Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GYLTL1B Sequence: fasta or formatted (721aa) NCBI GI: 116235482
Description:

glycosyltransferase-like 1B

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         69           3
 C cysteine            1.7         12           1
 D aspartate           5.3         38           1
 E glutamate           4.9         35           2
 F phenylalanine       4.4         32           2
 G glycine             5.4         39           2
 H histidine           4.2         30           2
 I isoleucine          2.2         16           1
 K lysine              2.5         18           2
 L leucine            14.3        103           8
 M methionine          1.2          9           1
 N asparagine          2.6         19           1
 P proline             8.7         63           5
 Q glutamine           4.7         34           3
 R arginine            7.8         56           2
 S serine              4.7         34           2
 T threonine           3.2         23           1
 V valine              6.8         49           3
 W tryptophan          2.1         15           1
 Y tyrosine            3.7         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycosyltransferase-like 1B 
LARGE                 0.622   like-glycosyltransferase 
LARGE                 0.622   like-glycosyltransferase 
B3GNT1                0.050   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans...
C3orf21               0.037   hypothetical protein LOC152002 
GLT8D4                0.035   glycosyltransferase 8 domain containing 4 
GLT8D3                0.031   glycosyltransferase 8 domain containing 3 isoform 2...
GLT8D3                0.028   glycosyltransferase 8 domain containing 3 isoform 1...
LOC100291220          0.012   PREDICTED: hypothetical protein XP_002347633 
LOC100287224          0.012   PREDICTED: hypothetical protein XP_002343483 
PPP1R10               0.010   protein phosphatase 1, regulatory subunit 10 
LOC100131102          0.009   PREDICTED: hypothetical protein 
COL19A1               0.008   alpha 1 type XIX collagen precursor 
WIPF2                 0.008   WIRE protein 
NLGN2                 0.007   neuroligin 2 
ATXN2L                0.007   ataxin 2 related protein isoform B 
ATXN2L                0.007   ataxin 2 related protein isoform E 
ATXN2L                0.007   ataxin 2 related protein isoform C 
ATXN2L                0.007   ataxin 2 related protein isoform A 
ATXN2L                0.007   ataxin 2 related protein isoform D 
MEX3D                 0.007   ring finger and KH domain containing 1 
PDCD7                 0.007   programmed cell death 7 
SF1                   0.007   splicing factor 1 isoform 3 
SF1                   0.007   splicing factor 1 isoform 2 
SF1                   0.007   splicing factor 1 isoform 1 
B4GALNT3              0.007   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
ZXDC                  0.007   ZXD family zinc finger C isoform 2 
ZXDC                  0.007   ZXD family zinc finger C isoform 1 
CABLES2               0.007   Cdk5 and Abl enzyme substrate 2 
FMNL1                 0.007   formin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press