSPAGSAHYLLVLLP------------AQAQSQLQLQVLVPW 105
G HL + S+GSP H + LP A A +VP
Sbjct: 434 GSDAHL----PPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVPS 489
Query: 106 GCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAP------VVGGRGAPGAAVVLAVAAAE 159
+ SPS G GPA PL EA P P + G G PG L + +
Sbjct: 490 PVLQSPS-EGLGMGAGPACPLPPL-AGGEAFPFPSPEQGLALSGAGFPGMLGALPLPLSL 547
Query: 160 AQLPTANADALQCHALLGL--EGVGSLLPQPLL 190
Q P + L H+L G+ G G P+PLL
Sbjct: 548 GQPPPS---PLLNHSLFGVLTGGGGQPPPEPLL 577
Score = 28.5 bits (62), Expect = 5.7
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 108 MASPSLPPHGSWR---GPAA------AAVPLPLT-SEAGPAPVVGGRGAPG-AAVVLAVA 156
+ P LPP + GPA+ A + LPL G AP V G GAP A L A
Sbjct: 267 LTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPGAPPFLASSLLSA 326
Query: 157 AAEAQLP 163
AA+AQ P
Sbjct: 327 AAKAQHP 333
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 37.4 bits (85), Expect = 0.012
Identities = 37/137 (27%), Positives = 50/137 (36%), Gaps = 25/137 (18%)
Query: 10 PPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQK 69
PP + SA P I + P P +G ++P G +
Sbjct: 86 PPQQLSAATPHGINDILSRPSMPVASGAALPSASPSG-------------------SSSS 126
Query: 70 DSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAV-- 127
SSS++ S A +A A A S L +P SP PP G + P+AAAV
Sbjct: 127 SSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAA 186
Query: 128 ----PLPLTSEAGPAPV 140
P PL G P+
Sbjct: 187 VGRYPKPLAELPGRTPI 203
Score = 28.5 bits (62), Expect = 5.7
Identities = 35/132 (26%), Positives = 48/132 (36%), Gaps = 22/132 (16%)
Query: 67 AQKDSSSSTGSPAGSAHYLLVLLP-------AQAQSQLQLQVLVPWGC---MASPSLPPH 116
+ SSSS+ SP H L P + QL P G ++ PS+P
Sbjct: 51 SSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMP-- 108
Query: 117 GSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALL 176
A+ LP S +G + + +A A AAA A ++ L L
Sbjct: 109 ------VASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGL----LA 158
Query: 177 GLEGVGSLLPQP 188
GL SL P P
Sbjct: 159 GLPRFSSLSPPP 170
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 36.6 bits (83), Expect = 0.021
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 5 GAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPGPHLL 64
G+P PP AGE G P GL + P + G GG PG L
Sbjct: 1080 GSPKLPPRGVGAGEH-------GPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGL 1132
Query: 65 QKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQ 100
++ + +SSS P H L +L QAQ QLQ Q
Sbjct: 1133 EQVRTPTSSSGAPPPDEIHPLEIL---QAQIQLQRQ 1165
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 36.2 bits (82), Expect = 0.027
Identities = 37/137 (27%), Positives = 51/137 (37%), Gaps = 5/137 (3%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLPVSP---APNGLSVPLMVDHGPCTIGHGGAITLP 59
P+G PTGPP P P G+P SP P G + P + P G G P
Sbjct: 291 PQG-PTGPPGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLRGEP 349
Query: 60 GPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSW 119
GP Q+ G P +H+ L + ++ + ++ M P GS
Sbjct: 350 GPQ-GSAGQRGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPELGSG 408
Query: 120 RGPAAAAVPLPLTSEAG 136
GPA P L + G
Sbjct: 409 AGPAGTGTPSLLRGKRG 425
>gi|87252717 hypothetical protein LOC284618 [Homo sapiens]
Length = 236
Score = 36.2 bits (82), Expect = 0.027
Identities = 36/129 (27%), Positives = 46/129 (35%), Gaps = 15/129 (11%)
Query: 12 ARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITL---PGPHLLQKAQ 68
A S P + S GL +P+P G +V H + H ++L P P +
Sbjct: 92 AAVSLSTPHLLAASAGLQPAPSPLGTAVCPFSPHSSPSFSHHRTLSLFISPAPLSCPAPR 151
Query: 69 KDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVP 128
ST P G A VLL + L PW C P PP G+ G A
Sbjct: 152 AQVHRST--PMGRALLTRVLL----------EPLRPWACPRLPRSPPGGAQSGRGGALAQ 199
Query: 129 LPLTSEAGP 137
L A P
Sbjct: 200 PTLRCAAAP 208
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 35.8 bits (81), Expect = 0.036
Identities = 48/161 (29%), Positives = 58/161 (36%), Gaps = 37/161 (22%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPGPH 62
P+ P P+ G P PAP S+ + G T G A T P P
Sbjct: 833 PQQLQVAPAPAPAPGT------KAAAPSGPAPT-TSIRFTLPPGTSTNGKVLAATAPTPG 885
Query: 63 L--LQ--------KAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPS 112
+ LQ KAQ S P GSA LLP + VLVP +A+PS
Sbjct: 886 IPILQSVPSAPPPKAQSVSPVQAPPPGGSAQ----LLPGK--------VLVP---LAAPS 930
Query: 113 LPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVL 153
+ G G PLPL S PV G P + L
Sbjct: 931 MSVRGGGAGQ-----PLPLVSPPFSVPVQNGAQPPSKIIQL 966
Score = 30.8 bits (68), Expect = 1.1
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 20/172 (11%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPG 60
+ P +P PPA + G PV F G SPAP + P ++ + A +
Sbjct: 1072 VSPVPSPQLPPACAAPGGPVITAFYSG---SPAPTSSAPLAQPSQAPPSLVYTVATSTTP 1128
Query: 61 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 120
P + + +T +PA ++ + P+ + ++ P SP P +
Sbjct: 1129 PAATILPKGPPAPATATPAPTSPF-----PSATAGSMTYSLVAPKAQRPSPKAP-----Q 1178
Query: 121 GPAAAAVPLPLTS-EAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQ 171
AA +P+ S EAG + G PG A + + PTA L+
Sbjct: 1179 KVKAAIASIPVGSFEAGAS------GRPGPAPRQPLEPGPVREPTAPESELE 1224
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 35.4 bits (80), Expect = 0.046
Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 106 GCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVV-----GGRGA--PGAAVVLAVAAA 158
G A+PS PP GS GP P P + A APV R A PG+A A A A
Sbjct: 16 GAPAAPSPPPRGSRAGPVVVVAPGPPVTTATSAPVTLVAPGEARPAWVPGSAETSAPAPA 75
Query: 159 EAQLP 163
A P
Sbjct: 76 PAPAP 80
>gi|151101311 proteome of centriole 5 isoform 1 [Homo sapiens]
Length = 575
Score = 35.0 bits (79), Expect = 0.061
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 116 HGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHAL 175
H + P+A +PLP+TS P+P A G A AV +A + T A A H
Sbjct: 397 HSAHLDPSAPPMPLPVTSPLLPSP----PAAVGGASATAVPSAASMTSTRAASASSVHVP 452
Query: 176 LGLEGVGS 183
+ G GS
Sbjct: 453 VSALGAGS 460
>gi|151101301 proteome of centriole 5 isoform 2 [Homo sapiens]
Length = 550
Score = 35.0 bits (79), Expect = 0.061
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 116 HGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHAL 175
H + P+A +PLP+TS P+P A G A AV +A + T A A H
Sbjct: 372 HSAHLDPSAPPMPLPVTSPLLPSP----PAAVGGASATAVPSAASMTSTRAASASSVHVP 427
Query: 176 LGLEGVGS 183
+ G GS
Sbjct: 428 VSALGAGS 435
>gi|17402900 far upstream element-binding protein [Homo sapiens]
Length = 644
Score = 35.0 bits (79), Expect = 0.061
Identities = 37/129 (28%), Positives = 44/129 (34%), Gaps = 29/129 (22%)
Query: 7 PTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGP----CTIGHGGAITLPGPH 62
P GPP P G P+ P +PAP P HGP G G A PH
Sbjct: 468 PHGPPGPPGPGTPMG-------PYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAY----PH 516
Query: 63 LLQKAQKDSSSSTGSP------AGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPH 116
Q+A D + + P A AHY Q Q Q P G +
Sbjct: 517 WQQQAPPDPAKAGTDPNSAAWAAYYAHYY--------QQQAQPPPAAPAGAPTTTQTNGQ 568
Query: 117 GSWRGPAAA 125
G + PA A
Sbjct: 569 GDQQNPAPA 577
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 35.0 bits (79), Expect = 0.061
Identities = 71/255 (27%), Positives = 89/255 (34%), Gaps = 54/255 (21%)
Query: 6 APTGP-PARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPGPHLL 64
AP GP P RP G + + G P P L LMV P A PGP LL
Sbjct: 1017 APLGPVPVRPPPGPELSAQPTPG----PVPQVLPASLMVSASPAGPPLIPASRPPGPVLL 1072
Query: 65 QKAQKDSSSSTG----------------------SPAGSAHYLLVLLPAQAQSQLQLQVL 102
Q +S S P A L P S L +
Sbjct: 1073 PPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLT 1132
Query: 103 VPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGP----APVVGGRGAPGAAVVLAVAAA 158
VP G P+ S A +P + A +P + R G V + A+
Sbjct: 1133 VPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLAS 1192
Query: 159 EAQLPTANADA-------LQCH--ALLGLE----GVGSLLPQPL------LILEQG-HHL 198
AQ P ANA +Q + L G + VG P+PL L+ G HHL
Sbjct: 1193 LAQRPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQ--PRPLQRNVVHLVSAGGQHHL 1250
Query: 199 LDLLAHVDALVLAVA 213
+ AHV AL+ AVA
Sbjct: 1251 ISQPAHV-ALIQAVA 1264
Score = 32.7 bits (73), Expect = 0.30
Identities = 53/210 (25%), Positives = 78/210 (37%), Gaps = 27/210 (12%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLPVS-PAPNGLSVPLMVD-HGPCTIGHGG-----A 55
P +P P + P+ + +P + PAP S PL + P T+ G +
Sbjct: 1418 PNSSPLASPVSSTVSVPLSSSLPISVPTTLPAP--ASAPLTIPISAPLTVSASGPALLTS 1475
Query: 56 ITLPGPHLLQKAQKDSS--SSTGSPAGSAHYL-LVLLPAQAQSQLQLQVLVPWGCMASPS 112
+T P ++ A S S SP+ SA L L P+ + SQ L+ S
Sbjct: 1476 VTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLL--APTSSH 1533
Query: 113 LPPHGSWRGPA-------AAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTA 165
+P S PA A+A+ P S PAP AP ++ A+A A +
Sbjct: 1534 VPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAP 1593
Query: 166 NADALQCHALLGLEGVGSLLPQPLLILEQG 195
A+L L P P+L G
Sbjct: 1594 QT------AILAPSPAPPLAPLPVLAPSPG 1617
Score = 30.0 bits (66), Expect = 2.0
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 29/152 (19%)
Query: 6 APTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCT-IGHGGAITLPGPHLL 64
APT P PV + S +PAP GLS+PL + P T + + G + + ++
Sbjct: 1264 APTPGPT------PVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKI----VV 1313
Query: 65 QKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGPAA 124
++A +D + A + LPA + L P G + +P+L G A
Sbjct: 1314 RQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPR---PTLTP-GRLPTPTL-------GTAR 1362
Query: 125 AAVPLP------LTSEAGPAPVVGGRGAPGAA 150
A +P P L P+P V APGAA
Sbjct: 1363 APMPTPTLVRPLLKLVHSPSPEVSA-SAPGAA 1393
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 34.7 bits (78), Expect = 0.079
Identities = 46/172 (26%), Positives = 59/172 (34%), Gaps = 25/172 (14%)
Query: 5 GAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLS----VPLMVDHGPCTI---GHGGAIT 57
GAP PP S PV G P P P G S VP D G + G GA
Sbjct: 592 GAPPVPPTGDSGAPPVPPTGDSGAPPVP-PTGDSGAPPVPPTGDSGAPPVPPTGDSGAPP 650
Query: 58 LPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHG 117
+P DS + P G + P + P G +P +PP G
Sbjct: 651 VP-------PTGDSGAPPVPPTGDSG----APPVPPTGDAGPPPVPPTGDSGAPPVPPTG 699
Query: 118 SWRGPAAA------AVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLP 163
P P+P T ++G PV + A V + EAQ+P
Sbjct: 700 DSGAPPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMP 751
>gi|239509062 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 34.7 bits (78), Expect = 0.079
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 35/188 (18%)
Query: 61 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 120
P LL + Q S +P+ S H +L AQ +L Q L WG +PP S
Sbjct: 67 PALLSQTQLGSFPPLRAPSLSQHPEPGVLRPDAQQRLSAQPLSEWGSCLPLPIPPSRS-- 124
Query: 121 GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG 180
P P PL S P A P AD L +G
Sbjct: 125 SPEPQPPPYPLVS-------------PNLLQASPQAPLTCSTPGLGADDLG-------DG 164
Query: 181 VGSLLPQPLLILEQGHHLLDLLAHVDALVL--------AVAVDVLEVLE---CLDGVEVL 229
G +L PL+IL + LDL A V A VL A A V V+E L+G+ V
Sbjct: 165 FGPIL-GPLVILREPVE-LDLTAEVVAGVLPEGGRDPQAAAQAVSGVIEGGLLLEGLRVC 222
Query: 230 AALVGHPL 237
A H L
Sbjct: 223 ADPTVHLL 230
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 34.7 bits (78), Expect = 0.079
Identities = 45/150 (30%), Positives = 54/150 (36%), Gaps = 49/150 (32%)
Query: 3 PRG--APTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCTIGHGGAITLPG 60
PRG P+GPP +P G P GL P GL P GP +G G LPG
Sbjct: 70 PRGHPGPSGPPGKPGYGSP-------GLQGEP---GLPGP----PGPSAVGKPGVPGLPG 115
Query: 61 PHLLQKAQKDSSSSTG--SPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGS 118
+ ++ G PAG LP P G P +P
Sbjct: 116 ----KPGERGPYGPKGDVGPAG--------LPG------------PRGPPGPPGIP---- 147
Query: 119 WRGPAAAAVPLPLTSEAGPAPVVGGRGAPG 148
GPA +VP + GP G RG PG
Sbjct: 148 --GPAGISVP-GKPGQQGPTGAPGPRGFPG 174
Score = 32.3 bits (72), Expect = 0.39
Identities = 27/69 (39%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
Query: 3 PRGAPTGPPARPSAGEPVRIWF--SVGLPVSPAP--------NGLSVPLMVDHGPCTIGH 52
PRGAP P R G P F S G P SP P GL+ P P GH
Sbjct: 441 PRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGH 500
Query: 53 GGAITLPGP 61
G LPGP
Sbjct: 501 SGEPGLPGP 509
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 34.7 bits (78), Expect = 0.079
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 13/120 (10%)
Query: 108 MASPSLPPHGSWRGPAAAAVPLPLTSEAGP------------APVVGGRGAPGAAVVLAV 155
+AS LPP S PA+ + PLP T P APV+ AP A LA
Sbjct: 1749 LASAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAP 1808
Query: 156 AAAEAQLPTANADALQCHALLGLEGVGSL-LPQPLLILEQGHHLLDLLAHVDALVLAVAV 214
+A A + + + A+ S P P+L + +LA +LA A+
Sbjct: 1809 VSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASAL 1868
Score = 33.1 bits (74), Expect = 0.23
Identities = 41/154 (26%), Positives = 54/154 (35%), Gaps = 6/154 (3%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSP-APNGLSVPLMVDHGPCTIGHGGAITLP 59
+ P A T P S PV S +P SP AP S + T AIT
Sbjct: 1774 LTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPAST--SAAAITSS 1831
Query: 60 GPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSW 119
A +S +PA +P A + P +SP+ P +
Sbjct: 1832 SAPASAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAP 1891
Query: 120 RGPAAA---AVPLPLTSEAGPAPVVGGRGAPGAA 150
PA+A +VPL S + PAP AP A
Sbjct: 1892 TIPASAPTASVPLAPASASAPAPAPTPVSAPNPA 1925
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 34.3 bits (77), Expect = 0.10
Identities = 53/184 (28%), Positives = 62/184 (33%), Gaps = 39/184 (21%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLP-VSPAPNGLSVPLMVDHGPCTIGHGGAITLPGP 61
P G GP A +A F G V P G VP G GAI PG
Sbjct: 245 PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP----------GVPGAI--PG- 291
Query: 62 HLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRG 121
G AG V PA A + +G A+ L P G G
Sbjct: 292 -------------IGGIAG------VGTPAAAAAAAAAAKAAKYG--AAAGLVPGGPGFG 330
Query: 122 PAAAAVP---LPLTSEAGPA-PVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLG 177
P VP +P G PVV G G PGAAV V+ A A A +G
Sbjct: 331 PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 390
Query: 178 LEGV 181
+ G+
Sbjct: 391 VGGI 394
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 34.3 bits (77), Expect = 0.10
Identities = 53/184 (28%), Positives = 62/184 (33%), Gaps = 39/184 (21%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLP-VSPAPNGLSVPLMVDHGPCTIGHGGAITLPGP 61
P G GP A +A F G V P G VP G GAI PG
Sbjct: 250 PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP----------GVPGAI--PG- 296
Query: 62 HLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRG 121
G AG V PA A + +G A+ L P G G
Sbjct: 297 -------------IGGIAG------VGTPAAAAAAAAAAKAAKYG--AAAGLVPGGPGFG 335
Query: 122 PAAAAVP---LPLTSEAGPA-PVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLG 177
P VP +P G PVV G G PGAAV V+ A A A +G
Sbjct: 336 PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 395
Query: 178 LEGV 181
+ G+
Sbjct: 396 VGGI 399
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 34.3 bits (77), Expect = 0.10
Identities = 53/184 (28%), Positives = 62/184 (33%), Gaps = 39/184 (21%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLP-VSPAPNGLSVPLMVDHGPCTIGHGGAITLPGP 61
P G GP A +A F G V P G VP G GAI PG
Sbjct: 250 PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP----------GVPGAI--PG- 296
Query: 62 HLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRG 121
G AG V PA A + +G A+ L P G G
Sbjct: 297 -------------IGGIAG------VGTPAAAAAAAAAAKAAKYG--AAAGLVPGGPGFG 335
Query: 122 PAAAAVP---LPLTSEAGPA-PVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLG 177
P VP +P G PVV G G PGAAV V+ A A A +G
Sbjct: 336 PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 395
Query: 178 LEGV 181
+ G+
Sbjct: 396 VGGI 399
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 34.3 bits (77), Expect = 0.10
Identities = 53/184 (28%), Positives = 62/184 (33%), Gaps = 39/184 (21%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLP-VSPAPNGLSVPLMVDHGPCTIGHGGAITLPGP 61
P G GP A +A F G V P G VP G GAI PG
Sbjct: 235 PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP----------GVPGAI--PG- 281
Query: 62 HLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRG 121
G AG V PA A + +G A+ L P G G
Sbjct: 282 -------------IGGIAG------VGTPAAAAAAAAAAKAAKYG--AAAGLVPGGPGFG 320
Query: 122 PAAAAVP---LPLTSEAGPA-PVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLG 177
P VP +P G PVV G G PGAAV V+ A A A +G
Sbjct: 321 PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 380
Query: 178 LEGV 181
+ G+
Sbjct: 381 VGGI 384
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 34.3 bits (77), Expect = 0.10
Identities = 53/184 (28%), Positives = 62/184 (33%), Gaps = 39/184 (21%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLP-VSPAPNGLSVPLMVDHGPCTIGHGGAITLPGP 61
P G GP A +A F G V P G VP G GAI PG
Sbjct: 245 PTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP----------GVPGAI--PG- 291
Query: 62 HLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRG 121
G AG V PA A + +G A+ L P G G
Sbjct: 292 -------------IGGIAG------VGTPAAAAAAAAAAKAAKYG--AAAGLVPGGPGFG 330
Query: 122 PAAAAVP---LPLTSEAGPA-PVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLG 177
P VP +P G PVV G G PGAAV V+ A A A +G
Sbjct: 331 PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVG 390
Query: 178 LEGV 181
+ G+
Sbjct: 391 VGGI 394
>gi|239754746 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 34.3 bits (77), Expect = 0.10
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 35/188 (18%)
Query: 61 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 120
P LL + Q S +P+ S H +L AQ +L Q L WG +PP S
Sbjct: 67 PALLSQTQLGSFPPLRAPSLSQHPEPGVLRPDAQQRLSAQPLSEWGSCLPLPIPPSRS-- 124
Query: 121 GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG 180
P P PL S P A P AD L +G
Sbjct: 125 SPEPQPPPYPLVS-------------PNLLQASPQAPLTCSTPGLGADDLG-------DG 164
Query: 181 VGSLLPQPLLILEQGHHLLDLLAHVDALVL--------AVAVDVLEVLE---CLDGVEVL 229
G +L PL+IL + LDL A V A VL A A V V+E L+G+ V
Sbjct: 165 FGPIL-GPLVILREPVE-LDLTAEVVAGVLPEGGRDPQAAAQAVSGVIEGGLLLEGLRVR 222
Query: 230 AALVGHPL 237
A H L
Sbjct: 223 ADPTVHLL 230
>gi|239749281 PREDICTED: hypothetical protein XP_002346979 [Homo
sapiens]
Length = 262
Score = 34.3 bits (77), Expect = 0.10
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 35/188 (18%)
Query: 61 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 120
P LL + Q S +P+ S H +L AQ +L Q L WG +PP S
Sbjct: 67 PALLSQTQLGSFPPLRAPSLSQHPEPGVLRPDAQQRLSAQPLSEWGSCLPLPIPPSRS-- 124
Query: 121 GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG 180
P P PL S P A P AD L +G
Sbjct: 125 SPEPQPPPYPLVS-------------PNLLQASPQAPLTCSTPGLGADDLG-------DG 164
Query: 181 VGSLLPQPLLILEQGHHLLDLLAHVDALVL--------AVAVDVLEVLE---CLDGVEVL 229
G +L PL+IL + LDL A V A VL A A V V+E L+G+ V
Sbjct: 165 FGPIL-GPLVILREPVE-LDLTAEVVAGVLPEGGRDPQAAAQAVSGVIEGGLLLEGLRVR 222
Query: 230 AALVGHPL 237
A H L
Sbjct: 223 ADPTVHLL 230
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 34.3 bits (77), Expect = 0.10
Identities = 38/147 (25%), Positives = 53/147 (36%), Gaps = 12/147 (8%)
Query: 7 PTGPPARPSAGEPVRIWFSVGLP----VSPAPNGLSVPLMVDHGPCTIGHGGAITLPGPH 62
P P A+ + P + G P V P P +P ++ H P + G H
Sbjct: 766 PPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKV---GVH 822
Query: 63 LLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGP 122
LL+ A +D + P +P Q ++ L+ L P SP L P S P
Sbjct: 823 LLEPATRDGAPQPPPPPPPPP---PPMPLQLEAHLRSHGLEP--AAPSPRLRPEESLDPP 877
Query: 123 AAAAVPLPLTSEAGPAPVVGGRGAPGA 149
A L PAP G G P +
Sbjct: 878 GAMQELLGALEPLPPAPGDTGVGPPNS 904
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 33.9 bits (76), Expect = 0.14
Identities = 49/180 (27%), Positives = 60/180 (33%), Gaps = 8/180 (4%)
Query: 3 PRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGP-CTIGHGGAITL-PG 60
P G P P + +PV L SP P VPL P HG + P
Sbjct: 1214 PEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPK 1273
Query: 61 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPA-QAQSQLQLQVLVPWGCMASPSLPPHGSW 119
P A K + G P+GSA PA Q + L P ASP+ PP
Sbjct: 1274 PPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPP---- 1329
Query: 120 RGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLE 179
P A A+ +P A AP A A A+ A AL +E
Sbjct: 1330 -SPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGDSARQKLEETSACLAAALQAVE 1388
Score = 31.6 bits (70), Expect = 0.67
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 61 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASP-SLPPHGSW 119
P K + S + G P G A PA A+ + Q+L P SP SLP +
Sbjct: 777 PQTPTKTRPGSPQALGGPHGPA-------PATAKVKPTPQLLPPTERPMSPRSLPQSPTH 829
Query: 120 RGPAAAAVPLPLTSEAGP-APVVGGRGAPGAAVVLAV---AAAEAQLPTANADALQCHA 174
RG A +P P+ E GP AP P A L + A AE P A +L +A
Sbjct: 830 RG-FAYVLPQPVEGEVGPAAPGPAPPPVPTAVPTLCLPPEADAEPGRPKKRAHSLNRYA 887
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,189,820
Number of Sequences: 37866
Number of extensions: 736973
Number of successful extensions: 4070
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 3559
Number of HSP's gapped (non-prelim): 652
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.