Search of human proteins with 239756539

Search of human proteins with 239756539

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756539 PREDICTED: hypothetical protein XP_002344929 [Homo
sapiens]
         (223 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756539 PREDICTED: hypothetical protein XP_002344929 [Homo ...   451   e-127
gi|239751144 PREDICTED: hypothetical protein XP_002347730 [Homo ...   451   e-127
gi|239745508 PREDICTED: hypothetical protein XP_002343507 [Homo ...   451   e-127
gi|239749365 PREDICTED: hypothetical protein XP_002347014 [Homo ...    39   0.005
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]          37   0.010
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             37   0.018
gi|41393599 coproporphyrinogen oxidase [Homo sapiens]                  36   0.023
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            36   0.023
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            36   0.023
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                   35   0.039
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]            35   0.039
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]            35   0.039
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                  35   0.039
gi|23943880 translation initiation factor eIF-2B subunit alpha/b...    35   0.067
gi|56549117 dynamin 1 isoform 2 [Homo sapiens]                         34   0.088
gi|59853099 dynamin 1 isoform 1 [Homo sapiens]                         34   0.088
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]            34   0.11 
gi|169204928 PREDICTED: hypothetical protein [Homo sapiens]            34   0.11 
gi|113423861 PREDICTED: hypothetical protein [Homo sapiens]            34   0.11 
gi|113423437 PREDICTED: hypothetical protein [Homo sapiens]            34   0.11 
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         34   0.11 
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]         33   0.26 
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      32   0.33 
gi|169162266 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|169161822 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|169162655 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|116235482 glycosyltransferase-like 1B [Homo sapiens]                32   0.33 
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]    32   0.33 

>gi|239756539 PREDICTED: hypothetical protein XP_002344929 [Homo
           sapiens]
          Length = 223

 Score =  451 bits (1159), Expect = e-127
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD 60
           MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD
Sbjct: 1   MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD 60

Query: 61  AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD 120
           AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD
Sbjct: 61  AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD 120

Query: 121 LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL 180
           LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL
Sbjct: 121 LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL 180

Query: 181 GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP 223
           GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP
Sbjct: 181 GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP 223


>gi|239751144 PREDICTED: hypothetical protein XP_002347730 [Homo
           sapiens]
          Length = 223

 Score =  451 bits (1159), Expect = e-127
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD 60
           MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD
Sbjct: 1   MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD 60

Query: 61  AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD 120
           AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD
Sbjct: 61  AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD 120

Query: 121 LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL 180
           LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL
Sbjct: 121 LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL 180

Query: 181 GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP 223
           GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP
Sbjct: 181 GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP 223


>gi|239745508 PREDICTED: hypothetical protein XP_002343507 [Homo
           sapiens]
          Length = 223

 Score =  451 bits (1159), Expect = e-127
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD 60
           MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD
Sbjct: 1   MEEDDTPNAGVHAVVSCQQQLAVEAPVLLGVLGANGLQPLGNAPWDGLICSQDALARCHD 60

Query: 61  AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD 120
           AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD
Sbjct: 61  AVSDVRQLLLLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAAD 120

Query: 121 LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL 180
           LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL
Sbjct: 121 LASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAAL 180

Query: 181 GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP 223
           GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP
Sbjct: 181 GRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPSLARSGAP 223


>gi|239749365 PREDICTED: hypothetical protein XP_002347014 [Homo
           sapiens]
          Length = 190

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 45/135 (33%), Positives = 51/135 (37%), Gaps = 19/135 (14%)

Query: 73  RGQCWILVGHGAGCG--GRGRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEA 130
           RG  W+  G GAG G  G G   G        G     PS A   R  A  AS       
Sbjct: 20  RGATWLGRGGGAGPGQSGPGHGQGTATSWARTGESGAGPSPA--WRRCAGEASR------ 71

Query: 131 GRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRG-GRREHD 189
           GR++A  G  K+P RP         RAA   R R      P+ R  +A  G G  RRE D
Sbjct: 72  GRQRARSGPPKSPRRPDAQL-----RAARTQRARA---QTPQLRREDARAGDGWPRREED 123

Query: 190 PSPPPSDVTRTTSRG 204
             PP     R    G
Sbjct: 124 DVPPEEKRLRLLLEG 138


>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
          Length = 430

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 50/169 (29%), Positives = 63/169 (37%), Gaps = 22/169 (13%)

Query: 70  LLLRGQCWILVGHGAGCGGRGRRAGEWIQGENAG-LVTRTPSAARSERNAADLASEGAAQ 128
           LLL G     +  G G  GRGRR      G+ A   + R    +      AD  S G  +
Sbjct: 13  LLLAGLALRELEPGCGSPGRGRRGPRPGPGDEAAPALGRRGKGSGGPEAGADGLSRG--E 70

Query: 129 EAGRRKAAPGLLKAPLRPPPSFFLYEERAASNG-RRRTGLRAAPERR--SPEAALGRGGR 185
              RR A P L   P   P +     +     G  R +G+    ++R  SP     R GR
Sbjct: 71  RGPRRAAVPELSAQPAGSPRASLAGSDGGGGGGSARSSGISLGYDQRHGSP-----RSGR 125

Query: 186 REHDPSPPP-------SDVTRTTSRGSLGPSLLLLSPSL----ARSGAP 223
            +  P P P       S V+   SRGS G     L P      ARS  P
Sbjct: 126 SDPRPGPGPPSVGSARSSVSSLGSRGSAGAYADFLPPGACPAPARSPEP 174


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 37/118 (31%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 87  GGRGRRAGEWIQGENAGLVTRTPSAARSER-NAADLASEGAAQEAGRRKAAPGLLKAPLR 145
           GG G+R+G    G   G     P    S      D A+  A     R K +P    +P  
Sbjct: 315 GGSGQRSGA--HGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESP----SPRS 368

Query: 146 PPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPPSDVTRTTSR 203
            P S       A   GRRR   R     RS  +A  R GRR   P+PP    +R+ SR
Sbjct: 369 APSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGS-SRSLSR 425



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 106 TRTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKAPLRPP--PSFFLYEERAASNGRR 163
           +R+PS +      +   + G+ Q +G     PG   +P   P  PS  + ++ AA+    
Sbjct: 297 SRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTP 356

Query: 164 RTGLRAAPERRSPEAALGRGGR 185
               + +P  RS  ++ GRGGR
Sbjct: 357 PARGKESPSPRSAPSSQGRGGR 378


>gi|41393599 coproporphyrinogen oxidase [Homo sapiens]
          Length = 454

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 9/58 (15%)

Query: 67  QLLLLLRGQCWILVGHGAG-------CGGRGRRAGEWIQGENAGLVTRTPSAARSERN 117
           QL  L  G CW++   G G       CGG G RA  W Q   AG V R P  A +E++
Sbjct: 4   QLGRLSSGPCWLVARGGCGGPRAWSQCGGGGLRA--WSQRSAAGRVCRPPGPAGTEQS 59


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 28/104 (26%)

Query: 83  GAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKA 142
           GAG GG GRR      G  A ++ R P   R +R+ A  A+  AAQ              
Sbjct: 871 GAGAGGGGRRVRHG-HGHGAAVLQRAP--CRQQRHLAPAAAAAAAQGV------------ 915

Query: 143 PLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRR 186
                        RAA     R G + AP  R    A GR  RR
Sbjct: 916 -------------RAAQGRAHRPGAQGAPSHRHRPGARGRRSRR 946


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 28/104 (26%)

Query: 83  GAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKA 142
           GAG GG GRR      G  A ++ R P   R +R+ A  A+  AAQ              
Sbjct: 871 GAGAGGGGRRVRHG-HGHGAAVLQRAP--CRQQRHLAPAAAAAAAQGV------------ 915

Query: 143 PLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRR 186
                        RAA     R G + AP  R    A GR  RR
Sbjct: 916 -------------RAAQGRAHRPGAQGAPSHRHRPGARGRRSRR 946


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 84  AGCGGRGRRAGEWIQ------GENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAP 137
           AG  G G++A    Q      GE AG  + TP+   S  ++A    E      G  K  P
Sbjct: 267 AGAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGELKGTP 326

Query: 138 GLLKAPLRPPPSFFLYEERAA 158
               +P  P PS    ++ AA
Sbjct: 327 AAALSPPEPAPSPGQQQQAAA 347


>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 40/139 (28%), Positives = 52/139 (37%), Gaps = 15/139 (10%)

Query: 83  GAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKA 142
           GAG GG G   G   +G  + +  R  S A S   AA LA          R A+     +
Sbjct: 621 GAGGGGSGEGQG---RGPGSRVSVRRSSRAPSSCRAASLAPP--------RPASATSAGS 669

Query: 143 PLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPPSDVTRTTS 202
           P  P P   +     +++G     L     R+    +  RGG R   PS   S V  TT 
Sbjct: 670 PTSPAPPLHM----VSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTP 725

Query: 203 RGSLGPSLLLLSPSLARSG 221
           RG    S       L +SG
Sbjct: 726 RGPEASSPRARGSFLPKSG 744


>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 40/139 (28%), Positives = 52/139 (37%), Gaps = 15/139 (10%)

Query: 83  GAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKA 142
           GAG GG G   G   +G  + +  R  S A S   AA LA          R A+     +
Sbjct: 621 GAGGGGSGEGQG---RGPGSRVSVRRSSRAPSSCRAASLAPP--------RPASATSAGS 669

Query: 143 PLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPPSDVTRTTS 202
           P  P P   +     +++G     L     R+    +  RGG R   PS   S V  TT 
Sbjct: 670 PTSPAPPLHM----VSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTP 725

Query: 203 RGSLGPSLLLLSPSLARSG 221
           RG    S       L +SG
Sbjct: 726 RGPEASSPRARGSFLPKSG 744


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 84  AGCGGRGRRAGEWIQ------GENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAP 137
           AG  G G++A    Q      GE AG  + TP+   S  ++A    E      G  K  P
Sbjct: 273 AGAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGELKGTP 332

Query: 138 GLLKAPLRPPPSFFLYEERAA 158
               +P  P PS    ++ AA
Sbjct: 333 AAALSPPEPAPSPGQQQQAAA 353


>gi|23943880 translation initiation factor eIF-2B subunit
           alpha/beta/delta-like protein isoform 2 [Homo sapiens]
          Length = 322

 Score = 34.7 bits (78), Expect = 0.067
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 25/146 (17%)

Query: 53  DALARCHDAVSDVRQL------LLLLRGQCWILVGHGAGCGGRGRRA-GEWIQGENAGLV 105
           +A+   H A   +R +       + L G   + V   AG GG G  A   +++ + + LV
Sbjct: 28  EAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVAFVRDKLSFLV 87

Query: 106 TRTPSA---ARSERNAADLAS-----EGAAQEAGRRKAAPGLL----------KAPLRPP 147
           T  P+A   AR+ R+ AD+A+     EGA +EA R +    L           + PLR P
Sbjct: 88  TARPTAVNMARAARDLADVAAREAEREGATEEAVRERRETELCEHWEEHTRQRELPLRGP 147

Query: 148 PSFFLYEERAASNGRRRTGLRAAPER 173
               + E R  + G R T      E+
Sbjct: 148 LGGTVLETRPYNQGARLTAFELVYEQ 173


>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
          Length = 851

 Score = 34.3 bits (77), Expect = 0.088
 Identities = 17/56 (30%), Positives = 25/56 (44%)

Query: 140 LKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPPS 195
           +  P+ PP      + ++   GRR       P+RR+P     R G R   P PPP+
Sbjct: 750 VSTPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPA 805


>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
          Length = 864

 Score = 34.3 bits (77), Expect = 0.088
 Identities = 17/56 (30%), Positives = 25/56 (44%)

Query: 140 LKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPPS 195
           +  P+ PP      + ++   GRR       P+RR+P     R G R   P PPP+
Sbjct: 750 VSTPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPA 805


>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 294

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 44/146 (30%), Positives = 54/146 (36%), Gaps = 38/146 (26%)

Query: 82  HGAGCGG-----RGRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAA 136
           H AGCG      RGR      +   AG V R  +  RS   +A  AS GAA  A   +AA
Sbjct: 76  HRAGCGAHGPGSRGRERRRGSRDPPAGPVARARARGRSAPGSAQPAS-GAAGPAAAPEAA 134

Query: 137 PGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPPSD 196
           P        PP              R+R  L ++P        LGR   R H        
Sbjct: 135 PPAWDPATLPP-------------SRKRNSLGSSPLH---PVRLGR--VRAH-------- 168

Query: 197 VTRTTSRGSLGPSLLLLSPSLARSGA 222
                  G  GPS+L ++P  A  GA
Sbjct: 169 ------AGPAGPSILRVAPHPALPGA 188


>gi|169204928 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 215

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 36/139 (25%), Positives = 50/139 (35%), Gaps = 11/139 (7%)

Query: 77  WILVGHGAGCGGRGRRAGEWIQGEN---AGLVTRTP----SAARSERNAADLASEGAAQE 129
           W+  G   G G    R G  ++G     A ++   P    +AAR     A +     +  
Sbjct: 75  WLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPR 134

Query: 130 AGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGR----GGR 185
           A      P L  AP R   +     +  A  GRR         +R  +A  GR    G R
Sbjct: 135 AWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRGRKKGRGVR 194

Query: 186 REHDPSPPPSDVTRTTSRG 204
           R   P PP +  T +  RG
Sbjct: 195 RRKSPPPPLTPATLSRPRG 213


>gi|113423861 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 215

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 36/139 (25%), Positives = 50/139 (35%), Gaps = 11/139 (7%)

Query: 77  WILVGHGAGCGGRGRRAGEWIQGEN---AGLVTRTP----SAARSERNAADLASEGAAQE 129
           W+  G   G G    R G  ++G     A ++   P    +AAR     A +     +  
Sbjct: 75  WLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPR 134

Query: 130 AGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGR----GGR 185
           A      P L  AP R   +     +  A  GRR         +R  +A  GR    G R
Sbjct: 135 AWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRGRKKGRGVR 194

Query: 186 REHDPSPPPSDVTRTTSRG 204
           R   P PP +  T +  RG
Sbjct: 195 RRKSPPPPLTPATLSRPRG 213


>gi|113423437 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 215

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 36/139 (25%), Positives = 50/139 (35%), Gaps = 11/139 (7%)

Query: 77  WILVGHGAGCGGRGRRAGEWIQGEN---AGLVTRTP----SAARSERNAADLASEGAAQE 129
           W+  G   G G    R G  ++G     A ++   P    +AAR     A +     +  
Sbjct: 75  WLAPGPWRGMGPGAVREGPQVKGARTSPAAIIALLPPHVAAAARPRAETAAVTDGVTSPR 134

Query: 130 AGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGR----GGR 185
           A      P L  AP R   +     +  A  GRR         +R  +A  GR    G R
Sbjct: 135 AWPPPPPPPLPPAPTRHGNTDVRASQPIAGCGRREGARWRGRGQRQAKALRGRKKGRGVR 194

Query: 186 REHDPSPPPSDVTRTTSRG 204
           R   P PP +  T +  RG
Sbjct: 195 RRKSPPPPLTPATLSRPRG 213


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 9/127 (7%)

Query: 98  QGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKAPLRPP-PSFFLYEER 156
           Q + +   + + S++  ER        G   E GRR+       +P R   PS    ++ 
Sbjct: 488 QNQQSSSDSGSSSSSEDERPKRSHVKNG---EVGRRRR-----HSPSRSASPSPRKRQKE 539

Query: 157 AASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPPSDVTRTTSRGSLGPSLLLLSPS 216
            +  GRRR      P RR    +     RR   P+PPP   T +       PS    SP 
Sbjct: 540 TSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPP 599

Query: 217 LARSGAP 223
           + R  +P
Sbjct: 600 IQRRYSP 606



 Score = 31.6 bits (70), Expect = 0.57
 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 107 RTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTG 166
           RT S  R  R  +  AS        RR+  P     P  PPP          SN  R++ 
Sbjct: 377 RTSSPPRKTRRLSPSASPP------RRRHRPS---PPATPPPKTRHSPTPQQSNRTRKSR 427

Query: 167 LRAAPERRSPEAALGRGGRREHDPSPPP 194
           +  +P R S +    +G  +   PSP P
Sbjct: 428 VSVSPGRTSGKVTKHKGTEKRESPSPAP 455



 Score = 28.9 bits (63), Expect = 3.7
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 19/107 (17%)

Query: 106 TRTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGR--R 163
           +R+P   R  R++A L+   ++  + R ++ P       + PP      +R +S  R  R
Sbjct: 341 SRSP-VRRRRRSSASLSGSSSSSSSSRSRSPP-------KKPP------KRTSSPPRKTR 386

Query: 164 RTGLRAAPERR--SPEAALGRGGRREHDPSPPPSDVTRTTSRGSLGP 208
           R    A+P RR   P        +  H P+P  S+ TR  SR S+ P
Sbjct: 387 RLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTR-KSRVSVSP 432


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 50/167 (29%), Positives = 60/167 (35%), Gaps = 31/167 (18%)

Query: 84  AGCGGRGRRAGEWIQGENAG--------LVTRTPSAARSERNAADLASEGAAQEAGRRKA 135
           AG G  GRR G W     AG         +    SA + +     LA+ G A  A  R+ 
Sbjct: 40  AGEGAAGRRDGGWGPPGGAGDHQTLQRASLLPGGSADKDQEREPSLAARGTAPPAPPRQC 99

Query: 136 AP--------GLLKAPL--RPPPSF---------FLYEERAASNGRRRTGLRAAPERRSP 176
            P        GL   P    PPP            L+     +  R     +AA +R  P
Sbjct: 100 LPTPCPPLGHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPARTGPAGKAAADRGRP 159

Query: 177 EAALGRGGRREHDPSPPPSDV--TRTTSRGSLGPSLLLLSPSLARSG 221
             A GR  RR   PS PP  +  TR    G L   LLLL     R G
Sbjct: 160 GPAAGRRVRR--SPSFPPFLLAQTRLGRTGPLALCLLLLLHGAMRLG 204


>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
          Length = 547

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 6/106 (5%)

Query: 106 TRTPSAARSERNAADLASEGAAQEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRT 165
           TR P AA +  +   L   GAA+        P    AP    P       R+  + RR +
Sbjct: 81  TRPPVAAAAA-SLGSLPGPGAARGPSPSSPTPPAAAAPAEQAPRAKGRPRRSPESHRRSS 139

Query: 166 GLRAAPERRSPEAALGRGGRREHDPSPPPSDVTRTTSRGSL-GPSL 210
               +PERRSP + + R  + +       S + RT+S  ++ GP L
Sbjct: 140 ----SPERRSPGSPVCRADKAKSQQVRTSSTIRRTSSLDTITGPYL 181


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 5/126 (3%)

Query: 87   GGRGRRAGEWIQGENAGLVTRTPSAARSERNA-ADLASEGAAQEAGR--RKAAPGLLKAP 143
            G RG R    + G +     + PS A  ER     +   G A   G   R+ APG   +P
Sbjct: 965  GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSP 1024

Query: 144  LRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRR-EHDPSPPPSDVTRTTS 202
             R   S     +R  +      G   AP    P    G+ G R E  P+ P   V    +
Sbjct: 1025 GRDG-SPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGA 1083

Query: 203  RGSLGP 208
            RG  GP
Sbjct: 1084 RGPAGP 1089


>gi|169162266 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)

Query: 90  GRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAA-------PGLLKA 142
           GR AG + +G  +   + +     +    A ++S GAA+  GR   A        GL   
Sbjct: 180 GRTAGRFPRGSGSYPSSSSSGDMMASAAGASISSSGAARRGGRGACAGASANHRAGLPSP 239

Query: 143 PLRPPPSFFLYEERAAS--NGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPP 194
            L P     L  +++ S   G    G +A P     E+        +H  SPPP
Sbjct: 240 YLSPGRGLLLRSQKSPSRAGGAAAAGPQAGPPTVEVESDYRVSFEAKHCQSPPP 293


>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 33/114 (28%), Positives = 41/114 (35%), Gaps = 10/114 (8%)

Query: 81  GHGAGCGGRGRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAPGLL 140
           G G G  G G  A   +     G  +R P A    R AA    +   Q    R++    L
Sbjct: 109 GGGRGWEGGGLGARRAVTAARRGGASR-PLAGEPWREAARRRPQQCPQWGRARESRSAAL 167

Query: 141 KAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPP 194
            +P               +   R  GLRA  ER+S   A G GG R   P  PP
Sbjct: 168 ASPR--------VSNAPTTPASRNPGLRAQ-ERQSGRRAAGGGGARAEPPRVPP 212


>gi|169161822 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)

Query: 90  GRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAA-------PGLLKA 142
           GR AG + +G  +   + +     +    A ++S GAA+  GR   A        GL   
Sbjct: 180 GRTAGRFPRGSGSYPSSSSSGDMMASAAGASISSSGAARRGGRGACAGASANHRAGLPSP 239

Query: 143 PLRPPPSFFLYEERAAS--NGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPP 194
            L P     L  +++ S   G    G +A P     E+        +H  SPPP
Sbjct: 240 YLSPGRGLLLRSQKSPSRAGGAAAAGPQAGPPTVEVESDYRVSFEAKHCQSPPP 293


>gi|169162655 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)

Query: 90  GRRAGEWIQGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAA-------PGLLKA 142
           GR AG + +G  +   + +     +    A ++S GAA+  GR   A        GL   
Sbjct: 180 GRTAGRFPRGSGSYPSSSSSGDMMASAAGASISSSGAARRGGRGACAGASANHRAGLPSP 239

Query: 143 PLRPPPSFFLYEERAAS--NGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPP 194
            L P     L  +++ S   G    G +A P     E+        +H  SPPP
Sbjct: 240 YLSPGRGLLLRSQKSPSRAGGAAAAGPQAGPPTVEVESDYRVSFEAKHCQSPPP 293


>gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
          Length = 721

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 12/67 (17%)

Query: 128 QEAGRRKAAPGLLKAPLRPPPSFFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRRE 187
           +E G R  APG    PL P         R   +GR R   RAA     P A  G   R +
Sbjct: 36  REPGGRAGAPGCFPGPLMP---------RVPPDGRLR---RAAALDGDPGAGPGDHNRSD 83

Query: 188 HDPSPPP 194
             P PPP
Sbjct: 84  CGPQPPP 90


>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 16/105 (15%)

Query: 98  QGENAGLVTRTPSAARSERNAADLASEGAAQEAGRRKAAP----GLLKAPLR----PPPS 149
           QG   G     PSA    +N  D   +G  Q+ G+++  P    G  + P +    PPP 
Sbjct: 47  QGPPLGGQQSQPSAGDGNQN--DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPP 104

Query: 150 FFLYEERAASNGRRRTGLRAAPERRSPEAALGRGGRREHDPSPPP 194
                 +    G  + G    P R  P+    +GG ++  P PPP
Sbjct: 105 ------QGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPP 143


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,496,492
Number of Sequences: 37866
Number of extensions: 558412
Number of successful extensions: 3117
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 2966
Number of HSP's gapped (non-prelim): 375
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.