Guide to the Human Genome
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Name: LOC100132257 Sequence: fasta or formatted (157aa) NCBI GI: 239756067
Description:

PREDICTED: similar to Putative ankyrin repeat domain-containing protein ENSP00000383069

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [197aa] PREDICTED: similar to Putative ankyrin repeat domain-containing p...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         17           1
 C cysteine            3.2          5           1
 D aspartate           6.4         10           1
 E glutamate           3.8          6           1
 F phenylalanine       2.5          4           2
 G glycine             4.5          7           1
 H histidine           2.5          4           1
 I isoleucine          4.5          7           1
 K lysine              8.9         14           2
 L leucine             9.6         15           3
 M methionine          2.5          4           2
 N asparagine          7.6         12           1
 P proline             2.5          4           1
 Q glutamine           2.5          4           1
 R arginine            3.8          6           1
 S serine              4.5          7           2
 T threonine           5.1          8           2
 V valine             10.2         16           2
 W tryptophan          1.3          2           1
 Y tyrosine            3.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Putative ankyrin repeat domai... 
LOC100132257          0.942   PREDICTED: similar to Putative ankyrin repeat domai...
LOC730465             0.823   PREDICTED: similar to hCG1793014 
LOC729722             0.748   PREDICTED: ankyrin repeat domain-containing protein...
LOC729722             0.748   PREDICTED: ankyrin repeat domain-containing protein...
LOC730465             0.741   PREDICTED: similar to Putative ankyrin repeat domai...
ANKRD30A              0.656   ankyrin repeat domain 30A 
ANKRD30B              0.633   ankyrin repeat domain 30B 
LOC729549             0.585   PREDICTED: similar to hCG1793014 
LOC729549             0.585   PREDICTED: similar to hCG1793014 
LOC729549             0.571   PREDICTED: similar to UNCoordinated family member (...
ANKRD26               0.510   ankyrin repeat domain 26 
ANKRD18B              0.459   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.459   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.459   PREDICTED: ankyrin repeat domain 18B 
POTEA                 0.449   POTE ankyrin domain family, member A isoform 1 [Homo...
POTEA                 0.449   POTE ankyrin domain family, member A isoform 2 [Homo...
ANKRD20A4             0.449   ankyrin repeat domain 20 family, member A4 
ANKRD20A3             0.446   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.446   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.442   ankyrin repeat domain 20 family, member A1 
P704P                 0.439   prostate-specific P704P 
POTEH                 0.439   ANKRD26-like family C, member 3 
ANKRD7                0.439   ankyrin repeat domain 7 
POTEG                 0.435   POTE ankyrin domain family, member G 
POTEB                 0.435   protein expressed in prostate, ovary, testis, and pl...
POTEE                 0.435   protein expressed in prostate, ovary, testis, and p...
ACTBL3                0.435   PREDICTED: actin, beta-like 3 
ACTBL3                0.435   PREDICTED: actin, beta-like 3 
ACTBL3                0.435   PREDICTED: kappa-actin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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