BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239755087 PREDICTED: similar to zinc finger protein 598 [Homo sapiens] (159 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239755087 PREDICTED: similar to zinc finger protein 598 [Homo... 327 3e-90 gi|239749606 PREDICTED: similar to zinc finger protein 598 [Homo... 327 3e-90 gi|239743874 PREDICTED: similar to zinc finger protein 598 [Homo... 274 3e-74 gi|30039694 zinc finger protein 598 [Homo sapiens] 267 2e-72 gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 34 0.060 gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 34 0.060 gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ... 32 0.18 gi|33356148 formin-like 1 [Homo sapiens] 32 0.18 gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 31 0.51 gi|60460889 Myb protein P42POP [Homo sapiens] 31 0.51 gi|210032580 SET domain containing 1B [Homo sapiens] 31 0.51 gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 30 0.67 gi|38045948 ubiquitin-like modifier activating enzyme 7 [Homo sa... 30 0.67 gi|58331242 formin homology 2 domain containing 3 [Homo sapiens] 30 0.87 gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 30 0.87 gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens] 30 0.87 gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 30 1.1 gi|13273315 homeobox B4 [Homo sapiens] 30 1.1 gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 30 1.1 gi|56549694 enabled homolog isoform a [Homo sapiens] 29 1.5 gi|39930375 enabled homolog isoform b [Homo sapiens] 29 1.5 gi|31543452 PX domain containing serine/threonine kinase [Homo s... 29 1.5 gi|109689723 abl interactor 2 [Homo sapiens] 29 1.5 gi|61743948 abl-interactor 1 isoform d [Homo sapiens] 29 1.5 gi|61743946 abl-interactor 1 isoform c [Homo sapiens] 29 1.5 gi|61743944 abl-interactor 1 isoform b [Homo sapiens] 29 1.5 gi|61743942 abl-interactor 1 isoform a [Homo sapiens] 29 1.5 gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 29 1.5 gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 29 1.5 gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 29 1.5 >gi|239755087 PREDICTED: similar to zinc finger protein 598 [Homo sapiens] Length = 159 Score = 327 bits (837), Expect = 3e-90 Identities = 159/159 (100%), Positives = 159/159 (100%) Query: 1 MPPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGE 60 MPPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGE Sbjct: 1 MPPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGE 60 Query: 61 NFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCR 120 NFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCR Sbjct: 61 NFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCR 120 Query: 121 VCPTCQQVLTHGDASSHQALHAARDDDFPSLQAISRIIT 159 VCPTCQQVLTHGDASSHQALHAARDDDFPSLQAISRIIT Sbjct: 121 VCPTCQQVLTHGDASSHQALHAARDDDFPSLQAISRIIT 159 >gi|239749606 PREDICTED: similar to zinc finger protein 598 [Homo sapiens] Length = 159 Score = 327 bits (837), Expect = 3e-90 Identities = 159/159 (100%), Positives = 159/159 (100%) Query: 1 MPPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGE 60 MPPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGE Sbjct: 1 MPPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGE 60 Query: 61 NFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCR 120 NFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCR Sbjct: 61 NFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCR 120 Query: 121 VCPTCQQVLTHGDASSHQALHAARDDDFPSLQAISRIIT 159 VCPTCQQVLTHGDASSHQALHAARDDDFPSLQAISRIIT Sbjct: 121 VCPTCQQVLTHGDASSHQALHAARDDDFPSLQAISRIIT 159 >gi|239743874 PREDICTED: similar to zinc finger protein 598 [Homo sapiens] Length = 186 Score = 274 bits (700), Expect = 3e-74 Identities = 135/135 (100%), Positives = 135/135 (100%) Query: 25 SDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGENFQKVFNELLVLLPDTAKQQEILS 84 SDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGENFQKVFNELLVLLPDTAKQQEILS Sbjct: 52 SDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGENFQKVFNELLVLLPDTAKQQEILS 111 Query: 85 AHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCRVCPTCQQVLTHGDASSHQALHAAR 144 AHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCRVCPTCQQVLTHGDASSHQALHAAR Sbjct: 112 AHTDFGNREKTLSTKSKNNKKSAWQATTQQAGLDCRVCPTCQQVLTHGDASSHQALHAAR 171 Query: 145 DDDFPSLQAISRIIT 159 DDDFPSLQAISRIIT Sbjct: 172 DDDFPSLQAISRIIT 186 >gi|30039694 zinc finger protein 598 [Homo sapiens] Length = 904 Score = 267 bits (683), Expect = 2e-72 Identities = 149/225 (66%), Positives = 151/225 (67%), Gaps = 66/225 (29%) Query: 1 MPPPPGFSAVVLLKGT--------------PPPPPPGL---------------------- 24 MPPPPGFSAVVLLKGT PPP GL Sbjct: 680 MPPPPGFSAVVLLKGTPPPPPPGLVPPISKPPPGFSGLLPSPHPACVPSPATTTTTKAPR 739 Query: 25 ------------------------------SDEARFSEFKSHSGEFRQGLISAAQYYKSC 54 SDEARFSEFKSHSGEFRQGLISAAQYYKSC Sbjct: 740 LLPAPRAYLVPENFRERNLQLIQSIRDFLQSDEARFSEFKSHSGEFRQGLISAAQYYKSC 799 Query: 55 RGLLGENFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKSAWQATTQQ 114 R LLGENFQKVFNELLVLLPDTAKQQE+LSAHTDF NREK LSTKSK NKKSAWQATTQQ Sbjct: 800 RDLLGENFQKVFNELLVLLPDTAKQQELLSAHTDFCNREKPLSTKSKKNKKSAWQATTQQ 859 Query: 115 AGLDCRVCPTCQQVLTHGDASSHQALHAARDDDFPSLQAISRIIT 159 AGLDCRVCPTCQQVL HGDASSHQALHAARDDDFPSLQAI+RIIT Sbjct: 860 AGLDCRVCPTCQQVLAHGDASSHQALHAARDDDFPSLQAIARIIT 904 >gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5 [Homo sapiens] Length = 6907 Score = 33.9 bits (76), Expect = 0.060 Identities = 19/55 (34%), Positives = 30/55 (54%) Query: 52 KSCRGLLGENFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKS 106 + CR L + +K+ NE+L P A +++I + N EK L KSKN +K+ Sbjct: 3662 EECRKALEDIDEKISNEVLKSSPSYAMRRKIEEINNGLHNVEKMLQQKSKNIEKA 3716 >gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1 [Homo sapiens] Length = 6885 Score = 33.9 bits (76), Expect = 0.060 Identities = 19/55 (34%), Positives = 30/55 (54%) Query: 52 KSCRGLLGENFQKVFNELLVLLPDTAKQQEILSAHTDFGNREKTLSTKSKNNKKS 106 + CR L + +K+ NE+L P A +++I + N EK L KSKN +K+ Sbjct: 3662 EECRKALEDIDEKISNEVLKSSPSYAMRRKIEEINNGLHNVEKMLQQKSKNIEKA 3716 >gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 [Homo sapiens] Length = 1461 Score = 32.3 bits (72), Expect = 0.18 Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 2 PPPPGFSAVVLLKGTPPPPPPG 23 PPPPG + + PPPPPPG Sbjct: 1256 PPPPGEHSGIPFPTPPPPPPPG 1277 Score = 26.6 bits (57), Expect = 9.6 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 4/25 (16%) Query: 2 PPPPGFSAVVLLKG----TPPPPPP 22 PPPPG + G TPPPPPP Sbjct: 1273 PPPPGEHSSSGGSGVPFSTPPPPPP 1297 >gi|33356148 formin-like 1 [Homo sapiens] Length = 1100 Score = 32.3 bits (72), Expect = 0.18 Identities = 13/22 (59%), Positives = 13/22 (59%) Query: 2 PPPPGFSAVVLLKGTPPPPPPG 23 PPPPG V PPPPPPG Sbjct: 592 PPPPGTDGPVPPPPPPPPPPPG 613 >gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] Length = 639 Score = 30.8 bits (68), Expect = 0.51 Identities = 12/21 (57%), Positives = 14/21 (66%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPP SA ++ PPPPPP Sbjct: 586 PPPPPGSAGMMYAPPPPPPPP 606 Score = 30.8 bits (68), Expect = 0.51 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%) Query: 2 PPPPGFSAVVLLKGTPPPPPPGLSDEARF 30 PPPPG + ++ PPPPPP D + F Sbjct: 587 PPPPGSAGMMY---APPPPPPPPMDPSNF 612 Score = 26.6 bits (57), Expect = 9.6 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 1 MPPPPGFSAVVLLKGTPPPPPP 22 +P PPG L G PPPPPP Sbjct: 567 VPLPPGVQPP-LPPGAPPPPPP 587 >gi|60460889 Myb protein P42POP [Homo sapiens] Length = 399 Score = 30.8 bits (68), Expect = 0.51 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 10/77 (12%) Query: 1 MPPPPGFSAVVLLKGTPPP---PPPGLSDEARFSEFKSHSGEFRQGLISAAQYYKSCRGL 57 +PPPP + V +PPP PPP LS S +F + A + G Sbjct: 227 LPPPPPLAQVAPSPPSPPPPPRPPPTLS-------ASDPSLDFLRAQQETANAIRELAGT 279 Query: 58 LGENFQKVFNELLVLLP 74 L + K+ L LLP Sbjct: 280 LRQGLAKLSEALSALLP 296 >gi|210032580 SET domain containing 1B [Homo sapiens] Length = 1923 Score = 30.8 bits (68), Expect = 0.51 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Query: 1 MPPPPGFSAVVLLKGTPPPPPP 22 +PPPPGF L PPPPPP Sbjct: 681 LPPPPGFPP---LPPPPPPPPP 699 Score = 29.6 bits (65), Expect = 1.1 Identities = 12/21 (57%), Positives = 12/21 (57%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PP PGF L PPPPPP Sbjct: 698 PPQPGFPMPPPLPPPPPPPPP 718 >gi|56118221 amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein [Homo sapiens] Length = 666 Score = 30.4 bits (67), Expect = 0.67 Identities = 10/21 (47%), Positives = 14/21 (66%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPP ++ + + PPPPPP Sbjct: 585 PPPPSYAGIAGSELPPPPPPP 605 Score = 28.1 bits (61), Expect = 3.3 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Query: 1 MPPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKS 35 +PPPP + VL PPPPP LS E ++ K+ Sbjct: 128 LPPPP--ADPVLDLPLPPPPPEPLSQEEEEAQAKA 160 Score = 28.1 bits (61), Expect = 3.3 Identities = 11/22 (50%), Positives = 13/22 (59%) Query: 1 MPPPPGFSAVVLLKGTPPPPPP 22 +PPPP A + PPPPPP Sbjct: 583 VPPPPPSYAGIAGSELPPPPPP 604 >gi|38045948 ubiquitin-like modifier activating enzyme 7 [Homo sapiens] Length = 1012 Score = 30.4 bits (67), Expect = 0.67 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 13/86 (15%) Query: 32 EFKSHSGEFRQGLISAAQYYKSCRGLLGENFQKVFNELLVLLPDTAKQQ---------EI 82 EF ++ +++AA Y GL G ELL LLP QQ E+ Sbjct: 716 EFDTNQDTHLLYVLAAANLYAQMHGLPGSQDWTALRELLKLLPQPDPQQMAPIFASNLEL 775 Query: 83 LSAHTDFGNREKTLSTKSKNNKKSAW 108 SA +FG ++ K N W Sbjct: 776 ASASAEFGPEQQ----KELNKALEVW 797 >gi|58331242 formin homology 2 domain containing 3 [Homo sapiens] Length = 1439 Score = 30.0 bits (66), Expect = 0.87 Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 6/25 (24%) Query: 2 PPPPGFSAVVLLKGTPPPPPPGLSD 26 PPPP F G PPPPPP L D Sbjct: 849 PPPPTFL------GLPPPPPPPLLD 867 >gi|19718731 bromodomain-containing protein 4 isoform long [Homo sapiens] Length = 1362 Score = 30.0 bits (66), Expect = 0.87 Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 1 MPPPPGFSAVVLLKGTPPPPPP 22 +PPPP S L+ PPPPPP Sbjct: 958 LPPPPHPSVQQQLQQQPPPPPP 979 >gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens] Length = 1445 Score = 30.0 bits (66), Expect = 0.87 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 7 FSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQGLISAAQYYKSCRGLLGE 60 F ++ + PP PPPG +R + + SG R ISA K+CR LL E Sbjct: 80 FLLLLYVHSDPPSPPPGRKRSSREPQ-RERSGRSRSRKISA---LKACRILLRE 129 >gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] Length = 502 Score = 29.6 bits (65), Expect = 1.1 Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPPG + PPPPPP Sbjct: 383 PPPPGAGGPPMPPPPPPPPPP 403 Score = 29.3 bits (64), Expect = 1.5 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 7/21 (33%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPPG +G PPPPPP Sbjct: 359 PPPPG-------RGGPPPPPP 372 Score = 26.9 bits (58), Expect = 7.4 Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 1 MPPPPGFSAVVLLKGTPPPPPP 22 +PPPP + + PPPPPP Sbjct: 381 LPPPPPGAGGPPMPPPPPPPPP 402 >gi|13273315 homeobox B4 [Homo sapiens] Length = 251 Score = 29.6 bits (65), Expect = 1.1 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 11/27 (40%) Query: 2 PPPPGFSAVVLLKGTPPPPPPGLSDEA 28 PPPP PPPPPPGLS A Sbjct: 78 PPPP-----------PPPPPPGLSPRA 93 >gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] Length = 895 Score = 29.6 bits (65), Expect = 1.1 Identities = 13/24 (54%), Positives = 14/24 (58%) Query: 1 MPPPPGFSAVVLLKGTPPPPPPGL 24 MPPPP + PPPPPPGL Sbjct: 92 MPPPPLGLPPLQPPPPPPPPPPGL 115 >gi|56549694 enabled homolog isoform a [Homo sapiens] Length = 591 Score = 29.3 bits (64), Expect = 1.5 Identities = 12/22 (54%), Positives = 13/22 (59%) Query: 1 MPPPPGFSAVVLLKGTPPPPPP 22 +PPPPG L T PPPPP Sbjct: 330 LPPPPGPPPPPPLPSTGPPPPP 351 >gi|39930375 enabled homolog isoform b [Homo sapiens] Length = 570 Score = 29.3 bits (64), Expect = 1.5 Identities = 12/22 (54%), Positives = 13/22 (59%) Query: 1 MPPPPGFSAVVLLKGTPPPPPP 22 +PPPPG L T PPPPP Sbjct: 330 LPPPPGPPPPPPLPSTGPPPPP 351 >gi|31543452 PX domain containing serine/threonine kinase [Homo sapiens] Length = 578 Score = 29.3 bits (64), Expect = 1.5 Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 P PP S + L PPPPPP Sbjct: 503 PTPPSTSGISALPPPPPPPPP 523 >gi|109689723 abl interactor 2 [Homo sapiens] Length = 475 Score = 29.3 bits (64), Expect = 1.5 Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPP V + PPPPPP Sbjct: 365 PPPPPVEEPVFDESPPPPPPP 385 >gi|61743948 abl-interactor 1 isoform d [Homo sapiens] Length = 476 Score = 29.3 bits (64), Expect = 1.5 Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPP + + +PPPPPP Sbjct: 364 PPPPPPDDIPMFDDSPPPPPP 384 Score = 27.3 bits (59), Expect = 5.6 Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 2 PPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQG 43 PPPP + PPPPPP + E + ++ + G Sbjct: 365 PPPPPDDIPMFDDSPPPPPPPPVDYEDEEAAVVQYNDPYADG 406 >gi|61743946 abl-interactor 1 isoform c [Homo sapiens] Length = 452 Score = 29.3 bits (64), Expect = 1.5 Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPP + + +PPPPPP Sbjct: 340 PPPPPPDDIPMFDDSPPPPPP 360 Score = 27.3 bits (59), Expect = 5.6 Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 2 PPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQG 43 PPPP + PPPPPP + E + ++ + G Sbjct: 341 PPPPPDDIPMFDDSPPPPPPPPVDYEDEEAAVVQYNDPYADG 382 >gi|61743944 abl-interactor 1 isoform b [Homo sapiens] Length = 481 Score = 29.3 bits (64), Expect = 1.5 Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPP + + +PPPPPP Sbjct: 369 PPPPPPDDIPMFDDSPPPPPP 389 Score = 27.3 bits (59), Expect = 5.6 Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 2 PPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQG 43 PPPP + PPPPPP + E + ++ + G Sbjct: 370 PPPPPDDIPMFDDSPPPPPPPPVDYEDEEAAVVQYNDPYADG 411 >gi|61743942 abl-interactor 1 isoform a [Homo sapiens] Length = 508 Score = 29.3 bits (64), Expect = 1.5 Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 2 PPPPGFSAVVLLKGTPPPPPP 22 PPPP + + +PPPPPP Sbjct: 396 PPPPPPDDIPMFDDSPPPPPP 416 Score = 27.3 bits (59), Expect = 5.6 Identities = 12/42 (28%), Positives = 18/42 (42%) Query: 2 PPPPGFSAVVLLKGTPPPPPPGLSDEARFSEFKSHSGEFRQG 43 PPPP + PPPPPP + E + ++ + G Sbjct: 397 PPPPPDDIPMFDDSPPPPPPPPVDYEDEEAAVVQYNDPYADG 438 >gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo sapiens] Length = 1125 Score = 29.3 bits (64), Expect = 1.5 Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 5/20 (25%) Query: 3 PPPGFSAVVLLKGTPPPPPP 22 PPPGF G PPPPPP Sbjct: 707 PPPGFG-----PGVPPPPPP 721 >gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo sapiens] Length = 1132 Score = 29.3 bits (64), Expect = 1.5 Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 5/20 (25%) Query: 3 PPPGFSAVVLLKGTPPPPPP 22 PPPGF G PPPPPP Sbjct: 692 PPPGFG-----PGVPPPPPP 706 >gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo sapiens] Length = 1147 Score = 29.3 bits (64), Expect = 1.5 Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 5/20 (25%) Query: 3 PPPGFSAVVLLKGTPPPPPP 22 PPPGF G PPPPPP Sbjct: 707 PPPGFG-----PGVPPPPPP 721 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.131 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,257,039 Number of Sequences: 37866 Number of extensions: 425207 Number of successful extensions: 4661 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 79 Number of HSP's that attempted gapping in prelim test: 3864 Number of HSP's gapped (non-prelim): 691 length of query: 159 length of database: 18,247,518 effective HSP length: 94 effective length of query: 65 effective length of database: 14,688,114 effective search space: 954727410 effective search space used: 954727410 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.