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Search of human proteins with 239754611
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754611 PREDICTED: hypothetical protein [Homo sapiens]
(178 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754611 PREDICTED: hypothetical protein [Homo sapiens] 380 e-106
gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo ... 377 e-105
gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo ... 377 e-105
gi|239508892 PREDICTED: hypothetical protein [Homo sapiens] 377 e-105
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 42 2e-04
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 42 2e-04
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 42 4e-04
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 42 4e-04
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 41 5e-04
gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo ... 41 5e-04
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 40 0.001
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 40 0.001
gi|47933339 RNA binding motif protein 15 [Homo sapiens] 40 0.001
gi|16306552 semaphorin Y [Homo sapiens] 40 0.001
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 40 0.001
gi|146134341 hypothetical protein LOC133686 isoform 1 [Homo sapi... 40 0.001
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 39 0.002
gi|117938759 GNAS complex locus XLas [Homo sapiens] 39 0.002
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 39 0.002
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 39 0.002
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 39 0.003
gi|239752057 PREDICTED: hypothetical protein XP_002348077 [Homo ... 39 0.003
gi|33286436 gametogenetin [Homo sapiens] 39 0.003
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 38 0.004
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 37 0.007
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 37 0.007
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 37 0.007
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 37 0.007
gi|239754569 PREDICTED: similar to hCG1793472 [Homo sapiens] 37 0.009
>gi|239754611 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 380 bits (977), Expect = e-106
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP 60
MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP
Sbjct: 1 MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP 60
Query: 61 TDRRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ 120
TDRRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ
Sbjct: 61 TDRRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ 120
Query: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP 178
RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP
Sbjct: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP 178
>gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo
sapiens]
Length = 178
Score = 377 bits (969), Expect = e-105
Identities = 177/178 (99%), Positives = 177/178 (99%)
Query: 1 MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP 60
MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP
Sbjct: 1 MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP 60
Query: 61 TDRRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ 120
TD RTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ
Sbjct: 61 TDCRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ 120
Query: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP 178
RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP
Sbjct: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP 178
>gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo
sapiens]
Length = 178
Score = 377 bits (969), Expect = e-105
Identities = 177/178 (99%), Positives = 177/178 (99%)
Query: 1 MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP 60
MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP
Sbjct: 1 MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP 60
Query: 61 TDRRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ 120
TD RTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ
Sbjct: 61 TDCRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ 120
Query: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP 178
RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP
Sbjct: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP 178
>gi|239508892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 377 bits (969), Expect = e-105
Identities = 177/178 (99%), Positives = 177/178 (99%)
Query: 1 MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP 60
MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP
Sbjct: 1 MEYNCPLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP 60
Query: 61 TDRRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ 120
TD RTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ
Sbjct: 61 TDCRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQ 120
Query: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP 178
RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP
Sbjct: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHIIVLALLQPFHP 178
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/89 (38%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 70 RAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQAR 129
RA + G RP RG R P R G P AP+ R A G G PA Q+
Sbjct: 15 RARAPSGGGSGQAQRPGPGRGSWRRPPRRQRPG-PAAPSPPARGAAAWGRSGGGPAAQS- 72
Query: 130 HGAGNRHPPRQGQEED--GGGCGGRDSGG 156
G G P R G E GGG GG GG
Sbjct: 73 GGDGGGLPRRAGAEPGGRGGGSGGTMPGG 101
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 42.4 bits (98), Expect = 2e-04
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 51 PELERGGPGPTDRRTSRRLRAAIVAAASPGLHGRPAA----CRGHPRPTPA--RPPTGAP 104
P L P + + + ++ A++ P L RP A C G P P A RP G P
Sbjct: 362 PALATESPPGAEAKPTSPTGPSVCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKP 421
Query: 105 EAPALSGRAARLHGAQRGAPAG 126
P L G A G + APAG
Sbjct: 422 AQPKLEGPGAPTQGGSKEAPAG 443
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 41.6 bits (96), Expect = 4e-04
Identities = 39/145 (26%), Positives = 48/145 (33%), Gaps = 17/145 (11%)
Query: 20 KVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASP 79
++P FP GAP P + P G R +++ P
Sbjct: 6 ELPAFPRAGAP------------PLAASDTVPAAPEGAGAARPAAPLRPTSFSVLDILDP 53
Query: 80 G-LHGRPAAC--RGHPRPTPARPPTGAP--EAPALSGRAARLHGAQRGAPAGQARHGAGN 134
+ R C G P P AP APA SGR R +R A AG GA
Sbjct: 54 NKFNSRRRRCVLLGPVAPAACAPCASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAG 113
Query: 135 RHPPRQGQEEDGGGCGGRDSGGLSS 159
PP G G D+ G SS
Sbjct: 114 AEPPNAGDPFKAGEAETNDTNGYSS 138
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 41.6 bits (96), Expect = 4e-04
Identities = 47/146 (32%), Positives = 55/146 (37%), Gaps = 16/146 (10%)
Query: 18 GEKVPTFPEPGA---PFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIV 74
G + P PGA P RP P+ P ++ L R PG RR R +
Sbjct: 36 GPRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPL-RARPGCRPRRPHPAARCLPL 94
Query: 75 AAASPGL-HGRPAA---CRGHPRPTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQARH 130
P H RP G P+P P RP G A AL+G GA G Q
Sbjct: 95 RPHRPTRRHRRPGGFPLAWGSPQPAP-RPAPGRSSALALAG------GAAPGVARAQRPG 147
Query: 131 GAGNR-HPPRQGQEEDGGGCGGRDSG 155
G+G R HP G GG G D G
Sbjct: 148 GSGGRSHPGGPGSPRGGGTVGPGDRG 173
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 41.2 bits (95), Expect = 5e-04
Identities = 50/171 (29%), Positives = 58/171 (33%), Gaps = 21/171 (12%)
Query: 18 GEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAA 77
GE P PG P P P P P P GPGP + R A AA
Sbjct: 11 GESPGATPAPGPPPPPPPAPPQQQPPPP----PPPAPPPGPGPAPPQHPPRAEALPPEAA 66
Query: 78 SPG-----LHGRPAACRGHPRPTPARPPTGAPEAPALSGR----AARLHGAQRGAPAGQA 128
G L R ++C P A G+P G A G RG +
Sbjct: 67 DEGGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGPKVSFS 126
Query: 129 RHGAGNRHPPRQGQEEDGG----GCGGRDSGGLSSIFFSQRHIIVLALLQP 175
GA + P G E+ G G G G +S F QR ALLQP
Sbjct: 127 CRGAASGPAPGPGPAEEAGSEEAGPAGEPRGSQAS--FMQRQF--GALLQP 173
Score = 31.2 bits (69), Expect = 0.49
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 20/95 (21%)
Query: 18 GEKVPTFPEPGAPFMPRPQPVVVSTPCSVQ-----CHTPELERGGPGPTDRRTSRRLRAA 72
G++V FP P P P V S ++Q P++ R GP + R
Sbjct: 708 GQRVGLFPPPPPP------PQVTSAIATLQQAAAMSFCPQVARPLVGPLALGSPR----- 756
Query: 73 IVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAP 107
+V PG PA P P P P GAP +P
Sbjct: 757 LVRRPPPG----PAPAAASPGPPPPASPPGAPASP 787
>gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo
sapiens]
Length = 324
Score = 41.2 bits (95), Expect = 5e-04
Identities = 42/135 (31%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 33 PRPQ----PVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASPGLHGRPAAC 88
P PQ +T + + P P P + R ++L AI G GR A
Sbjct: 88 PHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAI------GTRGRAATA 141
Query: 89 RGHPR-------PTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQARHGAGNRHPPRQG 141
R HP PT A P PE P R+ R G RGAP + NR P G
Sbjct: 142 R-HPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGG-RGAPVQPL---SVNRRSPTPG 196
Query: 142 QEEDGGGCGGRDSGG 156
E G G G + GG
Sbjct: 197 GREAGEGEGRTEGGG 211
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 40.0 bits (92), Expect = 0.001
Identities = 40/146 (27%), Positives = 54/146 (36%), Gaps = 10/146 (6%)
Query: 17 SGEKVPTFPEPGAPFMPRPQ-PVVVSTPCSVQCHTPELER-GGPGPTDRRTSRRLRAAIV 74
SG P+ P R Q P STP ++P + + GG GP ++ ++ +
Sbjct: 2266 SGSPAPSTSGTSTPRRGRRQLPQTPSTPRPHVSYSPVIRKAGGSGPPQQQQQQQQQQQQQ 2325
Query: 75 AAASPGLHGRPAACRGHPRPTPA-----RPPTGAPEAPALSGRAARLHGAQRGAPAGQAR 129
A A PG + R +P PT RPPTG + R+ G R R
Sbjct: 2326 AVARPG-RAATSGPRRYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRACR 2384
Query: 130 HGAGNRHPPRQGQEEDGGGCGGRDSG 155
HG P G G G R G
Sbjct: 2385 HGGARW--PASGPHVSEGPPGPRHHG 2408
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 40.0 bits (92), Expect = 0.001
Identities = 45/154 (29%), Positives = 56/154 (36%), Gaps = 24/154 (15%)
Query: 6 PLTRACKNHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRT 65
P R + + VP PE RP + T SV L+ P ++
Sbjct: 412 PAKRTARRRXXXXDTVPAAPEGAGA--ARPAAPLRPTSFSV------LDILDP---NKFN 460
Query: 66 SRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQRGAPA 125
SRR R ++ +P AAC P AP APA SGR R +R A A
Sbjct: 461 SRRRRCVLLGPVAP------AAC------APCASAPCAP-APAASGRPPRAEELERRALA 507
Query: 126 GQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSS 159
G GA PP G G D+ G SS
Sbjct: 508 GAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSS 541
>gi|47933339 RNA binding motif protein 15 [Homo sapiens]
Length = 977
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 53 LERGGPGPTDRRTSRRLRAAIVAAASPG-----LHG----RPAACRGHPR-PTPARPPTG 102
+ G P RR+ R RA + S G L G RPA +G R P A+ G
Sbjct: 1 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG 60
Query: 103 APEAPALSGRAARLHGA--QRGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGGLSS 159
++ + R+ +L G+ G+ +G+ G G+R + GG D+GG SS
Sbjct: 61 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSS 119
>gi|16306552 semaphorin Y [Homo sapiens]
Length = 930
Score = 40.0 bits (92), Expect = 0.001
Identities = 49/141 (34%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 25 PEPGAPFMPRPQPVVVSTPCSV--QCHTPELERGGPGPTDRRTSRRLRAAIVAAASPGLH 82
P PG P Q V V+T + H P+ R G P TSR A+ +P L
Sbjct: 753 PPPGCP----GQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSR----ALPPEPAPALL 804
Query: 83 GRPAACRGHPRPTPAR---PPTG----APEAPALSGRAARLHGAQRGAPAGQARHGAGNR 135
G P+ R H +P R PP G AP PALS A RL G G+ +G+R
Sbjct: 805 GGPSP-RPHECASPLRLDVPPEGRCASAPARPALSAPAPRL-----GVGGGRRLPFSGHR 858
Query: 136 HPPRQGQEEDGGGCGGRDSGG 156
PP GG R SGG
Sbjct: 859 APPALLTRVPSGG-PSRYSGG 878
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/138 (28%), Positives = 45/138 (32%), Gaps = 13/138 (9%)
Query: 22 PTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASPGL 81
P P+P P P P S P Q GPGP S ++ A+P
Sbjct: 88 PPHPQPHQQQQPPPPPQDSSKPVVAQ---------GPGPAPGVGSAPPASSSAPPATPPT 138
Query: 82 HGRPAACRGHPRPTPARPPTGAPEA---PALSGRAARLHGAQRGAPAGQARHGAGNRHPP 138
G P P PTP T AP P Q G P G P
Sbjct: 139 SGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP 198
Query: 139 RQGQEEDGGGCGGRDSGG 156
+QG GG GG+ GG
Sbjct: 199 KQG-PGPGGPKGGKMPGG 215
>gi|146134341 hypothetical protein LOC133686 isoform 1 [Homo
sapiens]
Length = 442
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 111 GRAARLHGAQRGAPAGQARHGA--GNRHPPRQGQEEDGGGCGGRDSGGLSSIFFSQRHII 168
GRAA L G G PA + R G G R QGQ + GCG R GG F ++
Sbjct: 18 GRAAALRGPGAGGPAARPRLGGDGGGRRHLGQGQPRELAGCGSRADGG-----FRPSRVV 72
Query: 169 VLA 171
V+A
Sbjct: 73 VVA 75
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 39.3 bits (90), Expect = 0.002
Identities = 41/131 (31%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 30 PFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASPGLHGRPAACR 89
P P P + TP P L+ P +AA A S RP R
Sbjct: 269 PTSPHQPPRLPVTPVPQSVALPSLQSARPAAAGAAPRLSPQAARCTALSTEKPDRPGPPR 328
Query: 90 GHPRPTPARPPT--GAP-EAPALSGRAARLHGAQRGAPAGQARHGA--GNRHPP----RQ 140
P PTP PT AP +A L R R PA ++R+ A RH P R+
Sbjct: 329 RPPAPTPVSAPTLRSAPLDAHRLRERLPESSVGPRAEPARRSRNAAMVSPRHQPGKARRE 388
Query: 141 G-QEEDGGGCG 150
G EE G CG
Sbjct: 389 GLWEEAVGTCG 399
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 75 AAASPGLHGRPAACRGHP-RPTPARPPTGAPEAPALSG-RAARLHGAQRGAPAGQARHGA 132
A A+P PAA PA P GAP APA S RAA++ A APA AR
Sbjct: 467 AGAAPEAPAAPAAAETRAAHVAPAAPDAGAPTAPAASATRAAQVRRAASAAPASGARRKI 526
Query: 133 GNRHPPRQGQEED 145
R P + Q D
Sbjct: 527 HLRPPSPEIQAAD 539
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 38.9 bits (89), Expect = 0.002
Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 53 LERGGPGPTDRRTSRRLRAAIVAAASPGLHGRPA----ACRGHPRPTPARPPTGAPEAPA 108
LE G G R R L+ A+P HGR A A RG R A GA A
Sbjct: 119 LELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARG--RGVEAAAGAGAQRAAQ 176
Query: 109 LSGRAARLHGAQRGAPAGQARHGAGNRHPPRQGQEEDGGGCGG 151
G R H A GA + A + +G G GCGG
Sbjct: 177 AVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGG 219
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 38.9 bits (89), Expect = 0.002
Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 53 LERGGPGPTDRRTSRRLRAAIVAAASPGLHGRPA----ACRGHPRPTPARPPTGAPEAPA 108
LE G G R R L+ A+P HGR A A RG R A GA A
Sbjct: 268 LELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARG--RGVEAAAGAGAQRAAQ 325
Query: 109 LSGRAARLHGAQRGAPAGQARHGAGNRHPPRQGQEEDGGGCGG 151
G R H A GA + A + +G G GCGG
Sbjct: 326 AVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGG 368
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 38.9 bits (89), Expect = 0.002
Identities = 34/103 (33%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 53 LERGGPGPTDRRTSRRLRAAIVAAASPGLHGRPA----ACRGHPRPTPARPPTGAPEAPA 108
LE G G R R L+ A+P HGR A A RG R A GA A
Sbjct: 268 LELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARG--RGVEAAAGAGAQRAAQ 325
Query: 109 LSGRAARLHGAQRGAPAGQARHGAGNRHPPRQGQEEDGGGCGG 151
G R H A GA + A + +G G GCGG
Sbjct: 326 AVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGG 368
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 38.5 bits (88), Expect = 0.003
Identities = 39/133 (29%), Positives = 45/133 (33%), Gaps = 35/133 (26%)
Query: 22 PTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASPGL 81
P P P P P+ V + +R PGP++ R A
Sbjct: 122 PALPTWSVPNGPSPEEV------------EQQKRQQPGPSEHIERRVSNAG--------- 160
Query: 82 HGRPAACRGHPRPTPA-RPPTGAPEAPAL--SGRAARLHGAQRGAPAGQARHGAGNRHPP 138
G PA G P P P PP G P P L SG A HGA G P PP
Sbjct: 161 -GPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPA----------PP 209
Query: 139 RQGQEEDGGGCGG 151
+ GGG G
Sbjct: 210 LPAAQGPGGGGAG 222
Score = 30.4 bits (67), Expect = 0.84
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 79 PGL--HGRPAACRGHPRPTPARPPTGAPEAP-----ALSGRAARLHGAQRGAPAGQARHG 131
PGL G PAA G P PP A + P G AA + GA+ + Q
Sbjct: 186 PGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGGGAGAPGLAAAIAGAKLRKVSKQEEAS 245
Query: 132 AGNRHPPRQGQEEDGGG 148
G P + GGG
Sbjct: 246 GGPTAPKAESGRSGGGG 262
>gi|239752057 PREDICTED: hypothetical protein XP_002348077 [Homo
sapiens]
Length = 344
Score = 38.5 bits (88), Expect = 0.003
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 63 RRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGA--PEAPALSGRAARLHGAQ 120
+R+SRR R A +A AS G PAA P P+ A P A P P +
Sbjct: 4 KRSSRRTRTAGLARAS-GAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGR 62
Query: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGC 149
G G+A+HG R P + E C
Sbjct: 63 VGRQRGRAQHGVHGRRAPLTARREAARAC 91
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 38.5 bits (88), Expect = 0.003
Identities = 44/153 (28%), Positives = 55/153 (35%), Gaps = 24/153 (15%)
Query: 22 PTF----PEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRL-------R 70
PTF P G P P P + P P L+ PT + L
Sbjct: 414 PTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPALQPTPLPVAPPLTPGLGHKE 473
Query: 71 AAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSG----------RAARLHG-- 118
+A+ A+P L AA + P P+PA PT A +P +S R R G
Sbjct: 474 SALAPTAAPALPPALAADQA-PAPSPAPAPTVAEPSPPVSAPAPAAAPIKTRTRRNKGSR 532
Query: 119 AQRGAPAGQARHGAGNRHPPRQGQEEDGGGCGG 151
A RGA HG G R + GG GG
Sbjct: 533 AARGATRKDGLHGDGPRERATATVPDSSGGGGG 565
Score = 28.1 bits (61), Expect = 4.1
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 40/136 (29%)
Query: 13 NHLGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGP---TDRRTS-RR 68
+H G G+ P+ P PR V + P + P LE P P ++R+ + RR
Sbjct: 129 SHRGQGDP-PSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKPPPPLPSERQPADRR 187
Query: 69 LRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQA 128
+ A+ TPA PPT + P +G AG+A
Sbjct: 188 ITPALA--------------------TPASPPTESQAGP-----------RNQGQTAGRA 216
Query: 129 RHGAGNRHPPRQGQEE 144
R GA PP G+ E
Sbjct: 217 RGGA----PPHAGEGE 228
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 38.1 bits (87), Expect = 0.004
Identities = 41/127 (32%), Positives = 45/127 (35%), Gaps = 11/127 (8%)
Query: 41 STPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARP- 99
S P + P R PGP R S L A A P A R P P PA P
Sbjct: 470 SGPRGARDSPPGSPRRRPGPGPRSASASLLPD--AFALTAFECEPQALRRPPGPFPAAPA 527
Query: 100 -PTGAP--EAPALSGRAARLHGAQRGAPAGQARHGAGNRHPPRQGQEEDGGGCGGRDSGG 156
P GA EAP A R G P A AG+ P + GG GG
Sbjct: 528 APDGADPGEAPTPPSSAQRSPG-----PRPSAHSHAGSLRPGLSASWGEPGGLRAAGGGG 582
Query: 157 LSSIFFS 163
+S F S
Sbjct: 583 STSSFLS 589
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 37.4 bits (85), Expect = 0.007
Identities = 45/167 (26%), Positives = 55/167 (32%), Gaps = 46/167 (27%)
Query: 16 GSGEKVPTFP---EPGAPFMPRPQPVVVSTPCS-VQCHTPELERGGPGPTDRRTSRRLR- 70
G G++ PT P +P P P+ +P P V C G P R TS +
Sbjct: 1195 GGGDEPPTSPRQLQPAPPLAPQGRPWTPGQPGGLVGC-----PGSGGSPMRRETSAGFQN 1249
Query: 71 ----AAIVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQRGAPAG 126
AI PGL P+P P PP P + GR L G G
Sbjct: 1250 GLNYIAIDVREEPGLP---------PQPQPPPPPLPQPGDKSSWGRTRSLGGLISAVGVG 1300
Query: 127 QARHGAGNRHPPRQGQEEDGGGCGGRDSGGL------SSIFFSQRHI 167
GGGCGG G L +SI F H+
Sbjct: 1301 ST-----------------GGGCGGPGPGALPPANTYASIDFLSHHL 1330
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 37.4 bits (85), Expect = 0.007
Identities = 37/127 (29%), Positives = 45/127 (35%), Gaps = 20/127 (15%)
Query: 15 LGSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERG--GPGPTDRRTSRRLRAA 72
LGSG P P PG+ P P P + P + G G GP
Sbjct: 228 LGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPP----------- 276
Query: 73 IVAAASPGLHGRPAACRGHPRPTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQARHGA 132
+A +PG G P HP P PP G P P +S HG G+
Sbjct: 277 --SAGTPGA-GHPGHGHSHPHPF---PPGGMPH-PGMSQMQLAHHGPHGLGHPHAGPPGS 329
Query: 133 GNRHPPR 139
G + PPR
Sbjct: 330 GGQPPPR 336
Score = 26.9 bits (58), Expect = 9.2
Identities = 32/110 (29%), Positives = 35/110 (31%), Gaps = 41/110 (37%)
Query: 16 GSGEKVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVA 75
GSG + P P PG MP P P + P RG P
Sbjct: 328 GSGGQPPPRPPPG---MPHPGPPPMGMP----------PRGPP----------------- 357
Query: 76 AASPGLHGRPAACRGHPRPTPARPP---TGAPEAPALSGRAARLHGAQRG 122
SP H P G P P PP TG P P +G QRG
Sbjct: 358 FGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPP--------YGYQRG 399
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 37.4 bits (85), Expect = 0.007
Identities = 40/138 (28%), Positives = 52/138 (37%), Gaps = 36/138 (26%)
Query: 20 KVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASP 79
+VPT P P P PV ++TP S + P P +D S A+ V
Sbjct: 579 EVPTVPAEA----PAPSPVPLTTPASAEEAIPL-----PASSDSERS----ASSVEGPGG 625
Query: 80 GLHGR-------PAACRGH-------PRPTPARPPTGAPEAPALSGRAARLHGAQRGAPA 125
L+ R PA RG P P +PP P PA + + +HG A A
Sbjct: 626 ALYARVARREARPARARGEIGGLSLSPSPERRKPP---PPDPATKPKVSWIHGKHSAAAA 682
Query: 126 GQARHGAGNRHPPRQGQE 143
G+A PP G E
Sbjct: 683 GRA------PSPPPPGSE 694
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 37.4 bits (85), Expect = 0.007
Identities = 40/138 (28%), Positives = 52/138 (37%), Gaps = 36/138 (26%)
Query: 20 KVPTFPEPGAPFMPRPQPVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASP 79
+VPT P P P PV ++TP S + P P +D S A+ V
Sbjct: 574 EVPTVPAEA----PAPSPVPLTTPASAEEAIPL-----PASSDSERS----ASSVEGPGG 620
Query: 80 GLHGR-------PAACRGH-------PRPTPARPPTGAPEAPALSGRAARLHGAQRGAPA 125
L+ R PA RG P P +PP P PA + + +HG A A
Sbjct: 621 ALYARVARREARPARARGEIGGLSLSPSPERRKPP---PPDPATKPKVSWIHGKHSAAAA 677
Query: 126 GQARHGAGNRHPPRQGQE 143
G+A PP G E
Sbjct: 678 GRA------PSPPPPGSE 689
>gi|239754569 PREDICTED: similar to hCG1793472 [Homo sapiens]
Length = 219
Score = 37.0 bits (84), Expect = 0.009
Identities = 38/126 (30%), Positives = 45/126 (35%), Gaps = 3/126 (2%)
Query: 33 PRPQPVVVSTPCSVQCHTPELERGGPGPT-DRRTSRRLRAAIVAAASPGLHGRPAACRGH 91
P P P V P S Q + L PGP D R + GLH RP+ C
Sbjct: 60 PGPAPPVSQWPLSAQPSSC-LPAAFPGPAFDFRRPLQTPTRPGLLPPEGLH-RPSLCLTA 117
Query: 92 PRPTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQARHGAGNRHPPRQGQEEDGGGCGG 151
P PAR A SG +A G+ HGA + P Q Q GG G
Sbjct: 118 DSPRPARSRLTAASRVQSSGLSAASAGSTAACQWPLQPHGAHSSQRPFQAQFFPSGGLSG 177
Query: 152 RDSGGL 157
S +
Sbjct: 178 PRSSSM 183
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,981,147
Number of Sequences: 37866
Number of extensions: 802027
Number of successful extensions: 7282
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 911
Number of HSP's that attempted gapping in prelim test: 5456
Number of HSP's gapped (non-prelim): 2433
length of query: 178
length of database: 18,247,518
effective HSP length: 96
effective length of query: 82
effective length of database: 14,612,382
effective search space: 1198215324
effective search space used: 1198215324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.