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Search of human proteins with 239754599
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]
(294 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754599 PREDICTED: hypothetical protein [Homo sapiens] 597 e-171
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 294 7e-80
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ... 279 2e-75
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 268 3e-72
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 262 2e-70
gi|239756562 PREDICTED: hypothetical protein [Homo sapiens] 251 7e-67
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 241 7e-64
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ... 229 2e-60
gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo ... 229 3e-60
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 82 6e-16
gi|4885379 histone cluster 1, H1e [Homo sapiens] 55 6e-08
gi|4885381 histone cluster 1, H1b [Homo sapiens] 47 2e-05
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 47 2e-05
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 47 3e-05
gi|153070260 myristoylated alanine-rich protein kinase C substra... 46 3e-05
gi|4885377 histone cluster 1, H1d [Homo sapiens] 46 4e-05
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|5174449 H1 histone family, member X [Homo sapiens] 43 4e-04
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|116006967 neuregulin 1 isoform GGF2 [Homo sapiens] 42 8e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 8e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 8e-04
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239508698 PREDICTED: similar to mucin [Homo sapiens] 41 0.001
gi|115511036 alpha-kinase 3 [Homo sapiens] 41 0.001
gi|149274655 synapse defective 1, Rho GTPase, homolog 2 [Homo sa... 41 0.001
>gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 597 bits (1540), Expect = e-171
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 1 MRGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATL 60
MRGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATL
Sbjct: 1 MRGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATL 60
Query: 61 SGRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPC 120
SGRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPC
Sbjct: 61 SGRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPC 120
Query: 121 QDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAE 180
QDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAE
Sbjct: 121 QDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAE 180
Query: 181 ESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLT 240
ESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLT
Sbjct: 181 ESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLT 240
Query: 241 PNSLASVSFSRPMFLRHYPFSSCECKSHKHGSTFDHFNCLTFHVTRPSTIESMY 294
PNSLASVSFSRPMFLRHYPFSSCECKSHKHGSTFDHFNCLTFHVTRPSTIESMY
Sbjct: 241 PNSLASVSFSRPMFLRHYPFSSCECKSHKHGSTFDHFNCLTFHVTRPSTIESMY 294
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 294 bits (752), Expect = 7e-80
Identities = 170/267 (63%), Positives = 182/267 (68%), Gaps = 25/267 (9%)
Query: 1 MRGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATL 60
MRG DQMEIRGGPYLLLGE VGHSALGAQP QAA GDADELLEL ALLQ AGRGPCATL
Sbjct: 1 MRGLDQMEIRGGPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATL 60
Query: 61 SGRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPC 120
ITPA ALLLLSH L AQ R MQAT A+AGSPG GRLGKEP RESWT SAPRRCP
Sbjct: 61 RSHPITPAPALLLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPY 120
Query: 121 QDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAE 180
QDASRAGS VCRSRPQ+RGGG +KPRR+ A AKS GGGGKKPR QK A AG K
Sbjct: 121 QDASRAGSRVCRSRPQNRGGGDKKPRRRGQKA--AKSRGGGGKKPRGQKAAGAGAKK--- 175
Query: 181 ESRRGGGKKPRRGGQKAVGAGAKKPQKA-------------AAAGTKTPRRRR-QKAAKA 226
+KPRR G++A AG KK QKA AAAG K PRRRR QKAAK+
Sbjct: 176 ------HRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRGQKAAKS 229
Query: 227 AVWGQKAAAGESLTPNSLASVSFSRPM 253
G K + + S +P+
Sbjct: 230 RGGGDKKLERQKAALTGVKSRGDKKPL 256
Score = 59.7 bits (143), Expect = 3e-09
Identities = 48/117 (41%), Positives = 55/117 (47%), Gaps = 33/117 (28%)
Query: 112 GSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCA 171
G PRR Q A++ SRGGG +K RQKAA KS G KKP R
Sbjct: 215 GKKPRRRRGQKAAK-----------SRGGGDKKLERQKAALTGVKS--RGDKKPLR---- 257
Query: 172 AAGQKAAAEESRRGGGKKPRRGGQ--KAVGAGAKKPQKAAAAGTKTPRRRRQKAAKA 226
GGKK R GQ K+ G G +KPQKAAAAG K+ R +K KA
Sbjct: 258 --------------GGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKA 300
>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
sapiens]
Length = 337
Score = 279 bits (714), Expect = 2e-75
Identities = 165/271 (60%), Positives = 182/271 (67%), Gaps = 30/271 (11%)
Query: 1 MRGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATL 60
MRG DQM IR GPYLLLGEV+GHSALGAQPAQAANGDADELLEL ALLQ AGRGPCA+L
Sbjct: 1 MRGLDQMAIREGPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQRPAGRGPCASL 60
Query: 61 SGRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPC 120
+TPATALLLLSH RAQ R M+A AA+ SPG RLGKEP RESWT SAP RC
Sbjct: 61 RDSRVTPATALLLLSHCSRAQRRSMRAAAAQERSPGRRRLGKEPLIRESWTRSAPWRCLS 120
Query: 121 QDASRAGSGVCRSRPQSRGGGSRKPRR------------------QKAAAAQAKSLGGGG 162
QDA RAGS VC S PQ+RGGG +K +R QKAA A AKS GGGG
Sbjct: 121 QDAGRAGSQVCGSSPQTRGGGGKKLQRQKATVMGAKSRKKPQHWGQKAATAGAKSPGGGG 180
Query: 163 KKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTK-------T 215
KKP ++K AA G+K A +SR GGGKKPRR +K AGAK PQKAAAAG K
Sbjct: 181 KKPGQEKPAATGEKTRAAKSRGGGGKKPRR--EKPAAAGAKNPQKAAAAGAKFREAGGRK 238
Query: 216 PRRRRQKAAKAAVWGQKAAAGESLTPNSLAS 246
PR R QKA +A G K+ G + P A+
Sbjct: 239 PRWRGQKATEA---GAKSRGGGGIKPQKPAA 266
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 268 bits (686), Expect = 3e-72
Identities = 154/251 (61%), Positives = 175/251 (69%), Gaps = 24/251 (9%)
Query: 12 GPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATAL 71
GPYLLLGEV+GHSALGAQ AQ ANGDADELLEL ALLQ G PCA+L +TPATAL
Sbjct: 19 GPYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHPTGCDPCASLRDSRVTPATAL 78
Query: 72 LLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVC 131
LLLSHR RAQ R +QA AA+ S G G LGKEPPS+ESWT S PRRC QDA R+GS VC
Sbjct: 79 LLLSHRGRAQRRSIQAAAAQEQSTGRGCLGKEPPSQESWTRSDPRRCLSQDAVRSGSRVC 138
Query: 132 RSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRR--QKCAAA---------------- 173
RSRPQ+RGGG ++PRRQKAA A AKS GG GKKP+R QK A A
Sbjct: 139 RSRPQTRGGGGKQPRRQKAAVAGAKSRGGEGKKPQRRGQKAATAGAKSRGGGVRSLGGKK 198
Query: 174 ---GQKAAAEESRRGGGKKPRRGGQKAVGAG---AKKPQKAAAAGTKTPRRRRQKAAKAA 227
GQK AA R GGGK+PRR GQKA +G + PQKAAA G K+ ++ RQ+ KAA
Sbjct: 199 MRRGQKGAAGAKRCGGGKQPRRRGQKASKSGGVRCQTPQKAAAQGVKSRKKLRQRGQKAA 258
Query: 228 VWGQKAAAGES 238
GQ+AAAG++
Sbjct: 259 AAGQEAAAGKT 269
Score = 52.0 bits (123), Expect = 6e-07
Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
Query: 91 EAGSPGLGRLGK-EPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRR-Q 148
+ G+ G R G + P R S CQ +A + +SR + R G + Q
Sbjct: 203 QKGAAGAKRCGGGKQPRRRGQKASKSGGVRCQTPQKAAAQGVKSRKKLRQRGQKAAAAGQ 262
Query: 149 KAAAAQA------KSLGGGGKKPRR-------QKCAAAGQKAAAEESRRGGGKKPRRGGQ 195
+AAA + K GGG KKP R QK AAAG K + + GG ++ + Q
Sbjct: 263 EAAAGKTCGGGGEKHRGGGDKKPLRKNSRWRGQKAAAAGGKKPQKAAAAGGERRKKLRRQ 322
Query: 196 KAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAA 235
KA A AK P+K PR R Q + V GQ++ A
Sbjct: 323 KAAVARAKSPKK--------PRWRGQNSGN-GVEGQRSLA 353
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 262 bits (670), Expect = 2e-70
Identities = 159/262 (60%), Positives = 176/262 (67%), Gaps = 38/262 (14%)
Query: 13 PYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATALL 72
PYLLLGEV+GHSALGAQPAQAANGDADELLEL ALLQ AG PCA+L +TPATALL
Sbjct: 20 PYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQLPAGCDPCASLRDSRVTPATALL 79
Query: 73 LLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCR 132
LSHR RAQ R M A AA+ S G G LGKEPP+RESWT S PR C QDASR+GS VCR
Sbjct: 80 PLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRSDPRHCISQDASRSGSRVCR 139
Query: 133 SRPQSRGGGSRKPRRQKAAAAQAKSLGG--------------------------GGKKPR 166
SRPQ+RGGG +KPRRQK AAA AKS GG GGKKPR
Sbjct: 140 SRPQTRGGGGKKPRRQKDAAAGAKSRGGKKPRRGRKPRRRGQKSTAAGAKSRGEGGKKPR 199
Query: 167 RQKCAAAGQKAAA--EESRRGGGKKPRRGGQKAV-----GAGAKKPQKAAAAGTKT---P 216
+QK AAAG K+ ++SRR G KKP R GQ+AV G G KKPQKAAA G K+ P
Sbjct: 200 QQKPAAAGAKSGLGDKKSRRWGRKKPGRWGQEAVAGETCGGGGKKPQKAAAPGAKSHKKP 259
Query: 217 RRRRQKAA--KAAVWGQKAAAG 236
RR+ QKAA K AV G ++ G
Sbjct: 260 RRQWQKAAAEKVAVAGAESCGG 281
Score = 45.8 bits (107), Expect = 4e-05
Identities = 56/165 (33%), Positives = 69/165 (41%), Gaps = 41/165 (24%)
Query: 49 QPRAGRGPCATLSGRCITPATALLLLSHRLRAQCRPMQATAAEAGSP-GLG-----RLGK 102
+PR GR P G+ T A A R +P Q A AG+ GLG R G+
Sbjct: 169 KPRRGRKP--RRRGQKSTAAGA----KSRGEGGKKPRQQKPAAAGAKSGLGDKKSRRWGR 222
Query: 103 EPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGS-RKPRRQ-------KAAAAQ 154
+ P R A C G G + + G S +KPRRQ K A A
Sbjct: 223 KKPGRWGQEAVAGETC-------GGGGKKPQKAAAPGAKSHKKPRRQWQKAAAEKVAVAG 275
Query: 155 AKSLGGGGKKPRRQKCAAAGQKAAAEESRRG--GGKKPRRGGQKA 197
A+S GG GQKAAA ++ G GGKK RR GQ+A
Sbjct: 276 AESCGG------------RGQKAAAARAKSGGFGGKKQRRRGQRA 308
>gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 251 bits (640), Expect = 7e-67
Identities = 151/233 (64%), Positives = 164/233 (70%), Gaps = 29/233 (12%)
Query: 2 RGPDQMEIRGGPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLS 61
RGP ++G PYLLLGEVVGHSALGAQPAQAA DE+LEL ALLQ AGR PCA+
Sbjct: 7 RGPHTPYLQG-PYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCASHR 61
Query: 62 GRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQ 121
GR ITPATALLLLSHR RA+ R MQA AA+AGSPG R+GK PPSRESWT SAP+RCP Q
Sbjct: 62 GRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRCPSQ 121
Query: 122 DASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEE 181
DA RAGS VCRSRPQSRGG QKAAA+ AK G GGK+PRRQK AAAG K+ +
Sbjct: 122 DAGRAGSRVCRSRPQSRGG-------QKAAASGAKRRGVGGKEPRRQKPAAAGAKSRGGK 174
Query: 182 SRRGGGKKPRRGGQKAV-----GAGAKKPQKAAAAGTKT--------PRRRRQ 221
S KKPRR GQKA G G KPQKAAAAG K PRR R+
Sbjct: 175 SH----KKPRRRGQKAAPAKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 241 bits (614), Expect = 7e-64
Identities = 155/259 (59%), Positives = 169/259 (65%), Gaps = 29/259 (11%)
Query: 12 GPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATAL 71
G YLLLGEV+GHSALGAQ AQ ANGDADELLEL ALLQ AG PCA+L C+TPATAL
Sbjct: 19 GLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCASLRDSCVTPATAL 78
Query: 72 LLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVC 131
LLLSHR + Q R MQA AA+ S G G LGKEPP ES T S PRRC QDASR+GS VC
Sbjct: 79 LLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVC 138
Query: 132 RSRPQSRGGGSRKPRR-QKAAAAQAKSLGG-----GGKKPRR--QKCAAAG--------- 174
RSRPQ+RGGG +KPRR QKAA A AKS GG GGKK RR QK AAAG
Sbjct: 139 RSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGK 198
Query: 175 --QKAAAEESRRGGGKKPRRGGQKAVGAG----AKKPQKAAAAGTKTPRRRRQKAAKAA- 227
QKA A +RR G KK RR G+KA AG KK ++ G K PRRR QKAA A
Sbjct: 199 KPQKARAVGARRRGWKKLRRRGKKAAAAGGEKAGKKLRQQGEKGRKKPRRRGQKAAAAGG 258
Query: 228 -----VWGQKAAAGESLTP 241
QKAAA + +P
Sbjct: 259 ERCKKPRRQKAAAVSAKSP 277
Score = 45.1 bits (105), Expect = 8e-05
Identities = 47/136 (34%), Positives = 58/136 (42%), Gaps = 40/136 (29%)
Query: 89 AAEAGSPGLGRLGKEPPS-------RESWTGSAPR--RCPCQDASRAGSGVC------RS 133
AA AG+ G GK+P R W R + +AG + R
Sbjct: 185 AAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKAGKKLRQQGEKGRK 244
Query: 134 RPQSRG------GGSR--KPRRQKAAAAQAKSLGGGGKKPRRQKCAAA------------ 173
+P+ RG GG R KPRRQKAAA AKS KKPRR+ +A
Sbjct: 245 KPRRRGQKAAAAGGERCKKPRRQKAAAVSAKS----PKKPRRRVLNSARLGAESRKNPQR 300
Query: 174 -GQKAAAEESRRGGGK 188
GQK+ A +SR G GK
Sbjct: 301 RGQKSMAAKSRVGSGK 316
>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
sapiens]
Length = 231
Score = 229 bits (584), Expect = 2e-60
Identities = 139/228 (60%), Positives = 152/228 (66%), Gaps = 21/228 (9%)
Query: 12 GPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATAL 71
G YLLLGEV+GHSALGAQ AQ ANGDADELLEL ALLQ AG PCA+L C+TPATAL
Sbjct: 19 GLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCASLRDSCVTPATAL 78
Query: 72 LLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVC 131
LLLSHR + Q R MQA AA+ S G G LGKEPP ES T S PRRC QDASR+GS VC
Sbjct: 79 LLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVC 138
Query: 132 RSRPQSRGGGSRKPRR-QKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKP 190
RSRPQ+RGGG +KPRR QKAA A AKS GGG + +K GQKAAA
Sbjct: 139 RSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAA----------- 187
Query: 191 RRGGQKAVGAGAKKPQKAAAAGT-----KTPRRRRQKAAKAAVWGQKA 233
G K+ G G KKPQKA A G K RRR +KAA A G+KA
Sbjct: 188 --AGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAG--GEKA 231
>gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo
sapiens]
Length = 240
Score = 229 bits (583), Expect = 3e-60
Identities = 135/227 (59%), Positives = 151/227 (66%), Gaps = 22/227 (9%)
Query: 12 GPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATAL 71
GPYLLLGEV+GHSALGAQPAQAANGDADELLEL ALLQ AG PCA+L +TPATAL
Sbjct: 19 GPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQLPAGCDPCASLRDSRVTPATAL 78
Query: 72 LLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVC 131
L LSHR RAQ R M A AA+ S G G LGKEPP+RESWT S PR C QDASR+GS VC
Sbjct: 79 LPLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRSDPRHCISQDASRSGSRVC 138
Query: 132 RSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPR 191
RSRPQ+RG G +K R++ AA K+ G KKP RQK A G K SR G GKKP+
Sbjct: 139 RSRPQTRGSGGKKLRQRGEKAAAVKTCSGRSKKPGRQKAAVMGAK-----SRGGRGKKPQ 193
Query: 192 R----------GGQKAVGAGAKKP----QKAAAAGTKT---PRRRRQ 221
+ GG K +G KKP QKAA G K+ P+RR Q
Sbjct: 194 KAAAAGAKSCNGGGKKLGRWGKKPGRRGQKAAVTGAKSRKKPQRRGQ 240
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 82.0 bits (201), Expect = 6e-16
Identities = 68/183 (37%), Positives = 86/183 (46%), Gaps = 39/183 (21%)
Query: 83 RPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGS 142
+P +A AA A S R GK+P R + + + Q +++ G ++RGG
Sbjct: 173 KPQKAAAAGAKS----RSGKKPRRRGAKSRGDEDKKGRQREAKSRFG------KTRGGRR 222
Query: 143 RKPRRQKAAAAQAKSLGGGGKKPRRQKC----AAAGQKAAAEESRRGGGKKPRRGGQKAV 198
+K RR K AA AKS GGGKKP++Q+ AA G K+ +SR GG KK RR GQ A
Sbjct: 223 KKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAA 282
Query: 199 GAGAKKPQKAAAA-------------------------GTKTPRRRRQKAAKAAVWGQKA 233
AGAK+ A A G K PRRR QKA KAA G K
Sbjct: 283 LAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKR 342
Query: 234 AAG 236
G
Sbjct: 343 GGG 345
Score = 79.3 bits (194), Expect = 4e-15
Identities = 64/176 (36%), Positives = 79/176 (44%), Gaps = 29/176 (16%)
Query: 94 SPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGV-------CRSRPQSRGGGSRKPR 146
+P GR GK+P R G + R G G +SR + R G +KPR
Sbjct: 315 NPRWGRGGKKPRRR----GQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRG-KKPR 369
Query: 147 RQKAAAAQAKSLGGGGKK--------------PRRQKCAAAGQKAAAEESRRGGGKKPRR 192
RQKA+AA AKS GGG KK PR Q QKA A + R GG KKPRR
Sbjct: 370 RQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRR 429
Query: 193 GGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLTPNSLASVS 248
G K A + K+ + G K PRRR QKA + A + G+ AS +
Sbjct: 430 RGPK---AAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAA 482
Score = 78.6 bits (192), Expect = 6e-15
Identities = 88/240 (36%), Positives = 110/240 (45%), Gaps = 54/240 (22%)
Query: 51 RAGRGPCATLSGRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGR-----LGKEPP 105
R GRGP +L G+ P R R Q + +A AA G G+ +G +
Sbjct: 303 RGGRGP-KSLGGQ--NPRWGRGGKKPRRRGQ-KATKAAAAGTKRGGGGQQKAAVVGVKSR 358
Query: 106 SRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRK-------------------PR 146
++ G PRR Q AS AG+ +SRGGG +K PR
Sbjct: 359 KKQRRRGKKPRR---QKASAAGA-------KSRGGGDKKGLREAKRRGDGRKKPRWQNPR 408
Query: 147 RQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKA------VGA 200
R+ A AK GGG KKPRR+ AA K+ +SR GGGKKPRR GQKA GA
Sbjct: 409 RRAQKAPAAKPRGGGSKKPRRRGPKAA--KSRGGKSRSGGGKKPRRRGQKARQKAAEAGA 466
Query: 201 ---GAKKP--QKAAAAGTKTPRRRRQKAAKAAVW--GQKA-AAGESLTPNSLASVSFSRP 252
G KK QKA+AAGTK+ + + +W GQKA AAGE T S +P
Sbjct: 467 ESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQP 526
Score = 74.3 bits (181), Expect = 1e-13
Identities = 82/244 (33%), Positives = 107/244 (43%), Gaps = 23/244 (9%)
Query: 3 GPDQMEIRGGPYLLLG-EVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLS 61
G + +RG + G E H A A N E +A + GRG
Sbjct: 67 GGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRR 126
Query: 62 GRCITPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSR---ESWTGSAPRRC 118
G+ A A R RAQ +A AGS G ++ + +S G P++
Sbjct: 127 GQ---KAAATGSKKPRWRAQ------KSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKA 177
Query: 119 PCQDA-SRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKA 177
A SR+G R +SRG +K R+++A + K+ GG KK RR K AA G K
Sbjct: 178 AAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAK- 236
Query: 178 AAEESRRGGGKKP---RRGGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAA 234
SRRGGGKKP RR GQKA G + K+ G K RR+ Q AA A + AA
Sbjct: 237 ----SRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAA 292
Query: 235 -AGE 237
AGE
Sbjct: 293 TAGE 296
Score = 73.2 bits (178), Expect = 3e-13
Identities = 60/183 (32%), Positives = 83/183 (45%), Gaps = 33/183 (18%)
Query: 83 RPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGS 142
+P + A+ AG+ G K+ G ++ Q+ R ++P RGGGS
Sbjct: 367 KPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKP--RGGGS 424
Query: 143 RKPRRQKAAAAQA---KSLGGGGKKPRR------------------------QKCAAAGQ 175
+KPRR+ AA++ KS GGGKKPRR QK +AAG
Sbjct: 425 KKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGT 484
Query: 176 KAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAA 235
K+ + GK R GQKA AG +KA AAG K+ R++ + K AV G K+
Sbjct: 485 KSRGGGLKSHSGKNLWRRGQKAEAAG----EKATAAGAKSRGRKQPRRQKPAVAGAKSRV 540
Query: 236 GES 238
G S
Sbjct: 541 GGS 543
Score = 71.6 bits (174), Expect = 8e-13
Identities = 69/193 (35%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 53 GRGPCATLSGRCITPA---TALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRES 109
G C +GR A AL L A+ +AA AG LG K+ +++
Sbjct: 5 GHRQCNQAAGRAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKA 64
Query: 110 WTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPR---RQKAAAAQAKSLGGGGKKPR 166
G R Q + AG + ++ G G + R QKAAAA KSLGG G+KPR
Sbjct: 65 AAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPR 124
Query: 167 RQKCAAAGQKAAAEESR--RGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAA 224
R+ GQKAAA S+ R +K G K GAGA+K AAAAG K+ + +K
Sbjct: 125 RR-----GQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQK--AAAAAGVKS--QGGEKPQ 175
Query: 225 KAAVWGQKAAAGE 237
KAA G K+ +G+
Sbjct: 176 KAAAAGAKSRSGK 188
Score = 70.9 bits (172), Expect = 1e-12
Identities = 66/172 (38%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 79 RAQCRPMQATAAEAGSPGLGRLGKEPPS----RESWTGSAPRRCPCQDASRAGSGVCRSR 134
+A+ +ATAA A S G + ++ P+ + GS R+ A+ A S
Sbjct: 505 KAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGN 564
Query: 135 PQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGG 194
QSRGGG KPR+ AA AK+ GGG K+P QK AA K+ + + GGKK R
Sbjct: 565 KQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGD----GGKKAWR-- 618
Query: 195 QKAVGAGA---KKP----QKAAAAGTK---TPRRRRQKAAKAAVWGQKAAAG 236
QKA G GA KKP QK AAA K T R K W + AAAG
Sbjct: 619 QKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAG 670
Score = 68.9 bits (167), Expect = 5e-12
Identities = 51/108 (47%), Positives = 60/108 (55%), Gaps = 24/108 (22%)
Query: 136 QSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGG- 194
+SRGGG K R + AKS G GG K R +G+KAAA +S GGG K RRGG
Sbjct: 722 KSRGGGGAKSR----GSGGAKSRGSGGAKSR------SGKKAAASKSHGGGGAKRRRGGG 771
Query: 195 ------QKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAG 236
+KAV AG QKAAAAG K P R + + + GQKAAAG
Sbjct: 772 AKSRSGEKAVTAGG---QKAAAAGGKKPPRVKSRGGR----GQKAAAG 812
Score = 65.5 bits (158), Expect = 5e-11
Identities = 61/189 (32%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 74 LSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRS 133
+ +R QC A A G+P L + P +A P A+ AG +
Sbjct: 1 MDYRGHRQCN-QAAGRAGPGAPLGAALARTPVEL-----AAESAAPALSAAAAGVKIL-- 52
Query: 134 RPQSRGGGSRKPRRQKAAAAQAKSLGGG------GKKPRRQKCAAAGQKAAAEESRRGGG 187
G G +K RRQKAAA K+ G GK+ R+ AAG A E+R GG
Sbjct: 53 -----GSGDKKLRRQKAAAGGKKARLRGQKGAVAGKEARQHWQKAAG--AGGAENRGGGE 105
Query: 188 KKPRRGGQKAVGAGAKKP----QKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLTPNS 243
+K G K++G +KP QKAAA G+K PR R QK+A A + A A ++
Sbjct: 106 QKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAG 165
Query: 244 LASVSFSRP 252
+ S +P
Sbjct: 166 VKSQGGEKP 174
Score = 60.8 bits (146), Expect = 1e-09
Identities = 60/182 (32%), Positives = 78/182 (42%), Gaps = 22/182 (12%)
Query: 77 RLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQ 136
R RAQ P R K SR + S + P + +A + +
Sbjct: 408 RRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAE 467
Query: 137 SRGGGSRKPRRQKAAAAQAKSLGGGGKKP-------RRQKCAAAGQKAAAEESRRGGGKK 189
SRG +K RQKA+AA KS GGG K R QK AAG+KA A ++ G K+
Sbjct: 468 SRG--DKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQ 525
Query: 190 PRR-----GGQKAVGAGAKKP--QKAAAAGTKT------PRRRRQKAAKAAVWGQKAAAG 236
PRR G K+ G+K QKA AAG + + R K WGQ AAA
Sbjct: 526 PRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAA 585
Query: 237 ES 238
++
Sbjct: 586 KT 587
Score = 55.1 bits (131), Expect = 7e-08
Identities = 57/152 (37%), Positives = 66/152 (43%), Gaps = 33/152 (21%)
Query: 77 RLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQ 136
R RA+ R A G R GK+P +S G + SR G +
Sbjct: 691 RRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAK-------SRGSGGA-----K 738
Query: 137 SRGGGSRKPRRQKAAAAQAKSLGGGGKKPRR----------QKCAAAGQKAAAEESRRGG 186
SRG G K R K AAA +KS GGGG K RR + A GQKAAA G
Sbjct: 739 SRGSGGAKSRSGKKAAA-SKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKAAA-----AG 792
Query: 187 GKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRR 218
GKKP R V + + QKAAA G K RR
Sbjct: 793 GKKPPR-----VKSRGGRGQKAAAGGKKPLRR 819
Score = 51.2 bits (121), Expect = 1e-06
Identities = 64/188 (34%), Positives = 74/188 (39%), Gaps = 84/188 (44%)
Query: 136 QSRGGGSRKPRRQKAAAA----------------QAKSLGG---------------GGKK 164
+SRGGG +K RRQ AA AK GG GGKK
Sbjct: 265 KSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKK 324
Query: 165 PRRQ-----KCAAAG--------QKAA-----AEESRRGGGKKPRRGGQKAVGA------ 200
PRR+ K AAAG QKAA + + +R GKKPRR A GA
Sbjct: 325 PRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGG 384
Query: 201 -------------GAKKP---------QKAAAA-----GTKTPRRRRQKAAKAAVWGQKA 233
G KKP QKA AA G+K PRRR KAAK+ G K+
Sbjct: 385 DKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSR--GGKS 442
Query: 234 AAGESLTP 241
+G P
Sbjct: 443 RSGGGKKP 450
>gi|4885379 histone cluster 1, H1e [Homo sapiens]
Length = 219
Score = 55.5 bits (132), Expect = 6e-08
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 141 GSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGA 200
G KP+ +KA AA+AK G KKP++ AA +K+A K P++ + A A
Sbjct: 114 GEAKPKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAK--------KTPKKAKKPAAAA 165
Query: 201 GAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLTPNS 243
GAKK + A P++ + AKA KAA ++ P +
Sbjct: 166 GAKKAKSPKKAKAAKPKKAPKSPAKAKAVKPKAAKPKTAKPKA 208
Score = 39.3 bits (90), Expect = 0.004
Identities = 33/115 (28%), Positives = 45/115 (39%), Gaps = 19/115 (16%)
Query: 149 KAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKA 208
K Q K G G +K A+ K A+++ KKP AKKP+KA
Sbjct: 90 KGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKP--------AGAAKKPKKA 141
Query: 209 AAAGT------KTPRRRRQKAAKAAVWGQKA-----AAGESLTPNSLASVSFSRP 252
A T KTP++ ++ AA A K+ AA P S A +P
Sbjct: 142 TGAATPKKSAKKTPKKAKKPAAAAGAKKAKSPKKAKAAKPKKAPKSPAKAKAVKP 196
Score = 39.3 bits (90), Expect = 0.004
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 93 GSPGLGRLGKEPPSRESW-----TGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRR 147
G+ G +L K+ S E+ G+A + P A + + P+ + K +
Sbjct: 100 GASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAKKTPKKAK 159
Query: 148 QKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQK 207
+ AAAA AK K P++ K AA K A + + KP+ K A KP+K
Sbjct: 160 KPAAAAGAKK----AKSPKKAK--AAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKPKK 213
Query: 208 AAA 210
AAA
Sbjct: 214 AAA 216
Score = 28.5 bits (62), Expect = 7.4
Identities = 21/104 (20%), Positives = 45/104 (43%)
Query: 80 AQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRG 139
A+ + +A AA+A P + + + + ++ P + A + + +
Sbjct: 116 AKPKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAKKTPKKAKKPAAAAGAKKAKSPKK 175
Query: 140 GGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESR 183
+ KP++ + A+AK++ KP+ K AA K AA + +
Sbjct: 176 AKAAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKPKKAAAKKK 219
>gi|4885381 histone cluster 1, H1b [Homo sapiens]
Length = 226
Score = 47.4 bits (111), Expect = 2e-05
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Query: 141 GSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGA 200
G KP+ +KA AA+AK G P++ K AA +KA + ++ KKP G K V
Sbjct: 117 GEAKPKAKKAGAAKAKKPAGA--TPKKAKKAAGAKKAVKKTPKKA--KKPAAAGVKKV-- 170
Query: 201 GAKKPQKAAAAG-----TKTPRRRR---QKAAKAAVWGQKAA 234
AK P+KA AA TK+P + + KAAK KAA
Sbjct: 171 -AKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAA 211
Score = 37.0 bits (84), Expect = 0.021
Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 11/155 (7%)
Query: 86 QATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKP 145
+AT AG+ R PP E T + R G + + GG
Sbjct: 23 KATKKAAGAGAAKRKATGPPVSELIT-----KAVAASKERNGLSLAALKKALAAGGYDVE 77
Query: 146 RRQKAAAAQAKSLGGGGKKPRRQKCAAAG-----QKAAAEESRRGGGKKPRRGGQKAVGA 200
+ KSL G + + A+G +KAA+ E++ K +K GA
Sbjct: 78 KNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGA 137
Query: 201 GAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAA 235
KK +KAA A K ++ +KA K A G K A
Sbjct: 138 TPKKAKKAAGA-KKAVKKTPKKAKKPAAAGVKKVA 171
Score = 28.1 bits (61), Expect = 9.6
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 80 AQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGS--APRRCPCQDASRAGSGVCRSRPQS 137
A+ + +A AA+A P G P + G+ A ++ P + A +GV +
Sbjct: 119 AKPKAKKAGAAKAKKPA----GATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKV---- 170
Query: 138 RGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQK 196
++ P++ KAAA K+ K P+ K AA KAA ++ + K ++ K
Sbjct: 171 ----AKSPKKAKAAAKPKKATKSPAK-PKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAK 224
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 47.0 bits (110), Expect = 2e-05
Identities = 45/122 (36%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 114 APRRCPCQDASRAGSGVCRSRPQSRG-GGSRKPRRQ---KAAAAQAKSLGGGGKKPRRQK 169
APR CP RA G S P RG GG PR + AAA A+ GGG R +
Sbjct: 143 APRLCP----QRASPGC--SSPGVRGPGGGASPRARGGNAAAALAARQAAGGG---RSRS 193
Query: 170 CAAAGQKAA---AEESRRGGGKKPRRGGQKAVGAGAKK------PQKAAAAGTKTPRRRR 220
AG+ AA A+ RR G RRG ++ +GAG + P +A A G + R RR
Sbjct: 194 AFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRR 253
Query: 221 QK 222
+
Sbjct: 254 PR 255
Score = 32.7 bits (73), Expect = 0.39
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 160 GGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRR 219
GGG PR + AA AA + + G + G+ A A A+ P++ AG + RR
Sbjct: 164 GGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRR 223
Query: 220 RQKAAK 225
R A +
Sbjct: 224 RLGAGE 229
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 47.0 bits (110), Expect = 2e-05
Identities = 45/122 (36%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 114 APRRCPCQDASRAGSGVCRSRPQSRG-GGSRKPRRQ---KAAAAQAKSLGGGGKKPRRQK 169
APR CP RA G S P RG GG PR + AAA A+ GGG R +
Sbjct: 143 APRLCP----QRASPGC--SSPGVRGPGGGASPRARGGNAAAALAARQAAGGG---RSRS 193
Query: 170 CAAAGQKAA---AEESRRGGGKKPRRGGQKAVGAGAKK------PQKAAAAGTKTPRRRR 220
AG+ AA A+ RR G RRG ++ +GAG + P +A A G + R RR
Sbjct: 194 AFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGPPRAPARGARWLRPRR 253
Query: 221 QK 222
+
Sbjct: 254 PR 255
Score = 32.7 bits (73), Expect = 0.39
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 160 GGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRR 219
GGG PR + AA AA + + G + G+ A A A+ P++ AG + RR
Sbjct: 164 GGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRR 223
Query: 220 RQKAAK 225
R A +
Sbjct: 224 RLGAGE 229
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 46.6 bits (109), Expect = 3e-05
Identities = 64/222 (28%), Positives = 86/222 (38%), Gaps = 51/222 (22%)
Query: 24 SALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATALLLLSHRLRAQCR 83
S+ G +PA AA L+ L PR+ G C+ P+ L R CR
Sbjct: 123 SSAGKRPAAAARAAPPRQRSLARCL-PRS--------VGSCVRPSVGPSLPRRHCRRHCR 173
Query: 84 ------------PMQATAAEAGSPGLGR--LGKEPPSRESWTGSAPRRCPCQ-DASRAGS 128
P+Q A P L G PS + PRRC + + S AG
Sbjct: 174 CHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPSLSPF----PRRCRRRAERSPAGH 229
Query: 129 GVCRSRPQSRGG---GSRKPR---------RQKAAAAQAKSLGGGGKKPRRQKCAAAGQK 176
G+ R SRGG G+R+ R R++ A + + G P R AG++
Sbjct: 230 GLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGR-----AGER 284
Query: 177 AAAEESR-RGGGK--KPRRGGQKAVGAGAKKPQKAAAAGTKT 215
AA + R RGGG PR G Q G G + A G+ T
Sbjct: 285 RAARQWRKRGGGPGVSPREGAQ---GEGVRGGVTPRARGSST 323
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 46.2 bits (108), Expect = 3e-05
Identities = 61/236 (25%), Positives = 85/236 (36%), Gaps = 28/236 (11%)
Query: 29 QPAQAANGDAD----ELLELSALLQPRAGRGPC---ATLSGRCITPATALLLLSHRLRAQ 81
+PA A +G A E E +A P AG P A G P + A
Sbjct: 71 EPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAA 130
Query: 82 CRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDAS------RAGSGVCRSRP 135
A + +P E P ++ S + S AG G P
Sbjct: 131 SSTSSPKAEDGATPSPSN---ETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
Query: 136 QSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQ 195
+ GG AAAA+A + G ++ AA G++AAA E GG Q
Sbjct: 188 AAEGGKDEAAGGAAAAAAEAGAASG-------EQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
Query: 196 KAVGAGAKKP----QKAAAAGTKTPRRRRQKA-AKAAVWGQKAAAGESLTPNSLAS 246
+A A K P KAA +K ++ ++A A AA +AAG P A+
Sbjct: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAA 296
Score = 36.2 bits (82), Expect = 0.035
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Query: 108 ESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRR 167
E AP +D + G+ + + G ++AAA + + GG ++ +
Sbjct: 180 EGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKP 239
Query: 168 QKCAAAGQKAAAEESRRGGGKKPRRGGQKA--VGAGAKKPQKAAAAGTKTPRRRRQKAAK 225
Q+ A A +K A + + + + +KA GA A + +AAG P Q+AA
Sbjct: 240 QEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAP--PEQEAAP 297
Query: 226 AAVWGQKAAAGESLTPNSLA 245
A AA+ P+ A
Sbjct: 298 AEEPAAAAASSACAAPSQEA 317
>gi|4885377 histone cluster 1, H1d [Homo sapiens]
Length = 221
Score = 45.8 bits (107), Expect = 4e-05
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 141 GSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGA 200
G KP+ +KA AA+ + G KKP++ AA +K+ K P++ + A A
Sbjct: 115 GEGKPKAKKAGAAKPRKPAGAAKKPKKVAGAATPKKSIK--------KTPKKVKKPATAA 166
Query: 201 GAKKPQKAA-AAGTKTPRRRRQKAAKAAVWGQKAAAGESLTP 241
G KK K+A T P++ + AKA KAA +S P
Sbjct: 167 GTKKVAKSAKKVKTPQPKKAAKSPAKAKAPKPKAAKPKSGKP 208
Score = 44.7 bits (104), Expect = 1e-04
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 14/112 (12%)
Query: 125 RAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGG-------KKPRRQK--CAAAGQ 175
+A SG +P+++ G+ KPR+ AA + K + G K P++ K AAG
Sbjct: 111 KAASG--EGKPKAKKAGAAKPRKPAGAAKKPKKVAGAATPKKSIKKTPKKVKKPATAAGT 168
Query: 176 KAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAA 227
K A+ +++ +P++ + A A KP+ AA K+ + + KA KAA
Sbjct: 169 KKVAKSAKKVKTPQPKKAAKSPAKAKAPKPK---AAKPKSGKPKVTKAKKAA 217
Score = 39.7 bits (91), Expect = 0.003
Identities = 48/175 (27%), Positives = 67/175 (38%), Gaps = 21/175 (12%)
Query: 80 AQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAG-------SGVCR 132
A+ P++ A +AG+ R PP E T + S A +G
Sbjct: 15 AEKTPVKKKAKKAGATAGKRKASGPPVSELITKAVAASKERSGVSLAALKKALAAAGYDV 74
Query: 133 SRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRR 192
+ SR K K Q K G G +K A+ K A ++ G KPR
Sbjct: 75 EKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEGKPKA---KKAGAAKPR- 130
Query: 193 GGQKAVGAGAKKPQKAAAAGT------KTPRRRRQKAAKAAVWGQKAAAGESLTP 241
K GA AKKP+K A A T KTP++ ++ A A +A + TP
Sbjct: 131 ---KPAGA-AKKPKKVAGAATPKKSIKKTPKKVKKPATAAGTKKVAKSAKKVKTP 181
Score = 30.4 bits (67), Expect = 1.9
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 93 GSPGLGRLGKEPPSRESW-----TGSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRR 147
G+ G +L K+ S E G+A R P A + + P+ + K +
Sbjct: 101 GASGSFKLNKKAASGEGKPKAKKAGAAKPRKPAGAAKKPKKVAGAATPKKSIKKTPKKVK 160
Query: 148 QKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQK 207
+ A AA K + KK + + A + A ++ + KP+ G K A P+K
Sbjct: 161 KPATAAGTKKVAKSAKKVKTPQPKKAAKSPAKAKAPKPKAAKPKSGKPKVTKAKKAAPKK 220
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/171 (29%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 22 GHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATALLLLSHRLRAQ 81
G + A A+A G PRA RG R A +HR RAQ
Sbjct: 48 GPGRVRAAQARARRGGGARERPAEGARGPRAARG-----GARAGPDAQLRAARTHRARAQ 102
Query: 82 CRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGG 141
++ AA AGS + + P S P+ A R G P GGG
Sbjct: 103 TPQLRREAACAGSFFFRKCRQSPRSHGQ---PFPQLRSHWQAPRQGW------PAQEGGG 153
Query: 142 SRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRR 192
R RR++AAA L GGGK+ + G+ AA + GG + P R
Sbjct: 154 RRPSRREEAAA-----LAGGGKRTAPGRRGRGGRAAAGQ----GGDRHPDR 195
Score = 35.0 bits (79), Expect = 0.079
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 139 GGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAV 198
G G R P + AAQA++ GGG + R AE +R G + RGG +A
Sbjct: 41 GKGQRPPGPGRVRAAQARARRGGGARER-----------PAEGAR---GPRAARGGARAG 86
Query: 199 GAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQK 232
+ + A +TP+ RR+ A + + +K
Sbjct: 87 PDAQLRAARTHRARAQTPQLRREAACAGSFFFRK 120
>gi|5174449 H1 histone family, member X [Homo sapiens]
Length = 213
Score = 42.7 bits (99), Expect = 4e-04
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 133 SRPQSRGGGSRK--PRRQKAAAAQA----KSLGGGGKKPRRQKCAAAGQKAAAEESRRGG 186
+R + GGG R+ P A A A K+ G R K A GQK ++G
Sbjct: 117 NRKKLEGGGERRGAPAAATAPAPTAHKAKKAAPGAAGSRRADKKPARGQKPEQRSHKKGA 176
Query: 187 GKKPRRGG--QKAVGAGAKKPQKAAAAGT-KTPRRRR 220
G K +GG +K AG KK +KAA K P+ R+
Sbjct: 177 GAKKDKGGKAKKTAAAGGKKVKKAAKPSVPKVPKGRK 213
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 42.0 bits (97), Expect = 6e-04
Identities = 50/171 (29%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 22 GHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATALLLLSHRLRAQ 81
G + A A+A G PRA RG R A +HR RAQ
Sbjct: 48 GPGRVRAAQARARRGGGARERPAEGARGPRAARG-----GARAGPDAQLRAARTHRARAQ 102
Query: 82 CRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQSRGGG 141
++ AA AGS + + P S P+ A R G P GGG
Sbjct: 103 TPQLRREAACAGSFFFRKCRQSPRSHGQ---PFPQLRSHWQAPRQGW------PAQEGGG 153
Query: 142 SRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRR 192
R RR++AAA L GGGK+ G+ AA + GG + P R
Sbjct: 154 RRPSRREEAAA-----LAGGGKRTAPGLRGRGGRAAAGQ----GGDRHPDR 195
Score = 35.0 bits (79), Expect = 0.079
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 139 GGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAV 198
G G R P + AAQA++ GGG + R AE +R G + RGG +A
Sbjct: 41 GKGQRPPGPGRVRAAQARARRGGGARER-----------PAEGAR---GPRAARGGARAG 86
Query: 199 GAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQK 232
+ + A +TP+ RR+ A + + +K
Sbjct: 87 PDAQLRAARTHRARAQTPQLRREAACAGSFFFRK 120
>gi|116006967 neuregulin 1 isoform GGF2 [Homo sapiens]
Length = 422
Score = 41.6 bits (96), Expect = 8e-04
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 114 APRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAA 173
AP +A+ AG+ VC S P S G S + Q+AA G P+R++ A
Sbjct: 45 APGAAAGNEAAPAGASVCYSSPPSVG--SVQELAQRAAVVIE-----GKVHPQRRQQGAL 97
Query: 174 GQKAAA---EESRRGGGKKPRRGGQKAVGAGAKKPQKAA 209
+KAAA E GG ++P G +A+G A++P AA
Sbjct: 98 DRKAAAAAGEAGAWGGDREPPAAGPRALGPPAEEPLLAA 136
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 41.6 bits (96), Expect = 8e-04
Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Query: 113 SAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAA 172
SAPR P + A + SRP + G G R P + + S G R
Sbjct: 73 SAPRAGPTRSAGTSSRNPA-SRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ 131
Query: 173 AGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTP-RRRRQKAAKAAV 228
G + +AEE+ GK + A+ AGA++ GT +P RR +AA V
Sbjct: 132 KGLRISAEET-VARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEV 187
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 41.6 bits (96), Expect = 8e-04
Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Query: 113 SAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAA 172
SAPR P + A + SRP + G G R P + + S G R
Sbjct: 73 SAPRAGPTRSAGTSSRNPA-SRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ 131
Query: 173 AGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTP-RRRRQKAAKAAV 228
G + +AEE+ GK + A+ AGA++ GT +P RR +AA V
Sbjct: 132 KGLRISAEET-VARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEV 187
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 41.2 bits (95), Expect = 0.001
Identities = 62/211 (29%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 28 AQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATALLL-----LSHRLRAQC 82
A+PA+A E +A + R G A P LLL L+ L
Sbjct: 219 AKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSP 278
Query: 83 RPMQATAAEAGSPGLGR--LGKEPPSRESWTGSAPRRCPCQ-DASRAGSGVCRSRPQSRG 139
P+Q A P L G PS + PRRC + + S AG G+ R SRG
Sbjct: 279 PPLQPRLGSASPPRLAAPLAGSRAPSLSPF----PRRCRRRAERSPAGHGLPLPRSLSRG 334
Query: 140 G---GSRKPR---------RQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESR-RGG 186
G G+R+ R R++ A + + G P R AG++ AA + R RGG
Sbjct: 335 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGR-----AGERRAARQWRKRGG 389
Query: 187 GK--KPRRGGQKAVGAGAKKPQKAAAAGTKT 215
G PR G Q G G + A G+ T
Sbjct: 390 GPGVSPREGAQ---GEGVRGGVTPRARGSST 417
Score = 33.1 bits (74), Expect = 0.30
Identities = 37/161 (22%), Positives = 62/161 (38%), Gaps = 23/161 (14%)
Query: 96 GLGRLGKEPPSRESWT----------GSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKP 145
G GR+ + P +++W GS P +RA R+R ++ G
Sbjct: 184 GSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGS---- 239
Query: 146 RRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKP 205
R + A + + G + P + A+ AA +R +PR G A
Sbjct: 240 -RGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLA 298
Query: 206 QKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESL-TPNSLA 245
A + + PRR R++A +++ AG L P SL+
Sbjct: 299 GSRAPSLSPFPRRCRRRA-------ERSPAGHGLPLPRSLS 332
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 41.2 bits (95), Expect = 0.001
Identities = 62/211 (29%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 28 AQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATALLL-----LSHRLRAQC 82
A+PA+A E +A + R G A P LLL L+ L
Sbjct: 219 AKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSP 278
Query: 83 RPMQATAAEAGSPGLGR--LGKEPPSRESWTGSAPRRCPCQ-DASRAGSGVCRSRPQSRG 139
P+Q A P L G PS + PRRC + + S AG G+ R SRG
Sbjct: 279 PPLQPRLGSASPPRLAAPLAGSRAPSLSPF----PRRCRRRAERSPAGHGLPLPRSLSRG 334
Query: 140 G---GSRKPR---------RQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESR-RGG 186
G G+R+ R R++ A + + G P R AG++ AA + R RGG
Sbjct: 335 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGR-----AGERRAARQWRKRGG 389
Query: 187 GK--KPRRGGQKAVGAGAKKPQKAAAAGTKT 215
G PR G Q G G + A G+ T
Sbjct: 390 GPGVSPREGAQ---GEGVRGGVTPRARGSST 417
Score = 33.1 bits (74), Expect = 0.30
Identities = 37/161 (22%), Positives = 62/161 (38%), Gaps = 23/161 (14%)
Query: 96 GLGRLGKEPPSRESWT----------GSAPRRCPCQDASRAGSGVCRSRPQSRGGGSRKP 145
G GR+ + P +++W GS P +RA R+R ++ G
Sbjct: 184 GSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGS---- 239
Query: 146 RRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAGAKKP 205
R + A + + G + P + A+ AA +R +PR G A
Sbjct: 240 -RGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLA 298
Query: 206 QKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESL-TPNSLA 245
A + + PRR R++A +++ AG L P SL+
Sbjct: 299 GSRAPSLSPFPRRCRRRA-------ERSPAGHGLPLPRSLS 332
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 40.8 bits (94), Expect = 0.001
Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 8/167 (4%)
Query: 75 SHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSR 134
SH C + A A PG + PP R P R P A AG G
Sbjct: 237 SHNFAKGCAEFYGSGARA-QPGGPCWAQGPPGRLPDPIPLPTRAPRTSAGLAGVGSGAPG 295
Query: 135 PQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPR--- 191
+ G +R PR ++ ++ G + R A G AA + RG PR
Sbjct: 296 EPAEPGRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGPCPAAAQGARGSWPSPRCLP 355
Query: 192 --RGGQKAVGAGAKKPQKAAAAGTKTPRR--RRQKAAKAAVWGQKAA 234
G ++A A P++ A + R RR + ++ GQ A
Sbjct: 356 SDGGAREAPPTSAPHPRRPAGSPPALADREGRRSLVPQTSIQGQNFA 402
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 40.8 bits (94), Expect = 0.001
Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 10/147 (6%)
Query: 66 TPATALLLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASR 125
TPAT S+RL Q A R+ + P R +GS PRR
Sbjct: 40 TPATGTRS-SYRLLPQKGRGNLRGAPTAPVSFSRIRRNP-LRTQLSGSPPRRPTSVLRLA 97
Query: 126 AGSGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRG 185
+ +G RP+ R GG R R ++ GG+K R ++ A + + RRG
Sbjct: 98 SPAGDLPRRPRPRAGGGRHSPRPAVG-----TIFRGGRKGRLREGRGAVRGSG---KRRG 149
Query: 186 GGKKPRRGGQKAVGAGAKKPQKAAAAG 212
G +P+R + G GA + AA G
Sbjct: 150 WGLRPQRVRSRLAGLGAPRGGAAAPRG 176
>gi|239508698 PREDICTED: similar to mucin [Homo sapiens]
Length = 265
Score = 40.8 bits (94), Expect = 0.001
Identities = 44/161 (27%), Positives = 62/161 (38%), Gaps = 22/161 (13%)
Query: 81 QCRPMQATAAEAGS---PGLGRLGKEPPSRESWTGSAP--------RRCPCQDASRAGSG 129
QCRP T GS P + G + E+ AP +R P Q R +G
Sbjct: 111 QCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAG 170
Query: 130 V-----CRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRR 184
RS P + G++ + AAA S G +K +RQ+ + AA RR
Sbjct: 171 TGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGHRTEKRKRQQPQC--RPAAGTGQRR 228
Query: 185 GGGKKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRRRQKAAK 225
G P Q+A + ++AAAA T R + K
Sbjct: 229 GSRSSPSADQQRA----QDREEEAAAAPAPTSSGHRTEKRK 265
Score = 38.5 bits (88), Expect = 0.007
Identities = 46/174 (26%), Positives = 65/174 (37%), Gaps = 37/174 (21%)
Query: 81 QCRPMQATAAEAGS---PGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCRSRPQS 137
QC+P T GS P + G + E+ P D RA
Sbjct: 40 QCQPAGGTGQRRGSGSSPSADQQGAQDREEEA------AAAPAADQQRA----------- 82
Query: 138 RGGGSRKPRRQKAAAAQAKSLGGGG---KKPRRQKCAAAGQKAAAEESRRGGGKKPRRGG 194
+ R ++AAAA A + G +KP++ +C AG RRG G P
Sbjct: 83 ------QDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTG----QRRGSGSSPSADQ 132
Query: 195 QKAVGAGAKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLTPNSLASVS 248
Q A + ++AAAA T R R + K ++ AAG S +S S
Sbjct: 133 QGA----QDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAAGTGQRRGSRSSPS 182
Score = 34.3 bits (77), Expect = 0.13
Identities = 39/153 (25%), Positives = 53/153 (34%), Gaps = 13/153 (8%)
Query: 79 RAQCRPMQATAAEAGSPGLGRLGKEPPSRESW-----------TGSAPRRCPCQDASRAG 127
RAQ R +A AA A + R K P + +GS+P R
Sbjct: 81 RAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREE 140
Query: 128 SGVCRSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGG 187
P SRG + K + Q+ A G G ++ R +A Q A E
Sbjct: 141 EAAAAPAPTSRGHRTEKRKPQQPQRRPAA--GTGQRRGSRSSPSADQQGAQDREEEAAAA 198
Query: 188 KKPRRGGQKAVGAGAKKPQKAAAAGTKTPRRRR 220
P G + ++PQ AAGT R R
Sbjct: 199 PVPTSRGHRTEKRKRQQPQCRPAAGTGQRRGSR 231
Score = 28.1 bits (61), Expect = 9.6
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Query: 132 RSRPQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAE-ESRRGGGKKP 190
+ +PQ + G RR ++ A G ++ AA Q+ A + E P
Sbjct: 36 QQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPAP 95
Query: 191 RRGGQKAVGAGAKKPQKAAAAGT 213
G + ++PQ A GT
Sbjct: 96 TSSGHRTEKRKPQQPQCRPAGGT 118
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 40.8 bits (94), Expect = 0.001
Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 16/128 (12%)
Query: 79 RAQCRPMQATAAEAGS-PGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSG---VCRSR 134
R CR + G+ PG G PP G + RCP + +R G G V +R
Sbjct: 106 RRYCRHQGRQGSGLGAGPGAGTWAPAPP------GVSKPRCPGR--ARPGEGQQQVTTAR 157
Query: 135 PQSRGGGSRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGG 194
P + G+R+PR AAA + G G R + AA+ A E G + P RG
Sbjct: 158 PPAINRGARQPRAGAAAAGR----GPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPSRGW 213
Query: 195 QKAVGAGA 202
+GA
Sbjct: 214 GAGGRSGA 221
>gi|149274655 synapse defective 1, Rho GTPase, homolog 2 [Homo
sapiens]
Length = 1194
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 15/135 (11%)
Query: 90 AEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVCR---SRPQS-----RGGG 141
A+ P R +PPSR G+A RR +D R G G R S P+S RGG
Sbjct: 18 ADHSFPAGARAPGQPPSR----GAAYRRACPRDGERGGGGRPRQQVSPPRSPQREPRGGQ 73
Query: 142 SRKPRRQKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKPRRGGQKAVGAG 201
R PR + + + +SL G K P Q+ + + R + P RGG + G
Sbjct: 74 LRTPRMRPSCSRSLESLRVGAKPPPFQRWPSDSWIRCG--AHRDWDEPPPRGG-RMDGWS 130
Query: 202 AKKPQKAAAAGTKTP 216
+ + AA G + P
Sbjct: 131 GDRARAAAPTGLQPP 145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,235,865
Number of Sequences: 37866
Number of extensions: 698754
Number of successful extensions: 6052
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 541
Number of HSP's that attempted gapping in prelim test: 4483
Number of HSP's gapped (non-prelim): 1467
length of query: 294
length of database: 18,247,518
effective HSP length: 101
effective length of query: 193
effective length of database: 14,423,052
effective search space: 2783649036
effective search space used: 2783649036
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.