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Search of human proteins with 239756562
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756562 PREDICTED: hypothetical protein [Homo sapiens] 478 e-135
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 260 8e-70
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 257 5e-69
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 254 3e-68
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ... 253 1e-67
gi|239754599 PREDICTED: hypothetical protein [Homo sapiens] 251 5e-67
gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo ... 242 2e-64
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 239 1e-63
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ... 239 1e-63
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 89 2e-18
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 52 4e-07
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 52 4e-07
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 52 4e-07
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 52 6e-07
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 50 1e-06
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 49 4e-06
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 49 5e-06
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 49 5e-06
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 48 8e-06
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 46 2e-05
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 45 4e-05
gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo ... 45 5e-05
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo ... 45 5e-05
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 45 5e-05
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 45 5e-05
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 45 7e-05
gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Ho... 45 7e-05
>gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 478 bits (1230), Expect = e-135
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MQLRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAADEVLELPALLQRPAGRRPCASH 60
MQLRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAADEVLELPALLQRPAGRRPCASH
Sbjct: 1 MQLRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAADEVLELPALLQRPAGRRPCASH 60
Query: 61 RGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPS 120
RGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPS
Sbjct: 61 RGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPS 120
Query: 121 QDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPR 180
QDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPR
Sbjct: 121 QDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPR 180
Query: 181 RRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRRLLGLLPCLWPRV 235
RRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRRLLGLLPCLWPRV
Sbjct: 181 RRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRRLLGLLPCLWPRV 235
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 260 bits (664), Expect = 8e-70
Identities = 152/261 (58%), Positives = 169/261 (64%), Gaps = 48/261 (18%)
Query: 3 LRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCA 58
L N GP YL PYLLLGEV+GHSALGAQPAQAA DE+LELPALLQ PAG PCA
Sbjct: 6 LEPNPGPRPRYLHSPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQLPAGCDPCA 65
Query: 59 SHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRC 118
S R R+TPATALL LSHRGRA+RRSM AAAA+ S GR +GK PP+RESWTRS P+ C
Sbjct: 66 SLRDSRVTPATALLPLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRSDPRHC 125
Query: 119 PSQDAGRAGSRVCRSRPQSRG---------------------------------GQKAAA 145
SQDA R+GSRVCRSRPQ+RG GQK+ A
Sbjct: 126 ISQDASRSGSRVCRSRPQTRGGGGKKPRRQKDAAAGAKSRGGKKPRRGRKPRRRGQKSTA 185
Query: 146 SGAKRRGVGGKEPRRQKPAAAGAKSRGGK------SHKKPRRRGQKAAPAKNSGGGGNKP 199
+GAK RG GGK+PR+QKPAAAGAKS G KKP R GQ+A + GGGG KP
Sbjct: 186 AGAKSRGEGGKKPRQQKPAAAGAKSGLGDKKSRRWGRKKPGRWGQEAVAGETCGGGGKKP 245
Query: 200 QKAAAAGAKNRGGGGGKKPRR 220
QKAAA GAK+ KKPRR
Sbjct: 246 QKAAAPGAKSH-----KKPRR 261
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 257 bits (657), Expect = 5e-69
Identities = 148/223 (66%), Positives = 161/223 (72%), Gaps = 28/223 (12%)
Query: 16 GPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCASHRGRRITPATAL 71
GPYLLLGE VGHSALGAQP QAA DE+LELPALLQRPAGR PCA+ R ITPA AL
Sbjct: 12 GPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPAL 71
Query: 72 LLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVC 131
LLLSH A+RRSMQA AKAGSPGR R+GK P RESWTRSAP+RCP QDA RAGSRVC
Sbjct: 72 LLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVC 131
Query: 132 RSRPQSRGG-----QKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKA 186
RSRPQ+RGG ++ AK RG GGK+PR QK A AGA K H+KPRRRG++A
Sbjct: 132 RSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGA-----KKHRKPRRRGERA 186
Query: 187 APAKNSGGGGNKPQKAAAAGAKNRGGG-------GGKKPRRGR 222
A A GG K QKAAA AK+RGGG GGKKPRR R
Sbjct: 187 AAA-----GGKKLQKAAA--AKSRGGGGKKTAAAGGKKPRRRR 222
Score = 56.6 bits (135), Expect = 2e-08
Identities = 63/196 (32%), Positives = 82/196 (41%), Gaps = 50/196 (25%)
Query: 53 GRRPCASHRGRRITPATALLLLSHRGRAERRS-------MQAAAAKA-GSPGRRRVGKG- 103
G++P RG++ A A R R ER + +AAAAK+ G G++ G
Sbjct: 160 GKKP----RGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGG 215
Query: 104 -PPSRESWTRSAPQR------CPSQDAGRAGSRVCRSRPQSRGGQKAAASG--AKRRGVG 154
P R ++A R Q A G + + RGG+K G K RG G
Sbjct: 216 KKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGG 275
Query: 155 GKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGG 214
G++P QK AAAGAKSRGG+ G KPQKA A +NR
Sbjct: 276 GEKP--QKAAAAGAKSRGGR---------------------GEKPQKAEAGQGQNRRNEV 312
Query: 215 GKKPRRGRRLLGLLPC 230
G G+ L LL C
Sbjct: 313 G-----GQHNLALLEC 323
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 254 bits (650), Expect = 3e-68
Identities = 144/229 (62%), Positives = 165/229 (72%), Gaps = 25/229 (10%)
Query: 3 LRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCA 58
L + GP +PYL GPYLLLGEV+GHSALGAQ AQ A DE+LELPALLQ P G PCA
Sbjct: 6 LEPSPGPRSPYLHGPYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHPTGCDPCA 65
Query: 59 SHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRC 118
S R R+TPATALLLLSHRGRA+RRS+QAAAA+ S GR +GK PPS+ESWTRS P+RC
Sbjct: 66 SLRDSRVTPATALLLLSHRGRAQRRSIQAAAAQEQSTGRGCLGKEPPSQESWTRSDPRRC 125
Query: 119 PSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKK 178
SQDA R+GSRVCRSRPQ+RGG GGK+PRRQK A AGAKSRGG+ KK
Sbjct: 126 LSQDAVRSGSRVCRSRPQTRGG-------------GGKQPRRQKAAVAGAKSRGGEG-KK 171
Query: 179 PRRRGQKAAP--AKNSGG-----GGNKPQKAAAAGAKNRGGGGGKKPRR 220
P+RRGQKAA AK+ GG GG K ++ A + GGGK+PRR
Sbjct: 172 PQRRGQKAATAGAKSRGGGVRSLGGKKMRRGQKGAAGAKRCGGGKQPRR 220
Score = 46.6 bits (109), Expect = 2e-05
Identities = 49/147 (33%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 50 RPAGRRPCASHRGRRITPATALLL-LSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
R G++ S R TP A + R + +R +AAAA + + G G
Sbjct: 219 RRRGQKASKSGGVRCQTPQKAAAQGVKSRKKLRQRGQKAAAAGQEAAAGKTCGGGGEKHR 278
Query: 109 SWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGA 168
P R S+ G+ + +PQ KAAA+G +RR K+ RRQK A A A
Sbjct: 279 GGGDKKPLRKNSRWRGQKAAAAGGKKPQ-----KAAAAGGERR----KKLRRQKAAVARA 329
Query: 169 KSRGGKSHKKPRRRGQKAAPAKNSGGG 195
KS KKPR RGQ NSG G
Sbjct: 330 KSP-----KKPRWRGQ------NSGNG 345
>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
sapiens]
Length = 337
Score = 253 bits (646), Expect = 1e-67
Identities = 154/272 (56%), Positives = 171/272 (62%), Gaps = 69/272 (25%)
Query: 15 QGPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCASHRGRRITPATA 70
+GPYLLLGEV+GHSALGAQPAQAA DE+LELPALLQRPAGR PCAS R R+TPATA
Sbjct: 11 EGPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQRPAGRGPCASLRDSRVTPATA 70
Query: 71 LLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRV 130
LLLLSH RA+RRSM+AAAA+ SPGRRR+GK P RESWTRSAP RC SQDAGRAGS+V
Sbjct: 71 LLLLSHCSRAQRRSMRAAAAQERSPGRRRLGKEPLIRESWTRSAPWRCLSQDAGRAGSQV 130
Query: 131 CRSRPQSRGG-------------------------QKAAASGAKRRGVGGKEPRRQKPAA 165
C S PQ+RGG QKAA +GAK G GGK+P ++KPAA
Sbjct: 131 CGSSPQTRGGGGKKLQRQKATVMGAKSRKKPQHWGQKAATAGAKSPGGGGKKPGQEKPAA 190
Query: 166 AGAKSRGGKSH-----------------------------------KKPRRRGQKA--AP 188
G K+R KS +KPR RGQKA A
Sbjct: 191 TGEKTRAAKSRGGGGKKPRREKPAAAGAKNPQKAAAAGAKFREAGGRKPRWRGQKATEAG 250
Query: 189 AKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRR 220
AK+ GGGG KPQK AAAGAK GGKKPRR
Sbjct: 251 AKSRGGGGIKPQKPAAAGAKIH---GGKKPRR 279
Score = 63.5 bits (153), Expect = 1e-10
Identities = 53/151 (35%), Positives = 69/151 (45%), Gaps = 36/151 (23%)
Query: 77 RGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQ 136
R + + +AA A A SPG G P +E + + ++ G G + R +P
Sbjct: 158 RKKPQHWGQKAATAGAKSPGG---GGKKPGQEKPAATGEKTRAAKSRGGGGKKPRREKPA 214
Query: 137 SRGG---QKAAASGAKRRGVGGKEPR--------------------RQKPAAAGAKSRGG 173
+ G QKAAA+GAK R GG++PR QKPAAAGAK GG
Sbjct: 215 AAGAKNPQKAAAAGAKFREAGGRKPRWRGQKATEAGAKSRGGGGIKPQKPAAAGAKIHGG 274
Query: 174 KSHKKPRRRGQKAAPAKNSGGGGNKPQKAAA 204
KKPRRRGQ S G G + Q + A
Sbjct: 275 ---KKPRRRGQ-------SSGNGVEGQNSLA 295
>gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 251 bits (640), Expect = 5e-67
Identities = 151/233 (64%), Positives = 164/233 (70%), Gaps = 29/233 (12%)
Query: 7 RGPHTPYLQG-PYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCASHR 61
RGP ++G PYLLLGEVVGHSALGAQPAQAA DE+LEL ALLQ AGR PCA+
Sbjct: 2 RGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLS 61
Query: 62 GRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQ 121
GR ITPATALLLLSHR RA+ R MQA AA+AGSPG R+GK PPSRESWT SAP+RCP Q
Sbjct: 62 GRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQ 121
Query: 122 DAGRAGSRVCRSRPQSRGG-------QKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGK 174
DA RAGS VCRSRPQSRGG QKAAA+ AK G GGK+PRRQK AAAG K+ +
Sbjct: 122 DASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEE 181
Query: 175 SH----KKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
S KKPRR GQKA G G KPQKAAAAG K PRR R+
Sbjct: 182 SRRGGGKKPRRGGQKAV-----GAGAKKPQKAAAAGTKT--------PRRRRQ 221
>gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo
sapiens]
Length = 240
Score = 242 bits (618), Expect = 2e-64
Identities = 141/232 (60%), Positives = 161/232 (69%), Gaps = 25/232 (10%)
Query: 3 LRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCA 58
L N GP YL GPYLLLGEV+GHSALGAQPAQAA DE+LELPALLQ PAG PCA
Sbjct: 6 LEPNPGPRPRYLHGPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQLPAGCDPCA 65
Query: 59 SHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRC 118
S R R+TPATALL LSHRGRA+RRSM AAAA+ S GR +GK PP+RESWTRS P+ C
Sbjct: 66 SLRDSRVTPATALLPLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRSDPRHC 125
Query: 119 PSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKK 178
SQDA R+GSRVCRSRPQ+RG GGK+ R++ AA K+ G+S KK
Sbjct: 126 ISQDASRSGSRVCRSRPQTRGS-------------GGKKLRQRGEKAAAVKTCSGRS-KK 171
Query: 179 PRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGG------GKKP-RRGRR 223
P R+ AK+ GG G KPQKAAAAGAK+ GGG GKKP RRG++
Sbjct: 172 PGRQKAAVMGAKSRGGRGKKPQKAAAAGAKSCNGGGKKLGRWGKKPGRRGQK 223
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 239 bits (610), Expect = 1e-63
Identities = 144/232 (62%), Positives = 162/232 (69%), Gaps = 26/232 (11%)
Query: 3 LRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCA 58
L + GP +PYL G YLLLGEV+GHSALGAQ AQ A DE+LELPALLQ AG PCA
Sbjct: 6 LEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCA 65
Query: 59 SHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRC 118
S R +TPATALLLLSHRG+ +RRSMQAAAA+ S GR +GK PP ES TRS P+RC
Sbjct: 66 SLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRC 125
Query: 119 PSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRR-QKPAAAGAKSRGG---- 173
SQDA R+GSRVCRSRPQ+RGG GGK+PRR QK A AGAKSRGG
Sbjct: 126 LSQDASRSGSRVCRSRPQTRGG-------------GGKKPRRGQKAATAGAKSRGGGVRS 172
Query: 174 KSHKKPRRRGQKAAP--AKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
+ KK RRRGQKAA AK+ GGGG KPQKA A GA+ R G K RRG++
Sbjct: 173 RGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRR--GWKKLRRRGKK 222
Score = 57.0 bits (136), Expect = 1e-08
Identities = 53/146 (36%), Positives = 70/146 (47%), Gaps = 35/146 (23%)
Query: 79 RAERRSMQAAAAKAGSPGRRRVGKGPPS-------RESWTRSAPQRCPSQDAG--RAGSR 129
+ RR +AAAA A S G GK P R W + + + AG +AG +
Sbjct: 177 KIRRRGQKAAAAGAKSCGGG--GKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKAGKK 234
Query: 130 VC------RSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSR------------ 171
+ R +P+ RG QKAAA+G +R K+PRRQK AA AKS
Sbjct: 235 LRQQGEKGRKKPRRRG-QKAAAAGGERC----KKPRRQKAAAVSAKSPKKPRRRVLNSAR 289
Query: 172 -GGKSHKKPRRRGQKAAPAKNSGGGG 196
G +S K P+RRGQK+ AK+ G G
Sbjct: 290 LGAESRKNPQRRGQKSMAAKSRVGSG 315
>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
sapiens]
Length = 231
Score = 239 bits (610), Expect = 1e-63
Identities = 144/232 (62%), Positives = 162/232 (69%), Gaps = 26/232 (11%)
Query: 3 LRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCA 58
L + GP +PYL G YLLLGEV+GHSALGAQ AQ A DE+LELPALLQ AG PCA
Sbjct: 6 LEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCA 65
Query: 59 SHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRC 118
S R +TPATALLLLSHRG+ +RRSMQAAAA+ S GR +GK PP ES TRS P+RC
Sbjct: 66 SLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRC 125
Query: 119 PSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRR-QKPAAAGAKSRGG---- 173
SQDA R+GSRVCRSRPQ+RGG GGK+PRR QK A AGAKSRGG
Sbjct: 126 LSQDASRSGSRVCRSRPQTRGG-------------GGKKPRRGQKAATAGAKSRGGGVRS 172
Query: 174 KSHKKPRRRGQKAAPA--KNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
+ KK RRRGQKAA A K+ GGGG KPQKA A GA+ R G K RRG++
Sbjct: 173 RGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRR--GWKKLRRRGKK 222
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 89.4 bits (220), Expect = 2e-18
Identities = 68/171 (39%), Positives = 80/171 (46%), Gaps = 34/171 (19%)
Query: 80 AERRSMQAAAAKAGSPGRRRVGKGPPS----RESWTRSAPQRCPSQDAGRAGSRVCRSRP 135
A+RR A K + GR G+GP S W R + P + +A
Sbjct: 286 AKRRGAATAGEKPAAKGRG--GRGPKSLGGQNPRWGRGGKK--PRRRGQKATKAAAAGTK 341
Query: 136 QSRGGQ-KAAASGAKRRGVG---GKEPRRQKPAAAGAKSRGGKSHK-------------- 177
+ GGQ KAA G K R GK+PRRQK +AAGAKSRGG K
Sbjct: 342 RGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKK 401
Query: 178 ----KPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGG----GGGKKPRR 220
PRRR QKA AK GGG KP++ AK+RGG GGGKKPRR
Sbjct: 402 PRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRR 452
Score = 82.0 bits (201), Expect = 4e-16
Identities = 75/213 (35%), Positives = 92/213 (43%), Gaps = 43/213 (20%)
Query: 49 QRPAGRRPCASHRG------RRITPATALLL----LSHRGRAERRSMQAAAAKAGSPGRR 98
+R A + P A RG RR P A S G+ RR Q A KA G
Sbjct: 408 RRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAE 467
Query: 99 RVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRG-GQKAAASGAKRRGVGGKE 157
G R+ + + + +G + R ++ G+KA A+GAK RG K+
Sbjct: 468 SRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRG--RKQ 525
Query: 158 PRRQKPAAAGAKSR---------------GGKSH-------------KKPRRRGQKAAPA 189
PRRQKPA AGAKSR G SH KPR+ GQ AA A
Sbjct: 526 PRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAA 585
Query: 190 KNSGGGGNKP--QKAAAAGAKNRGGGGGKKPRR 220
K GGG +P QKAAA K+R G GGKK R
Sbjct: 586 KTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWR 618
Score = 78.6 bits (192), Expect = 4e-15
Identities = 71/191 (37%), Positives = 95/191 (49%), Gaps = 27/191 (14%)
Query: 53 GRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTR 112
G++P RG++ T A A + RG ++ K+ RRR GK P +++
Sbjct: 322 GKKP--RRRGQKATKAAAAG--TKRGGGGQQKAAVVGVKSRKKQRRR-GKKPRRQKASAA 376
Query: 113 SAPQRCPS-----QDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAG 167
A R ++A R G + R Q+ + A AK RG G K+PRR+ P A
Sbjct: 377 GAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKA-- 434
Query: 168 AKSRGGKSH----KKPRRRGQKA------APAKNSGGGGNKPQKAAAAGAKNRGGG---- 213
AKSRGGKS KKPRRRGQKA A A++ G QKA+AAG K+RGGG
Sbjct: 435 AKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRGGGLKSH 494
Query: 214 -GGKKPRRGRR 223
G RRG++
Sbjct: 495 SGKNLWRRGQK 505
Score = 77.8 bits (190), Expect = 8e-15
Identities = 66/181 (36%), Positives = 83/181 (45%), Gaps = 38/181 (20%)
Query: 77 RGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAG-SRVCRSRP 135
RG ++ + A G+ RR GK P + R Q+ + R G SR +
Sbjct: 218 RGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQ----RRRGQKAATGGKSRVGKSRGGGDKK 273
Query: 136 QSRGGQKAAASGAKRRGVG--GKEPRRQKPAAAGAKSRGGKSH------KKPRRRGQKAA 187
R GQ AA +GAKRRG G++P + G KS GG++ KKPRRRGQKA
Sbjct: 274 LRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKAT 333
Query: 188 PA-----KNSGGG------------------GNKP--QKAAAAGAKNRGGGGGKKPRRGR 222
A K GGG G KP QKA+AAGAK+RGGG K R +
Sbjct: 334 KAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAK 393
Query: 223 R 223
R
Sbjct: 394 R 394
Score = 77.8 bits (190), Expect = 8e-15
Identities = 63/165 (38%), Positives = 81/165 (49%), Gaps = 28/165 (16%)
Query: 82 RRSMQAAAAKAGSPG----RRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQS 137
RR+ +A AAK G RRR K SR +RS + P + +A + + +S
Sbjct: 409 RRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAES 468
Query: 138 RGG-----QKAAASGAKRRGVGGK--------------EPRRQKPAAAGAKSRGGKSHKK 178
RG QKA+A+G K RG G K E +K AAGAKSRG K+
Sbjct: 469 RGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRG---RKQ 525
Query: 179 PRRRGQKAAPAKNSGGGGN--KPQKAAAAGAKNRGGGGGKKPRRG 221
PRR+ A AK+ GG + QKA AAGA + GGGG K+ R G
Sbjct: 526 PRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGG 570
Score = 74.3 bits (181), Expect = 8e-14
Identities = 72/202 (35%), Positives = 84/202 (41%), Gaps = 73/202 (36%)
Query: 79 RAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRS-----APQRCPSQDAGRAGSRVCRS 133
R R+ QAA R G G P + R+ A P+ A AG ++ S
Sbjct: 4 RGHRQCNQAAG---------RAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGS 54
Query: 134 RPQSRGGQKAAASGAKRR------GVGGKEPRR------------------QKPAAAGAK 169
+ QKAAA G K R V GKE R+ QK AAAG K
Sbjct: 55 GDKKLRRQKAAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTK 114
Query: 170 SRGGKSHKKPRRRGQKAAP-----------------AKNSGG--------------GGNK 198
S GG+ +KPRRRGQKAA +KN G GG K
Sbjct: 115 SLGGRG-RKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEK 173
Query: 199 PQKAAAAGAKNRGGGGGKKPRR 220
PQKAAAAGAK+R GKKPRR
Sbjct: 174 PQKAAAAGAKSR---SGKKPRR 192
Score = 72.4 bits (176), Expect = 3e-13
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 31/165 (18%)
Query: 76 HRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRP 135
+RG E+++ A G GR+ +G + + T S R +Q + AGS+
Sbjct: 100 NRGGGEQKAAAAGTKSLGGRGRKPRRRG--QKAAATGSKKPRWRAQKSAAAGSK-----N 152
Query: 136 QSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGG- 194
+ G QKAAA+ A + GG++P QK AAAGAKSR GK KPRRRG K+ ++ G
Sbjct: 153 RGAGAQKAAAA-AGVKSQGGEKP--QKAAAAGAKSRSGK---KPRRRGAKSRGDEDKKGR 206
Query: 195 ------------GGNKPQ----KAAAAGAKNRGGGGGKKPRRGRR 223
GG + + K AA GAK+R GGG KKP++ RR
Sbjct: 207 QREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGG-KKPQKQRR 250
Score = 70.9 bits (172), Expect = 9e-13
Identities = 67/185 (36%), Positives = 84/185 (45%), Gaps = 29/185 (15%)
Query: 58 ASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQR 117
+ +RG A A + +G + + AA AK+ S G++ +G SR + QR
Sbjct: 150 SKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRS-GKKPRRRGAKSRGDEDKKGRQR 208
Query: 118 CPSQDAG--RAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQK----PAAAGAKSR 171
G R G R RP K AA GAK R GGK+P++Q+ AA G KSR
Sbjct: 209 EAKSRFGKTRGGRRKKHRRP------KPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSR 262
Query: 172 GGKSH----KKPRRRGQKAAPA-KNSGGGGNKPQKAAAAGAKNRG-----------GGGG 215
GKS KK RR+GQ AA A G +K AA G RG G GG
Sbjct: 263 VGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGG 322
Query: 216 KKPRR 220
KKPRR
Sbjct: 323 KKPRR 327
Score = 70.5 bits (171), Expect = 1e-12
Identities = 58/174 (33%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 62 GRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPS- 120
G + A L RGR RR Q AAA R R K + + Q+ +
Sbjct: 104 GEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAA 163
Query: 121 ----QDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSH 176
G + + +SR G+K GAK RG K+ R+++ + K+RGG+
Sbjct: 164 AGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGR-R 222
Query: 177 KKPRRRGQKAAPAKNSGGGGNKPQK------AAAAGAKNR----GGGGGKKPRR 220
KK RR A AK+ GGG KPQK AA G K+R GGG KK RR
Sbjct: 223 KKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRR 276
Score = 68.9 bits (167), Expect = 3e-12
Identities = 69/228 (30%), Positives = 100/228 (43%), Gaps = 57/228 (25%)
Query: 49 QRPA---GRRPCASHRGRRITPATALLLLSHRGRAERRS------------MQAAAAKAG 93
Q+PA + + R+ A A SH G ++S AAAAK
Sbjct: 529 QKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTR 588
Query: 94 SPGRRRVGKGPPSR---ESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRG------GQKAA 144
G ++ G + +S + ++ Q A G++ R +P RG +KA
Sbjct: 589 GGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAK-SRKKPWRRGQKDAAAAEKAW 647
Query: 145 ASGAKRRGVGGKEPRRQKPAAAGAKS-------RGGKSHKKPR----------------- 180
A+GA RG GGK+PR QKPAAAG++S + ++ KKPR
Sbjct: 648 ATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVG 707
Query: 181 -----RRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
RRG+K K+ GGGG K + + GAK+RG GG K R G++
Sbjct: 708 INPWQRRGKKPRLGKSRGGGGAKSR--GSGGAKSRGSGGAKS-RSGKK 752
Score = 65.9 bits (159), Expect = 3e-11
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 143 AAASGAKRRGVGGKEPRRQKPAAAGAKSR-----GGKSHKKPRRRGQKAAPAKNSGGGGN 197
AAA+G K G G K+ RRQK AA G K+R G + K+ R+ QKAA A + G
Sbjct: 44 AAAAGVKILGSGDKKLRRQKAAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGG 103
Query: 198 KPQKAAAAGAKNRGGGGGKKPRRGRR 223
QKAAAAG K+ GG G K RRG++
Sbjct: 104 GEQKAAAAGTKSLGGRGRKPRRRGQK 129
Score = 64.7 bits (156), Expect = 7e-11
Identities = 67/199 (33%), Positives = 93/199 (46%), Gaps = 37/199 (18%)
Query: 49 QRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
QR G++P R ++ + A A RG +++ ++ A K GR++ P R
Sbjct: 361 QRRRGKKP----RRQKASAAGA----KSRGGGDKKGLREA--KRRGDGRKKPRWQNPRRR 410
Query: 109 SWTRSA--PQRCPSQDAGRAGSRVCRSR---PQSRGGQKAAASGAKRR---------GVG 154
+ A P+ S+ R G + +SR +S GG+K G K R G
Sbjct: 411 AQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRG 470
Query: 155 GKEPRRQKPAAAGAKSRGG--KSH--KKPRRRGQK---------AAPAKNSGGGGNKPQK 201
K+ RQK +AAG KSRGG KSH K RRGQK AA AK+ G + QK
Sbjct: 471 DKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQK 530
Query: 202 AAAAGAKNRGGGGGKKPRR 220
A AGAK+R GG + R+
Sbjct: 531 PAVAGAKSRVGGSKSRQRQ 549
Score = 58.5 bits (140), Expect = 5e-09
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 29/201 (14%)
Query: 31 GAQPAQAADEVLELPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAA 90
G + A AA++ A + G++P + ++A + A ++ + A
Sbjct: 636 GQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAK 695
Query: 91 KAGSPGRRR-VGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAK 149
G G+ VG P W R + + G G++ SRG + GAK
Sbjct: 696 SRGDGGQNAAVGINP-----WQRRGKKPRLGKSRGGGGAK-------SRG-----SGGAK 738
Query: 150 RRGVGGKEPRRQKPAAAGAKSRGGKSHKKPR------RRGQKAAPA---KNSGGGGNKPQ 200
RG GG + R K AAA +KS GG K+ R R G+KA A K + GG KP
Sbjct: 739 SRGSGGAKSRSGKKAAA-SKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPP 797
Query: 201 KAAAAGAK-NRGGGGGKKPRR 220
+ + G + + GGKKP R
Sbjct: 798 RVKSRGGRGQKAAAGGKKPLR 818
Score = 43.1 bits (100), Expect = 2e-04
Identities = 56/177 (31%), Positives = 77/177 (43%), Gaps = 32/177 (18%)
Query: 28 SALGAQPAQAADEVLELPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAER--RSM 85
+A G++ + AA E A ++P RR + G + A + RG+ R +S
Sbjct: 667 AAAGSESSAAAAVGQEAEAR-KKPRRRRAKSRGDGGQ-NAAVGINPWQRRGKKPRLGKSR 724
Query: 86 QAAAAKA-GSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSR-PQSRGGQKA 143
AK+ GS G + G G +RS + S+ G G++ R +SR G+KA
Sbjct: 725 GGGGAKSRGSGGAKSRGSGGAK----SRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKA 780
Query: 144 A-ASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKP 199
A G K GGK+P R KSRGG RGQKAA GG KP
Sbjct: 781 VTAGGQKAAAAGGKKPPR-------VKSRGG--------RGQKAA------AGGKKP 816
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 52.0 bits (123), Expect = 4e-07
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 32/187 (17%)
Query: 51 PAGRR--PCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
P GRR P + RG + P + L RG R A+ +AG RR P R
Sbjct: 163 PGGRRGRPLGAARGTGLNPGLSPRLQEPRGHQSARRTDTAS-RAGWATRR----APSRRR 217
Query: 109 SWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGA 168
++ R DAG+ P++ GG+ A+GA+R G+ PR + P AG
Sbjct: 218 NFGAPRGSRRLRPDAGKF--------PEASGGKGQRAAGAERVLNNGRGPRSRLPGLAGG 269
Query: 169 ---------KSRGGKSHKKPR--RRGQKAAPAKNSGG------GGNKPQKAAAAGAKNRG 211
++ G S P+ R G A P + G P A A A+ RG
Sbjct: 270 VEPPGWSRERAGAGLSRDSPQVPRSGSWARPCREQGHPAVLALQSPAPPSLARAAARRRG 329
Query: 212 GGGGKKP 218
GG +P
Sbjct: 330 PGGATEP 336
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 52.0 bits (123), Expect = 4e-07
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 32/187 (17%)
Query: 51 PAGRR--PCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
P GRR P + RG + P + L RG R A+ +AG RR P R
Sbjct: 163 PGGRRGRPLGAARGTGLNPGLSPRLQEPRGHQSARRTDTAS-RAGWATRR----APSRRR 217
Query: 109 SWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGA 168
++ R DAG+ P++ GG+ A+GA+R G+ PR + P AG
Sbjct: 218 NFGAPRGSRRLRPDAGKF--------PEASGGKGQRAAGAERVLDNGRGPRSRLPGLAGG 269
Query: 169 ---------KSRGGKSHKKPR--RRGQKAAPAKNSGG------GGNKPQKAAAAGAKNRG 211
++ G S P+ R G A P + G P A A A+ RG
Sbjct: 270 VEPPGWSRERAGAGLSRDSPQVPRSGSWARPCREQGHPAVLALQSPAPPSLARAAARRRG 329
Query: 212 GGGGKKP 218
GG +P
Sbjct: 330 PGGATEP 336
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 52.0 bits (123), Expect = 4e-07
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 32/187 (17%)
Query: 51 PAGRR--PCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
P GRR P + RG + P + L RG R A+ +AG RR P R
Sbjct: 163 PGGRRGRPLGAARGTGLNPGLSPRLQEPRGHQSARRTDTAS-RAGWATRR----APSRRR 217
Query: 109 SWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGA 168
++ R DAG+ P++ GG+ A+GA+R G+ PR + P AG
Sbjct: 218 NFGAPRGSRRLRPDAGKF--------PEASGGKGQRAAGAERVLDNGRGPRSRLPGLAGG 269
Query: 169 ---------KSRGGKSHKKPR--RRGQKAAPAKNSGG------GGNKPQKAAAAGAKNRG 211
++ G S P+ R G A P + G P A A A+ RG
Sbjct: 270 VEPPGWSRERAGAGLSRDSPQVPRSGSWARPCREQGHPAVLALQSPAPPSLARAAARRRG 329
Query: 212 GGGGKKP 218
GG +P
Sbjct: 330 PGGATEP 336
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 51.6 bits (122), Expect = 6e-07
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 79 RAERRSMQAAAAKAGSPGRRRVGKGPPSR-ESWTRSAPQRCPSQDAGRAGSRVCRSRPQS 137
R +RS +A A + S G + P S +S + R P A + R RSR +S
Sbjct: 521 RERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRS 580
Query: 138 RGGQKAAASGAKRRGVG------GKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKN 191
R ++ + S +RRG K RR++ A+ + S ++ R RG+ ++
Sbjct: 581 RSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKH----RD 636
Query: 192 SGGGGNKPQKAAAAGAKNRGGGGGKKP 218
GG K +++ + G K G G K P
Sbjct: 637 GGGSKKKKKRSRSRGEKRSGDGSEKAP 663
Score = 35.8 bits (81), Expect = 0.033
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 32/169 (18%)
Query: 28 SALGAQPAQAADEVLELPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQA 87
S+ G QPA A PA HR R P + + R R ++
Sbjct: 535 SSSGTQPAPPA------------PASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRS 582
Query: 88 AAAKAGSPGRRRVGKGPPSRESWTRSAPQR------CPSQDAGRAGSRVCRSRPQSRGG- 140
++ S RRR G SR S +R +R P + + SR R R + R G
Sbjct: 583 TRRRSRSTDRRRGG----SRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGG 638
Query: 141 ------QKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRG 183
+++ + G KR G G ++ P +G+ S G + RRRG
Sbjct: 639 GSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGSTSCGDRD---SRRRG 684
Score = 34.3 bits (77), Expect = 0.095
Identities = 42/167 (25%), Positives = 63/167 (37%), Gaps = 34/167 (20%)
Query: 81 ERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRC---------------------- 118
+R S +A K +P K P S S + S+ C
Sbjct: 789 DRSSKKARPPKESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVAVLIREGVSST 848
Query: 119 -PSQDAGRAG--------SRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQK-PAAAGA 168
P++DA AG SR SR + A + + G +P++ K A AGA
Sbjct: 849 TPAKDAASAGLGSIGVKFSRDRESRSPFLKPDERAPTEMAKAAPGSTKPKKTKVKAKAGA 908
Query: 169 K-SRGGKSHKKPRRRGQKAAPAKNSGG-GGNKPQKAAAAGAKNRGGG 213
K ++G K KP + +K SGG GG K + A + ++ G
Sbjct: 909 KKTKGTKGKTKPSKTRKKVRSGGGSGGSGGQVSLKKSKADSCSQAAG 955
Score = 33.5 bits (75), Expect = 0.16
Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 28/189 (14%)
Query: 49 QRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
+R RR + + RR + + + + RR + G +++ + E
Sbjct: 593 RRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGE 652
Query: 109 SWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAAS---------GAKRRGVGGK--- 156
+ ++ P+ +GS C R R G + KR G+
Sbjct: 653 KRSGDGSEKAPAPAPPPSGSTSCGDRDSRRRGAVPPSIQDLTDHDLFAIKRTITVGRLDK 712
Query: 157 -EPRRQKPAAAGA--------------KSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQK 201
+PR PA A + + RGGKS +K RRR A+ + +S G++ +K
Sbjct: 713 SDPRGPSPAPASSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSSREKGSR-RK 771
Query: 202 AAAAGAKNR 210
A G ++R
Sbjct: 772 ALDGGDRDR 780
Score = 31.6 bits (70), Expect = 0.62
Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 17/170 (10%)
Query: 36 QAADEVLELPALLQRPAGRRPCASHRGRR--ITPATALLLLSHRGRAERRSMQAAAAKAG 93
++ D + PA P+G C RR P + L H A +R++
Sbjct: 654 RSGDGSEKAPAPAPPPSGSTSCGDRDSRRRGAVPPSIQDLTDHDLFAIKRTITVGRLDKS 713
Query: 94 SPGRRRVGKGPPSRESWTRSAPQRCPSQDA-GRAGS-RVCRSRPQSRGGQKAAASGAKRR 151
P +GP + S+P+R D+ G +G R +S + R AA+S + R
Sbjct: 714 DP------RGPSPAPA---SSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSSR 764
Query: 152 GVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQK 201
G R+K G + R + R +KA P K S P K
Sbjct: 765 EKGS----RRKALDGGDRDRDRDRDRDRDRSSKKARPPKESAPSSGPPPK 810
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 50.4 bits (119), Expect = 1e-06
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 16/149 (10%)
Query: 51 PAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESW 110
P+ + A R T A HR +R+ +Q AG G+RR
Sbjct: 163 PSADQQRAQDREEEATAAPVPTSSGHRTE-KRKRLQLQCQPAGGTGQRR----------G 211
Query: 111 TRSAPQRCPSQDAG-RAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAK 169
+RS+P R P+ G R GSR S Q R + + +R G +R+ AAA
Sbjct: 212 SRSSPSRQPAGGTGQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQRRGTAAAPVP 271
Query: 170 SRGGKSHKKPRRRGQKAAPAKNSGGGGNK 198
+ GG +RRG AAPA S G G +
Sbjct: 272 TTGGTG----QRRGTAAAPAPTSTGTGQR 296
Score = 35.8 bits (81), Expect = 0.033
Identities = 50/200 (25%), Positives = 74/200 (37%), Gaps = 39/200 (19%)
Query: 49 QRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGP---- 104
+RPAG RG R + + +G +R AAA S G R + P
Sbjct: 94 RRPAGGT--GQRRGSRSSSSA-----DQQGAQDREEEAAAAPAPTSSGHRTEKRKPQQPQ 146
Query: 105 --PSRESWTRSAPQRCPSQDAGRAGSR----VCRSRPQSRGG------------QKAAAS 146
P+ + R PS D RA R P S G Q A +
Sbjct: 147 CRPAAGTGQRRGSGCSPSADQQRAQDREEEATAAPVPTSSGHRTEKRKRLQLQCQPAGGT 206
Query: 147 GAKRRGVGGKEPRRQKPAAAGAKSRGGKS-----HKKPRRRGQKAAPAKNSGGGGNKPQK 201
G +R G + ++PA + RG +S ++ + R ++AA + GG ++
Sbjct: 207 GQRR---GSRSSPSRQPAGGTGQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQRR 263
Query: 202 AAAAGAKNRGGGGGKKPRRG 221
AA GG G+ RRG
Sbjct: 264 GTAAAPVPTTGGTGQ--RRG 281
Score = 34.7 bits (78), Expect = 0.073
Identities = 38/144 (26%), Positives = 53/144 (36%), Gaps = 28/144 (19%)
Query: 82 RRSMQAAAAKAGSPGRRRVGKGPPS--------RESWTRSAPQRCPSQDAGRAGSRVCRS 133
R Q AG G+RR PS RE +AP P+ R R +
Sbjct: 34 RPQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAP--APTSRGHRTEKRKPQQ 91
Query: 134 ---RPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAK 190
RP GQ+ + + G + R ++ AAA A + G H+ +R+ Q
Sbjct: 92 PQRRPAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSG--HRTEKRKPQ------ 143
Query: 191 NSGGGGNKPQKAAAAGAKNRGGGG 214
+PQ AAG R G G
Sbjct: 144 -------QPQCRPAAGTGQRRGSG 160
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 50.1 bits (118), Expect = 2e-06
Identities = 54/184 (29%), Positives = 71/184 (38%), Gaps = 22/184 (11%)
Query: 25 VGHSALGAQPAQAADEVLELP-ALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERR 83
+ +G QP +EV L A L G+RP R R A G A R
Sbjct: 14 LSRETIGVQPGWGGEEVQGLARAGLATGKGQRPPGPGRVR-----AAQARARRGGGARER 68
Query: 84 SMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPS--QDAGRAGS---RVCRSRPQSR 138
+ A + G R G R + T A + P ++A AGS R CR P+S
Sbjct: 69 PAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSH 128
Query: 139 GGQ--------KAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAK 190
G +A G + GG+ P R++ AAA A GG P RRG+ A
Sbjct: 129 GQPFPQLRSHWQAPRQGWPAQEGGGRRPSRREEAAALA---GGGKRTAPGRRGRGGRAAA 185
Query: 191 NSGG 194
GG
Sbjct: 186 GQGG 189
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 48.9 bits (115), Expect = 4e-06
Identities = 49/184 (26%), Positives = 74/184 (40%), Gaps = 15/184 (8%)
Query: 34 PAQAADEVLELPALLQRPAGRRPCASHRGRRITPA---TALLLLSHRGRAERRSMQAAAA 90
PA PA R R P A R R TP + + RGR+ R+ +
Sbjct: 567 PATRGRSRSRTPARRGRSRSRTP-ARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRS 625
Query: 91 KAGSPGRRRVGKGPPSRESW-TRSAPQRCPSQDAGRAGSRVCRSR---PQSRGGQKAAAS 146
+ SP RRR P+R S +RS + R +R RSR P R G+ + +
Sbjct: 626 RTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRT 685
Query: 147 GAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAG 206
A+R + PRR + + RG + P+RRG+ SG + K+ +
Sbjct: 686 PARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR-------SGSSSERKNKSRTSQ 738
Query: 207 AKNR 210
++R
Sbjct: 739 RRSR 742
Score = 46.6 bits (109), Expect = 2e-05
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 15/182 (8%)
Query: 53 GRRPCASHRGRRITPATALLLLSH--RGRAERRSMQAAAAKAGSPGRR-RVGKGPPSRES 109
GR RGR +P S + R RS + + + SP R R P+R
Sbjct: 523 GRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRG 582
Query: 110 WTRSAPQRCPSQDAGRAGS---RVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAA 166
+RS R P++ R+ + R RSR +R G+ + + A+RR RR+ + +
Sbjct: 583 RSRS---RTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRS 639
Query: 167 GAKSRGGKSHKKPRRRGQKAA--PAKNSGGGGNKPQKAAAAGAK----NRGGGGGKKPRR 220
A+ G + P RRG+ + PA+ P + + RG + PRR
Sbjct: 640 PARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRR 699
Query: 221 GR 222
GR
Sbjct: 700 GR 701
Score = 43.1 bits (100), Expect = 2e-04
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 28/188 (14%)
Query: 62 GRRITPATALLLLSH------RGRAERRSMQAAAAKAG-------SPGRRRVGKGPPSRE 108
GR +PATA S RG + RS Q +++ SP RR + P R
Sbjct: 482 GRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSP-QRP 540
Query: 109 SWTRSAPQ----RCPSQDAGRAGSRV------CRSRPQSRGGQKAAASGAKRRGVGGKEP 158
W+RS R S GR+ SR RSR +R G+ + + A+RR
Sbjct: 541 GWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPT 600
Query: 159 RRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAK---NRGGGGG 215
RR+ + A+ +S RRR + +P + + +++ + ++ RG
Sbjct: 601 RRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRS 660
Query: 216 KKP-RRGR 222
+ P RRGR
Sbjct: 661 RTPARRGR 668
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 26/156 (16%)
Query: 49 QRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRR--RVGKGPPS 106
+R R P R R TPA R R+ RS +++ SP RR R P+
Sbjct: 602 RRSRSRTPARRGRSRSRTPA--------RRRSRTRSPVRRRSRSRSPARRSGRSRSRTPA 653
Query: 107 RESWTRS--------APQRCPSQDAGRAGSRV------CRSRPQSRGGQKAAASGAKRRG 152
R +RS + R P++ +GR+ SR RSR RG ++ + RRG
Sbjct: 654 RRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRG--RSRSRSLVRRG 711
Query: 153 VGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAP 188
+++ + + R KS RR ++P
Sbjct: 712 RSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSP 747
Score = 38.1 bits (87), Expect = 0.007
Identities = 43/175 (24%), Positives = 61/175 (34%), Gaps = 30/175 (17%)
Query: 79 RAERRSMQAAAAKAGSP---------GRRRVGKGP-PSRESWTRSAPQRCPSQDAGRAGS 128
RA+ S + KA +P G G+GP P S T S+P+ P R GS
Sbjct: 1613 RAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGS 1672
Query: 129 RVC-------RSRPQSRGGQ-------KAAASGAKRRGVGGKE------PRRQKPAAAGA 168
R R+ P+ R + KA S R E PR ++ + +
Sbjct: 1673 RSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSS 1732
Query: 169 KSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
KS RRR + K + G P ++R +K R RR
Sbjct: 1733 PEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRR 1787
Score = 38.1 bits (87), Expect = 0.007
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 64 RITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSR---ESWTRSAPQRC-P 119
R +P+ + + + R+ RR A++ + + RR P R S +RS ++
Sbjct: 1725 RRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRT 1784
Query: 120 SQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVG--GKEPRRQKPAAAGAKSRGGKSHK 177
++ R+GS SR + R ++ + +R G G + P RQ+ + ++ R G+S
Sbjct: 1785 TRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRT 1844
Query: 178 KP---RRRGQKAAPA 189
P +R + +PA
Sbjct: 1845 PPTSRKRSRSRTSPA 1859
Score = 35.0 bits (79), Expect = 0.056
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 15/140 (10%)
Query: 94 SPGRRRVGKGPPSRESWTRSAPQRCPSQDAG-RAGSRVCRSRPQ-SRGGQKAAASGAKRR 151
SP R R G P ++ R+AP+ D+ + R+ P+ SR G + G
Sbjct: 1592 SPRRSRSGSSPEVKDK-PRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPE 1650
Query: 152 GVGGKEPRRQKPAAAGAKSRGGKSHKK--------PRRRGQKAAPAKNSGGGGNKPQKAA 203
G E + P + RG +S + PRRR +++P ++ ++A
Sbjct: 1651 GSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSA 1710
Query: 204 AAGAKNRGGGGGKKPRRGRR 223
++ + R + P R RR
Sbjct: 1711 SSSPETR----SRTPPRHRR 1726
Score = 35.0 bits (79), Expect = 0.056
Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 4/156 (2%)
Query: 59 SHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRC 118
+ RG R +P + R RS KA R R P S T +R
Sbjct: 1668 ARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRS 1727
Query: 119 PSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKK 178
PS + + SR SR + A++ K G+ P + ++SR + +
Sbjct: 1728 PSVSSPEPAEK---SR-SSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTR 1783
Query: 179 PRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGG 214
RR ++ ++++ + + + + RGG G
Sbjct: 1784 TTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSG 1819
Score = 34.7 bits (78), Expect = 0.073
Identities = 48/204 (23%), Positives = 72/204 (35%), Gaps = 31/204 (15%)
Query: 27 HSALGAQPAQAADEVLELPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQ 86
HS G+ P ++P R GR C S + P T R R+ S
Sbjct: 1457 HSLSGSSPGMK-----DIPRTPSR--GRSECDSSPEPKALPQTP------RPRSRSPSSP 1503
Query: 87 AAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGS-RVCRSRPQSRGGQKAAA 145
K +P R R G S S + R P R+GS + +P + +++ +
Sbjct: 1504 ELNNKCLTPQRERSG----SESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSES 1559
Query: 146 SGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQ----------KAAPAKNSGGG 195
+ + P RQ+ + + KS PRR +AAP SG
Sbjct: 1560 DSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSD 1619
Query: 196 GNKPQKAAAAGA---KNRGGGGGK 216
+ KA A A ++R G K
Sbjct: 1620 SSPEPKAPAPRALPRRSRSGSSSK 1643
Score = 31.2 bits (69), Expect = 0.81
Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 31/180 (17%)
Query: 52 AGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWT 111
+G PC + + TP S + +A+ R+ + + SP ++ K PSR+S +
Sbjct: 780 SGSSPCPKQKSQ--TPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSK-TPSRQSHS 836
Query: 112 RSAPQ-RCPSQDAGRAGS---------------RVC-RSRP----QSRGGQKAAASGAKR 150
S+P + S R GS R C S P +SR + + SG+
Sbjct: 837 SSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSP 896
Query: 151 RGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNR 210
V P RQ P+ + + K+ PR+R +SG P + + R
Sbjct: 897 PRVKSSTPPRQSPSRSSSPQPKVKAIISPRQR-------SHSGSSSPSPSRVTSRTTPRR 949
Score = 28.9 bits (63), Expect = 4.0
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 28/144 (19%)
Query: 92 AGSPGRRRVGKGPPSRESWTRSAPQR------CPSQDAGRAGSRVC------RSRPQSRG 139
A +PG R P+ ++ + +R PS+ GR+ S RSR ++
Sbjct: 444 APAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKR 503
Query: 140 GQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKP 199
G + S RR + + R G+S + P+RRG+ +P +
Sbjct: 504 GHSRSRSPQWRR--------------SRSAQRWGRS-RSPQRRGRSRSPQRPGWSRSRNT 548
Query: 200 QKAAAAGAKNRGGGGGKKP-RRGR 222
Q+ + + RG + P RGR
Sbjct: 549 QRRGRSRSARRGRSHSRSPATRGR 572
Score = 27.7 bits (60), Expect = 8.9
Identities = 36/147 (24%), Positives = 53/147 (36%), Gaps = 20/147 (13%)
Query: 90 AKAGSPGRRRVGKGPPSRESWTRSAP-----QRCPSQDAGRAGSR------VCRSRPQSR 138
+++GS R G G PSR S + S+P R PS+ S RP+SR
Sbjct: 1439 SRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSR 1498
Query: 139 GGQKAAASG----AKRRGVGGKEPRRQKPAA---AGAKSRGGKSHKKPRRRGQKAAPAKN 191
+ +R G + QK A G +SR G S + + A+P +
Sbjct: 1499 SPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVK--PSASPQER 1556
Query: 192 SGGGGNKPQKAAAAGAKNRGGGGGKKP 218
S + KA + G P
Sbjct: 1557 SESDSSPDSKAKTRTPLRQRSRSGSSP 1583
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 48.5 bits (114), Expect = 5e-06
Identities = 65/219 (29%), Positives = 82/219 (37%), Gaps = 23/219 (10%)
Query: 21 LGEVVGHSALGAQPAQAADEVLELPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRA 80
LG V +A GAQ A A VL G R + G + A + R RA
Sbjct: 796 LGRVASVAAEGAQVAWAG-AVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRA 854
Query: 81 ERRSMQA-AAAKAGSPGRRRVGKGPPSRESWTRSAP--QRCPSQDAGRAGSRVCRSRPQS 137
RR + A A A AG G G G R A QR P + + Q
Sbjct: 855 GRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQ- 913
Query: 138 RGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSR-------GGKSHKKP-----RRRGQK 185
G +AA A R G G R +P A G +SR G +H RR G +
Sbjct: 914 --GVRAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAALGRRRGGGQ 971
Query: 186 AAPAKNSG----GGGNKPQKAAAAGAKNRGGGGGKKPRR 220
A A+ + GG Q AA A + G G++PRR
Sbjct: 972 AVGARAAHQARLAGGQVDQVVVAARAGDADGVRGRRPRR 1010
Score = 31.2 bits (69), Expect = 0.81
Identities = 57/242 (23%), Positives = 75/242 (30%), Gaps = 61/242 (25%)
Query: 24 VVGHSALGAQPAQAADEVLELPALLQRPAGRRPCASHRGRR------------------- 64
V+ H+ QP Q PA L + A R A GRR
Sbjct: 411 VLVHAGQAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLA 470
Query: 65 -----ITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCP 119
+ T LL + G A + A A G G G+G + +AP+R P
Sbjct: 471 GPWRGLRLQTLLLQDAPHGGAHEHVLVAVPA-TGVGGLVGAGQGAVAAAG---NAPERLP 526
Query: 120 S--QDAGRAGSRVCRSRPQSRGGQKAAASGAK-----RRGVGGKEPRRQKPAAAG----- 167
+ Q G R R + G + G + G G P P G
Sbjct: 527 AGVQGCGEEVGRGARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGALGG 586
Query: 168 --------------AKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGG 213
A+ RGG ++PRRR GGGG P G + GG
Sbjct: 587 RAGLVAAPARRECPARRRGGCWPRRPRRR-------HGGGGGGGGPGLQDLLGGGHAGGA 639
Query: 214 GG 215
G
Sbjct: 640 HG 641
Score = 29.6 bits (65), Expect = 2.3
Identities = 42/158 (26%), Positives = 57/158 (36%), Gaps = 27/158 (17%)
Query: 104 PPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKE------ 157
PP+R++ + S P+R + R +R R + + + +ASG++ G E
Sbjct: 13 PPTRKT-SHSTPRRMFLASSLREENRAARRKTKQGASARLSASGSRSPKSGSSETQEAPS 71
Query: 158 -PRRQKPAAAGAKS-----RGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAA----GA 207
PR P A AK GG + + G G P AA A A
Sbjct: 72 APRPSFPPDAKAKGLLTFHDGGLLQVVGQEVNAGVGVGRGQGTGTRPPAPAAGAADAHSA 131
Query: 208 KNRGGGGGKKP---------RRGRRL-LGLLPCLWPRV 235
G P RR RRL LG P L P V
Sbjct: 132 DETPEASGPAPGALVSRLRKRRRRRLRLGWQPGLLPHV 169
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 48.5 bits (114), Expect = 5e-06
Identities = 65/219 (29%), Positives = 82/219 (37%), Gaps = 23/219 (10%)
Query: 21 LGEVVGHSALGAQPAQAADEVLELPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRA 80
LG V +A GAQ A A VL G R + G + A + R RA
Sbjct: 796 LGRVASVAAEGAQVAWAG-AVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRA 854
Query: 81 ERRSMQA-AAAKAGSPGRRRVGKGPPSRESWTRSAP--QRCPSQDAGRAGSRVCRSRPQS 137
RR + A A A AG G G G R A QR P + + Q
Sbjct: 855 GRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQ- 913
Query: 138 RGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSR-------GGKSHKKP-----RRRGQK 185
G +AA A R G G R +P A G +SR G +H RR G +
Sbjct: 914 --GVRAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAALGRRRGGGQ 971
Query: 186 AAPAKNSG----GGGNKPQKAAAAGAKNRGGGGGKKPRR 220
A A+ + GG Q AA A + G G++PRR
Sbjct: 972 AVGARAAHQARLAGGQVDQVVVAARAGDADGVRGRRPRR 1010
Score = 31.2 bits (69), Expect = 0.81
Identities = 57/242 (23%), Positives = 75/242 (30%), Gaps = 61/242 (25%)
Query: 24 VVGHSALGAQPAQAADEVLELPALLQRPAGRRPCASHRGRR------------------- 64
V+ H+ QP Q PA L + A R A GRR
Sbjct: 411 VLVHAGQAGQPLQGQARGPHRPAALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLA 470
Query: 65 -----ITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCP 119
+ T LL + G A + A A G G G+G + +AP+R P
Sbjct: 471 GPWRGLRLQTLLLQDAPHGGAHEHVLVAVPA-TGVGGLVGAGQGAVAAAG---NAPERLP 526
Query: 120 S--QDAGRAGSRVCRSRPQSRGGQKAAASGAK-----RRGVGGKEPRRQKPAAAG----- 167
+ Q G R R + G + G + G G P P G
Sbjct: 527 AGVQGCGEEVGRGARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGALGG 586
Query: 168 --------------AKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGG 213
A+ RGG ++PRRR GGGG P G + GG
Sbjct: 587 RAGLVAAPARRECPARRRGGCWPRRPRRR-------HGGGGGGGGPGLQDLLGGGHAGGA 639
Query: 214 GG 215
G
Sbjct: 640 HG 641
Score = 28.5 bits (62), Expect = 5.2
Identities = 41/158 (25%), Positives = 57/158 (36%), Gaps = 27/158 (17%)
Query: 104 PPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKE------ 157
PP+R++ + S P+R + + +R R + + + +ASG++ G E
Sbjct: 13 PPTRKT-SHSTPRRMFLASSLKEENRAARRKTKQGASARLSASGSRSPKSGSSETQEAPS 71
Query: 158 -PRRQKPAAAGAKS-----RGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAA----GA 207
PR P A AK GG + + G G P AA A A
Sbjct: 72 APRPSFPPDAKAKGLLTFHDGGLLQVVGQEVNAGVGVGRGQGTGTRPPAPAAGAADAHSA 131
Query: 208 KNRGGGGGKKP---------RRGRRL-LGLLPCLWPRV 235
G P RR RRL LG P L P V
Sbjct: 132 DETPEASGPAPGALVSRLRKRRRRRLRLGWQPGLLPHV 169
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 47.8 bits (112), Expect = 8e-06
Identities = 62/213 (29%), Positives = 82/213 (38%), Gaps = 42/213 (19%)
Query: 25 VGHSALGAQPAQAADEVLELP-ALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERR 83
+ +G QP +EV L A L G+RP R R A G A R
Sbjct: 14 LSRETIGVQPGWGGEEVQGLARAGLAAGKGQRPPGPGRVR-----AAQARARRGGGARER 68
Query: 84 SMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPS--QDAGRAGS---RVCRSRPQSR 138
+ A + G R G R + T A + P ++A AGS R CR P+S
Sbjct: 69 PAEGARGPRAARGGARAGPDAQLRAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSH 128
Query: 139 GGQ--------KAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAK 190
G +A G + GG+ P R++ AAA A GG G++ AP
Sbjct: 129 GQPFPQLRSHWQAPRQGWPAQEGGGRRPSRREEAAALA---GG---------GKRTAPGL 176
Query: 191 NSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
GG +AAA G GG + P R RR
Sbjct: 177 RGRGG-----RAAA------GQGGDRHPDRWRR 198
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 46.2 bits (108), Expect = 2e-05
Identities = 42/146 (28%), Positives = 60/146 (41%), Gaps = 13/146 (8%)
Query: 84 SMQAAAAKAGSPGRRRVGKGPPSRES--WTRSAPQRCPSQDAGRAGSRVCRSRP--QSRG 139
S Q + A G PG PS S A P+ A S RS P Q RG
Sbjct: 317 SGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRG 376
Query: 140 GQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKP------RRRGQKAAPAKNSG 193
G+ A +G +RR + RR+ ++A A R G+ +P R +A + +SG
Sbjct: 377 GRAAGGAGRRRR---RRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSG 433
Query: 194 GGGNKPQKAAAAGAKNRGGGGGKKPR 219
G P G++ GG GK+ +
Sbjct: 434 SGRGAPGPGPEPGSERGHGGHGKRAK 459
Score = 40.0 bits (92), Expect = 0.002
Identities = 51/200 (25%), Positives = 70/200 (35%), Gaps = 37/200 (18%)
Query: 45 PALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGP 104
PA + R S +GR A R R RRS +A+A GRRR P
Sbjct: 357 PARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRR-GRRRPRPAP 415
Query: 105 PSRESWTRSAPQRCPSQDAG-----------------------RAGSRVCRSRPQSRG-- 139
P S RS + S D+G RA R R+RP S
Sbjct: 416 PRGSS--RSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPS 473
Query: 140 ----GQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAK----- 190
G++ G G PR + + +KSR + K+P + +P K
Sbjct: 474 PGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRD 533
Query: 191 NSGGGGNKPQKAAAAGAKNR 210
G G + +A A A+ R
Sbjct: 534 KDGEGRARHSEAEATRARRR 553
Score = 39.7 bits (91), Expect = 0.002
Identities = 49/192 (25%), Positives = 74/192 (38%), Gaps = 25/192 (13%)
Query: 45 PALLQRPAGRRPCASHRGRRI-TPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKG 103
P + + A P RG+ +P +A GRA AG GRRR +
Sbjct: 343 PRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRA-----------AGGAGRRRRRRR 391
Query: 104 PPSRESWTRSAPQR--------CPSQDAGRAGSRVCRSRPQSRGGQKAAASGAK---RRG 152
R + SAP+R P + + R+ SR RS S G+ A G + RG
Sbjct: 392 RRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRA-RSSSDSGSGRGAPGPGPEPGSERG 450
Query: 153 VGGKEPR-RQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRG 211
GG R +++P A S RR G + + S G + ++ + +K+R
Sbjct: 451 HGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRS 510
Query: 212 GGGGKKPRRGRR 223
K+P R
Sbjct: 511 RSAEKRPHSPSR 522
Score = 35.4 bits (80), Expect = 0.043
Identities = 42/179 (23%), Positives = 64/179 (35%), Gaps = 30/179 (16%)
Query: 75 SHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSR 134
S G +R ++ ++K + + K P + RS S + S SR
Sbjct: 214 SDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDSR 273
Query: 135 PQSRGGQKAAASGAK---RRGVGGKEPRRQKPAAAGAKSRGGKSHKK------------- 178
SR K G K +R G + P + G+ R G S ++
Sbjct: 274 SPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHS 333
Query: 179 ---------PRRRGQKAAPAKNSGGGGNK-PQKAAAAGAKNRG----GGGGKKPRRGRR 223
PR R + AA A G + P +A ++ RG GG G++ RR RR
Sbjct: 334 PPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRR 392
Score = 34.3 bits (77), Expect = 0.095
Identities = 43/184 (23%), Positives = 66/184 (35%), Gaps = 29/184 (15%)
Query: 54 RRPCASHRGRRITPATALLLLSHR---GRAERRSMQAAAAKAGSPGRRRVGKGPPSRESW 110
+RP GRR SHR G + S+ + + + SP R R++
Sbjct: 241 KRPHTESPGRR----------SHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTG 290
Query: 111 T-RSAPQRCPSQDAGRAGSRVCRSRPQSRGG--QKAAASGAKRRGV-------GGKEPRR 160
+ RS+ R PS G PQ GG Q++ A G + PR
Sbjct: 291 SQRSSGSRSPSPSGGSGWGS-----PQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRV 345
Query: 161 QKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKP-R 219
+ AAA A + + + P R ++ + G ++ + R P R
Sbjct: 346 RDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRR 405
Query: 220 RGRR 223
RGRR
Sbjct: 406 RGRR 409
Score = 33.9 bits (76), Expect = 0.12
Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 28/170 (16%)
Query: 76 HRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCR--- 132
HRG + ++A+ +++ G SR+ + C S R + +
Sbjct: 151 HRGYRTKHWSSSSASPPPKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKKKSVKKHR 210
Query: 133 -------SRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHK-------- 177
SR + R +++ K + K P + P + G SH
Sbjct: 211 RDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYS 270
Query: 178 ----------KPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKK 217
K R G+K ++SG P + G+ R GG G++
Sbjct: 271 DSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQR 320
Score = 29.3 bits (64), Expect = 3.1
Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 11/148 (7%)
Query: 77 RGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWT----------RSAPQRCPSQDAGRA 126
R R +RR + + SP R++ R + RS +C ++ +
Sbjct: 180 RSRKKRRLESECSCGSSSPLRKKKKSVKKHRRDRSDSGSRRKRRHRSRSSKCKRKEKNKE 239
Query: 127 GSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKA 186
R P R + ++ S + + + P+ K R +R
Sbjct: 240 KKRPHTESPGRRSHRHSSGS-SHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSR 298
Query: 187 APAKNSGGGGNKPQKAAAAGAKNRGGGG 214
+P+ + G G PQ+ +G ++ GG
Sbjct: 299 SPSPSGGSGWGSPQRNGGSGQRSGAHGG 326
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 45.4 bits (106), Expect = 4e-05
Identities = 50/179 (27%), Positives = 75/179 (41%), Gaps = 22/179 (12%)
Query: 49 QRPAGRRPCASHRG---RRITPATALLLLSHRGRAERRSMQAAAAK-AGSPGRRRVGKGP 104
+R +G P A +G R A A S R E+R Q + AG G+RR +
Sbjct: 174 RRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQCRPAGGTGQRRGSRSS 233
Query: 105 PSRESWTRSAPQRCPSQDAGRA----GSRVCRSRPQSRGGQKAAASGAKRRGVG------ 154
PS + + A R A A G R + +PQ + A +G +RRG G
Sbjct: 234 PSADQ--QRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTG-QRRGSGYSPSAD 290
Query: 155 --GKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRG 211
G + R ++ AAA A + G +K +R + PA GG G + ++ A +G
Sbjct: 291 QQGAQDREEEAAAAPAPTSSGHRTEKRKRLQLQCQPA---GGTGQRRGSGCSSSANQQG 346
Score = 44.7 bits (104), Expect = 7e-05
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 32/201 (15%)
Query: 51 PAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPS---- 106
PA + A R A HR +R+ +Q AG G+RR + PS
Sbjct: 75 PAADQQRAQDREEEAAAAPVPTSSGHRTE-KRKRLQLQCQPAGGTGQRRGSRSSPSADQQ 133
Query: 107 ----RESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRG----GQKAAASGAKRRGVGGKEP 158
RE +AP P+ R R R +PQ R GQ+ + + G +
Sbjct: 134 RAQDREEEAAAAP--VPTSRGHRTEKRK-RQQPQRRPAGGTGQRRGSGSSPSADQQGAQD 190
Query: 159 RRQKPAAAGA-KSRGGKSHKKP-------------RRRGQKAAPAKNSGGGGNKPQKAAA 204
R ++ AAA A SRG ++ K+ +RRG +++P+ + ++ ++AAA
Sbjct: 191 REEEAAAAPAPTSRGHRTEKRKPQQPQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAA 250
Query: 205 AGAKNRGG--GGGKKPRRGRR 223
A A G +KP++ +R
Sbjct: 251 APAPTSRGHRTEKRKPQQPQR 271
Score = 44.3 bits (103), Expect = 9e-05
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 27/177 (15%)
Query: 49 QRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
+RPAG RG +P+ + + A+ R +AAAA A + R K P +
Sbjct: 165 RRPAGGT--GQRRGSGSSPS------ADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQ- 215
Query: 109 SWTRSAPQRCPSQDAG-RAGSRVCRS----RPQSRGGQKAAASGAKRRGVGGKEPRRQKP 163
PQ P+ G R GSR S R Q R + AAA RG ++ + Q+P
Sbjct: 216 ------PQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQP 269
Query: 164 AAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRR 220
A G +RRG +P+ + G ++ ++AAAA A G +K +R
Sbjct: 270 QRRPAGGTG-------QRRGSGYSPSADQQGAQDREEEAAAAPAPTSSGHRTEKRKR 319
Score = 36.2 bits (82), Expect = 0.025
Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 29/175 (16%)
Query: 51 PAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPS---- 106
P+ + A R A A HR +R+ Q AG G+RR PS
Sbjct: 234 PSADQQRAQDREEEAAAAPAPTSRGHRTE-KRKPQQPQRRPAGGTGQRRGSGYSPSADQQ 292
Query: 107 ----RESWTRSAPQRCPSQDAGRAGSRV---CRSRPQSRGGQKAAASGAKRRGVGGKEPR 159
RE +AP P+ R R + +P GQ+ + + G + R
Sbjct: 293 GAQDREEEAAAAP--APTSSGHRTEKRKRLQLQCQPAGGTGQRRGSGCSSSANQQGAQDR 350
Query: 160 RQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGG 214
++ AAA + G H+ +R+ Q +PQ+ AAG R G G
Sbjct: 351 EEEAAAAPVPTSSG--HRTEKRKPQ-------------QPQRRPAAGTGQRRGSG 390
Score = 30.8 bits (68), Expect = 1.1
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 15/129 (11%)
Query: 104 PPSRESWTRSAPQRCPSQ-DAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVG-------- 154
P +E TR R S+ D + RPQ + + A +RRG G
Sbjct: 3 PRQKEQDTRLRKLRESSEGDQWLENEKTKPLRPQQQPQCQPAGGTGQRRGSGSSPSADQQ 62
Query: 155 GKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGG 214
G + R ++ AAA A + + R AAP S G + +K + GG G
Sbjct: 63 GAQDREEEAAAAPAADQ---QRAQDREEEAAAAPVPTSSGHRTEKRKRLQLQCQPAGGTG 119
Query: 215 GKKPRRGRR 223
RRG R
Sbjct: 120 ---QRRGSR 125
Score = 29.6 bits (65), Expect = 2.3
Identities = 37/146 (25%), Positives = 54/146 (36%), Gaps = 25/146 (17%)
Query: 49 QRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
+RPAG RG +P+ +G +R AAA S G R E
Sbjct: 271 RRPAGGT--GQRRGSGYSPSA-----DQQGAQDREEEAAAAPAPTSSGHRT--------E 315
Query: 109 SWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQ----KAAA------SGAKRRGVGGKEP 158
R Q P+ G+ C S +G Q +AAA SG + ++P
Sbjct: 316 KRKRLQLQCQPAGGTGQRRGSGCSSSANQQGAQDREEEAAAAPVPTSSGHRTEKRKPQQP 375
Query: 159 RRQKPAAAGAKSRGGKSHKKPRRRGQ 184
+R+ A G + G S ++R Q
Sbjct: 376 QRRPAAGTGQRRGSGSSPSADQQRAQ 401
>gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo
sapiens]
Length = 333
Score = 45.1 bits (105), Expect = 5e-05
Identities = 51/167 (30%), Positives = 67/167 (40%), Gaps = 36/167 (21%)
Query: 76 HRGRAE-RRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSR 134
+RGR E +RS Q K G G R V GP A + + RSR
Sbjct: 167 NRGRGEQKRSGQLGDIKRGKGGERNVPAGP-----------------GGSAAANDLRRSR 209
Query: 135 PQSRGGQKAAASGAKRRGVGGKEPRR--------QKPAAAGAKSRGG--KSHKKPRRRGQ 184
+ Q+A G +R G+ PRR ++ A+ RGG +S + PRR G
Sbjct: 210 VSAPVWQRARGRGPRRARRSGRGPRRGPEVWPRSEEGPGGLAEVRGGARRSGRGPRR-GP 268
Query: 185 KAAPAKNSGGGGNKPQKAAAAG-AKNRGGGGG------KKPRRGRRL 224
+ P G GG + G A+ RGG GG KPR R L
Sbjct: 269 EVWPRSEEGSGGLAEVRGGPGGLAEVRGGPGGLAEVIIVKPRAMRGL 315
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 45.1 bits (105), Expect = 5e-05
Identities = 64/219 (29%), Positives = 88/219 (40%), Gaps = 42/219 (19%)
Query: 32 AQPAQA---ADEVLELPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAA 88
A+PA+A A E A R G + RG P A LLL A S+ A+
Sbjct: 219 AKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLL-----ASAVSLAAS 273
Query: 89 AAKAGSPGRRRVGKGPP---------SRESWTRSAPQRCPSQ-DAGRAGSRVCRSRPQSR 138
A++ P + R+G P SR P+RC + + AG + R SR
Sbjct: 274 LARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 333
Query: 139 GGQKAAASGAKRRGVGGKEPR---RQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGG 195
GG+ A RR GG+E R R++ A G+ P AAP
Sbjct: 334 GGEVVGA----RRRRGGEERRVRGRRQGCALGS----------PPIPAGPAAP------- 372
Query: 196 GNKPQKAAAAGAKNRGGGGGKKPRRGRRLLGLLPCLWPR 234
G ++ AA + RGGG G PR G + G+ + PR
Sbjct: 373 GRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPR 411
Score = 34.3 bits (77), Expect = 0.095
Identities = 48/187 (25%), Positives = 67/187 (35%), Gaps = 24/187 (12%)
Query: 49 QRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
QR A RR H R TP L G +S + +A G RV +G P ++
Sbjct: 140 QRLAARRWL--HSPREPTPPGRLSAPPRHG-PHPQSFRRPSAHPPGRGSGRVPRGQPEQQ 196
Query: 109 SWTR----------SAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGG--K 156
+W + S PS RA R+R ++ G + GA+R G +
Sbjct: 197 AWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSR-GRGGAERPAARGSAQ 255
Query: 157 EPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGK 216
+P + A A S + P P G P + AA A +R
Sbjct: 256 QPPLARLLLASAVSLAASLARSP--------PPLQPRLGSASPPRLAAPLAGSRAPSLSP 307
Query: 217 KPRRGRR 223
PRR RR
Sbjct: 308 FPRRCRR 314
Score = 28.1 bits (61), Expect = 6.8
Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 4/122 (3%)
Query: 87 AAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAAS 146
A A G G RR + R +P+ +Q G G R+R S + + A+
Sbjct: 367 AGPAAPGRAGERRAARQWRKRGGGPGVSPRE-GAQGEGVRGGVTPRARGSSTCLRPSPAT 425
Query: 147 ---GAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAA 203
GA R + PR P+A + GG + P + K G + P A
Sbjct: 426 WQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPA 485
Query: 204 AA 205
+
Sbjct: 486 TS 487
>gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo
sapiens]
Length = 296
Score = 45.1 bits (105), Expect = 5e-05
Identities = 51/167 (30%), Positives = 67/167 (40%), Gaps = 36/167 (21%)
Query: 76 HRGRAE-RRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSR 134
+RGR E +RS Q K G G R V GP A + + RSR
Sbjct: 130 NRGRGEQKRSGQLGDIKRGKGGERNVPAGP-----------------GGSAAANDLRRSR 172
Query: 135 PQSRGGQKAAASGAKRRGVGGKEPRR--------QKPAAAGAKSRGG--KSHKKPRRRGQ 184
+ Q+A G +R G+ PRR ++ A+ RGG +S + PRR G
Sbjct: 173 VSAPVWQRARGRGPRRARRSGRGPRRGPEVWPRSEEGPGGLAEVRGGARRSGRGPRR-GP 231
Query: 185 KAAPAKNSGGGGNKPQKAAAAG-AKNRGGGGG------KKPRRGRRL 224
+ P G GG + G A+ RGG GG KPR R L
Sbjct: 232 EVWPRSEEGSGGLAEVRGGPGGLAEVRGGPGGLAEVIIVKPRAMRGL 278
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 45.1 bits (105), Expect = 5e-05
Identities = 64/219 (29%), Positives = 88/219 (40%), Gaps = 42/219 (19%)
Query: 32 AQPAQA---ADEVLELPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAA 88
A+PA+A A E A R G + RG P A LLL A S+ A+
Sbjct: 219 AKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLL-----ASAVSLAAS 273
Query: 89 AAKAGSPGRRRVGKGPP---------SRESWTRSAPQRCPSQ-DAGRAGSRVCRSRPQSR 138
A++ P + R+G P SR P+RC + + AG + R SR
Sbjct: 274 LARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 333
Query: 139 GGQKAAASGAKRRGVGGKEPR---RQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGG 195
GG+ A RR GG+E R R++ A G+ P AAP
Sbjct: 334 GGEVVGA----RRRRGGEERRVRGRRQGCALGS----------PPIPAGPAAP------- 372
Query: 196 GNKPQKAAAAGAKNRGGGGGKKPRRGRRLLGLLPCLWPR 234
G ++ AA + RGGG G PR G + G+ + PR
Sbjct: 373 GRAGERRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPR 411
Score = 34.3 bits (77), Expect = 0.095
Identities = 48/187 (25%), Positives = 67/187 (35%), Gaps = 24/187 (12%)
Query: 49 QRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRE 108
QR A RR H R TP L G +S + +A G RV +G P ++
Sbjct: 140 QRLAARRWL--HSPREPTPPGRLSAPPRHG-PHPQSFRRPSAHPPGRGSGRVPRGQPEQQ 196
Query: 109 SWTR----------SAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGG--K 156
+W + S PS RA R+R ++ G + GA+R G +
Sbjct: 197 AWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSR-GRGGAERPAARGSAQ 255
Query: 157 EPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGK 216
+P + A A S + P P G P + AA A +R
Sbjct: 256 QPPLARLLLASAVSLAASLARSP--------PPLQPRLGSASPPRLAAPLAGSRAPSLSP 307
Query: 217 KPRRGRR 223
PRR RR
Sbjct: 308 FPRRCRR 314
Score = 28.1 bits (61), Expect = 6.8
Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 4/122 (3%)
Query: 87 AAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAAS 146
A A G G RR + R +P+ +Q G G R+R S + + A+
Sbjct: 367 AGPAAPGRAGERRAARQWRKRGGGPGVSPRE-GAQGEGVRGGVTPRARGSSTCLRPSPAT 425
Query: 147 ---GAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAA 203
GA R + PR P+A + GG + P + K G + P A
Sbjct: 426 WQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPA 485
Query: 204 AA 205
+
Sbjct: 486 TS 487
>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
subunit [Homo sapiens]
Length = 2339
Score = 45.1 bits (105), Expect = 5e-05
Identities = 47/182 (25%), Positives = 67/182 (36%), Gaps = 22/182 (12%)
Query: 44 LPALLQRPAGRRPCASHRGRRITPATALLLLSHRGRAERRSMQAAAAKA--------GSP 95
+ L QRP G C++ R + HR R Q + K G+P
Sbjct: 2022 ISTLAQRPRGTHLCSTTPDRPPPSQASSHHHHHRCHRRRDRKQRSLEKGPSLSADMDGAP 2081
Query: 96 GRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGG 155
VG G P E T +R Q+ GR+ R +P S +K R GG
Sbjct: 2082 SSA-VGPGLPPGEGPTGCRRERERRQERGRSQER---RQPSSSSSEKQRFYSCDR--FGG 2135
Query: 156 KEPRRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGG 215
+EP + KP+ + SH GQ+ P G N + +GA G GG
Sbjct: 2136 REPPKPKPSLS--------SHPTSPTAGQEPGPHPQGSGSVNGSPLLSTSGASTPGRGGR 2187
Query: 216 KK 217
++
Sbjct: 2188 RQ 2189
Score = 30.0 bits (66), Expect = 1.8
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 8/111 (7%)
Query: 119 PSQDAGRAGSRVCRSRPQSRGGQKAA----ASGAKRRGVGGKEPRRQKPAAAGAKSRGGK 174
P ++G G+R R RP ++AA A + RG G + RR G+ +
Sbjct: 872 PKAESGEPGAREERPRPHRSHSKEAAGPPEARSERGRGPGPEGGRRHH--RRGSPEEAAE 929
Query: 175 SHKKPRRRGQKAAPAKNSGG--GGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
+ R + P+K G G + + A R G++P R R
Sbjct: 930 REPRRHRAHRHQDPSKECAGAKGERRARHRGGPRAGPREAESGEEPARRHR 980
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 45.1 bits (105), Expect = 5e-05
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 61 RGRRITPATA--LLLLSHRGRAERRSMQAAAAKAGS-------PGRRRVGKGPPSRESWT 111
R R TP + ++ G ++ + AAAA A S P + G P R +
Sbjct: 314 RSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGRNA-- 371
Query: 112 RSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSR 171
SA +R S + + SR SR SR ++ G R G+ R + + + ++SR
Sbjct: 372 -SARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRS--GRHARSRSRSWSRSRSR 428
Query: 172 GGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGR 222
+ + + R RG++ +SGGG + + + A+ RGG G ++ R R
Sbjct: 429 S-RRYSRSRSRGRR-----HSGGGSRDGHRYSRSPAR-RGGYGPRRRSRSR 472
Score = 37.0 bits (84), Expect = 0.015
Identities = 35/152 (23%), Positives = 52/152 (34%), Gaps = 12/152 (7%)
Query: 77 RGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQR------------CPSQDAG 124
R + RS +++ S GRR G G ++RS +R S D
Sbjct: 420 RSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRY 479
Query: 125 RAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKKPRRRGQ 184
R G R R SR + S ++ R + P+ + ++SR P +
Sbjct: 480 RRGGRGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQSPSPSPARE 539
Query: 185 KAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGK 216
K S G K +K A K G K
Sbjct: 540 KLTRPAASPAVGEKLKKTEPAAGKETGAAKPK 571
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 44.7 bits (104), Expect = 7e-05
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 132 RSRPQSRGGQKAAASGAKRRGVGGKEPRRQK--PAAAGAKSRGGKSHKKPRRRGQKAAPA 189
R+R S GG A RG + PRRQ+ PAA +RG + + PA
Sbjct: 15 RARAPSGGGSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPARGAAAWGR-----SGGGPA 69
Query: 190 KNSGG-GGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
SGG GG P++A A GG GG P GRR
Sbjct: 70 AQSGGDGGGLPRRAGAEPGGRGGGSGGTMP-GGRR 103
Score = 30.4 bits (67), Expect = 1.4
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 86 QAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAA 145
+A A G G+ + + P R SW R ++ P A +R + +S GG AA
Sbjct: 15 RARAPSGGGSGQAQ--RPGPGRGSWRRPPRRQRPGPAAPSPPARGAAAWGRS-GGGPAAQ 71
Query: 146 SGAKRRGVGGKEPRRQKPAAAGAKSRGGKS 175
SG G GG PRR A A RGG S
Sbjct: 72 SG----GDGGGLPRR---AGAEPGGRGGGS 94
>gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Homo
sapiens]
Length = 166
Score = 44.7 bits (104), Expect = 7e-05
Identities = 45/139 (32%), Positives = 57/139 (41%), Gaps = 21/139 (15%)
Query: 77 RGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAP---QRCPS--QDAGRA----- 126
RG+ ER+ A K G PGR+R K PP T P + PS QD+G +
Sbjct: 33 RGKEERQEPSTTARKVGRPGRKR--KHPPVESGDTPKDPAVISKSPSMAQDSGASELLPN 90
Query: 127 GSRVCRSRPQSRGGQKAAA--SGAKRRGVGGKEPRRQKPAAAGAKSRGGKSHKK----PR 180
G RS PQ G A GA G G E P A+ A G + K+ P
Sbjct: 91 GDLEKRSEPQPEEGSPAGGQKGGAPAEGEGAAE---TLPEASRAVENGCCTPKEGRGAPA 147
Query: 181 RRGQKAAPAKNSGGGGNKP 199
G+ +AP S G + P
Sbjct: 148 EAGESSAPGAASSGPTSIP 166
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,411,283
Number of Sequences: 37866
Number of extensions: 650227
Number of successful extensions: 8414
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 859
Number of HSP's that attempted gapping in prelim test: 5308
Number of HSP's gapped (non-prelim): 2716
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.