Search of human proteins with 239754489

Search of human proteins with 239754489

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
         (228 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]           473   e-134
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ...   468   e-132
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]           468   e-132
gi|239749044 PREDICTED: hypothetical protein XP_002346891 [Homo ...   177   9e-45
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    54   8e-08
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              54   1e-07
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             53   2e-07
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]            50   1e-06
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]            48   6e-06
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho...    48   8e-06
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho...    48   8e-06
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho...    48   8e-06
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    48   8e-06
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]            47   1e-05
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ...    47   1e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      46   3e-05
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]            46   3e-05
gi|239754474 PREDICTED: similar to mucin [Homo sapiens]                46   3e-05
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]            46   3e-05
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]             46   3e-05
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          45   5e-05
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       45   5e-05
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]           45   5e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      45   7e-05
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            45   7e-05
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            45   7e-05
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo...    45   7e-05
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo...    45   7e-05
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]            44   9e-05
gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens]           44   9e-05

>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 228

 Score =  473 bits (1218), Expect = e-134
 Identities = 228/228 (100%), Positives = 228/228 (100%)

Query: 1   MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP 60
           MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP
Sbjct: 1   MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP 60

Query: 61  ATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAA 120
           ATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAA
Sbjct: 61  ATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAA 120

Query: 121 PSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVAR 180
           PSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVAR
Sbjct: 121 PSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVAR 180

Query: 181 ASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           ASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP
Sbjct: 181 ASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228


>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
           sapiens]
          Length = 231

 Score =  468 bits (1204), Expect = e-132
 Identities = 228/231 (98%), Positives = 228/231 (98%), Gaps = 3/231 (1%)

Query: 1   MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP 60
           MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP
Sbjct: 1   MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP 60

Query: 61  ATAESPDTPEEPPEEPAPAIAPGG---GGGGCGAQHWAAGRRAQREQGAGAAVLADFGHV 117
           ATAESPDTPEEPPEEPAPAIAPGG   GGGGCGAQHWAAGRRAQREQGAGAAVLADFGHV
Sbjct: 61  ATAESPDTPEEPPEEPAPAIAPGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHV 120

Query: 118 RAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAH 177
           RAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAH
Sbjct: 121 RAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAH 180

Query: 178 VARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           VARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP
Sbjct: 181 VARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 231


>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score =  468 bits (1204), Expect = e-132
 Identities = 228/231 (98%), Positives = 228/231 (98%), Gaps = 3/231 (1%)

Query: 1   MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP 60
           MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP
Sbjct: 1   MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP 60

Query: 61  ATAESPDTPEEPPEEPAPAIAPGG---GGGGCGAQHWAAGRRAQREQGAGAAVLADFGHV 117
           ATAESPDTPEEPPEEPAPAIAPGG   GGGGCGAQHWAAGRRAQREQGAGAAVLADFGHV
Sbjct: 61  ATAESPDTPEEPPEEPAPAIAPGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHV 120

Query: 118 RAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAH 177
           RAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAH
Sbjct: 121 RAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAH 180

Query: 178 VARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           VARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP
Sbjct: 181 VARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 231


>gi|239749044 PREDICTED: hypothetical protein XP_002346891 [Homo
          sapiens]
          Length = 114

 Score =  177 bits (448), Expect = 9e-45
 Identities = 85/86 (98%), Positives = 85/86 (98%)

Query: 1  MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP 60
          MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP
Sbjct: 1  MKLDRPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAP 60

Query: 61 ATAESPDTPEEPPEEPAPAIAPGGGG 86
          ATAESPDTPEEPPEEPAPAIAPGG G
Sbjct: 61 ATAESPDTPEEPPEEPAPAIAPGGSG 86


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 68/217 (31%), Positives = 78/217 (35%), Gaps = 29/217 (13%)

Query: 13  PCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATA--ESPDTPE 70
           P    RP+V  G     +  RP    SAG   C    AAAA  AG  PA A    P  P 
Sbjct: 107 PPSPRRPLVPAGPAPPAAKLRPPPEGSAGS--CAPVPAAAAVAAGPEPAPAGPAKPAGPA 164

Query: 71  EPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAP-----SGLR 125
                  P   PG G G        AG  A +     AA+L    H  AAP     +   
Sbjct: 165 ALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLN--SHHAAAPAVSLVNNGP 222

Query: 126 RRRLQRRRGGRGGR------GAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVA 179
              L   +    G         G A  P P  A +  + PA  AP  A PP PP+ A +A
Sbjct: 223 AALLPLPKPAAPGTVIQTPPFVGAAAPPAP-AAPSPPAAPAPAAPAAAPPPPPPAPATLA 281

Query: 180 RASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGG 216
           R          PG PAGP    A     PP  A  GG
Sbjct: 282 RP---------PGHPAGP--PTAAPAVPPPAAAQNGG 307



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 54/192 (28%), Positives = 68/192 (35%), Gaps = 28/192 (14%)

Query: 28  RNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGG 87
           R    R ++  + G  +     A AA    AAPA   +P    EPP  PA    PGGGG 
Sbjct: 46  RTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEG-APGAAPEPP--PAGRARPGGGGP 102

Query: 88  -------------GCGAQHWAAGRRAQREQGAGA-----AVLADFGHVRAAPSGLRR--- 126
                          G    AA  R   E  AG+     A  A       AP+G  +   
Sbjct: 103 QRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAG 162

Query: 127 -RRLQRRRGGRGGRGAGRARKPGPDR---AGAERSLPAHRAPRLARPPVPPSVAHVARAS 182
              L  R G   G G G    PGP +    GA ++L    A   +     P+V+ V    
Sbjct: 163 PAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGP 222

Query: 183 AGLGARPVPGGP 194
           A L   P P  P
Sbjct: 223 AALLPLPKPAAP 234



 Score = 35.4 bits (80), Expect = 0.041
 Identities = 44/167 (26%), Positives = 53/167 (31%), Gaps = 13/167 (7%)

Query: 50  AAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAA 109
           A AA    AAPA A     P  PP  PA    P G   G      A    A  + G  A 
Sbjct: 251 APAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAG 310

Query: 110 VLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPA--HRAPRLA 167
                      P+G+         G  G   A  A  PG      +R + A    A  LA
Sbjct: 311 AAPAPAPAAGGPAGV--------SGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLA 362

Query: 168 RPPVPPSVAHVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAG 214
                 + A +       GA P P     P        +  P+GAAG
Sbjct: 363 ASGPASTAASMVIGPTMQGALPSPAAVPPPAPG---TPTGLPKGAAG 406



 Score = 35.4 bits (80), Expect = 0.041
 Identities = 40/161 (24%), Positives = 57/161 (35%), Gaps = 23/161 (14%)

Query: 34  PSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQH 93
           P+   +A P +    AA     AGAAPA A +   P     +P P  A      G  A+ 
Sbjct: 287 PAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAE- 345

Query: 94  WAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRR-------------------RG 134
             + +R  +     A  LA  G    A S +    +Q                     +G
Sbjct: 346 --SPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKG 403

Query: 135 GRGGRGAGRARKPGPDRAGAERSL-PAHRAPRLARPPVPPS 174
             G      +R P    +G   +L P   APRL +PP  P+
Sbjct: 404 AAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPT 444



 Score = 34.7 bits (78), Expect = 0.069
 Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 16/76 (21%)

Query: 152 AGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARP---------VPGGPAGPRESWA 202
           AGA  + PA  AP  A  P P   A  AR   G   RP         VP GPA P    A
Sbjct: 71  AGAGPAAPAEGAPGAAPEPPP---AGRARPGGGGPQRPGPPSPRRPLVPAGPAPP----A 123

Query: 203 RRTSSPPRGAAGGGRP 218
            +   PP G+AG   P
Sbjct: 124 AKLRPPPEGSAGSCAP 139


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 59/216 (27%), Positives = 85/216 (39%), Gaps = 38/216 (17%)

Query: 34   PSSRASAGPGLCRTEAAAA----ATRAGAAPATAESPDTPEEPPE---EPAPAIAPGGGG 86
            P   A+  P L    +  A     T + ++  T+E     E PP     P     PGGGG
Sbjct: 1299 PRRAAAKSPDLSNQNSDQANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGG 1358

Query: 87   GGC--GAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGR-------- 136
            GG   G    + G  +QR +       +      +   G+ R+  +   GG+        
Sbjct: 1359 GGAVPGISAMSRGDLSQRAKDLSKRSFS------SQRPGMERQNRRPGPGGKAGSSGSSS 1412

Query: 137  GGRGAGRARKPGPDRAGAERSLPA---------HRAPRLARPPVPPSVAHVARASAGLGA 187
            GG G G   + GP R G +RS P+          R P L  PP PPS + V R       
Sbjct: 1413 GGGGGGPGGRTGPGR-GDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLD----- 1466

Query: 188  RPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPG 223
            + +   PAG +++ A+ +S      A GG P   PG
Sbjct: 1467 QVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPG 1502



 Score = 32.0 bits (71), Expect = 0.45
 Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 25/183 (13%)

Query: 30  SNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEE----PPEE-------PAP 78
           + S P+   +A P L     + ++T +G+  A+   P  P +    PPEE       P P
Sbjct: 555 AQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVP 614

Query: 79  AIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGG 138
            + P G G G   Q  + G    + Q +    L      +     L++++  + +  + G
Sbjct: 615 KVEPKGDGIGPTRQPPSQGLGYPKYQKS----LPPRFQRQQQEQLLKQQQQHQWQQHQQG 670

Query: 139 RGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPR 198
                   P P +     ++PA +A     PP PP   +      G   RP P  P    
Sbjct: 671 SAPPTPVPPSPPQPVTLGAVPAPQA-----PPPPPKALY-----PGALGRPPPMPPMNFD 720

Query: 199 ESW 201
             W
Sbjct: 721 PRW 723


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 63/211 (29%), Positives = 77/211 (36%), Gaps = 34/211 (16%)

Query: 24  GWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAP- 82
           G R  +++S P   +S  P + R +AAAAA            P  P    E P+P  AP 
Sbjct: 325 GGRPGSAHSPPDKPSSPSPRV-RDKAAAAA------------PTPPARGKESPSPRSAPS 371

Query: 83  --GGGG---GGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRG 137
             G GG   GG G +     RR +    A A         R AP     R L R R    
Sbjct: 372 SQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSD 431

Query: 138 GRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAG- 196
                 A  PGP+  G+ER    H      RPP     A  A  S   GA    GGP G 
Sbjct: 432 SGSGRGAPGPGPE-PGSERGHGGHGKRAKERPP----RARPASTSPSPGAHGRRGGPEGK 486

Query: 197 ---------PRESWARRTSSPPRGAAGGGRP 218
                    PR   + R+ S  R  +   RP
Sbjct: 487 SSSRSPGPHPRSWSSSRSPSKSRSRSAEKRP 517



 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 58/209 (27%), Positives = 76/209 (36%), Gaps = 33/209 (15%)

Query: 28  RNSNSR-PSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGG 86
           R+S SR PS    +G G  +    +   R+GA      S  +P + P  P+P +      
Sbjct: 293 RSSGSRSPSPSGGSGWGSPQRNGGSGQ-RSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAA 351

Query: 87  GG----CGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAG 142
                    +   + R A   QG G           A  +G RRRR +RRR  R    A 
Sbjct: 352 AAPTPPARGKESPSPRSAPSSQGRGGRA--------AGGAGRRRRRRRRRRRSRSSASAP 403

Query: 143 RAR-----KPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGP 197
           R R     +P P R G+ RSL   R+          S +   R + G G  P PG   G 
Sbjct: 404 RRRGRRRPRPAPPR-GSSRSLSRARS---------SSDSGSGRGAPGPG--PEPGSERGH 451

Query: 198 RESWARRTSSPPRGAAGGGRPFLHPGGRG 226
                R    PPR       P   PG  G
Sbjct: 452 GGHGKRAKERPPRARPASTSP--SPGAHG 478



 Score = 30.8 bits (68), Expect = 1.00
 Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 13/116 (11%)

Query: 102 REQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAH 161
           R++G         G    +PSG       +R GG G R      +PG   +  ++  P+ 
Sbjct: 283 RDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDK--PSS 340

Query: 162 RAPRL-----ARPPVPPS------VAHVARASAGLGARPVPGGPAGPRESWARRTS 206
            +PR+     A  P PP+          A +S G G R   G     R    RR S
Sbjct: 341 PSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRS 396


>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 268

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 48/179 (26%), Positives = 63/179 (35%), Gaps = 36/179 (20%)

Query: 45  CRTEAAAAATRA---GAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQ 101
           CR   A  A R      +P  +      E  P   AP  AP         +     RR  
Sbjct: 50  CRRSLACPAVRGCKREGSPGVSAQGGPLEGTPRPAAPGAAPR-------PRRQRLRRRRA 102

Query: 102 REQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPA- 160
           +  G G A               R R L RR  G GGR  G   +P P   GA  + PA 
Sbjct: 103 KVGGWGCA---------------RARGLDRRAPGEGGRSPGGGLEPSPGARGAVGAAPAA 147

Query: 161 ----------HRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRESWARRTSSPP 209
                      RAP++    +PP +  ++RA    G R +PG    P  S  +  + PP
Sbjct: 148 ARHRKPRGRSRRAPQMPLRVLPPILPGLSRAGGATGGRGLPGRRGLPGRSGLQGAAVPP 206


>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 56/176 (31%), Positives = 66/176 (37%), Gaps = 37/176 (21%)

Query: 69  PEEPPEEPAPA----IAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPS-- 122
           P +  E P P      A GGGGGG G    + GR AQR  GAGA        + AAPS  
Sbjct: 19  PGDGDEAPGPGGGEGAAAGGGGGGLG----SGGRSAQRRAGAGAR-----RPIGAAPSVG 69

Query: 123 ------GLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAE---RSLPAHRAPRLARPPVPP 173
                 G  R+   R  G  G  G  + R+  P R  +    RS  A  A R  R   P 
Sbjct: 70  PGGELQGWGRKSGCRPPGPEGWAGGRKLRRWLPPRRFSNFCCRSPCAQTAVRRRRRRAPS 129

Query: 174 SVAHVARASAGLG-------------ARPVPGGPAGPRESWARRTSSPPRGAAGGG 216
                 R  AG G             A P+     G R  +  R+  PPR   GGG
Sbjct: 130 PRGAGWREGAGAGRGTPATMAGGEWAAEPLHLPQRGRRRRFTCRSGRPPRRGRGGG 185


>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
            sapiens]
          Length = 1751

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 59/220 (26%), Positives = 71/220 (32%), Gaps = 46/220 (20%)

Query: 36   SRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGG-GGCGAQHW 94
            S+ + GP   R E+  A      AP  A  P  P  PP  P P +  G     G G   W
Sbjct: 984  SKGAPGPAGARGESGLAG-----APGPA-GPPGPPGPPGPPGPGLPAGFDDMEGSGGPFW 1037

Query: 95   AAGRRAQREQGA----------------GAAVLADFGHVRAAPSGLRRRRLQRRRGGRGG 138
            +  R A   QG                 GA        V   P    R  +   +G +G 
Sbjct: 1038 STARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGD 1097

Query: 139  RGA-GRARKPGPDRAGAERSLPAHRAPRLARPPVPPS-VAHVARASA------------G 184
            RG+ G    PG D  G          P L  PP PP  V +V+                G
Sbjct: 1098 RGSRGEKGDPGKDGVGQ---------PGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPG 1148

Query: 185  LGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGG 224
                P P GP G   S   R S  P+G  G       P G
Sbjct: 1149 FAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDG 1188



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 35/97 (36%), Positives = 38/97 (39%), Gaps = 19/97 (19%)

Query: 134  GGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGG 193
            G +G +GA     PGP  A  E  L    AP  A PP PP          G    P PG 
Sbjct: 980  GHKGSKGA-----PGPAGARGESGLAG--APGPAGPPGPP----------GPPGPPGPGL 1022

Query: 194  PAG--PRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
            PAG    E       S  R A G   P   PG +GDP
Sbjct: 1023 PAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDP 1059



 Score = 32.3 bits (72), Expect = 0.34
 Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 131 RRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPP-VPPSVAHVARASAGLGARP 189
           R  GGR   G  + +K  P   G         +P L  PP +P  V+ +  A   L   P
Sbjct: 742 RTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVP 801

Query: 190 VPGGPAGP--RESWARRTSSP----PRGAAGGGRPFLHPGGRGD 227
            P GP GP  R+    R   P      G  G   P   PG  GD
Sbjct: 802 GPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGD 845



 Score = 30.8 bits (68), Expect = 1.00
 Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 22/91 (24%)

Query: 145  RKPGPDRAGAERSL-----PAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRE 199
            R+  P R G + SL     P H+  + A  P        AR  +GL   P P GP GP  
Sbjct: 960  REGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAG------ARGESGLAGAPGPAGPPGP-- 1011

Query: 200  SWARRTSSPPRGAAGGGRP--FLHPGGRGDP 228
                     P G  G G P  F    G G P
Sbjct: 1012 -------PGPPGPPGPGLPAGFDDMEGSGGP 1035



 Score = 28.9 bits (63), Expect = 3.8
 Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 96   AGRRAQREQGAGAAVLADFGHVRAAPSGLRRRR-LQRRRGGRGGRGAGRARKPGPDRAGA 154
            AG++ +R +  G      FG     P G    R      G +G    G+   PGP     
Sbjct: 1333 AGQKGERGEPGGGGF---FGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPG 1389

Query: 155  ERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGP 197
                     P    PP PPS     R +  +   P P GP GP
Sbjct: 1390 IGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGP 1432


>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
           sapiens]
          Length = 1336

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 59/220 (26%), Positives = 71/220 (32%), Gaps = 46/220 (20%)

Query: 36  SRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGG-GGCGAQHW 94
           S+ + GP   R E+  A      AP  A  P  P  PP  P P +  G     G G   W
Sbjct: 569 SKGAPGPAGARGESGLAG-----APGPA-GPPGPPGPPGPPGPGLPAGFDDMEGSGGPFW 622

Query: 95  AAGRRAQREQGA----------------GAAVLADFGHVRAAPSGLRRRRLQRRRGGRGG 138
           +  R A   QG                 GA        V   P    R  +   +G +G 
Sbjct: 623 STARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGD 682

Query: 139 RGA-GRARKPGPDRAGAERSLPAHRAPRLARPPVPPS-VAHVARASA------------G 184
           RG+ G    PG D  G          P L  PP PP  V +V+                G
Sbjct: 683 RGSRGEKGDPGKDGVGQ---------PGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPG 733

Query: 185 LGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGG 224
               P P GP G   S   R S  P+G  G       P G
Sbjct: 734 FAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDG 773



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 35/97 (36%), Positives = 38/97 (39%), Gaps = 19/97 (19%)

Query: 134 GGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGG 193
           G +G +GA     PGP  A  E  L    AP  A PP PP          G    P PG 
Sbjct: 565 GHKGSKGA-----PGPAGARGESGLAG--APGPAGPPGPP----------GPPGPPGPGL 607

Query: 194 PAG--PRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           PAG    E       S  R A G   P   PG +GDP
Sbjct: 608 PAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDP 644



 Score = 32.3 bits (72), Expect = 0.34
 Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 131 RRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPP-VPPSVAHVARASAGLGARP 189
           R  GGR   G  + +K  P   G         +P L  PP +P  V+ +  A   L   P
Sbjct: 327 RTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVP 386

Query: 190 VPGGPAGP--RESWARRTSSP----PRGAAGGGRPFLHPGGRGD 227
            P GP GP  R+    R   P      G  G   P   PG  GD
Sbjct: 387 GPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGD 430



 Score = 30.8 bits (68), Expect = 1.00
 Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 22/91 (24%)

Query: 145 RKPGPDRAGAERSL-----PAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRE 199
           R+  P R G + SL     P H+  + A  P        AR  +GL   P P GP GP  
Sbjct: 545 REGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAG------ARGESGLAGAPGPAGPPGP-- 596

Query: 200 SWARRTSSPPRGAAGGGRP--FLHPGGRGDP 228
                    P G  G G P  F    G G P
Sbjct: 597 -------PGPPGPPGPGLPAGFDDMEGSGGP 620



 Score = 28.9 bits (63), Expect = 3.8
 Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 96   AGRRAQREQGAGAAVLADFGHVRAAPSGLRRRR-LQRRRGGRGGRGAGRARKPGPDRAGA 154
            AG++ +R +  G      FG     P G    R      G +G    G+   PGP     
Sbjct: 918  AGQKGERGEPGGGGF---FGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPG 974

Query: 155  ERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGP 197
                     P    PP PPS     R +  +   P P GP GP
Sbjct: 975  IGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGP 1017


>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
           sapiens]
          Length = 1516

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 59/220 (26%), Positives = 71/220 (32%), Gaps = 46/220 (20%)

Query: 36  SRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGG-GGCGAQHW 94
           S+ + GP   R E+  A      AP  A  P  P  PP  P P +  G     G G   W
Sbjct: 749 SKGAPGPAGARGESGLAG-----APGPA-GPPGPPGPPGPPGPGLPAGFDDMEGSGGPFW 802

Query: 95  AAGRRAQREQGA----------------GAAVLADFGHVRAAPSGLRRRRLQRRRGGRGG 138
           +  R A   QG                 GA        V   P    R  +   +G +G 
Sbjct: 803 STARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGD 862

Query: 139 RGA-GRARKPGPDRAGAERSLPAHRAPRLARPPVPPS-VAHVARASA------------G 184
           RG+ G    PG D  G          P L  PP PP  V +V+                G
Sbjct: 863 RGSRGEKGDPGKDGVGQ---------PGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPG 913

Query: 185 LGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGG 224
               P P GP G   S   R S  P+G  G       P G
Sbjct: 914 FAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDG 953



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 35/97 (36%), Positives = 38/97 (39%), Gaps = 19/97 (19%)

Query: 134 GGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGG 193
           G +G +GA     PGP  A  E  L    AP  A PP PP          G    P PG 
Sbjct: 745 GHKGSKGA-----PGPAGARGESGLAG--APGPAGPPGPP----------GPPGPPGPGL 787

Query: 194 PAG--PRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           PAG    E       S  R A G   P   PG +GDP
Sbjct: 788 PAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDP 824



 Score = 32.3 bits (72), Expect = 0.34
 Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 131 RRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPP-VPPSVAHVARASAGLGARP 189
           R  GGR   G  + +K  P   G         +P L  PP +P  V+ +  A   L   P
Sbjct: 507 RTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVP 566

Query: 190 VPGGPAGP--RESWARRTSSP----PRGAAGGGRPFLHPGGRGD 227
            P GP GP  R+    R   P      G  G   P   PG  GD
Sbjct: 567 GPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGD 610



 Score = 30.8 bits (68), Expect = 1.00
 Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 22/91 (24%)

Query: 145 RKPGPDRAGAERSL-----PAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRE 199
           R+  P R G + SL     P H+  + A  P        AR  +GL   P P GP GP  
Sbjct: 725 REGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAG------ARGESGLAGAPGPAGPPGP-- 776

Query: 200 SWARRTSSPPRGAAGGGRP--FLHPGGRGDP 228
                    P G  G G P  F    G G P
Sbjct: 777 -------PGPPGPPGPGLPAGFDDMEGSGGP 800



 Score = 28.9 bits (63), Expect = 3.8
 Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 96   AGRRAQREQGAGAAVLADFGHVRAAPSGLRRRR-LQRRRGGRGGRGAGRARKPGPDRAGA 154
            AG++ +R +  G      FG     P G    R      G +G    G+   PGP     
Sbjct: 1098 AGQKGERGEPGGGGF---FGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPG 1154

Query: 155  ERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGP 197
                     P    PP PPS     R +  +   P P GP GP
Sbjct: 1155 IGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGP 1197


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 63/212 (29%), Positives = 79/212 (37%), Gaps = 38/212 (17%)

Query: 35   SSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHW 94
            SS A+A PGL        +   G AP +   P     PP +P+  I+PG          W
Sbjct: 1242 SSPAAAAPGL---PEVGVSLDDGLAPFSPSHP----APPSDPSHQISPG--------PTW 1286

Query: 95   AAGR----RAQREQGAGAAVLADFGHVR---AAPSGLRRRRLQRRRGGRG----GRGAGR 143
               R    R  +E  A        G  R   A+P    R RL+   GG+G    GR A  
Sbjct: 1287 DIKREHDVRKPKELSACGQKKQRLGEQRERSASPQRAARPRLEEAPGGQGRPEAGRPASE 1346

Query: 144  ARKPG--------PDRAGAERSLPAHRAPRLAR---PPVPPSVAHVARASAG-LGARPVP 191
            AR PG          RAG + +  A     L R   P   P+ A      +G L A    
Sbjct: 1347 ARAPGLAAADAADAARAGGKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRA 1406

Query: 192  GGPAGPRESWARRTSSPPRGAAGGGRPFLHPG 223
            G  AGPR        +P R AA    P+  PG
Sbjct: 1407 GARAGPRPGPRPPGGAPARKAAVAPGPWKVPG 1438



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 36/101 (35%), Positives = 42/101 (41%), Gaps = 5/101 (4%)

Query: 9    KSTEPCDELRPMV--TLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGA-APATAES 65
            +S  P    RP +    G + R    RP+S A A PGL   +AA AA   G  AP  A  
Sbjct: 1316 RSASPQRAARPRLEEAPGGQGRPEAGRPASEARA-PGLAAADAADAARAGGKEAPRAAAG 1374

Query: 66   PDTPEEPPEEPAPAIAP-GGGGGGCGAQHWAAGRRAQREQG 105
             +         APA A  GGGG G       AG RA    G
Sbjct: 1375 SELCRREGPGAAPAFAGPGGGGSGALEAEGRAGARAGPRPG 1415



 Score = 35.8 bits (81), Expect = 0.031
 Identities = 49/192 (25%), Positives = 69/192 (35%), Gaps = 24/192 (12%)

Query: 11   TEPCDELRPMVTLGWRMRNSNSRPSSRASAGP-----GLCRTEAA----AAATRAGAAPA 61
            ++P  ++ P  T   +  +   +P   ++ G      G  R  +A    AA  R   AP 
Sbjct: 1274 SDPSHQISPGPTWDIKREHDVRKPKELSACGQKKQRLGEQRERSASPQRAARPRLEEAPG 1333

Query: 62   TAESPDTPEEPPEEPAPAIAPGGGG-----GGCGAQHWAAGRRAQREQGAGAAVLADFGH 116
                P+      E  AP +A          GG  A   AAG    R +G GAA       
Sbjct: 1334 GQGRPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRREGPGAA------P 1387

Query: 117  VRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVA 176
              A P G     L+    GR G  AG   +PGP   G   +  A  AP   + P    + 
Sbjct: 1388 AFAGPGGGGSGALEAE--GRAGARAG--PRPGPRPPGGAPARKAAVAPGPWKVPGSDKLP 1443

Query: 177  HVARASAGLGAR 188
             V +  A   +R
Sbjct: 1444 SVLKPGASAASR 1455


>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 292

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 70/239 (29%), Positives = 83/239 (34%), Gaps = 34/239 (14%)

Query: 5   RPMLKSTEPCDELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAE 64
           RP  +   P      +     R    ++ P  R S    LC      A +   A P  A 
Sbjct: 18  RPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLC------AGSSCLATPEPAR 71

Query: 65  SPDTPEEPPEEPAPAIAPG--GGGGGCGAQHWAAGRRAQREQGAGAAVLADFG-HVRAAP 121
           +P   E  P  P  A  PG   GGGGC          A+ E    +    D    V AAP
Sbjct: 72  APSIAEPGPGIPVAAAKPGVLPGGGGCTG--------ARTENPPLSPTRGDCRVPVPAAP 123

Query: 122 SGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPV----PPSVAH 177
             LR R    R    GG  AGRA  P  D+A     L    AP+L  P V    PP  + 
Sbjct: 124 ISLRWR--SGREARPGGPQAGRAGDPKADQA---MHLQPAWAPKLQPPSVCRQQPPGNSR 178

Query: 178 VARASAGLGARP-VPGGPAGPRES-------WARRTSSPPRGAAGGGRPFLHPGGRGDP 228
               S  LG R   P G    R S          R S+P R A       +   GRG P
Sbjct: 179 ARPHSPHLGTRARCPCGCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGP 237


>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
           sapiens]
          Length = 935

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 52/159 (32%), Positives = 60/159 (37%), Gaps = 33/159 (20%)

Query: 65  SPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGL 124
           SP  P E  +    A  PG G G  GA+     RRA+  Q                 +  
Sbjct: 751 SPPAPGESRDRARGAGQPGPGSGS-GAERAGPERRARDTQ-----------------TRT 792

Query: 125 RRRRL-QRRRGGRGGRGAGRA--RKPGPDRAGAERSLPAHRAPRLARP-----PVPPSVA 176
           RR +L    RGGR    AGR   R+ G  RAGA       RA   AR      P+P +  
Sbjct: 793 RRDKLTDSARGGRARLTAGRRVRRESGRRRAGATSQGAIRRAASRARKGESRRPLPAN-- 850

Query: 177 HVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGG 215
                SAG  A P P      R SW  R S P R A  G
Sbjct: 851 -----SAGRPALPSPAAARSARGSWGLRASRPSRAAPRG 884


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 52/181 (28%), Positives = 63/181 (34%), Gaps = 11/181 (6%)

Query: 57  GAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGH 116
           G  P     P  P    +  AP    G G  G   +    G         GA      G 
Sbjct: 647 GGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGG 706

Query: 117 VRAA-----PSGLRRRRLQRRRGGRGGRGAG--RARKPGPDRAGAERSLPAHRAPRLARP 169
             AA     P       LQ   G RGG G+   +  K  P   GA+  +P    PR    
Sbjct: 707 KGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGAD-GVPGKDGPRGPTG 765

Query: 170 PVPPSVAHVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAG-GGRPFLH--PGGRG 226
           P+ P          G G  P   G AGPR S   R  + P G AG  G P  +  PGG+G
Sbjct: 766 PIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKG 825

Query: 227 D 227
           +
Sbjct: 826 E 826



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 48/170 (28%), Positives = 59/170 (34%), Gaps = 28/170 (16%)

Query: 57   GAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGH 116
            G      +S D  E  P  PA A  P G  G  G Q     +    E+GA          
Sbjct: 1053 GPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAG-------- 1104

Query: 117  VRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVA 176
                        ++  RG  G  GA  +  PGP  AG + ++ +   P   R PV PS  
Sbjct: 1105 ------------IKGHRGFPGNPGAPGS--PGP--AGQQGAIGSP-GPAGPRGPVGPSGP 1147

Query: 177  HVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRG 226
                   G    P P GP GPR +   R S    G  G   P   PG  G
Sbjct: 1148 P---GKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPG 1194



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 58/202 (28%), Positives = 67/202 (33%), Gaps = 22/202 (10%)

Query: 34  PSSRASAG-PGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPG--GGGGGCG 90
           P  R   G PG    +       A   P   + P  P  P   P PA  PG  G GG  G
Sbjct: 728 PGERGGLGSPGPKGDKGEPGGPGADGVPGK-DGPRGPTGPIGPPGPAGQPGDKGEGGAPG 786

Query: 91  AQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRR-GGRGGRGA-GRARKPG 148
               A  R +  E+G               P+G      Q    GG+G RGA G   + G
Sbjct: 787 LPGIAGPRGSPGERGETGP---------PGPAGFPGAPGQNGEPGGKGERGAPGEKGEGG 837

Query: 149 PDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPG--GPAGPRESWARRTS 206
           P         P    P  A PP P  V     +  G GA   PG  G  GP  S      
Sbjct: 838 PPGVAGP---PGGSGP--AGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGP 892

Query: 207 SPPRGAAGGGRPFLHPGGRGDP 228
             P G+ G   P    G  G P
Sbjct: 893 PGPSGSPGKDGPPGPAGNTGAP 914



 Score = 37.7 bits (86), Expect = 0.008
 Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 134 GGRGGRGA-GRARKPG-PDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVP 191
           G  G RGA G   +PG P  AGA  +  A  +     PP PP  A     S G      P
Sbjct: 297 GPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFP-GSPGAKGEVGP 355

Query: 192 GGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
            G  G   +  +R    P+G AG   P   PG  G P
Sbjct: 356 AGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSP 392



 Score = 37.0 bits (84), Expect = 0.014
 Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 134 GGRGGRG-AGRARKPGPDRAGAERSLPAHRAPRLAR-PPVPPSVAHVARASAGLGARPVP 191
           G  G +G  G A  PG + A  +R  P  +    A+ PP PP +         +G   +P
Sbjct: 345 GSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIP 404

Query: 192 GGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           G P             PP  A   G P L  GG G+P
Sbjct: 405 GAPG------LMGARGPPGPAGANGAPGLR-GGAGEP 434



 Score = 37.0 bits (84), Expect = 0.014
 Identities = 58/213 (27%), Positives = 72/213 (33%), Gaps = 27/213 (12%)

Query: 30   SNSRPSSRASAG-PGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAI-----APG 83
            SN  P     +G PG       A  T A  +P  +       +P E+ +P       APG
Sbjct: 886  SNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPG 945

Query: 84   --GGGGGCGAQHWAA--GRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGR 139
              G  G  GA+  A   G    R       V  + G   A         L   RG  G +
Sbjct: 946  PLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGA-------NGLSGERGPPGPQ 998

Query: 140  G----AGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPA 195
            G    AG A +PG D       LP        +     + +  A  + G    P P GP 
Sbjct: 999  GLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPG---HPGPPGPV 1055

Query: 196  GPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
            GP      R  S P G AG   P    G RG P
Sbjct: 1056 GPAGKSGDRGESGPAGPAGAPGP---AGSRGAP 1085



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 54/208 (25%), Positives = 71/208 (34%), Gaps = 28/208 (13%)

Query: 34   PSSRASAGPGLCRTEAAAAATRAGAAPATAE-SPDTPEEPPEEPAPAIAPGGGGG----G 88
            P  R S GP   + E+     + GA   + E  P  P+  P     A  PG  G     G
Sbjct: 965  PGPRGSPGPQGVKGESG----KPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDG 1020

Query: 89   CGAQHWAAGRRAQREQGAGAAVLADFGHVR----AAPSGLRRRRLQRRRGGRGGRG-AGR 143
               +  + G +  R +          GH        P+G        + G RG  G AG 
Sbjct: 1021 LPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAG--------KSGDRGESGPAGP 1072

Query: 144  ARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARP-VPG--GPAGPRES 200
            A  PGP      R  P  + PR  +       A   +   G    P  PG  GPAG + +
Sbjct: 1073 AGAPGP---AGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGA 1129

Query: 201  WARRTSSPPRGAAGGGRPFLHPGGRGDP 228
                  + PRG  G   P    G  G P
Sbjct: 1130 IGSPGPAGPRGPVGPSGPPGKDGTSGHP 1157



 Score = 34.7 bits (78), Expect = 0.069
 Identities = 55/225 (24%), Positives = 66/225 (29%), Gaps = 38/225 (16%)

Query: 31  NSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCG 90
           N  P  +   GP            R    PA A             AP +  G G  G  
Sbjct: 389 NGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANG-----------APGLRGGAGEPGKN 437

Query: 91  AQHWAAGRRAQREQGAGAAVLADFGH--VRAAPSGLRRRRLQRRRGGRGGRG----AGRA 144
                 G R +R +     V    G      +P       L    G RG  G    AG  
Sbjct: 438 GAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPN 497

Query: 145 RKPGPDRAGAERSLPAHRAPRLA-----RPPVP--PSVAHVARASAGLGA---------- 187
             PG      ER  P    PR A     R  VP  P +  +  +  G G+          
Sbjct: 498 GIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQ 557

Query: 188 ----RPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
               RP P GP+GPR          P+G  G        GG G P
Sbjct: 558 GESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGP 602


>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 447

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 35/99 (35%), Positives = 39/99 (39%), Gaps = 5/99 (5%)

Query: 128 RLQRRRGGRGGRGAGRARKPG-PDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLG 186
           R  R   G  G G+G   +P  P RA A RS P+ R PR  +      V   ARA AG  
Sbjct: 278 RAPRTSAGLAGVGSGAPGEPAEPGRARAPRSAPSSREPRQTKR----RVGSRARAGAGAV 333

Query: 187 ARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGR 225
             P P    G R SW      P  G A    P   P  R
Sbjct: 334 TGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSAPHPR 372



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 58/204 (28%), Positives = 74/204 (36%), Gaps = 28/204 (13%)

Query: 16  ELRPMVTLGWRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEE 75
           EL   +T G R  ++  + S   + G   C     + A      P  A+ P  P   P+ 
Sbjct: 218 ELLFAITSGERAASAPRQESHNFAKG---CAEFYGSGARAQPGGPCWAQGP--PGRLPDP 272

Query: 76  -PAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRG 134
            P P  AP    G  G    A G  A  E G   A        R+APS    R+ +RR G
Sbjct: 273 IPLPTRAPRTSAGLAGVGSGAPGEPA--EPGRARAP-------RSAPSSREPRQTKRRVG 323

Query: 135 GRGGRGAGRARKPGPDRA-GAERSLPAHR---APRLARPPVPPSVAHVARASAGLGARPV 190
            R   GAG    P P  A GA  S P+ R   +   AR   P S  H  R +        
Sbjct: 324 SRARAGAGAVTGPCPAAAQGARGSWPSPRCLPSDGGAREAPPTSAPHPRRPA-------- 375

Query: 191 PGGPAGPRESWARRTSSPPRGAAG 214
            G P    +   RR+  P     G
Sbjct: 376 -GSPPALADREGRRSLVPQTSIQG 398


>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
          Length = 417

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 52/201 (25%), Positives = 75/201 (37%), Gaps = 26/201 (12%)

Query: 28  RNSNSRPSSRASAGPGLCRTEAAAAAT----------RAGAAPA-TAESPDTPEEPPEEP 76
           +    +P  R + G G  R   ++ +            A AAPA T+    T +  P++P
Sbjct: 157 KRKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQP 216

Query: 77  APAIAPGGGGG---GCGAQHWAAGRRAQ--REQGAGAAVLADFGHVRAAPSGLRRRRLQR 131
                P GG G   G  +   A  +RAQ   E+ A A      GH        + ++ QR
Sbjct: 217 Q--CRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGH---RTEKRKPQQPQR 271

Query: 132 RRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVP 191
           R  G  G+  G    P  D+ GA+      R    A  P P S  H       L  +  P
Sbjct: 272 RPAGGTGQRRGSGYSPSADQQGAQ-----DREEEAAAAPAPTSSGHRTEKRKRLQLQCQP 326

Query: 192 GGPAGPRESWARRTSSPPRGA 212
            G  G R      +S+  +GA
Sbjct: 327 AGGTGQRRGSGCSSSANQQGA 347



 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 54/208 (25%), Positives = 75/208 (36%), Gaps = 25/208 (12%)

Query: 5   RPMLKSTEPCDELRPMVTLGWRMRNSNSRPSS----------RASAGPGLCRTEAAAAAT 54
           +P+    +P  + +P    G R R S S PS+           A+A P   +  A     
Sbjct: 31  KPLRPQQQP--QCQPAGGTGQR-RGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREE 87

Query: 55  RAGAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAAG--RRAQ--REQGAGAAV 110
            A AAP    S    E+           GG G   G++   +   +RAQ   E+ A A V
Sbjct: 88  EAAAAPVPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPV 147

Query: 111 LADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPP 170
               GH        +R++ QRR  G  G+  G    P  D+ GA+      R    A  P
Sbjct: 148 PTSRGH---RTEKRKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQ-----DREEEAAAAP 199

Query: 171 VPPSVAHVARASAGLGARPVPGGPAGPR 198
            P S  H          +  P G  G R
Sbjct: 200 APTSRGHRTEKRKPQQPQCRPAGGTGQR 227



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%)

Query: 56  AGAAPATAESPDTPEEPPEEPAPAIAPGGGG----GGCGAQHWAAGRRAQREQGAGAAVL 111
           A AAPA   S    E+           GG G     GC +     G + + E+ A A V 
Sbjct: 301 AAAAPAPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSGCSSSANQQGAQDREEEAAAAPVP 360

Query: 112 ADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAE 155
              GH        + ++ QRR     G+  G    P  D+  A+
Sbjct: 361 TSSGH---RTEKRKPQQPQRRPAAGTGQRRGSGSSPSADQQRAQ 401


>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 113

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 130 QRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARP 189
           +R R   GG G+G+A++PGP R G+ R  P  + P  A P  PP+    A   +G G   
Sbjct: 14  ERARAPSGG-GSGQAQRPGPGR-GSWRRPPRRQRPGPAAPS-PPARGAAAWGRSGGGPAA 70

Query: 190 VPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGR 225
             GG  G      RR  + P G  GGG     PGGR
Sbjct: 71  QSGGDGG---GLPRRAGAEP-GGRGGGSGGTMPGGR 102



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 27/76 (35%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 25  WRMRNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGG 84
           WR      RP   A + P       AAA  R+G  PA     D    P    A    PGG
Sbjct: 37  WRRPPRRQRPGPAAPSPPA----RGAAAWGRSGGGPAAQSGGDGGGLPRRAGA---EPGG 89

Query: 85  GGGGCGAQHWAAGRRA 100
            GGG G      GRRA
Sbjct: 90  RGGGSGGT-MPGGRRA 104



 Score = 32.3 bits (72), Expect = 0.34
 Identities = 35/91 (38%), Positives = 35/91 (38%), Gaps = 15/91 (16%)

Query: 79  AIAPGGGGGGC------GAQHWAAGRRAQREQGA-------GAAVLADFGHVRAAPSGLR 125
           A AP GGG G       G   W    R QR   A       GAA     G   AA SG  
Sbjct: 16  ARAPSGGGSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPARGAAAWGRSGGGPAAQSGGD 75

Query: 126 RRRLQRRRGGR-GGRGAGR-ARKPGPDRAGA 154
              L RR G   GGRG G     PG  RA A
Sbjct: 76  GGGLPRRAGAEPGGRGGGSGGTMPGGRRAAA 106


>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 212

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 57/198 (28%), Positives = 74/198 (37%), Gaps = 42/198 (21%)

Query: 49  AAAAATRAGAAPATAESPDTP------------EEPPEEPAPAIAPGGGGGGCGAQHWAA 96
           AA + TR G++P +A  P TP               P    P  AP G GG        A
Sbjct: 20  AALSCTRVGSSPPSAPLPQTPPTKRPERFRLHSPRAPGSAQPISAPEGRGG--------A 71

Query: 97  GRRAQREQGAGAAVLADFGHV--RAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGA 154
           G R++   G G    A  G V  R  P+G      +R R    G    R     P  +  
Sbjct: 72  GSRSRYCHGDGKLAAAAAGTVGPRWLPAGQCLSEAERPRRPEPGGARSRPVAASPAASSR 131

Query: 155 ERSLP--AHRAPRLARPPVPPSVAHVARASAGLGARP-------------VPGGPAGPRE 199
            RS P  +  AP  + P + PS+  +A A   L ARP             V  GP  P  
Sbjct: 132 ARSRPESSPGAPGSSVPALLPSLPPLA-APRPLSARPRLRPPQPQPLALTVGNGPRAPPA 190

Query: 200 SWARRTSSPPRGAAGGGR 217
             +R+    PRG+  G R
Sbjct: 191 GGSRQ----PRGSVRGPR 204


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 51/167 (30%), Positives = 59/167 (35%), Gaps = 37/167 (22%)

Query: 72  PPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQR 131
           PP  P+P+ A  G  G  G++    G     E+                P   R  RL  
Sbjct: 28  PPPPPSPSAAAAGAAGARGSETGDPGSPRGAEE----------------PGKKRHERLFH 71

Query: 132 RRG----GRGGRGAGRARKPGPDRAGAERSLPAHRAP--RLARPPVPPSVAHVARASAGL 185
           R+          G G A  P    A A  + P   AP  RL+   VPP        S GL
Sbjct: 72  RQDALWISTSSAGTGGAEPPALSPAPASPARPVSPAPGRRLSLWAVPPG----PPLSGGL 127

Query: 186 GARPVPGGPAGPRESWARRTSSP------PRGAAGGGRP---FLHPG 223
              P PGG   P  S     SSP      P G AGGG P     HPG
Sbjct: 128 SPDPKPGG--APTSSRRPLLSSPSWGGPEPEGRAGGGIPGSSSPHPG 172



 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 60/220 (27%), Positives = 73/220 (33%), Gaps = 38/220 (17%)

Query: 13  PCDELRPMVTL-GWRMRNSNSRPSSRASAG-PGLCRTEAAAAATRAGAAPATAESPDTPE 70
           P    RP+++   W        P  RA  G PG         + R   AP     P    
Sbjct: 137 PTSSRRPLLSSPSW----GGPEPEGRAGGGIPGSSSPHPGTGSRRLKVAP-----PPPAP 187

Query: 71  EPPEEPAPAIAPGGGGGGCGAQ-HWAAGRRAQREQGA------GAAVLADFGHVRAAPSG 123
           +P +    + A  GGG G G++  W       R +G+      GA+V A      A   G
Sbjct: 188 KPCKTVTTSGAKAGGGKGAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGG 247

Query: 124 LRRRRLQRRRGGRGGRGAGRARKPGP---DRAGAERSLPAHRAPRLARPPVPPSVAHVAR 180
                      G G RG    RK      D +      PA   P L  PP P     V  
Sbjct: 248 STASTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTA 307

Query: 181 ASAGLGARPVPGGPAGPRESWARRTSSPP-----RGAAGG 215
           ASA       P GPA P       T  PP     RG  GG
Sbjct: 308 ASA------QPPGPAPP------ITLEPPAPGLKRGREGG 335


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 54/171 (31%), Positives = 69/171 (40%), Gaps = 21/171 (12%)

Query: 69  PEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQR-EQGAGAAVLADFGHVR-AAPSGLRR 126
           P  PP E  P  +   GGG     ++  GR+ Q+ E G    V    G    A P G + 
Sbjct: 85  PVTPPGECCPVCSQTPGGGNT---NFGRGRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQG 141

Query: 127 RRLQR----RRGGRGGRGA-GRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARA 181
            R +R    R G RG +G  G    PG   A      P+H  P     P    +A +   
Sbjct: 142 PRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEK 201

Query: 182 SAGLGARP--VPG--GPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           S GLG++   +PG  GP GPR     +      G  GG  P   PG  GDP
Sbjct: 202 S-GLGSQVGLMPGSVGPVGPRGPQGLQ------GQQGGAGPTGPPGEPGDP 245



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 56/208 (26%), Positives = 68/208 (32%), Gaps = 28/208 (13%)

Query: 34   PSSRASAG-PGLCRTEAAAAATRAGAAPATAES-PDTPEEPPEEPAPAIAPG----GGGG 87
            P  R   G PGL     A    + G   AT +  P  P  PP    P   PG     G  
Sbjct: 998  PGQRGERGMPGL--PGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGND 1055

Query: 88   GCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRG------- 140
            G   +  A G R  R     A +    G     P  +       +RG  G RG       
Sbjct: 1056 GTPGRDGAVGERGDRGDPGPAGLPGSQG-APGTPGPVGAPGDAGQRGDPGSRGPIGPPGR 1114

Query: 141  AGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRES 200
            AG+   PGP     ++     R  R  +        H  R   GL   P P GP G + S
Sbjct: 1115 AGKRGLPGPQGPRGDKGDHGDRGDRGQK-------GH--RGFTGLQGLPGPPGPNGEQGS 1165

Query: 201  WARRTSSPPRGAAGGGRPFLHPGGRGDP 228
                    PRG  G   P    G  G+P
Sbjct: 1166 AGIPGPFGPRGPPG---PVGPSGKEGNP 1190



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)

Query: 133 RGGRGGRGA-GRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVP 191
           +G  G  G  G    PG      ER +     P+  R  +    A     + G    P P
Sbjct: 743 KGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGP 802

Query: 192 GGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGD 227
            GP GP      +    PRG  G      +PG RG+
Sbjct: 803 LGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGE 838



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 54/207 (26%), Positives = 66/207 (31%), Gaps = 35/207 (16%)

Query: 37   RASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQHWAA 96
            R + GP        +A       PA A  P  P   P +  P    G  G      H   
Sbjct: 899  RGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGS-----HGRV 953

Query: 97   GRRAQREQGAGAAVLADFGHVRA-------APSGLRRRR----LQRRRGGRGGRG----A 141
            G R       G     D G            P+G   +R    +  +RG RG  G    A
Sbjct: 954  GDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPA 1013

Query: 142  GRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRESW 201
            G   K GP  A  ++  P         P  PP        S G    P P GPAG   + 
Sbjct: 1014 GTPGKVGPTGATGDKGPPG--------PVGPPG-------SNGPVGEPGPEGPAGNDGTP 1058

Query: 202  ARRTSSPPRGAAGGGRPFLHPGGRGDP 228
             R  +   RG  G   P   PG +G P
Sbjct: 1059 GRDGAVGERGDRGDPGPAGLPGSQGAP 1085



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 9/104 (8%)

Query: 133 RGGRGGRGAGRARKPGPDRAG-----AERSLPAHRAPRLARPPVPPSVAHVARASAGLGA 187
           +G  G RG      P  DR G     AE +     A  L  P  PP  A         G 
Sbjct: 761 QGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGP 820

Query: 188 RPVPGGPAGPRESWARRTSSPPRGA---AGGGRPFLHPGGRGDP 228
           R + G P G R +   R  + P GA   AG   P   PG +G+P
Sbjct: 821 RGLVG-PPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEP 863



 Score = 29.3 bits (64), Expect = 2.9
 Identities = 46/173 (26%), Positives = 57/173 (32%), Gaps = 29/173 (16%)

Query: 69  PEEPPEEPAPAIAPGGGG--------GGCGAQHWAA--------GRRAQRE-QGAGAAVL 111
           PE PP +P     PG  G        G  GA+ +          G R  +  +G    V 
Sbjct: 256 PEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVG 315

Query: 112 ADFGHVRAAPSGLRRRRLQRRRGGRGGRGA-GRARKPGPDRAGAERSLPAHRAPRLARPP 170
           A      A P+G          G  G RG  G   + GP  A  +R   AH  P    P 
Sbjct: 316 APGSKGEAGPTGP-----MGAMGPLGPRGMPGERGRLGPQGAPGQRG--AHGMPGKPGPM 368

Query: 171 VPPSVAHVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPG 223
            P  +      S+G    P   G AGP  +         RG  G   P   PG
Sbjct: 369 GPLGIP----GSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPG 417


>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
          Length = 1006

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 50/188 (26%), Positives = 61/188 (32%), Gaps = 12/188 (6%)

Query: 48  EAAAAATRAGAAPATAESPD----TPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQRE 103
           E A AA R  A P  A +P      P+ P   P P     G GG    +  A GR ++  
Sbjct: 607 EDAPAARRPKAPPGPARAPPGQPAEPDAPRSSPGPGAREEGAGGAATPEDGAGGRGSEGS 666

Query: 104 QGAGAAV---LADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPA 160
           Q  G++V     D          +R  R +     +    A R   P P R  A    P 
Sbjct: 667 QSPGSSVDDAEDDPSRTLCEACNIRFSRHETYTVHKRYYCASR-HDPPPRRPAAPPGPPG 725

Query: 161 HRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFL 220
             AP    P  P       R    L      G P  P    A    SP  G+  G  P L
Sbjct: 726 PAAPPAPSPAAPVR----TRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSGSGPGL 781

Query: 221 HPGGRGDP 228
            P     P
Sbjct: 782 APARSPGP 789



 Score = 31.2 bits (69), Expect = 0.77
 Identities = 53/216 (24%), Positives = 66/216 (30%), Gaps = 42/216 (19%)

Query: 38  ASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAP-----------AIAPGGGG 86
           +S  P   R+    A     AAP        P+ P   P+P             +P  G 
Sbjct: 452 SSEPPAAPRSIKVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSPAPARVKAELSSPTPGS 511

Query: 87  GGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARK 146
                +   AG     +   G         + A  S L   RLQ +  G G  GA     
Sbjct: 512 SPVPGELGLAGALFLPQYVFGPDAAPPASEILAKMSELVHSRLQ-QGAGAGAGGAQTGLF 570

Query: 147 PGPDRAG-----------------------AERSLPAHRAPRLARPPVPPSVAHVARASA 183
           PG  +                         + R  P   AP   RP  PP     ARA  
Sbjct: 571 PGAPKGATCFECEITFSNVNNYYVHKRLYCSGRRAP-EDAPAARRPKAPPG---PARAPP 626

Query: 184 GLGARP-VPGGPAGP--RESWARRTSSPPRGAAGGG 216
           G  A P  P    GP  RE  A   ++P  GA G G
Sbjct: 627 GQPAEPDAPRSSPGPGAREEGAGGAATPEDGAGGRG 662


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 63/201 (31%), Positives = 74/201 (36%), Gaps = 31/201 (15%)

Query: 42   PGLCRTEAAAAAT----RAGAAPATAESPDT-PEEPPEEPAPAIAPGGGGGGCGAQHWAA 96
            PG    E A  A     R G+  A  +  +T P  PP  P    APG  G         A
Sbjct: 1009 PGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVG--------PA 1060

Query: 97   GRRAQREQGAGAAVLADFGHVRA----APSGLRRRR----LQRRRGGRGGRG-AGRARKP 147
            G+   R +   A      G V A     P G R  +     Q  RG +G RG +G    P
Sbjct: 1061 GKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPP 1120

Query: 148  GPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRESWARRTSS 207
            GP  +  E+       P  A P  PP  A  A    GL   P P GP GPR    R   +
Sbjct: 1121 GPPGSPGEQGPSGASGP--AGPRGPPGSAG-APGKDGLNGLPGPIGPPGPR---GRTGDA 1174

Query: 208  PPRGAAGGGRPFLHPGGRGDP 228
             P G  G   P   PG  G P
Sbjct: 1175 GPVGPPGPPGP---PGPPGPP 1192



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 56/206 (27%), Positives = 67/206 (32%), Gaps = 12/206 (5%)

Query: 34  PSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEE---PAPAIAPGGGGGGCG 90
           P    + GP     EA A      A PA       P   P     P PA  P G  G  G
Sbjct: 601 PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPA-GPPGEAGKPG 659

Query: 91  AQHWAAGRRAQREQGA-GAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRG-AGRARKPG 148
            Q       A    GA G         V+  P     R      G  G +G AG    PG
Sbjct: 660 EQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPG 719

Query: 149 PDRAGAERSLPAHRA------PRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRESWA 202
              A   + +P  R       P+  R    P  A  +    G+     P GP GP  +  
Sbjct: 720 SQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPG 779

Query: 203 RRTSSPPRGAAGGGRPFLHPGGRGDP 228
            +  S P G AG       PG RG+P
Sbjct: 780 DKGESGPSGPAGPTGARGAPGDRGEP 805



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 59/213 (27%), Positives = 66/213 (30%), Gaps = 29/213 (13%)

Query: 34  PSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPG-GGGGGCGAQ 92
           P     AGP        A        P  +E P      P  P PA A G  G  G   Q
Sbjct: 334 PGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQ 393

Query: 93  HWAAGRRAQREQGAGAAVLADFGHVRAAPSGLR-------RRRLQRRRGGRGGRG-AGRA 144
             A G         G A    F   R  PSG +        +      G  G +G  G  
Sbjct: 394 PGAKGANG----APGIAGAPGFPGAR-GPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAK 448

Query: 145 RKPG-------PDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPG--GPA 195
            +PG       P  AG E    A   P     P PP          G G+R  PG  G A
Sbjct: 449 GEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPG------ERGGPGSRGFPGADGVA 502

Query: 196 GPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           GP+     R S  P G  G       PG  G P
Sbjct: 503 GPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 535



 Score = 36.6 bits (83), Expect = 0.018
 Identities = 36/109 (33%), Positives = 39/109 (35%), Gaps = 11/109 (10%)

Query: 120 APSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVA 179
           AP  +  R L   RG  G  G   AR  G D A      P    P  A PP  P     A
Sbjct: 297 APGQMGPRGLPGERGRPGAPGPAGAR--GNDGATGAAGPPGPTGP--AGPPGFPGAVG-A 351

Query: 180 RASAGLGARPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           +  AG      P GP G       R    P G AG   P  +PG  G P
Sbjct: 352 KGEAG------PQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQP 394



 Score = 35.0 bits (79), Expect = 0.053
 Identities = 55/209 (26%), Positives = 73/209 (34%), Gaps = 24/209 (11%)

Query: 28  RNSNSRPSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGG- 86
           + ++  P +  S G    + E      +    PA  E          EP P   PG  G 
Sbjct: 430 KGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARG---EPGPTGLPGPPGE 486

Query: 87  -GGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGR-GA--- 141
            GG G++ +         +G               P+G +    +  R G  G  GA   
Sbjct: 487 RGGPGSRGFPGADGVAGPKGPAGE------RGSPGPAGPKGSPGEAGRPGEAGLPGAKGL 540

Query: 142 -GRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAG-PRE 199
            G    PGPD        PA +  R   PP PP     AR  AG+   P P G AG P +
Sbjct: 541 TGSPGSPGPDGKTGPPG-PAGQDGRPG-PPGPPG----ARGQAGVMGFPGPKGAAGEPGK 594

Query: 200 SWARRTSSPPRGAAGGGRPFLHPGGRGDP 228
           +  R    PP GA G        G +G P
Sbjct: 595 AGERGVPGPP-GAVGPAGKDGEAGAQGPP 622



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 48/197 (24%), Positives = 59/197 (29%), Gaps = 16/197 (8%)

Query: 46   RTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGG-GCGAQHWAAGRRAQREQ 104
            R E   A       P     P   +  P    PA APG  G  G   Q    G   QR +
Sbjct: 910  RGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGE 969

Query: 105  GAGAAVLADFGHV-RAAPSGLRRRRLQRRRGGRGGRG-----AGRARKPGPDRAGAERSL 158
                 +    G   +  PSG    R      G  G       +GR   PG + +      
Sbjct: 970  RGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGS 1029

Query: 159  PAHRAPRLARPPV-PPSVAHVARASAGLG--------ARPVPGGPAGPRESWARRTSSPP 209
            P  +  R    P  PP       A   +G            P GPAGP      R  + P
Sbjct: 1030 PGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGP 1089

Query: 210  RGAAGGGRPFLHPGGRG 226
            +G  G        G RG
Sbjct: 1090 QGPRGDKGETGEQGDRG 1106



 Score = 32.3 bits (72), Expect = 0.34
 Identities = 58/207 (28%), Positives = 70/207 (33%), Gaps = 16/207 (7%)

Query: 34  PSSRASAG-PGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPG--GGGGGCG 90
           P  R +AG PG       A    A  +P   +       P   P PA APG  G  G  G
Sbjct: 730 PGERGAAGLPGPKGDRGDAGPKGADGSPGK-DGVRGLTGPIGPPGPAGAPGDKGESGPSG 788

Query: 91  AQHWAAGRRAQREQGA-GAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRG----AGRAR 145
                  R A  ++G  G    A F     A      +      G +G  G    AG A 
Sbjct: 789 PAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG 848

Query: 146 KPGPDRAGAERSLPAHRAPRLARPP----VPPSVAHVARAS-AGLGARPVPGGPAGPRES 200
            PGP   G   +  A  A   A PP     P +   V     +G    P P GPAG    
Sbjct: 849 PPGP--IGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGG 906

Query: 201 WARRTSSPPRGAAGGGRPFLHPGGRGD 227
              R  + P G  G   P   PG  G+
Sbjct: 907 KGPRGETGPAGRPGEVGPPGPPGPAGE 933



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 29/98 (29%), Positives = 34/98 (34%), Gaps = 6/98 (6%)

Query: 134 GGRGGRGA-GRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPG 192
           G RG  GA G A  PGP         P     +    P  P  +   +   G    P P 
Sbjct: 320 GARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPA 379

Query: 193 GPAGPRESWARRTSSPPRGAAG----GGRPFLHPGGRG 226
           G AGP  +         +GA G     G P   PG RG
Sbjct: 380 GAAGPAGNPGADGQPGAKGANGAPGIAGAPGF-PGARG 416



 Score = 28.1 bits (61), Expect = 6.5
 Identities = 30/88 (34%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 142 GRARKPG-PDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPRES 200
           G A KPG P   G      A   P  A   +P    H  R  +GL       GPAGP+  
Sbjct: 233 GEAGKPGRPGERGPPGPQGARGLPGTAG--LPGMKGH--RGFSGLDGAKGDAGPAGPK-- 286

Query: 201 WARRTSSPPRGAAGGGRPFLHPGGRGDP 228
                S    GA G   P   PG RG P
Sbjct: 287 -GEPGSPGENGAPGQMGPRGLPGERGRP 313


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 57/220 (25%), Positives = 75/220 (34%), Gaps = 41/220 (18%)

Query: 9   KSTEPCDELRPMVTLGWRMRNSNSRPSSRASAG-PGLCRTEAAAAATRAGAAPATAESPD 67
           ++  P    R     G R R    RP++R SA  P L R   A+A + A A+ A +  P 
Sbjct: 223 RAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLA-ASLARSPPPL 281

Query: 68  TPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRR 127
            P      P    AP  G        +   RR +R      A     GH    P  L   
Sbjct: 282 QPRLGSASPPRLAAPLAGSRAPSLSPFP--RRCRRRAERSPA-----GHGLPLPRSL--- 331

Query: 128 RLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGA 187
                   RGG   G  R+    R G ER +   R                      LG+
Sbjct: 332 -------SRGGEVVGARRR----RGGEERRVRGRRQ------------------GCALGS 362

Query: 188 RPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGD 227
            P+P GPA P  +  RR +   R   GG       G +G+
Sbjct: 363 PPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGE 402



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 16/111 (14%)

Query: 122 SGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAP----RLARP----PVPP 173
           SG RR +  + + GRG         P P R  A R L + R P    RL+ P    P P 
Sbjct: 117 SGTRRGKTGQWKEGRGSHPT-----PEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQ 171

Query: 174 SVAHVARASAGLGARPVPGGPAGPRESWARRTSS--PPRGAAGGGRPFLHP 222
           S    +    G G+  VP G    +++W +R+S    P G+     P   P
Sbjct: 172 SFRRPSAHPPGRGSGRVPRGQP-EQQAWEQRSSHFLAPEGSVASLLPSAKP 221


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 57/220 (25%), Positives = 75/220 (34%), Gaps = 41/220 (18%)

Query: 9   KSTEPCDELRPMVTLGWRMRNSNSRPSSRASAG-PGLCRTEAAAAATRAGAAPATAESPD 67
           ++  P    R     G R R    RP++R SA  P L R   A+A + A A+ A +  P 
Sbjct: 223 RAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLA-ASLARSPPPL 281

Query: 68  TPEEPPEEPAPAIAPGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRR 127
            P      P    AP  G        +   RR +R      A     GH    P  L   
Sbjct: 282 QPRLGSASPPRLAAPLAGSRAPSLSPFP--RRCRRRAERSPA-----GHGLPLPRSL--- 331

Query: 128 RLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGA 187
                   RGG   G  R+    R G ER +   R                      LG+
Sbjct: 332 -------SRGGEVVGARRR----RGGEERRVRGRRQ------------------GCALGS 362

Query: 188 RPVPGGPAGPRESWARRTSSPPRGAAGGGRPFLHPGGRGD 227
            P+P GPA P  +  RR +   R   GG       G +G+
Sbjct: 363 PPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGE 402



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 16/111 (14%)

Query: 122 SGLRRRRLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAP----RLARP----PVPP 173
           SG RR +  + + GRG         P P R  A R L + R P    RL+ P    P P 
Sbjct: 117 SGTRRGKTGQWKEGRGSHPT-----PEPQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQ 171

Query: 174 SVAHVARASAGLGARPVPGGPAGPRESWARRTSS--PPRGAAGGGRPFLHP 222
           S    +    G G+  VP G    +++W +R+S    P G+     P   P
Sbjct: 172 SFRRPSAHPPGRGSGRVPRGQP-EQQAWEQRSSHFLAPEGSVASLLPSAKP 221


>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
           sapiens]
          Length = 870

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 61/231 (26%), Positives = 75/231 (32%), Gaps = 50/231 (21%)

Query: 35  SSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAP------------ 82
           SSRAS        E          APA +  P+ P  P E PAP+  P            
Sbjct: 547 SSRASFSSFDTTDEGPVYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIP 606

Query: 83  --------------GGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRR- 127
                          G GG   A       R  R +   A    + G +  +PS  RR+ 
Sbjct: 607 LPASSDSERSASSVEGPGGALYA-------RVARREARPARARGEIGGLSLSPSPERRKP 659

Query: 128 ---------RLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHV 178
                    ++    G      AGRA  P P  + A  S P+ R     R P   S AH 
Sbjct: 660 PPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPS-PSKR----KRTPSDKS-AHT 713

Query: 179 ARASAGLGARPVPGGPAGPRESWARRTSSPPRG-AAGGGRPFLHPGGRGDP 228
               +     P P  P  P E+ A    SPPR  A    RP    G R  P
Sbjct: 714 VEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSP 764


>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
           sapiens]
          Length = 865

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 61/231 (26%), Positives = 75/231 (32%), Gaps = 50/231 (21%)

Query: 35  SSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAP------------ 82
           SSRAS        E          APA +  P+ P  P E PAP+  P            
Sbjct: 542 SSRASFSSFDTTDEGPVYCVPHEEAPAESRDPEVPTVPAEAPAPSPVPLTTPASAEEAIP 601

Query: 83  --------------GGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRR- 127
                          G GG   A       R  R +   A    + G +  +PS  RR+ 
Sbjct: 602 LPASSDSERSASSVEGPGGALYA-------RVARREARPARARGEIGGLSLSPSPERRKP 654

Query: 128 ---------RLQRRRGGRGGRGAGRARKPGPDRAGAERSLPAHRAPRLARPPVPPSVAHV 178
                    ++    G      AGRA  P P  + A  S P+ R     R P   S AH 
Sbjct: 655 PPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPS-PSKR----KRTPSDKS-AHT 708

Query: 179 ARASAGLGARPVPGGPAGPRESWARRTSSPPRG-AAGGGRPFLHPGGRGDP 228
               +     P P  P  P E+ A    SPPR  A    RP    G R  P
Sbjct: 709 VEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSP 759


>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 182

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 45/165 (27%), Positives = 55/165 (33%), Gaps = 42/165 (25%)

Query: 34  PSSRASAGPGLCRTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGGGCGAQH 93
           P + A+   G        AA R+G       S      PP   AP+ +   G  G     
Sbjct: 4   PPATAATAAGGATGGGPQAARRSGVQGGQRNSTSARAPPPPPLAPSSSSSSGSSGSSGGG 63

Query: 94  WAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARKPGPDRAG 153
                      G+G+A     G + A   G   RR   R GGR G  A RAR+P      
Sbjct: 64  -----------GSGSAGQPTLGSMLAV--GSAARRASERAGGRAGGTALRAREP------ 104

Query: 154 AERSLPAHRAPRLARPPVPPSVAHVARASAGLGARPVPGGPAGPR 198
                     P L  PP PP              +P P GPA PR
Sbjct: 105 ---------PPPLLPPPSPP--------------QPGPKGPASPR 126


>gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens]
          Length = 578

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 48/156 (30%), Positives = 63/156 (40%), Gaps = 15/156 (9%)

Query: 29  NSNSRPSSRASAGPGLCRT-EAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAPGGGGG 87
           +S SR SS+    P +    +  A + ++G AP   E         EE  P++  GGGGG
Sbjct: 12  SSGSRSSSKVLPNPRILPGGDPPACSPQSGPAPHVLEK--------EEEGPSLNVGGGGG 63

Query: 88  GCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARKP 147
           G  ++       +   +G G           A   G    RL RR GGRG    G  R  
Sbjct: 64  GKPSRSLQEPNFSAARRGGGGEDEEKAQQPTALILGSLPPRLPRR-GGRGDSAGGGGR-- 120

Query: 148 GPDR-AGAERSLPAHRAPRLARPPVPPSVAHVARAS 182
             DR AG   + PAH A    RP  P + A   R S
Sbjct: 121 --DREAGRGEANPAHSARSPERPRKPEAGAQDFRDS 154


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.134    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,287,000
Number of Sequences: 37866
Number of extensions: 931483
Number of successful extensions: 13005
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 1430
Number of HSP's that attempted gapping in prelim test: 8321
Number of HSP's gapped (non-prelim): 4928
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.