Guide to the Human Genome
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Name: SLC17A1 Sequence: fasta or formatted (467aa) NCBI GI: 154800443
Description:

solute carrier family 17 (sodium phosphate), member 1

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         33           2
 C cysteine            3.2         15           2
 D aspartate           2.4         11           2
 E glutamate           1.9          9           1
 F phenylalanine       6.9         32           2
 G glycine             7.7         36           2
 H histidine           1.3          6           1
 I isoleucine          9.6         45           3
 K lysine              4.1         19           2
 L leucine            11.8         55           2
 M methionine          2.8         13           1
 N asparagine          3.4         16           1
 P proline             5.1         24           2
 Q glutamine           3.0         14           2
 R arginine            2.4         11           1
 S serine              8.8         41           3
 T threonine           6.0         28           1
 V valine              7.3         34           3
 W tryptophan          2.1         10           1
 Y tyrosine            3.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 17 (sodium phosphate), member... 
SLC17A3               0.458   solute carrier family 17 (sodium phosphate), member...
SLC17A4               0.456   solute carrier family 17 (sodium phosphate), member 4...
SLC17A3               0.367   solute carrier family 17 (sodium phosphate), member...
SLC17A2               0.355   solute carrier family 17 (sodium phosphate), member 2...
SLC17A5               0.305   sialin 
SLC17A8               0.239   solute carrier family 17 (sodium-dependent inorganic...
SLC17A6               0.236   solute carrier family 17 (sodium-dependent inorganic ...
SLC17A7               0.232   solute carrier family 17, member 7 
SLC17A8               0.194   solute carrier family 17 (sodium-dependent inorgani...
SLC17A9               0.088   vesicular nucleotide transporter SLC17A9 
SLC37A4               0.029   solute carrier family 37 (glucose-6-phosphate transpo...
SLC37A2               0.026   solute carrier family 37 (glycerol-3-phosphate tran...
SLC37A2               0.026   solute carrier family 37 (glycerol-3-phosphate trans...
SLC37A1               0.019   solute carrier family 37 member 1 
SLC22A7               0.012   solute carrier family 22 member 7 isoform b 
SLC22A7               0.012   solute carrier family 22 member 7 isoform a 
HTR2C                 0.011   5-hydroxytryptamine (serotonin) receptor 2C 
SLC2A13               0.009   solute carrier family 2 (facilitated glucose transp...
SLC46A1               0.008   proton-coupled folate transporter 
SLC22A15              0.008   solute carrier family 22, member 15 
MFSD9                 0.007   major facilitator superfamily domain containing 9 [...
CDS2                  0.007   phosphatidate cytidylyltransferase 2 
GNB1                  0.007   guanine nucleotide-binding protein, beta-1 subunit [...
SLC16A14              0.007   solute carrier family 16 (monocarboxylic acid transp...
LOC648809             0.005   PREDICTED: similar to elongation factor Tu GTP bind...
LOC648809             0.005   PREDICTED: similar to elongation factor Tu GTP bind...
LOC648809             0.005   PREDICTED: similar to elongation factor Tu GTP bind...
SERINC3               0.005   tumor differentially expressed protein 1 
SERINC3               0.005   tumor differentially expressed protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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