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Search of human proteins with 239756375
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756375 PREDICTED: similar to elongation factor Tu GTP
binding domain containing 1 [Homo sapiens]
(276 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756375 PREDICTED: similar to elongation factor Tu GTP bind... 566 e-162
gi|239750895 PREDICTED: similar to elongation factor Tu GTP bind... 566 e-162
gi|239745284 PREDICTED: similar to elongation factor Tu GTP bind... 566 e-162
gi|94966752 elongation factor Tu GTP binding domain containing 1... 412 e-115
gi|94966754 elongation factor Tu GTP binding domain containing 1... 412 e-115
gi|4503483 eukaryotic translation elongation factor 2 [Homo sapi... 44 1e-04
gi|149944526 additional sex combs like 3 [Homo sapiens] 36 0.042
gi|148746183 ubiquitin specific protease 35 [Homo sapiens] 33 0.35
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 32 0.61
gi|117553584 adaptor-related protein complex 3, delta 1 subunit ... 31 1.0
gi|4503611 ets variant 6 [Homo sapiens] 31 1.3
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 30 1.8
gi|66529407 tensin [Homo sapiens] 30 1.8
gi|31083144 axin 1 isoform b [Homo sapiens] 30 2.3
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 30 2.3
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 30 2.3
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 30 2.3
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 30 3.0
gi|154800443 solute carrier family 17 (sodium phosphate), member... 30 3.0
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 30 3.0
gi|150010540 FERM domain containing 4B [Homo sapiens] 30 3.0
gi|19557702 surfeit 6 [Homo sapiens] 30 3.0
gi|188536004 zinc finger protein 469 [Homo sapiens] 29 3.9
gi|27501450 axin 1 isoform a [Homo sapiens] 29 5.1
gi|226530771 adenosine deaminase domain containing 1 (testis-spe... 29 5.1
gi|226529650 adenosine deaminase domain containing 1 (testis-spe... 29 5.1
gi|21245124 adenosine deaminase domain containing 1 (testis-spec... 29 5.1
gi|24308263 prune [Homo sapiens] 29 5.1
gi|21264355 SWI/SNF-related matrix-associated actin-dependent re... 29 5.1
gi|116235474 LKB1 interacting protein [Homo sapiens] 29 5.1
>gi|239756375 PREDICTED: similar to elongation factor Tu GTP binding
domain containing 1 [Homo sapiens]
Length = 276
Score = 566 bits (1458), Expect = e-162
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE 60
MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE
Sbjct: 1 MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE 60
Query: 61 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 120
IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ
Sbjct: 61 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 120
Query: 121 EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 180
EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY
Sbjct: 121 EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 180
Query: 181 CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL 240
CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL
Sbjct: 181 CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL 240
Query: 241 VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV 276
VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV
Sbjct: 241 VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV 276
>gi|239750895 PREDICTED: similar to elongation factor Tu GTP binding
domain containing 1 [Homo sapiens]
Length = 276
Score = 566 bits (1458), Expect = e-162
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE 60
MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE
Sbjct: 1 MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE 60
Query: 61 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 120
IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ
Sbjct: 61 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 120
Query: 121 EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 180
EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY
Sbjct: 121 EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 180
Query: 181 CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL 240
CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL
Sbjct: 181 CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL 240
Query: 241 VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV 276
VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV
Sbjct: 241 VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV 276
>gi|239745284 PREDICTED: similar to elongation factor Tu GTP binding
domain containing 1 [Homo sapiens]
Length = 276
Score = 566 bits (1458), Expect = e-162
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE 60
MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE
Sbjct: 1 MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE 60
Query: 61 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 120
IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ
Sbjct: 61 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 120
Query: 121 EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 180
EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY
Sbjct: 121 EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 180
Query: 181 CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL 240
CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL
Sbjct: 181 CALENLYLLMGRELEYLEEVPPGNVLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRKL 240
Query: 241 VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV 276
VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV
Sbjct: 241 VNKASSGRRSSTGFYQWELWQVGHFVGISRPESASV 276
>gi|94966752 elongation factor Tu GTP binding domain containing 1
isoform 2 [Homo sapiens]
Length = 1069
Score = 412 bits (1059), Expect = e-115
Identities = 204/207 (98%), Positives = 205/207 (99%)
Query: 1 MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE 60
MCTGSQTFDS PPETQALKAAFMKCGSEDTAPVI+FVSKMFAVDAKALPQNKPRPLTQEE
Sbjct: 327 MCTGSQTFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKMFAVDAKALPQNKPRPLTQEE 386
Query: 61 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 120
IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ
Sbjct: 387 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 446
Query: 121 EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 180
EENNQES IAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY
Sbjct: 447 EENNQESFIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 506
Query: 181 CALENLYLLMGRELEYLEEVPPGNVLG 207
CALENLYLLMGRELEYLEEVPPGNVLG
Sbjct: 507 CALENLYLLMGRELEYLEEVPPGNVLG 533
>gi|94966754 elongation factor Tu GTP binding domain containing 1
isoform 1 [Homo sapiens]
Length = 1120
Score = 412 bits (1059), Expect = e-115
Identities = 204/207 (98%), Positives = 205/207 (99%)
Query: 1 MCTGSQTFDSLPPETQALKAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEE 60
MCTGSQTFDS PPETQALKAAFMKCGSEDTAPVI+FVSKMFAVDAKALPQNKPRPLTQEE
Sbjct: 378 MCTGSQTFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKMFAVDAKALPQNKPRPLTQEE 437
Query: 61 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 120
IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ
Sbjct: 438 IAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQ 497
Query: 121 EENNQESSIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 180
EENNQES IAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY
Sbjct: 498 EENNQESFIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAY 557
Query: 181 CALENLYLLMGRELEYLEEVPPGNVLG 207
CALENLYLLMGRELEYLEEVPPGNVLG
Sbjct: 558 CALENLYLLMGRELEYLEEVPPGNVLG 584
>gi|4503483 eukaryotic translation elongation factor 2 [Homo
sapiens]
Length = 858
Score = 44.3 bits (103), Expect = 1e-04
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 18/78 (23%)
Query: 130 AFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAYCALENLYLL 189
AF RVFSG+ G K+ ++GP Y+P + L P ++ L+
Sbjct: 412 AFGRVFSGLVSTGLKVRIMGPNYTP------------GKKEDLYLKP------IQRTILM 453
Query: 190 MGRELEYLEEVPPGNVLG 207
MGR +E +E+VP GN++G
Sbjct: 454 MGRYVEPIEDVPCGNIVG 471
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 35.8 bits (81), Expect = 0.042
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 37 VSKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIET 96
VS M + P P I+ R H ++ + + + PL P +D S+
Sbjct: 731 VSSMLLTSETTFVSSLPLPSETSPISNSSINERMAHQQRKSPSVSEEPLSPQKDESSATA 790
Query: 97 CPKGEEPRGDEQQVESMTPKPVLQEENN 124
P GE ++ + S TP+P++ ++
Sbjct: 791 KPLGENLTSQQKNL-SNTPEPIIMSSSS 817
>gi|148746183 ubiquitin specific protease 35 [Homo sapiens]
Length = 1018
Score = 32.7 bits (73), Expect = 0.35
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 20/123 (16%)
Query: 7 TFDSLPPETQAL-------KAAFMKCGSEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQE 59
T LPP T A + C +EDT P +++ + + +A +QE
Sbjct: 622 TARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSKEAGG-------QSSQE 674
Query: 60 EIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMTPKPVL 119
E +R E ++ EK + + E T+ E K EE +E++VE T K
Sbjct: 675 ERIEREEEGKEERTEKEEVGEEE---ESTRGEGERE---KEEEVEEEEEKVEKETEKEAE 728
Query: 120 QEE 122
QE+
Sbjct: 729 QEK 731
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 32.0 bits (71), Expect = 0.61
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 58 QEEIAQRRERA-RQRHAEKLAAAQGQA------PLEPTQDGSAIETCPKGEEPRGDEQQV 110
QE I Q+++R +Q+ +K+ Q +A P P+ D + PK EE + ++V
Sbjct: 3372 QEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSPDKDPAKESPKPEEQKNTPREV 3431
Query: 111 ESMTPKPVLQEENNQESSIA 130
+ PK L EE ES A
Sbjct: 3432 SPLLPK--LPEEPEAESKSA 3449
>gi|117553584 adaptor-related protein complex 3, delta 1 subunit
isoform 1 [Homo sapiens]
Length = 1112
Score = 31.2 bits (69), Expect = 1.0
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 49 PQNKPRPLTQEEIAQRRERARQRHAEKL----------AAAQGQAPLEPTQDGSAIETCP 98
P+ K + ++E + +++ +++ AE L A A AP+ T + +T
Sbjct: 753 PKKKEKKHKEKERDKEKKKEKEKKAEDLDFWLSTTPPPAPAPAPAPVPSTDECEDAKTEA 812
Query: 99 KGEEPRGDEQQVESMTPKPVLQEENNQE 126
+GEE + Q + +PKP ++ ++
Sbjct: 813 QGEEDDAEGQDQDKKSPKPKKKKHRKEK 840
Score = 30.4 bits (67), Expect = 1.8
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 27 SEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEK-LAAAQGQAPL 85
SED P +F + + P+++P +EE+A+RRE +Q A +P
Sbjct: 545 SEDERP-----RAVFHEEEQRRPKHRPSEADEEELARRREARKQEQANNPFYIKSSPSPQ 599
Query: 86 EPTQDGSAIETCP 98
+ QD +E P
Sbjct: 600 KRYQDTPGVEHIP 612
>gi|4503611 ets variant 6 [Homo sapiens]
Length = 452
Score = 30.8 bits (68), Expect = 1.3
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 51 NKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQV 110
N R L+ E AQ R Q + + + +P+E ++ E+ PK PR + +V
Sbjct: 207 NMIRRLSPAERAQG-PRPHQENNHQESYPLSVSPMENNHCPASSESHPKPSSPRQESTRV 265
Query: 111 ESMTPKPVLQE-ENNQESSIAFAR---VFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFS 166
+ P P++ N S+ F + G+ R GK I + L ++ + + S
Sbjct: 266 IQLMPSPIMHPLILNPRHSVDFKQSRLSEDGLHREGKPINL--SHREDLAYMNHIMVSVS 323
Query: 167 APPDGLPQVPHMAYCAL 183
P + + +A C L
Sbjct: 324 PPEEHAMPIGRIADCRL 340
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 30.4 bits (67), Expect = 1.8
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 27 SEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEK-LAAAQGQAPL 85
SED P +F + + P+++P +EE+A+RRE +Q A +P
Sbjct: 636 SEDERP-----RAVFHEEEQRRPKHRPSEADEEELARRREARKQEQANNPFYIKSSPSPQ 690
Query: 86 EPTQDGSAIETCP 98
+ QD +E P
Sbjct: 691 KRYQDTPGVEHIP 703
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 30.4 bits (67), Expect = 1.8
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 53 PRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKG-EEPRGDEQQVE 111
P+P+T A + + ++ + A+ Q P P + GS+ E +G + +QQ +
Sbjct: 601 PQPVTTSHYAH--DPSGMFRSQSFSEAEPQLPPAPVRGGSSREAVQRGLNSWQQQQQQQQ 658
Query: 112 SMTPKPVLQEENNQESSIA 130
P P QE + ES +A
Sbjct: 659 QPRPPPRQQERAHLESLVA 677
>gi|31083144 axin 1 isoform b [Homo sapiens]
Length = 826
Score = 30.0 bits (66), Expect = 2.3
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 38 SKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSA 93
S +F D P P PLTQ E A+RR ++ A + + Q GSA
Sbjct: 686 SHLFIQDPTMPPHPAPNPLTQLEEARRRLEEEEKRASRAPSKQRTRSQRKVGGGSA 741
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 30.0 bits (66), Expect = 2.3
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 30 TAPVIMFVSKMFAVDAKALPQNKPRPLTQEEIAQR--RERARQRHAEKLAAAQGQAPLEP 87
T PV+ + M + KA + L ++ ++ RER ++ EKL + + +
Sbjct: 446 TKPVVFSPTLMLTDEEKARIHAETALLMEKNKQEKELRERQQEEQKEKLRKEEQEQKAKK 505
Query: 88 TQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQEENNQESSIAFARVFSGVARRGK 143
Q+ E K ++ + + ++ ES K + ++E+S + +GV R+ K
Sbjct: 506 KQEAEENEITEKQQKAKEEMEKKESEQAK-----KEDKETSAKRGKEITGVKRQSK 556
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 30.0 bits (66), Expect = 2.3
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 30 TAPVIMFVSKMFAVDAKALPQNKPRPLTQEEIAQR--RERARQRHAEKLAAAQGQAPLEP 87
T PV+ + M + KA + L ++ ++ RER ++ EKL + + +
Sbjct: 446 TKPVVFSPTLMLTDEEKARIHAETALLMEKNKQEKELRERQQEEQKEKLRKEEQEQKAKK 505
Query: 88 TQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQEENNQESSIAFARVFSGVARRGK 143
Q+ E K ++ + + ++ ES K + ++E+S + +GV R+ K
Sbjct: 506 KQEAEENEITEKQQKAKEEMEKKESEQAK-----KEDKETSAKRGKEITGVKRQSK 556
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 30.0 bits (66), Expect = 2.3
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 30 TAPVIMFVSKMFAVDAKALPQNKPRPLTQEEIAQR--RERARQRHAEKLAAAQGQAPLEP 87
T PV+ + M + KA + L ++ ++ RER ++ EKL + + +
Sbjct: 446 TKPVVFSPTLMLTDEEKARIHAETALLMEKNKQEKELRERQQEEQKEKLRKEEQEQKAKK 505
Query: 88 TQDGSAIETCPKGEEPRGDEQQVESMTPKPVLQEENNQESSIAFARVFSGVARRGK 143
Q+ E K ++ + + ++ ES K + ++E+S + +GV R+ K
Sbjct: 506 KQEAEENEITEKQQKAKEEMEKKESEQAK-----KEDKETSAKRGKEITGVKRQSK 556
>gi|238624188 diffuse panbronchiolitis critical region 1 protein [Homo
sapiens]
Length = 1393
Score = 29.6 bits (65), Expect = 3.0
Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 27 SEDTAPVIMFVSKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQ-APL 85
+EDT P A+ + PL E + + H E+ A + +P
Sbjct: 970 NEDTTPS----------SAEPTENGERTPLANENTTTSPTESTE-HGERTANEKTTPSPA 1018
Query: 86 EPTQDGSAI-----ETCPKGEEPRGDEQQV----ESMTPKPVLQEENNQESSIAFARVF- 135
EPT+ G +T P +P E+ E+ TP PV E+ +++++A ++
Sbjct: 1019 EPTEHGERTPSANEKTIPSPAKPTEHEEMTPSANENTTPSPVKPTEHGEKTTLANEKITL 1078
Query: 136 --SGVARRGKKIFVLGPKYSP 154
G G K K +P
Sbjct: 1079 SPEGPTEHGAKTTSANEKITP 1099
>gi|154800443 solute carrier family 17 (sodium phosphate), member 1
[Homo sapiens]
Length = 467
Score = 29.6 bits (65), Expect = 3.0
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 205 VLGSFYCFLCQFWYFMLTDNQIDYPVYLCFTVDRK------LVNKASSGRRS 250
+ G+ C +C W+ + D+ D+P C ++ K LV + SS R+S
Sbjct: 204 IFGACGCAVCLLWFVLFYDDPKDHP---CISISEKEYITSSLVQQVSSSRQS 252
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 29.6 bits (65), Expect = 3.0
Identities = 17/79 (21%), Positives = 35/79 (44%)
Query: 54 RPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQQVESM 113
R ++E ++ +A+ HAEK Q + +D A+E + E Q+ +
Sbjct: 1229 RAAREKEEREKALKAQAEHAEKEKERLRQERMRSREDEDALEQARRAHEEARRRQEQQQQ 1288
Query: 114 TPKPVLQEENNQESSIAFA 132
+ Q++ Q +++A A
Sbjct: 1289 QRQEQQQQQQQQAAAVAAA 1307
>gi|150010540 FERM domain containing 4B [Homo sapiens]
Length = 1034
Score = 29.6 bits (65), Expect = 3.0
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 10/170 (5%)
Query: 34 IMFVSK-MFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGS 92
+M +S+ F +D K P + +EIA + A KL + ++ +GS
Sbjct: 348 VMAISQHQFYLDRKQSKAKIPSARSLDEIAMDLTETGTQRASKLVTLEAKSQFIMASNGS 407
Query: 93 AIETCPKGEEPRGDEQQVESMTPKPVLQEENNQESSIAFARVFSGVARRGKKIFVLGPKY 152
I + + E ++++ + + K +E+ QE + + R ++ PK
Sbjct: 408 LISSGSQDSEVSEEQKREKILELKK--KEKLLQEKLLKKVEELKKICLREAELTGKMPKE 465
Query: 153 SPL-------EFLRRVPLGFSAPPDGLPQVPHMAYCALENLYLLMGRELE 195
PL + RRV F + LP A LE+ +L+ + +E
Sbjct: 466 YPLNIGEKPPQVRRRVGTAFKLDDNLLPSEEDPALQELESNFLIQQKLVE 515
>gi|19557702 surfeit 6 [Homo sapiens]
Length = 361
Score = 29.6 bits (65), Expect = 3.0
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 49 PQNKPRPLTQEEIAQRRERARQRHA----EKLAAAQGQAPLEPTQDGSAIETCPKGEEPR 104
P K R TQ++ +R E+A + A EK AA G E ++ +A + G
Sbjct: 43 PPKKKRKKTQKKFRKREEKAAEHKAKSLGEKSPAASGARRPEAAKEEAAWASSSAGNPAD 102
Query: 105 GDEQQVESMTPKPVLQEENNQE 126
G + ES+ VL++ +++
Sbjct: 103 GLATEPESVFALDVLRQRLHEK 124
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 29.3 bits (64), Expect = 3.9
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 38 SKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAA--QGQAPLEPTQDGSAIE 95
S++ K QNKPRP E+ ++ E + ++L A QG+ L P + G+A+
Sbjct: 3827 SRVLPTKPKPNSQNKPRPPPSEQ--RKAEPGHTQRKDRLGKAFPQGRPLLRPPKRGTAVH 3884
Query: 96 TCPKGEEP 103
G EP
Sbjct: 3885 ----GAEP 3888
>gi|27501450 axin 1 isoform a [Homo sapiens]
Length = 862
Score = 28.9 bits (63), Expect = 5.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 38 SKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQ 80
S +F D P P PLTQ E A+RR ++ A + + Q
Sbjct: 686 SHLFIQDPTMPPHPAPNPLTQLEEARRRLEEEEKRASRAPSKQ 728
>gi|226530771 adenosine deaminase domain containing 1
(testis-specific) isoform 3 [Homo sapiens]
Length = 558
Score = 28.9 bits (63), Expect = 5.1
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 11/66 (16%)
Query: 147 VLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAYCALENLYLLMGRELEYLEEVPPGNVL 206
VL PK P EF+ + G P L Q M +L+ E V GNV+
Sbjct: 58 VLPPKKIPKEFIMKYKRGEINPVSALHQFAQMQRV-----------QLDLKETVTTGNVM 106
Query: 207 GSFYCF 212
G ++ F
Sbjct: 107 GPYFAF 112
>gi|226529650 adenosine deaminase domain containing 1
(testis-specific) isoform 2 [Homo sapiens]
Length = 565
Score = 28.9 bits (63), Expect = 5.1
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 11/66 (16%)
Query: 147 VLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAYCALENLYLLMGRELEYLEEVPPGNVL 206
VL PK P EF+ + G P L Q M +L+ E V GNV+
Sbjct: 76 VLPPKKIPKEFIMKYKRGEINPVSALHQFAQMQRV-----------QLDLKETVTTGNVM 124
Query: 207 GSFYCF 212
G ++ F
Sbjct: 125 GPYFAF 130
>gi|21245124 adenosine deaminase domain containing 1
(testis-specific) isoform 1 [Homo sapiens]
Length = 576
Score = 28.9 bits (63), Expect = 5.1
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 11/66 (16%)
Query: 147 VLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAYCALENLYLLMGRELEYLEEVPPGNVL 206
VL PK P EF+ + G P L Q M +L+ E V GNV+
Sbjct: 76 VLPPKKIPKEFIMKYKRGEINPVSALHQFAQMQRV-----------QLDLKETVTTGNVM 124
Query: 207 GSFYCF 212
G ++ F
Sbjct: 125 GPYFAF 130
>gi|24308263 prune [Homo sapiens]
Length = 453
Score = 28.9 bits (63), Expect = 5.1
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 44 DAKALPQNKPRP--LTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCP 98
D+ +P +P +++E++ + +RA L+ + PL PT S ++ CP
Sbjct: 364 DSMKIPSGQPETADVSREQVDKELDRASNSLISGLSQDEEDPPLPPTPMNSLVDECP 420
>gi|21264355 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin e1 [Homo sapiens]
Length = 411
Score = 28.9 bits (63), Expect = 5.1
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 60 EIAQRRERARQR--HAEKLAAAQ---GQAPLEPTQDGSAIETCPKGEEPRGDEQQVESMT 114
EIAQ E+AR+R EK AA Q Q+ + P ++ +A KGEE + D++ + T
Sbjct: 288 EIAQAEEQARKRQEEREKEAAEQAERSQSSIVPEEEQAA----NKGEEKK-DDENIPMET 342
Query: 115 PKPVLQEENNQESS 128
+ L+E + +
Sbjct: 343 EETHLEETTESQQN 356
>gi|116235474 LKB1 interacting protein [Homo sapiens]
Length = 1099
Score = 28.9 bits (63), Expect = 5.1
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 49 PQNKPRPLTQEEIAQRRERARQRHAEKLAAA-----QGQAPLEPTQDGSAIETCPKGEEP 103
P PRP +E A+ + + Q+ +E++ A + + E ++G +E +GEE
Sbjct: 474 PDTAPRPSPPQEEARGPQESPQKMSEEVRAEPQEEEEEKEGKEEKEEGEMVE---QGEEE 530
Query: 104 RGDEQQVE 111
G+E++ E
Sbjct: 531 AGEEEEEE 538
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,906,440
Number of Sequences: 37866
Number of extensions: 576339
Number of successful extensions: 1999
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1976
Number of HSP's gapped (non-prelim): 50
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.