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Search of human proteins with 239756637
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756637 PREDICTED: hypothetical protein [Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756637 PREDICTED: hypothetical protein [Homo sapiens] 475 e-134
gi|239745614 PREDICTED: hypothetical protein XP_002344157 [Homo ... 475 e-134
gi|239751123 PREDICTED: hypothetical protein XP_002347725 [Homo ... 409 e-114
gi|110624794 erythrocyte membrane protein band 4.1 like 4B isofo... 33 0.26
gi|110624790 erythrocyte membrane protein band 4.1 like 4B isofo... 33 0.26
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens] 32 0.35
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 32 0.45
gi|239757291 PREDICTED: hypothetical protein [Homo sapiens] 31 1.0
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 31 1.0
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens] 31 1.0
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 31 1.0
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 30 2.2
gi|56237021 fibrillin 3 precursor [Homo sapiens] 30 2.2
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens] 29 2.9
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens] 29 2.9
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens] 29 2.9
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens] 29 2.9
gi|28875797 small protein rich in arginine and glycine [Homo sap... 29 2.9
gi|11386181 H2.0-like homeobox [Homo sapiens] 29 2.9
gi|169790811 SHC (Src homology 2 domain containing) transforming... 29 2.9
gi|239757714 PREDICTED: hypothetical protein XP_002345529 [Homo ... 29 3.8
gi|239754487 PREDICTED: hypothetical protein [Homo sapiens] 29 3.8
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom... 29 3.8
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 29 3.8
gi|239749042 PREDICTED: hypothetical protein [Homo sapiens] 29 3.8
gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 29 3.8
gi|239743067 PREDICTED: hypothetical protein [Homo sapiens] 29 3.8
gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 29 3.8
gi|239508713 PREDICTED: hypothetical protein [Homo sapiens] 29 3.8
gi|23110966 light ear protein isoform a [Homo sapiens] 29 3.8
>gi|239756637 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 475 bits (1222), Expect = e-134
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD 60
MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD
Sbjct: 1 MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD 60
Query: 61 LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL 120
LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL
Sbjct: 61 LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL 120
Query: 121 LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER 180
LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER
Sbjct: 121 LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER 180
Query: 181 FGQHVGHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSGS 229
FGQHVGHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSGS
Sbjct: 181 FGQHVGHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSGS 229
>gi|239745614 PREDICTED: hypothetical protein XP_002344157 [Homo
sapiens]
Length = 229
Score = 475 bits (1222), Expect = e-134
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD 60
MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD
Sbjct: 1 MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD 60
Query: 61 LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL 120
LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL
Sbjct: 61 LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL 120
Query: 121 LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER 180
LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER
Sbjct: 121 LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER 180
Query: 181 FGQHVGHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSGS 229
FGQHVGHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSGS
Sbjct: 181 FGQHVGHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSGS 229
>gi|239751123 PREDICTED: hypothetical protein XP_002347725 [Homo
sapiens]
Length = 296
Score = 409 bits (1050), Expect = e-114
Identities = 200/225 (88%), Positives = 202/225 (89%), Gaps = 3/225 (1%)
Query: 1 MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD 60
MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD
Sbjct: 1 MPHPGRRWHLVNILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAGTRD 60
Query: 61 LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL 120
LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL
Sbjct: 61 LVEALLSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWL 120
Query: 121 LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER 180
LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER
Sbjct: 121 LIIHAHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIER 180
Query: 181 FGQHVGHGHLGRRPRGLAGSGASGLG---ARVRPRRSEAPRGVPA 222
FGQHVGHGHL P + +G G AR R E R PA
Sbjct: 181 FGQHVGHGHLAAAPGAWRAAAPAGWGLGSARAAQRPREGSRRFPA 225
>gi|110624794 erythrocyte membrane protein band 4.1 like 4B isoform
1 [Homo sapiens]
Length = 518
Score = 32.7 bits (73), Expect = 0.26
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 186 GHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSGS 229
G + R RG AG GA+GLG R PRG PA + SS +
Sbjct: 10 GRRSMQRYARGAAGRGAAGLG----DERDGGPRGGPAAAASSSA 49
>gi|110624790 erythrocyte membrane protein band 4.1 like 4B isoform
2 [Homo sapiens]
Length = 900
Score = 32.7 bits (73), Expect = 0.26
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 186 GHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSGS 229
G + R RG AG GA+GLG R PRG PA + SS +
Sbjct: 10 GRRSMQRYARGAAGRGAAGLG----DERDGGPRGGPAAAASSSA 49
>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 32.3 bits (72), Expect = 0.35
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 186 GHGHLGRRPRGL-----AGSGASGLGARVRPRRSEAPRGVPALSG 225
G G G PRG GSG SG G R P + P G AL G
Sbjct: 25 GRGRRGPAPRGQTGTQGVGSGGSGAGVRPEPCAGQRPAGGKALRG 69
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 32.0 bits (71), Expect = 0.45
Identities = 39/116 (33%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Query: 29 GRAGKRVMGCLL----REGGCLLGWGRLELRAGTRDLVEALLSLAGSGHQVDAVWLGLVG 84
GR G R G L R GGCLLG GR + G R +++ L A S L
Sbjct: 625 GRRGLRQRGRWLVGLGRLGGCLLGLGR-RIGPGARLVLQEQLLAAES---------LLAA 674
Query: 85 VGEHGRVLGGRRRWGMEARLRLGRGGGRAGAR-------PCWLLIIHAHQDLEAVP 133
+ ++ G RR E R GRG GR G R L + AH+DL +P
Sbjct: 675 IAAVHQLHRGLRRRQKELR-HHGRGRGRRGGRRGRAVGLEVPLQVGVAHEDLAGLP 729
>gi|239757291 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 30.8 bits (68), Expect = 1.0
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 140 PMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVI---ERFGQHVGHGHLGRRPRG 196
P+ A PA L V R +TLA GE + G G + + H+GH H G
Sbjct: 26 PLASAAAPARPILLVTCV-RVAITLASGEEVEGYGAPMACSGPGWTPHIGHPHPGPPRHT 84
Query: 197 LAGSGASGLGARVRPRRSEAPRGVPALS 224
GA+G RR+E P P S
Sbjct: 85 SRNGGAAG------TRRTELPEHSPGSS 106
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 30.8 bits (68), Expect = 1.0
Identities = 45/162 (27%), Positives = 56/162 (34%), Gaps = 49/162 (30%)
Query: 70 GSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGG-----------------GR 112
G GH + + + G GR GG+ R G R + GR G G
Sbjct: 344 GGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGA 403
Query: 113 AGARPCWLLIIHAHQDLEAVPRHDALAPMQ-RAEPPAVQALRVLLQHRHDVTLAEGELIR 171
G R W+L +HA Q A P+Q +A P HR LA+ L
Sbjct: 404 LGLRWQWVL-VHAGQ---------AGQPLQGQARGP----------HR-PAALAQEAL-- 440
Query: 172 GLGHIVIERFGQHVGHGHLGRRPRGLAGSGASGLGARVRPRR 213
R HG R RGL G+G G G P R
Sbjct: 441 --------RAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWR 474
>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 30.8 bits (68), Expect = 1.0
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 186 GHGHLGRRPRGLAG-----SGASGLGARVRPRRSEAPRGVPALSG 225
G G G PRG G SG G G R P + P G AL G
Sbjct: 25 GRGRRGPAPRGQTGTQGVGSGGGGAGVRPEPCAGQRPAGGKALRG 69
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 30.8 bits (68), Expect = 1.0
Identities = 45/162 (27%), Positives = 56/162 (34%), Gaps = 49/162 (30%)
Query: 70 GSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGG-----------------GR 112
G GH + + + G GR GG+ R G R + GR G G
Sbjct: 344 GGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGA 403
Query: 113 AGARPCWLLIIHAHQDLEAVPRHDALAPMQ-RAEPPAVQALRVLLQHRHDVTLAEGELIR 171
G R W+L +HA Q A P+Q +A P HR LA+ L
Sbjct: 404 LGLRWQWVL-VHAGQ---------AGQPLQGQARGP----------HR-PAALAQEAL-- 440
Query: 172 GLGHIVIERFGQHVGHGHLGRRPRGLAGSGASGLGARVRPRR 213
R HG R RGL G+G G G P R
Sbjct: 441 --------RAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWR 474
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 182 GQHVGHGHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGS 226
G+ + G LG R RG A G G R R + APR PA GS
Sbjct: 85 GRALPGGRLGGRGRGRAPERVGGRG---RGRGTAAPRAAPAARGS 126
>gi|56237021 fibrillin 3 precursor [Homo sapiens]
Length = 2809
Score = 29.6 bits (65), Expect = 2.2
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 7/41 (17%)
Query: 188 GHLGRRPRGLAGSGASGLG-----ARVRPRRSEAPRGVPAL 223
GH G P GL G G++G+G AR+ P S+A RG+P+L
Sbjct: 355 GHPGLFP-GLLGFGSNGMGPPLGPARLNPHGSDA-RGIPSL 393
>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
Length = 517
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 191 GRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSG 228
GRR RG +GS +G+ VR + P VP+L G G
Sbjct: 55 GRRSRGASGSEPQQMGSDVRDLNALLP-AVPSLGGGGG 91
>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
Length = 500
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 191 GRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSG 228
GRR RG +GS +G+ VR + P VP+L G G
Sbjct: 55 GRRSRGASGSEPQQMGSDVRDLNALLP-AVPSLGGGGG 91
>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
Length = 514
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 191 GRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSG 228
GRR RG +GS +G+ VR + P VP+L G G
Sbjct: 55 GRRSRGASGSEPQQMGSDVRDLNALLP-AVPSLGGGGG 91
>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
Length = 497
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 191 GRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGSSG 228
GRR RG +GS +G+ VR + P VP+L G G
Sbjct: 55 GRRSRGASGSEPQQMGSDVRDLNALLP-AVPSLGGGGG 91
>gi|28875797 small protein rich in arginine and glycine [Homo
sapiens]
Length = 248
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 185 VGHGHLGRRPRGLAGSGASGLGARVRPR 212
+G G +G R RG+ G G G G R R R
Sbjct: 172 MGRGGIGGRGRGMIGRGRGGFGGRGRGR 199
Score = 28.5 bits (62), Expect = 5.0
Identities = 40/121 (33%), Positives = 48/121 (39%), Gaps = 24/121 (19%)
Query: 12 NILGRASRPWGHLVQVCGRAGKRVMGCLLREGGCLLGWGRLELRAG--TRDLVEALLSLA 69
NI R RP G L + G G R + + R G R LR G TR L+ +SL
Sbjct: 83 NIQARLGRPIGALAR--GAIGGRGLPIIQR------GLPRGGLRGGRATRTLLRGGMSLR 134
Query: 70 GS----GHQVDAVWLGL----------VGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGA 115
G G + A +GL G G GR GR G R +GRG G G
Sbjct: 135 GQNLLRGGRAVAPRMGLRRGGVRGRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGGFGG 194
Query: 116 R 116
R
Sbjct: 195 R 195
Score = 28.5 bits (62), Expect = 5.0
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 80 LGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGR-AGARP 117
+G G+G GR + GR R G R R GRG GR A ARP
Sbjct: 172 MGRGGIGGRGRGMIGRGRGGFGGRGR-GRGRGRGALARP 209
>gi|11386181 H2.0-like homeobox [Homo sapiens]
Length = 488
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 184 HVGHGHLGRRPRGLAGSGASGLGARV 209
H G G LG P GLAG+ A+ L A +
Sbjct: 51 HAGVGDLGAAPEGLAGASAAALTAHL 76
>gi|169790811 SHC (Src homology 2 domain containing) transforming
protein 2 [Homo sapiens]
Length = 582
Score = 29.3 bits (64), Expect = 2.9
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 188 GHLGRRPRGLAGSGASGLGARVRPRRSEAPRGVPALSGS 226
G LGR P +GASG GA +P + P GVPAL+ +
Sbjct: 42 GFLGRGPAAARAAGASG-GADPQPEPA-GPGGVPALAAA 78
>gi|239757714 PREDICTED: hypothetical protein XP_002345529 [Homo
sapiens]
Length = 764
Score = 28.9 bits (63), Expect = 3.8
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 31/137 (22%)
Query: 61 LVEALLSLAGSGHQVDAV-------WLGLVGVGEHGRVLGGRRRWGMEAR-LRLGRGGGR 112
+V +++L H++ AV +G G+G HGR L + + + LRL
Sbjct: 130 VVHLVVALLLEDHRLKAVAPQDLAGQVGAAGLGGHGRGLHHALQDDHDLKVLRLQ----- 184
Query: 113 AGARPCWLLIIHAHQD---LEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGEL 169
LL+ HA + ++ V D R + AVQA ++ H +V L +G++
Sbjct: 185 -------LLLAHAIKRAVLVDLVDNDDG-----RHQEDAVQA--DVIAHV-EVPLVQGQV 229
Query: 170 IRGLGHIVIERFGQHVG 186
+ LGH+ ++ G HVG
Sbjct: 230 LALLGHVGLDELGPHVG 246
>gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 84 GVGEHGRVLGGRRRWGMEARLRLGRGGGRAGAR 116
G+GE GR G R G + GR GGR G +
Sbjct: 208 GIGERGREGGKEGREGRRKERKEGREGGREGGK 240
>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
sapiens]
Length = 501
Score = 28.9 bits (63), Expect = 3.8
Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 18/152 (11%)
Query: 31 AGKRVMGCLLREGGCLLGWG-----RLELRAGTRDLVEALLSLAGSGHQVDAVWLGLVGV 85
AG+ V+G +G ++G G RL++RA LAGSG +++ + L+ V
Sbjct: 6 AGEEVVG----DGLSVMGTGDTVQPRLDVRAEEHSACRRSAQLAGSGQDWNSLTMQLLAV 61
Query: 86 GEHGRVLGGRRRWGME-ARLRLGRGGGRAGARPCWLLIIHAHQD---LEAVPRHDALAPM 141
E R +E + G GR GA P + D +A RH LA +
Sbjct: 62 PESLAPFPFTTREALELLPIPHCPGAGRMGASPPSDYTFTSDSDPFTSQATIRHLLLADL 121
Query: 142 QRAE-----PPAVQALRVLLQHRHDVTLAEGE 168
E P+V L LL + EGE
Sbjct: 122 AMLEAGWIPSPSVVTLPSLLAPDLQAWMVEGE 153
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 28.9 bits (63), Expect = 3.8
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 31/137 (22%)
Query: 61 LVEALLSLAGSGHQVDAV-------WLGLVGVGEHGRVLGGRRRWGMEAR-LRLGRGGGR 112
+V +++L H++ AV +G G+G HGR L + + + LRL
Sbjct: 130 VVHLVVALLLEDHRLKAVAPQDLAGQVGAAGLGGHGRGLHHALQDDHDLKVLRLQ----- 184
Query: 113 AGARPCWLLIIHAHQD---LEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGEL 169
LL+ HA + ++ V D R + AVQA ++ H +V L +G++
Sbjct: 185 -------LLLAHAIKRAVLVDLVDNDDG-----RHQEDAVQA--DVIAHV-EVPLVQGQV 229
Query: 170 IRGLGHIVIERFGQHVG 186
+ LGH+ ++ G HVG
Sbjct: 230 LALLGHVGLDELGPHVG 246
>gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 84 GVGEHGRVLGGRRRWGMEARLRLGRGGGRAGAR 116
G+GE GR G R G + GR GGR G +
Sbjct: 208 GIGERGREGGKEGREGRRKERKEGREGGREGGK 240
>gi|169164783 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 28.9 bits (63), Expect = 3.8
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 11/154 (7%)
Query: 66 LSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWLLIIHA 125
L AG G + LG G G R LGG+ G+ A++ +G G R G H
Sbjct: 131 LDPAGIGQVLGLGVLG--GAGRQRRALGGQAL-GLLAQVGIGAGHARGGRGAVGPAGQHR 187
Query: 126 HQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIERFGQHV 185
+ AV R A AP +R A +A + A + G + E G+ +
Sbjct: 188 ARLGAAVLRGTAGAPARRVGVVAERAASAACSLQRQRLHARRRVREQRGRVAREVRGRVI 247
Query: 186 GHGH-----LGRRPRGLAGSGAS---GLGARVRP 211
G G +GRR + G + GL R +P
Sbjct: 248 GRGREVQPVVGRRHKPALRRGRARVLGLLRRQQP 281
Score = 27.7 bits (60), Expect = 8.5
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 175 HIVIERFGQHVGHGHLGRR---PRGL------AGSGASGLGARVRPRRSEAPRGVPALSG 225
H+ +ER G+ +GHG +GRR P GL AG G R+ P G+ L G
Sbjct: 89 HLALER-GRTLGHGRVGRRDPPPLGLLVNPRVAGVDGLDRGGRLDPAGIGQVLGLGVLGG 147
Query: 226 S 226
+
Sbjct: 148 A 148
>gi|239743067 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 84 GVGEHGRVLGGRRRWGMEARLRLGRGGGRAGAR 116
G+GE GR G R G + GR GGR G +
Sbjct: 208 GIGERGREGGKEGREGRRKERKEGREGGREGGK 240
>gi|169163482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 28.9 bits (63), Expect = 3.8
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 11/154 (7%)
Query: 66 LSLAGSGHQVDAVWLGLVGVGEHGRVLGGRRRWGMEARLRLGRGGGRAGARPCWLLIIHA 125
L AG G + LG G G R LGG+ G+ A++ +G G R G H
Sbjct: 131 LDPAGIGQVLGLGVLG--GAGRQRRALGGQAL-GLLAQVGIGAGHARGGRGAVGPAGQHR 187
Query: 126 HQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIERFGQHV 185
+ AV R A AP +R A +A + A + G + E G+ +
Sbjct: 188 ARLGAAVLRGTAGAPARRVGVVAERAASAACSLQRQRLHARRRVREQRGRVAREVRGRVI 247
Query: 186 GHGH-----LGRRPRGLAGSGAS---GLGARVRP 211
G G +GRR + G + GL R +P
Sbjct: 248 GRGREVQPVVGRRHKPALRRGRARVLGLLRRQQP 281
Score = 27.7 bits (60), Expect = 8.5
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 175 HIVIERFGQHVGHGHLGRR---PRGL------AGSGASGLGARVRPRRSEAPRGVPALSG 225
H+ +ER G+ +GHG +GRR P GL AG G R+ P G+ L G
Sbjct: 89 HLALER-GRTLGHGRVGRRDPPPLGLLVNPRVAGVDGLDRGGRLDPAGIGQVLGLGVLGG 147
Query: 226 S 226
+
Sbjct: 148 A 148
>gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 84 GVGEHGRVLGGRRRWGMEARLRLGRGGGRAGAR 116
G+GE GR G R G + GR GGR G +
Sbjct: 208 GIGERGREGGKEGREGRRKERKEGREGGREGGK 240
>gi|23110966 light ear protein isoform a [Homo sapiens]
Length = 708
Score = 28.9 bits (63), Expect = 3.8
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Query: 125 AHQDLEAVPRHDALAPMQRAEPPAVQALRVLLQHRHDV-----TLAEGELIRGLGHIVIE 179
A + LE P H + AP+ RA+P + R LL R D L GE +GL V
Sbjct: 439 AQEQLEDHPGHSSQAPIPRADPLPRRTRRPLLLPRLDPGQRGNKLPTGE--QGLDEDVDG 496
Query: 180 RFGQHVGHG---HLGRRPRGLAGSGASGLGARVRPRRS 214
H G G AG A G+ +R+ P S
Sbjct: 497 VCESHAAPGLECSSGSANCQGAGPSADGISSRLTPAES 534
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.143 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,817,491
Number of Sequences: 37866
Number of extensions: 485643
Number of successful extensions: 1833
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 1785
Number of HSP's gapped (non-prelim): 103
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.