Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239754487
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]
(424 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754487 PREDICTED: hypothetical protein [Homo sapiens] 879 0.0
gi|239749042 PREDICTED: hypothetical protein [Homo sapiens] 879 0.0
gi|239508713 PREDICTED: hypothetical protein [Homo sapiens] 879 0.0
gi|239743067 PREDICTED: hypothetical protein [Homo sapiens] 877 0.0
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 48 1e-05
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 46 7e-05
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 45 1e-04
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 44 3e-04
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 44 3e-04
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 42 8e-04
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 42 0.001
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 41 0.002
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 40 0.004
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 40 0.005
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 40 0.005
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 40 0.005
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi... 39 0.007
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 39 0.007
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 39 0.007
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 39 0.009
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 39 0.012
gi|4557509 cylicin 2 [Homo sapiens] 39 0.012
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa... 39 0.012
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 38 0.020
gi|13129006 nucleolar protein GU2 [Homo sapiens] 38 0.020
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 37 0.026
gi|239749652 PREDICTED: hypothetical protein [Homo sapiens] 37 0.026
>gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 879 bits (2271), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF
Sbjct: 1 MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
Query: 61 TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE
Sbjct: 61 TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
Query: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE
Sbjct: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
Query: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK
Sbjct: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
Query: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT
Sbjct: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
Query: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC
Sbjct: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
Query: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV
Sbjct: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
Query: 421 AKMT 424
AKMT
Sbjct: 421 AKMT 424
>gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 879 bits (2271), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF
Sbjct: 1 MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
Query: 61 TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE
Sbjct: 61 TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
Query: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE
Sbjct: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
Query: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK
Sbjct: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
Query: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT
Sbjct: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
Query: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC
Sbjct: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
Query: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV
Sbjct: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
Query: 421 AKMT 424
AKMT
Sbjct: 421 AKMT 424
>gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 879 bits (2271), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF
Sbjct: 1 MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
Query: 61 TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE
Sbjct: 61 TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
Query: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE
Sbjct: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
Query: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK
Sbjct: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
Query: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT
Sbjct: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
Query: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC
Sbjct: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
Query: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV
Sbjct: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
Query: 421 AKMT 424
AKMT
Sbjct: 421 AKMT 424
>gi|239743067 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 877 bits (2267), Expect = 0.0
Identities = 423/424 (99%), Positives = 423/424 (99%)
Query: 1 MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF
Sbjct: 1 MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
Query: 61 TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE
Sbjct: 61 TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
Query: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTV SLIRGTVGCDSHAE
Sbjct: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVVSLIRGTVGCDSHAE 180
Query: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK
Sbjct: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
Query: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT
Sbjct: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
Query: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC
Sbjct: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
Query: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV
Sbjct: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
Query: 421 AKMT 424
AKMT
Sbjct: 421 AKMT 424
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 48.1 bits (113), Expect = 1e-05
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGRE--GRRKERKEGREGGREGGKKRGREEGRKG-GVKERK 256
E GE+EEG GE EG EG E G K +EG EG EG ++ G EG G G E +
Sbjct: 892 EGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEE 951
Query: 257 EGK-EGRREK 265
EG+ EG E+
Sbjct: 952 EGEWEGEEEE 961
Score = 47.0 bits (110), Expect = 3e-05
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 201 KGGEKEEGIGERGREGGK-EGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
+GGE EEG GER E + EG E + +E EG E G+ +G EEG +G +E E
Sbjct: 815 EGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEG 874
Query: 260 EGRREKRK 267
EG E+ +
Sbjct: 875 EGEGEEEE 882
Score = 46.6 bits (109), Expect = 4e-05
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 203 GEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGR 262
GE+EEG GE EG EG EG + +E EG EG ++ G EEG + G E + EG
Sbjct: 957 GEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEG--EGEEEEGEEEGEEEGEGEEEGEGEGE 1014
Query: 263 REK 265
E+
Sbjct: 1015 EEE 1017
Score = 45.4 bits (106), Expect = 1e-04
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 200 EKGGEKEEGIGERGREGGKEGRE----GRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
E GE+EEG GE EG EG E G +E EG EG E G+ +G EEG +G +
Sbjct: 875 EGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEG-EGEEEEGEGKGEEEGEEGEGEGE 933
Query: 256 KEGKEGRRE 264
+E EG E
Sbjct: 934 EEEGEGEGE 942
Score = 44.7 bits (104), Expect = 2e-04
Identities = 37/92 (40%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 180 EVALGRASRIFGLEYFPLHSEKG-GEKEEGIGE------RGREGGKEGREGRRKERKEGR 232
EV G+ R E E+G GE+EEG GE +G E G+EG E EG
Sbjct: 818 EVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEG- 876
Query: 233 EGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
EG E G+ G EEG G +E EG EG E
Sbjct: 877 EGEEEEGEGEGEEEGEGEGEEEEGEG-EGEEE 907
Score = 44.7 bits (104), Expect = 2e-04
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 200 EKGGEKEEGIGERGREG-GKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
E+ GE EEG GE EG G+E EG + EG EG EG ++ G EEG + ++ EG
Sbjct: 996 EEEGE-EEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEER--EKEGEG 1052
Query: 259 KEGRREKRK 267
+E RR + +
Sbjct: 1053 EENRRNREE 1061
Score = 43.9 bits (102), Expect = 3e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 200 EKGGEKEEGIGERGREGGKEG--REGRRKERKEGREGGREGGKKRGREEGRKG-GVKERK 256
E GE+EEG GE E G+E EG +E EG E G+ G EG +G G E +
Sbjct: 978 EGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEE 1037
Query: 257 EGKEGRREKRK 267
EG+E E+ K
Sbjct: 1038 EGEEEGEEREK 1048
Score = 43.5 bits (101), Expect = 4e-04
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 18/97 (18%)
Query: 200 EKGGEKEEGIGER--GREGGKEGREGRRKERKEGR--EGGRE------------GGKKRG 243
E+GGE+E G GE G +E +EG KE EG EG RE G +++G
Sbjct: 728 EEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKG 787
Query: 244 REEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKG 280
EEG +G +E E EGR E+++ G+ E+G
Sbjct: 788 EEEGDQGEGEE--EETEGRGEEKEEGGEVEGGEVEEG 822
Score = 42.0 bits (97), Expect = 0.001
Identities = 41/123 (33%), Positives = 56/123 (45%), Gaps = 33/123 (26%)
Query: 191 GLEYFPLHSEKGGEKEEGIGERGR--EGGKE-----------GREGRRKERKEGREGGR- 236
G E++ + GEK++G GE R EG KE G E +KER++G + R
Sbjct: 665 GAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERN 724
Query: 237 ----EGGKK-----------RGREEGRKGGVKERKEGK--EGRREKR--KLAIPSNFGKT 277
EGG++ R EE ++G KE EG+ EG REK + GK
Sbjct: 725 QEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKE 784
Query: 278 EKG 280
EKG
Sbjct: 785 EKG 787
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 200 EKGGEKEEGIG---ERGREG--GKEGREGRRK-ERKEGREGGREGGKKRGREEGRKGGVK 253
E GE+EEG G E G EG +EG EG + E +EG G E G+ G EE +G +
Sbjct: 846 EGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGE 905
Query: 254 ERKEGKEGRREK 265
E EG EG E+
Sbjct: 906 EEGEG-EGEEEE 916
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 203 GEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGR-----KGGVKERKE 257
GE EE GER +E G+ +E R + ++G E G +G + EGR +GG E E
Sbjct: 759 GEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGE 818
Query: 258 GKEGRREKRK 267
+EG+ E+ +
Sbjct: 819 VEEGKGEREE 828
Score = 40.8 bits (94), Expect = 0.002
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 200 EKGGEKEEGIGERGREGGKEGRE--GRRKERKEGR-EGGREGGKKRGREEGRKGGVKERK 256
E+ GE+ EG E G EG EG E G + +EG EG E G+ G EEG G +E
Sbjct: 859 EEEGEEGEG-EEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEG 917
Query: 257 EGK 259
EGK
Sbjct: 918 EGK 920
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRK-ERKEGR-EGGREGGKKRGREEGRKGGVKERKE 257
E+ GE+ EG GE EG EG +G + E +EG EG E G+ G EEG G + E
Sbjct: 922 EEEGEEGEGEGEE-EEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGE 980
Query: 258 GKEGRRE 264
G+E E
Sbjct: 981 GEEEEGE 987
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 200 EKGGEKEEGIGERGREGGK-EGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
E GE EEG GE E G+ EG E +E E G E G+ G EE +G V+ EG
Sbjct: 969 EGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEE-EEGEVEGEVEG 1027
Query: 259 KEGRRE 264
+EG E
Sbjct: 1028 EEGEGE 1033
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 200 EKGGEKEEGIGERGREGGKEGR-EGRRKERK-EGREGGREGGKKRG-----REEGRKGGV 252
E GE+EEG G +G E G+EG EG +E + EG +G EG ++ G EEG G
Sbjct: 909 EGEGEEEEGEG-KGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGE 967
Query: 253 KERK-EGKEGRRE 264
+E + EG+EG E
Sbjct: 968 EEGEGEGEEGEGE 980
Score = 39.7 bits (91), Expect = 0.005
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 200 EKGGEKEEGIGER--GREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKE 257
E+ GE+ EG GE G G+E EG +E +EG G E G+ G EE +G K +E
Sbjct: 868 EEEGEEGEGEGEEEEGEGEGEEEGEGEGEE-EEGEGEGEEEGEGEGEEEEGEG--KGEEE 924
Query: 258 GKEGRRE 264
G+EG E
Sbjct: 925 GEEGEGE 931
Score = 38.9 bits (89), Expect = 0.009
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKG-GVKERKEG 258
E GE+EEG GE G +G EG E + E EG EG ++ G EG +G G E +EG
Sbjct: 929 EGEGEEEEGEGE-GEDGEGEGEEEEGEWEGEEEEGEGEG-EEEGEGEGEEGEGEGEEEEG 986
Query: 259 K-EGRREK 265
+ EG E+
Sbjct: 987 EGEGEEEE 994
Score = 38.5 bits (88), Expect = 0.012
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 200 EKGGEKEEGIGERGREGGKEGR------EGRRKERKEGR--EGGREGGKKRGREEGRKGG 251
E+ E+ G E+G E G +G EGR +E++EG EGG K REE + G
Sbjct: 774 ERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEG 833
Query: 252 VKERKEGKEGRREKRKLAIPSNFGKTEK 279
E +EG EG E+ + GK E+
Sbjct: 834 EGEEEEG-EGEEEEGEGEEEEGEGKGEE 860
Score = 37.0 bits (84), Expect = 0.034
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 200 EKGGEKEEGIGERGREGGK-EGR------EGRRKERKEGREGGREGGKKRGREEG-RKGG 251
E GE E+G GE E G+ EG EG + EG EG EG ++ G EG + G
Sbjct: 936 EGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEG 995
Query: 252 VKERKEGKEGRRE 264
+E +E EG E
Sbjct: 996 EEEGEEEGEGEEE 1008
Score = 35.8 bits (81), Expect = 0.076
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 204 EKEEGIGERGREGGKEGR--------EGRRKERKEGREGGREGGKKRGRE-EGRKGGVKE 254
EKEEG ++ GKE + EG +E + E EGG+ G E E KG +E
Sbjct: 769 EKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREE 828
Query: 255 RKEGKEGRREKRKLAIPSNFGKTEKG 280
+E EG E+ + G+ E+G
Sbjct: 829 EEEEGEGEEEEGEGEEEEGEGEEEEG 854
Score = 35.4 bits (80), Expect = 0.099
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 201 KGGEKEEGIGERGREGGKEGREGRRK-ERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
+G E+EEG EG EG EG + E +EG E G E K+ EE R+ +E +E +
Sbjct: 1012 EGEEEEEG----EVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRN--REEEEEE 1065
Query: 260 EGRREK 265
EG+ ++
Sbjct: 1066 EGKYQE 1071
Score = 32.7 bits (73), Expect = 0.64
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRR 263
E EEG GE E G+E EG +E KEG G E + R EE +G +E E + R+
Sbjct: 1026 EGEEGEGEGEEEEGEE--EGEERE-KEGE--GEENRRNREEEEEEEGKYQETGEEENERQ 1080
Query: 264 E 264
+
Sbjct: 1081 D 1081
Score = 32.3 bits (72), Expect = 0.84
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 197 LHSEKGGEKEEGIGERGREGGKEGREGRRK-ERKEGREGGREGGKKRGREEGRKGGVKER 255
+ E GE+ EG GE EG +EG E ++ E +E R E ++ G+ + ER
Sbjct: 1021 VEGEVEGEEGEGEGEE-EEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENER 1079
Query: 256 KEGKEGRR 263
++G+E ++
Sbjct: 1080 QDGEEYKK 1087
Score = 32.3 bits (72), Expect = 0.84
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 200 EKGGEKEEGIGE-RGREGGKEGREGRRKERKEGREGGR---EGGKKRGREEGR------- 248
E GE+EEG E RE EG E RR +E E G+ G ++ R++G
Sbjct: 1031 EGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKKVSK 1090
Query: 249 -KGGVKERKEGKEGRREKRKLAIPSNFGKTEK 279
KG V K GK +K+ + GK ++
Sbjct: 1091 IKGSV---KYGKHKTYQKKSVTNTQGNGKEQR 1119
Score = 29.3 bits (64), Expect = 7.1
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 179 AEVALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRR----KERKEG-RE 233
AEV+ G+A + GE E+G RG +EG G +ER++G ++
Sbjct: 634 AEVSEGKAKSV-------------GEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKD 680
Query: 234 GGR-------EGGKKRGREE---GRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKG 280
GR EG K+ +E R G +E+KE ++G +++R + G+ E G
Sbjct: 681 KGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEG-GEEEHG 736
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 45.8 bits (107), Expect = 7e-05
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 205 KEEGIGERGREGGKEGREGRRKERKEGREGGREGGKK-----RGREEGRKGGVKERKEGK 259
++EG ER E KE RE +++R+ +E RE GKK R +EE + + KE K
Sbjct: 48 RKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENK 107
Query: 260 EG-RREKRKLAIPSNFGKTEK 279
EG +EKRK G+T K
Sbjct: 108 EGEEKEKRKKKEKKERGRTSK 128
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRR 263
E+E I R +EG KE R+KER+E + RE K+R RE G+K ERK+ + R+
Sbjct: 40 EREREIETR-KEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERK 98
Query: 264 EKRK 267
++R+
Sbjct: 99 KRRR 102
Score = 44.3 bits (103), Expect = 2e-04
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKER---KEGREGGR--EGGKKRGREEGRKGGVKE 254
+KG K+E + R KE +EG KE+ KE +E GR + GK+R R+E RK ++
Sbjct: 86 KKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERK 145
Query: 255 RKEGKEGRREKRK 267
+E K+ REK +
Sbjct: 146 ERERKKEEREKER 158
Score = 43.9 bits (102), Expect = 3e-04
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
+++G EKE+ + +E G+ +EG+ +ERKE R+ RE K+R R++ + +ERKE
Sbjct: 106 NKEGEEKEKRKKKEKKERGRTSKEGKERERKEERK--REERKERERKKEEREKERERKER 163
Query: 259 KEGRREK 265
K+ R++
Sbjct: 164 KKRERKQ 170
Score = 42.4 bits (98), Expect = 8e-04
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 200 EKGGEKEEGIGERGREGGKEGREG-RRKERKEGREGGREGGKKRGREEGRKGGVKERKE- 257
E+ K E ER RE GK+ ++G R+KE +E ++ RE K G EE K KE+KE
Sbjct: 65 EREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEG-EEKEKRKKKEKKER 123
Query: 258 ---GKEGRREKRK 267
KEG+ +RK
Sbjct: 124 GRTSKEGKERERK 136
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGV----KER 255
EK ++E G E+ E KE RE +++ R++ + G E K++ +E+ +G KER
Sbjct: 74 EKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKER 133
Query: 256 KEGKEGRREKRK 267
+ +E +RE+RK
Sbjct: 134 ERKEERKREERK 145
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKE--GREGGREGGKKRGREEGRKGGVKERKE 257
EK E++E ++ G++ E + KERKE RE R+ KK + R+ KERK+
Sbjct: 155 EKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKK 214
Query: 258 GKEGRREKRKLAIPSNFGKTEKG 280
KE R+++R+ +N+ + E+G
Sbjct: 215 -KEERKKERQKDRQTNWREKERG 236
Score = 40.4 bits (93), Expect = 0.003
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 203 GEKEEGIGERGREGGKEGREGRR-----KERKEGREGGREGGKK----RGREEGRKGGVK 253
GEKEE E+ R+ K+ R+ +ERKE RE +E KK + R++ R+ +
Sbjct: 172 GEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWR 231
Query: 254 ERKEGKEGRREKRK 267
E++ GK R+E++K
Sbjct: 232 EKERGKRERKERKK 245
Score = 38.1 bits (87), Expect = 0.015
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKE------------RKEGREGGREGGKKRGREEG 247
EK K++ ERGR KEG+E RKE +KE RE RE K+R + E
Sbjct: 111 EKEKRKKKEKKERGRTS-KEGKERERKEERKREERKERERKKEEREKERE-RKERKKRER 168
Query: 248 RKGGVKERKEGKEGRREKRK 267
++ G KE + ++ R+E++K
Sbjct: 169 KQVGEKEEERKEKERKERKK 188
Score = 37.4 bits (85), Expect = 0.026
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERK-------EGREGGREGGKKRGREEGRKGGV 252
E+ E+E ER +E +E +E +++ERK E +E R+ KKR R +
Sbjct: 142 EERKERERKKEEREKE--RERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKE 199
Query: 253 KERKEGKEGRREKRK 267
+ERKE +E ++E++K
Sbjct: 200 RERKERRERKKERKK 214
Score = 36.6 bits (83), Expect = 0.044
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 204 EKEEGIGERGREGGKEGREGRRKER-KEGREGGREGGKKRGREEGRKGGVKERKEGKEGR 262
E+E + G++ + R+ R+ER K RE +E ++RG++E + KE +E K+ R
Sbjct: 42 EREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRR 101
Query: 263 REK 265
REK
Sbjct: 102 REK 104
Score = 34.7 bits (78), Expect = 0.17
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGRE------------GGREGGKKRGREE 246
+ K G++ E ER RE KE RE +++ER++ RE G +E +K +
Sbjct: 126 TSKEGKERERKEERKREERKE-RERKKEEREKERERKERKKRERKQVGEKEEERKEKERK 184
Query: 247 GRKGGVKERKEGKEGRREKRK 267
RK + RKE K+ R K +
Sbjct: 185 ERKKRERNRKERKKERERKER 205
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 45.1 bits (105), Expect = 1e-04
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 201 KGGEKEEGIGERGREGGKEGREGR-RKERKEGRE---GGREGGKKRGREEGRKGGVKERK 256
K GE +G GE G+E G++ +E RKE +G+E G +G KK G++ K KER+
Sbjct: 177 KKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKERE 236
Query: 257 EGKE 260
+GKE
Sbjct: 237 DGKE 240
Score = 44.7 bits (104), Expect = 2e-04
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 198 HSEKGGEKEEGIGERGREGGKEGREGRRK-----ERKEGREG-----GREGGKKRGREEG 247
+ EKG +E E+G E GKE + G K E+++G++G E GK++G +E
Sbjct: 138 NEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEK 197
Query: 248 RKGGVKERKEGKEGRREKRK 267
+ KE +GKE K K
Sbjct: 198 EEEDRKETGDGKENEDGKEK 217
Score = 43.1 bits (100), Expect = 5e-04
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGR--KGG----- 251
+EKGGEK+E + + ++ +E + +E E G+E ++G E+G+ K G
Sbjct: 109 TEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGE 168
Query: 252 -VKERKEGKEGRREKRKLAIPSNFGKTEK 279
KE+++GK+G K G+ EK
Sbjct: 169 DAKEKEDGKKGEDGKGNGEDGKEKGEDEK 197
Score = 39.7 bits (91), Expect = 0.005
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 200 EKGGE--KEEGIGERGREGGKEGREGRRKERKEGR-EGGREGGKKRGREEGRK--GGVKE 254
EKG E KE+ G E KE +G++ E +G E G+E G+ EE RK G KE
Sbjct: 151 EKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKE 210
Query: 255 RKEGKE--GRREKRKLAIPSNFGKTEKG 280
++GKE ++E + + + + + E G
Sbjct: 211 NEDGKEKGDKKEGKDVKVKEDEKEREDG 238
Score = 35.4 bits (80), Expect = 0.099
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRK-ERKEGR-------EGGREGGKK-RGREEGRKG 250
EKG +++E + GKE +G+ K ++KEG+ E RE GK+ G E G
Sbjct: 191 EKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAG 250
Query: 251 GVKERKEGKEGRREKRKLAIPSNFGKTEK 279
KE+++ KE K + I + GK E+
Sbjct: 251 --KEKEDLKEEEEGKEEDEIKEDDGKKEE 277
Score = 29.3 bits (64), Expect = 7.1
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 205 KEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
KEE I + +GG E +E E K E +E + + E+G G + ++G+E +E
Sbjct: 101 KEENIEDATEKGG-EKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKE 159
Query: 265 KR 266
+
Sbjct: 160 DK 161
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 43.9 bits (102), Expect = 3e-04
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Query: 211 ERGREGGKEGRE--GRRKERKEGREGGREGGKKRGREEGRKGGVKER-KEGKEGRREKRK 267
ER RE +EG RR+ER+ R+ G+E ++R R+E RK KER KE K+ R+EK+K
Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERK---KERKKERKKERKEKKK 272
Score = 35.8 bits (81), Expect = 0.076
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGRE---EGRKGGVKERKEGKE 260
EK+ I ER RE +E ++GR +ER GRE R+ +++ RE E + G +E + +E
Sbjct: 116 EKQTEI-ERDRE--REKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERE 172
Query: 261 GRREKRK 267
RE+ K
Sbjct: 173 RDREREK 179
Score = 34.7 bits (78), Expect = 0.17
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK--KRGRE-EGRKGGVKERK 256
E+ +E+ ER R+ K RE RRKE++ R RE +R RE E +KG +ER
Sbjct: 80 ERDRVREKTEKERDRDR-KRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERD 138
Query: 257 EGKEGRREK 265
G+E R++
Sbjct: 139 RGRERERDR 147
Score = 32.0 bits (71), Expect = 1.1
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 198 HSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKE 257
H + G+ + +R RE ++ R+ RK +E R +E + R RE+ + +E
Sbjct: 69 HKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDRERE 128
Query: 258 GKEGRREKR 266
++GR +R
Sbjct: 129 KQKGRERER 137
Score = 31.6 bits (70), Expect = 1.4
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ E+E+ ++GRE +E GR +ER RE RE ++ R +G++ ER+ +
Sbjct: 122 ERDREREK---QKGRE--RERDRGRERERDRDREKERERQTEKDR-DGQRETETERERDR 175
Query: 260 EGRREKRK 267
E ++K +
Sbjct: 176 EREKQKER 183
Score = 31.6 bits (70), Expect = 1.4
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
+KG E+E +RGRE +E R KER+ E R+G ++ E R +ER++ K
Sbjct: 130 QKGRERER---DRGRE--RERDRDREKERERQTEKDRDGQRETETERERD---REREKQK 181
Query: 260 EGRREK 265
E E+
Sbjct: 182 ERETER 187
Score = 31.2 bits (69), Expect = 1.9
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 207 EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK--EGRRE 264
EG E R ++ R KER RE R+ +K+ R++ RK KERKE K E RRE
Sbjct: 224 EGERETDRRRERQRDRDRGKER--DRERDRKEERKKERKKERK---KERKEKKKEEKRRE 278
Query: 265 KRK 267
+K
Sbjct: 279 DKK 281
Score = 30.0 bits (66), Expect = 4.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 208 GIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
G+G+ ++ + R+ R +E E R+ +KR RE RK R +E + E
Sbjct: 64 GLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTE 120
Score = 29.6 bits (65), Expect = 5.4
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 211 ERGREGGKEG--REGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
+R R+ GKE R++ERK+ R+ R+ +K ++E ++ K+RK G+
Sbjct: 236 QRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRKWGE 286
Score = 28.9 bits (63), Expect = 9.2
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ +++E R RE E R +E+++GRE R RGRE R ++R++ +
Sbjct: 101 ERRRKEKETNRNRDREKQTEIERDREREKQKGRERER----DRGRERERD---RDREKER 153
Query: 260 EGRREK 265
E + EK
Sbjct: 154 ERQTEK 159
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 43.9 bits (102), Expect = 3e-04
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER-KE 257
+ KGG + + ER R+ +E + R +ER+ RE RE ++R R R+ KER KE
Sbjct: 115 NRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKE 174
Query: 258 GKEGRREKRK 267
K+ R+EK+K
Sbjct: 175 RKKERKEKKK 184
Score = 36.2 bits (82), Expect = 0.058
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGV-------KERKEGKEGRR 263
ER R+GG+E + +ER RE R+ ++R R+ RK ER+E K+ R+
Sbjct: 113 ERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERK 172
Query: 264 EKRK 267
++RK
Sbjct: 173 KERK 176
Score = 35.0 bits (79), Expect = 0.13
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
ER ++ +E + + R+ R+GGRE K+ RE R+ + ++E + R+ +RK
Sbjct: 95 ERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERK 151
Score = 33.5 bits (75), Expect = 0.38
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
ER R+ +E + R +ERK + RE +K GRE ++ ER+ +E R++++
Sbjct: 87 ERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQ---TERERDRERERQRQR 140
Score = 32.3 bits (72), Expect = 0.84
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
+R R+ +E + +ER + R+ R+ R RE RKGG +ER + E R++ +
Sbjct: 79 QRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGG-RERDKQTERERDRER 134
Score = 31.6 bits (70), Expect = 1.4
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
+R RE +E R + RK GRE ++ ++R RE R+ + +E + R KR+
Sbjct: 99 DRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR--QRERERQRQRERKRE 153
Score = 30.8 bits (68), Expect = 2.4
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 214 REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKLAIPSN 273
RE +E ++ R ++R+ RE RE ++R R+ R+ + +E + R +RK N
Sbjct: 52 REKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRN 111
Query: 274 FGKTEKG 280
+ KG
Sbjct: 112 RERNRKG 118
Score = 29.3 bits (64), Expect = 7.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE--RKEGKEGRREKRK 267
ER RE +E G+ ER+ R+ RE +R ++ +E R+ +E RE++K
Sbjct: 2 ERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQK 60
Score = 28.9 bits (63), Expect = 9.2
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E E+E +R R ++ + R KER+ +E R+ ++R RE R+ ER+ +
Sbjct: 28 ENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQ--RQRERETERE---TERQRER 82
Query: 260 EGRREKRK 267
+ +RE+++
Sbjct: 83 QRQRERKR 90
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 43.9 bits (102), Expect = 3e-04
Identities = 60/224 (26%), Positives = 89/224 (39%), Gaps = 46/224 (20%)
Query: 70 MSLKQKCHDVVSKTREQQTYLESAHPQPKTSQ-------------------HSPWHVKPH 110
++L++ H VV + + YL S P T + P ++ PH
Sbjct: 95 LNLQRPVHHVVPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPH 154
Query: 111 PH---GCREQSSECTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVAS 167
P R S C + L F IP S P H + A+ S
Sbjct: 155 PFPHPAFRMDDSYCLSA-------LRSPFYPIPTPGSLPPLHPS---------AMHLHLS 198
Query: 168 LIRGTVGCDSHAEVALGRASRIFGL--EYFPLHSEKGGEKEEGIGERGREGGKEGREGRR 225
+R SH+ +A + R+ GL E + E E+E ER RE +E R
Sbjct: 199 GVRYPPEL-SHSSLAALHSERMSGLSAERLQMDEELRRERER---EREREREREADRERE 254
Query: 226 KERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKLA 269
KER+ RE RE K+R RE+ R+ ++ ++E + REK LA
Sbjct: 255 KEREREREKEREQEKEREREKERERELERQRE--QRAREKELLA 296
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 43.9 bits (102), Expect = 3e-04
Identities = 60/224 (26%), Positives = 89/224 (39%), Gaps = 46/224 (20%)
Query: 70 MSLKQKCHDVVSKTREQQTYLESAHPQPKTSQ-------------------HSPWHVKPH 110
++L++ H VV + + YL S P T + P ++ PH
Sbjct: 199 LNLQRPVHHVVPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPH 258
Query: 111 PH---GCREQSSECTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVAS 167
P R S C + L F IP S P H + A+ S
Sbjct: 259 PFPHPAFRMDDSYCLSA-------LRSPFYPIPTPGSLPPLHPS---------AMHLHLS 302
Query: 168 LIRGTVGCDSHAEVALGRASRIFGL--EYFPLHSEKGGEKEEGIGERGREGGKEGREGRR 225
+R SH+ +A + R+ GL E + E E+E ER RE +E R
Sbjct: 303 GVRYPPEL-SHSSLAALHSERMSGLSAERLQMDEELRRERER---EREREREREADRERE 358
Query: 226 KERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKLA 269
KER+ RE RE K+R RE+ R+ ++ ++E + REK LA
Sbjct: 359 KEREREREKEREQEKEREREKERERELERQRE--QRAREKELLA 400
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 42.4 bits (98), Expect = 8e-04
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ EKE ER RE + RE R +ER+ RE RE ++R +E R+ +++ +G+
Sbjct: 742 ERDREKER---EREREERERERE-RERERERERERERERARERDKERERQRDWEDKDKGR 797
Query: 260 EGRREKRK 267
+ RREKR+
Sbjct: 798 DDRREKRE 805
Score = 38.1 bits (87), Expect = 0.015
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
EK E+E ER RE +E R +ER+ RE +E ++R E+ KG +R+E +
Sbjct: 746 EKEREREREERERERERERERERERERERERARERDKERERQRDWEDKDKGR-DDRREKR 804
Query: 260 EGRREKR 266
E RE R
Sbjct: 805 EEIREDR 811
Score = 37.7 bits (86), Expect = 0.020
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGR-KGGVKERKEG 258
E+ E+E ER RE +E + R ER+ RE RE K+R RE R + +ER+
Sbjct: 684 ERDRERER---ERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERE 740
Query: 259 KEGRREKRK 267
+E REK +
Sbjct: 741 RERDREKER 749
Score = 37.0 bits (84), Expect = 0.034
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 197 LHSEKGGEKE-EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
L E+ E+E E ER RE ++ R +ER+ RE RE ++R REE + +ER
Sbjct: 707 LERERAREREREREKERDRERDRDRDHDRERERE--RERDREKEREREREERERERERER 764
Query: 256 KEGKEGRREKRK 267
+ +E RE+ +
Sbjct: 765 ERERERERERER 776
Score = 35.8 bits (81), Expect = 0.076
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 200 EKGGEKE-EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
EK E E E ER RE KE R ++R RE RE + R +E R+ +ER+
Sbjct: 702 EKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERE 761
Query: 259 KEGRREKRK 267
+E RE+ +
Sbjct: 762 RERERERER 770
Score = 34.7 bits (78), Expect = 0.17
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREK 265
ER RE +E R +ER+ RE RE K+R E R +ER+ KE RE+
Sbjct: 674 ERARERDRERERDRERERERERERDREREKERELERER-AREREREREKERDRER 727
Score = 32.0 bits (71), Expect = 1.1
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ E+++ ER R+ E ++ R +R+E RE RE R + RK + R EG
Sbjct: 775 ERARERDK---ERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNEGS 831
Query: 260 EGRREKRK 267
R+ K
Sbjct: 832 PSPRQSPK 839
Score = 31.6 bits (70), Expect = 1.4
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ +EE +R + E R +ER+ RE RE ++R RE ++ + ER+ +
Sbjct: 655 ERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKEREL-ERERAR 713
Query: 260 EGRREKRK 267
E RE+ K
Sbjct: 714 EREREREK 721
Score = 29.3 bits (64), Expect = 7.1
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
EK ++E +R R+ +E R ++R++ RE RE ++R RE R+ +ER+ +
Sbjct: 720 EKERDRER---DRDRDHDRERERERERDREKERERERE-ERERERERERE-RERERERER 774
Query: 260 EGRREKRK 267
E RE+ K
Sbjct: 775 ERARERDK 782
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 42.0 bits (97), Expect = 0.001
Identities = 21/63 (33%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 208 GIGERG-REGGKEGREGRR--KERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
G+ E G +E +EG+EG+ KE+K+ ++ G+E +K +++ + K+++EGKE RR
Sbjct: 631 GLEEAGPKESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKEERRR 690
Query: 265 KRK 267
+++
Sbjct: 691 RQQ 693
Score = 31.2 bits (69), Expect = 1.9
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 193 EYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKR---------- 242
+ F L E+ G KE E G+EG +E ++K++K+G+E + KK+
Sbjct: 626 DLFGLGLEEAGPKESS--EEGKEGKTPSKE-KKKKKKKGKEEEEKAAKKKSKHKKSKDKE 682
Query: 243 -GREEGRK 249
G+EE R+
Sbjct: 683 EGKEERRR 690
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 40.8 bits (94), Expect = 0.002
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 10/72 (13%)
Query: 200 EKGGEKEEGIGERG----REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
EK ++E G E+ RE GKE RE +RKER++ R+ RE +++ ++E +K +ER
Sbjct: 51 EKERKRERGKKEKKKRKKRERGKE-RERKRKEREKQRKERREKERRKRKKEKKK---RER 106
Query: 256 KEGKEGRREKRK 267
K+ GRRE++K
Sbjct: 107 KQ--RGRRERKK 116
Score = 40.8 bits (94), Expect = 0.002
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEG--REGGREGGKKRGREEGRKGGVKERKE 257
E+G E+E ER ++ + + RRK +KE RE + G ++R +++ RK +E K+
Sbjct: 70 ERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQ 129
Query: 258 GKEGRREKRK 267
+E +R+KR+
Sbjct: 130 RRERKRKKRR 139
Score = 40.0 bits (92), Expect = 0.004
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKK-----------RGREEGRKGGVKERKEGK 259
+R E KE RE +++R+ +E RE GKK + RE RK K+RKE +
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERR 90
Query: 260 EGRREKRK 267
E R KRK
Sbjct: 91 EKERRKRK 98
Score = 40.0 bits (92), Expect = 0.004
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ EKE G ER R+ K +E R K+R+ R+ ++ +++ R E +K KER++ K
Sbjct: 146 ERKREKERGKRERKRK--KRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKK 203
Query: 260 EGRREKR 266
E +++++
Sbjct: 204 ERKKDRK 210
Score = 39.7 bits (91), Expect = 0.005
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGG-----REGGKKRGREEGRKGGVKE 254
E+ + E R R+ K ++ RRKERK +E G R+ KK RE+ R+ KE
Sbjct: 119 ERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE 178
Query: 255 RKEGKE--GRREKRK 267
RK+ +E RRE++K
Sbjct: 179 RKKERERKERRERKK 193
Score = 38.9 bits (89), Expect = 0.009
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERK-EGREGGREGGKKRGREEGRKGGVKERKEGK 259
K K++ ER RE + RE +RK+RK E RE RE +K ++E + +ERK K
Sbjct: 136 KKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERK--K 193
Query: 260 EGRREKRKLAIPSNFGKTEK 279
E ++E+RK KT++
Sbjct: 194 ERKKERRKKKERKKDRKTDR 213
Score = 37.4 bits (85), Expect = 0.026
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
EK + + G R R+ KE +E R +E K+ RE R KKR +++ RK +E++ GK
Sbjct: 100 EKKKRERKQRGRRERKKKKERKE-RERENKQRRERKR---KKRRKKKRRKERKREKERGK 155
Query: 260 -EGRREKRK 267
E +R+KRK
Sbjct: 156 RERKRKKRK 164
Score = 37.4 bits (85), Expect = 0.026
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRR 263
+K++ ER RE + R+K RK+ R R+ K+RG+ E ++ K +KE +E +R
Sbjct: 115 KKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKR--KKRKKEEREKKR 172
Query: 264 EKRK 267
E+ +
Sbjct: 173 ERNR 176
Score = 37.0 bits (84), Expect = 0.034
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 203 GEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGR 262
G +E + +E +E ++ R ++RK+ R+ R +KR +E G++ ++RK+ K+
Sbjct: 110 GRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKR--ERKRKKRKKEE 167
Query: 263 REKRK 267
REK++
Sbjct: 168 REKKR 172
Score = 35.8 bits (81), Expect = 0.076
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK---- 259
+KE+ ER + G +E RK++KE +E RE ++R R+ ++ K RKE K
Sbjct: 98 KKEKKKRERKQRGRRE-----RKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKE 152
Query: 260 EGRREKRK 267
G+RE+++
Sbjct: 153 RGKRERKR 160
Score = 34.7 bits (78), Expect = 0.17
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGG------KKRGREEGRKGGVK 253
+K E++E E + ++ ++ R+K+R++ R+ +E G KKR +EE K +
Sbjct: 115 KKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRER 174
Query: 254 ERKEGKEGRREKRK 267
RKE K+ R K +
Sbjct: 175 NRKERKKERERKER 188
Score = 34.3 bits (77), Expect = 0.22
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 185 RASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGR 244
R R G E E+ +++E + R+ KE ++ RK+R G RE KK+ R
Sbjct: 66 RKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQR-----GRRERKKKKER 120
Query: 245 EEGRKGGVKERKEGKEGRREKRK 267
+E R+ K+R+E K +R K+K
Sbjct: 121 KE-RERENKQRRERKRKKRRKKK 142
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 40.8 bits (94), Expect = 0.002
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKR 266
E+ R+G +E + R +E+ E GRE G++R +++GR+ + + + + GR+ KR
Sbjct: 405 EKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKR 460
Score = 38.1 bits (87), Expect = 0.015
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 200 EKGGEKE-EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGRE-EGRKGGVKERKE 257
+K E+E E GERGR+ +G+ R ++R +E R+ ++R R+ E + +ER++
Sbjct: 124 QKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREK 183
Query: 258 GKEGRREKRKLAIPSNFGKTE 278
++ RRE+ + N KTE
Sbjct: 184 NRQERRERERQREKEN--KTE 202
Score = 37.0 bits (84), Expect = 0.034
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREK 265
ER R+ G+EGR R+ ER+ RE R+ R REE + ++R++ +E + EK
Sbjct: 354 ERNRQTGREGR--RQAERERERERERDRQSAREREERERDRDRDRQKERERQTEK 406
Score = 36.2 bits (82), Expect = 0.058
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKLA 269
ER RE +E R KER+ R+ E ++R R+ GR+G + +E + R R+ A
Sbjct: 324 ERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSA 382
Score = 35.4 bits (80), Expect = 0.099
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ E+E +R RE +E R++E + RE RE +KR E R+ + R+ G+
Sbjct: 306 ERERERERN-RKRERERERERERERQRETERDREKERERKRKRQTEMDRE---RNRQTGR 361
Query: 260 EGRREKRK 267
EGRR+ +
Sbjct: 362 EGRRQAER 369
Score = 35.0 bits (79), Expect = 0.13
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
ER R+ ++ ++ R ++ ++ R+G RE K+R RE+ R E + G+E RE+ K
Sbjct: 387 ERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDR-----ESERGRERGREREK 438
Score = 34.3 bits (77), Expect = 0.22
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ E+E ER RE ++ + R ++RK E RE ++ GR EGR+ +ER+ +
Sbjct: 320 ERERERER---ERQRETERDREKERERKRKRQTEMDRERNRQTGR-EGRRQAERERERER 375
Query: 260 EGRREKRK 267
E R+ +
Sbjct: 376 ERDRQSAR 383
Score = 34.3 bits (77), Expect = 0.22
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGRE-GGKKRGREEGR-KGGVKERKEGKEGRREKRKL 268
+ GREG ++ R +ER+ R+ RE ++R R+ R K ++ ++ ++G+RE K
Sbjct: 358 QTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQ 417
Query: 269 AIPSNFGKTEKG 280
++E+G
Sbjct: 418 REREKDRESERG 429
Score = 33.9 bits (76), Expect = 0.29
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
EK + E+ ERGRE +E ERK + R+ +K RE K +ER +
Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERER-EKQAERERASER 254
Query: 260 EGRREKRK 267
E R+K +
Sbjct: 255 ETERDKER 262
Score = 33.9 bits (76), Expect = 0.29
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
+R R ++ R++ER+ RE RE +KR RE R+ +ER+ +E R++ K
Sbjct: 286 KRQRRTERDRETERKRERQRERERERERNRKRERERERE---RERERQRETERDREK 339
Score = 33.9 bits (76), Expect = 0.29
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 21/86 (24%)
Query: 199 SEKGGEKEEGIGERGREGGKEGRE-------GRRKER----KEGREGGREGGKKRGREEG 247
+E+ E+E ER R+ +E E R+KER ++ R+G RE K+R RE+
Sbjct: 367 AERERERER---ERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKD 423
Query: 248 R-------KGGVKERKEGKEGRREKR 266
R +G +E+++G+E RE++
Sbjct: 424 RESERGRERGREREKQKGRERDRERQ 449
Score = 33.5 bits (75), Expect = 0.38
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
ER RE + + R +ER+ RE RE R R+ R+ KER KE RE +
Sbjct: 80 ERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQRE---KERNRQKERERETER 133
Score = 33.1 bits (74), Expect = 0.49
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
ER RE ++ R +ER+ R RE ++R RE R+ + +E + R+ KR+
Sbjct: 292 ERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQ 348
Score = 32.7 bits (73), Expect = 0.64
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 200 EKGGEKE-EGIGERGREGGKE-GREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKE 257
E+ E+E E ER RE ++ R+ R+KER+ + R+ +R RE RK +ER+
Sbjct: 249 ERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERK---RERQR 305
Query: 258 GKEGRREKRK 267
+E RE+ +
Sbjct: 306 ERERERERNR 315
Score = 32.0 bits (71), Expect = 1.1
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 198 HSEKGGEKE---EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE 254
H E+ ++E E +R R+ +E R+KER+ RE REG +RGR+ + G +E
Sbjct: 94 HRERQRDREKERERQTDRERDRQREKERNRQKERE--RETEREG--ERGRDR-QTDGQRE 148
Query: 255 RKEGKEGRREKRKLAIPSNFGKTEK 279
R+ ++ +E+ + +TE+
Sbjct: 149 RERQRDAEKERERQTDRERQRQTER 173
Score = 32.0 bits (71), Expect = 1.1
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 211 ERGREGGKEGREGRRKE--RKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
ER RE +E + R+ E R+ R+ GREG ++ RE R ER+ ++ RE+ +
Sbjct: 334 ERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERER-----ERERDRQSAREREE 387
Score = 31.6 bits (70), Expect = 1.4
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 198 HSEKGGEKE-----EGIGERGREGGKEGREGRRKERKEGREGGREGG--------KKRGR 244
HSE+G E+E E ER R+ +E R+ ER+ ++ RE K+R R
Sbjct: 205 HSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERER 264
Query: 245 EEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEK 279
E R R++ +E + ++++ +TE+
Sbjct: 265 ERDRDRDRDRRQKERERQTDRKRQRRTERDRETER 299
Score = 29.6 bits (65), Expect = 5.4
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 12/82 (14%)
Query: 198 HSEKGGEKEEGIGERGREGGKEGREG---------RRKERKEGREGGREGGKKRGREEGR 248
H + G+ E ++ RE +E R+ RR+E+ R+ R ++R RE+ R
Sbjct: 46 HKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKER 105
Query: 249 KGGV---KERKEGKEGRREKRK 267
+ ++R+ KE R+K +
Sbjct: 106 ERQTDRERDRQREKERNRQKER 127
Score = 29.6 bits (65), Expect = 5.4
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 200 EKGGEKE-EGIGERGR----EGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE 254
E+G +++ +G ER R E +E + R ++R+ R +E +++ R+E R+ +E
Sbjct: 136 ERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRE---RE 192
Query: 255 RKEGKEGRREKR 266
R+ KE + E R
Sbjct: 193 RQREKENKTEDR 204
Score = 29.3 bits (64), Expect = 7.1
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 9/52 (17%)
Query: 199 SEKGGEKEEGI-GERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRK 249
+EK E+E+ ERGRE G+E +E+++GRE RE ++ R+ GR+
Sbjct: 414 TEKQREREKDRESERGRERGRE------REKQKGRERDRE--RQTDRQAGRQ 457
Score = 28.9 bits (63), Expect = 9.2
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERKE--GREGGREGGKKRGREEGR-----KGGVK 253
K + E R R+ +E + R KER+ RE R+ K+R R++ R + G +
Sbjct: 78 KRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGER 137
Query: 254 ERKEGKEGRREKRK 267
R +G+RE+ +
Sbjct: 138 GRDRQTDGQRERER 151
Score = 28.9 bits (63), Expect = 9.2
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ E++ R+ +E + R+++R+ R+ E ++R RE R+ +ER +
Sbjct: 261 ERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERE---RERNRKR 317
Query: 260 EGRREKRK 267
E RE+ +
Sbjct: 318 ERERERER 325
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 211 ERGREGGKEGREGRR------KERKEGREGGREGGKKRGREEGRKGGVKER--KEGKEGR 262
+R RE KE GRR KER RE RE ++R +E+ +G V+E+ KE K+ R
Sbjct: 351 DRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDR 410
Query: 263 REK 265
R +
Sbjct: 411 RHR 413
Score = 31.2 bits (69), Expect = 1.9
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+G E+E+ ER RE KE R E K+ +E + R + ++ KE+K +
Sbjct: 373 ERGNEREKE-RERSRERSKEQRSRGEVEEKKHKEDKDD----RRHRDDKRDSKKEKKHSR 427
Query: 260 EGRREK--RKLAIPSNFGKTEKGFS 282
RE+ R + N GK + S
Sbjct: 428 SRSRERKHRSRSRSRNAGKRSRSRS 452
Score = 29.6 bits (65), Expect = 5.4
Identities = 35/122 (28%), Positives = 43/122 (35%), Gaps = 26/122 (21%)
Query: 171 GTVGCDSHAEVALGRASR-IFGLEYFPLHSEKGGEKEEGIG--------ERGREGGKEGR 221
G D H E R+ R P S EG G ER +E + R
Sbjct: 247 GAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLER 306
Query: 222 EG--RRKERKEG----------REGGREGGKKRGREEGRKGGVKER-----KEGKEGRRE 264
E R KER+ R RE + R R RKG ++R KE + GRR
Sbjct: 307 EAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRR 366
Query: 265 KR 266
R
Sbjct: 367 DR 368
Score = 28.9 bits (63), Expect = 9.2
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 212 RGREGGKEG-REGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKR 266
R R ++G R R +ER++ E GR + +E G + KER+ +E +E+R
Sbjct: 339 RSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNE-REKERERSRERSKEQR 393
Score = 28.9 bits (63), Expect = 9.2
Identities = 17/82 (20%), Positives = 29/82 (35%)
Query: 198 HSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKE 257
H E ++ +R + K+ R +ERK KR R ++ K + E
Sbjct: 403 HKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNE 462
Query: 258 GKEGRREKRKLAIPSNFGKTEK 279
KE ++ + EK
Sbjct: 463 SKEKSNKRSRSGSQGRTDSVEK 484
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 39.7 bits (91), Expect = 0.005
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKL 268
ER RE +E R +ER+ RE RE ++R RE+ +K ++R+E +E E+RKL
Sbjct: 392 EREREREREREREREREREREREREREREREREREKDKK---RDREEDEEDAYERRKL 446
Score = 37.7 bits (86), Expect = 0.020
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ E+E ER RE +E R +ER+ RE RE KKR REE + + RK +
Sbjct: 392 ERERERER---EREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLER 448
Query: 260 EGRREK 265
+ R ++
Sbjct: 449 KLREKE 454
Score = 34.3 bits (77), Expect = 0.22
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 207 EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKR 266
E +R ++ + + R +ER+ RE RE ++R RE R+ +ER+ +E REK
Sbjct: 372 ERSSDRNKDRSRSREKSRDRERERERERERERERERERERERE---REREREREREREKD 428
Query: 267 K 267
K
Sbjct: 429 K 429
Score = 32.7 bits (73), Expect = 0.64
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ E+E ER RE +E + + +ER+ R+ R+ K+R R+ R+ +E
Sbjct: 315 ERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERS 374
Query: 260 EGRREKR 266
R + R
Sbjct: 375 SDRNKDR 381
Score = 32.3 bits (72), Expect = 0.84
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRR 263
E+E+G E+ R+ ++ R R +ER+ RE RE ++R RE +ER++ KE R
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERE-RRERERERERE-------REREKEKERER 343
Query: 264 EKRK 267
E+ +
Sbjct: 344 ERER 347
Score = 30.4 bits (67), Expect = 3.2
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E+ E+E ER RE +E + KER+ RE R+ + + R+ R +R+ +
Sbjct: 313 ERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDR-----DRERDR 367
Query: 260 EGRREK 265
+ RE+
Sbjct: 368 DRDRER 373
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 39.7 bits (91), Expect = 0.005
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKER----KEG----REGGREGGKKRGREEG 247
P E+ GEKEE G+ E EG + + E KEG EG +E G+ EG
Sbjct: 518 PEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEG 577
Query: 248 RKGGVKERKEGKEGRRE---KRKLAIPSNFGKTEKGFSSLYKT 287
+ KE K+ +E E K +L + K EK S + K+
Sbjct: 578 EEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKS 620
Score = 35.0 bits (79), Expect = 0.13
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
PL EK EK G G EG +G +G RKE G EG ++ +E KG +E
Sbjct: 767 PLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKE-DIAVNGEVEGKEEVEQETKEKGSGREE 825
Query: 256 KEG 258
++G
Sbjct: 826 EKG 828
Score = 30.8 bits (68), Expect = 2.4
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 214 REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE------RKEGKEGRREKRK 267
+E +EG+ ++++ KE + GG G ++ G ++G KG KE EGKE ++ K
Sbjct: 759 KETKEEGKPLQQEKEKE-KAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETK 817
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 39.7 bits (91), Expect = 0.005
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKER----KEG----REGGREGGKKRGREEG 247
P E+ GEKEE G+ E EG + + E KEG EG +E G+ EG
Sbjct: 142 PEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEG 201
Query: 248 RKGGVKERKEGKEGRRE---KRKLAIPSNFGKTEKGFSSLYKT 287
+ KE K+ +E E K +L + K EK S + K+
Sbjct: 202 EEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKS 244
Score = 35.0 bits (79), Expect = 0.13
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
PL EK EK G G EG +G +G RKE G EG ++ +E KG +E
Sbjct: 391 PLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKE-DIAVNGEVEGKEEVEQETKEKGSGREE 449
Query: 256 KEG 258
++G
Sbjct: 450 EKG 452
Score = 30.8 bits (68), Expect = 2.4
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 214 REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE------RKEGKEGRREKRK 267
+E +EG+ ++++ KE + GG G ++ G ++G KG KE EGKE ++ K
Sbjct: 383 KETKEEGKPLQQEKEKE-KAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETK 441
>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
sapiens]
Length = 437
Score = 39.3 bits (90), Expect = 0.007
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
E G + +G E+GR+ +E R R ER+ R+ R+ + R + G +G + R E +
Sbjct: 334 ELGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEAR 393
Query: 260 EG 261
G
Sbjct: 394 GG 395
Score = 31.6 bits (70), Expect = 1.4
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 16/94 (17%)
Query: 198 HSEKGGEKEEGIGERGREGGKE-------GREGRRKER---KEGREGGREGGKKRGREEG 247
H ++ ++E ER RE KE R+ RR+ R KE R RE K + R+
Sbjct: 230 HRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRK 289
Query: 248 RKGGV------KERKEGKEGRREKRKLAIPSNFG 275
R+ +ER+ +E R +A PS G
Sbjct: 290 RRSSRSRERARRERERKEELRGGGGDMAEPSEAG 323
Score = 30.0 bits (66), Expect = 4.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 209 IGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKE-GRREKR 266
+G G +G +E R +ER+ RE + R R+ R K + G E GR E R
Sbjct: 335 LGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEAR 393
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 39.3 bits (90), Expect = 0.007
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREG----RRKERKEGREGGREGGKKRGREEGRKGGVKE 254
SE+ +KE ++GRE G +RKERK R GR + R RE + +E
Sbjct: 26 SEEHNDKEHS-SDKGRERLNSSENGEDRHKRKERKSSR--GRSHSRSRSRERRHRSRSRE 82
Query: 255 RKEGKEGRREKRK 267
RK+ + RE++K
Sbjct: 83 RKKSRSRSRERKK 95
Score = 33.9 bits (76), Expect = 0.29
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 197 LHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERK 256
L+S + GE ER G+ R +ER+ R RE K R R RK +
Sbjct: 43 LNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH-RSRSRERKKSRSRSRERKKSRSRSR 101
Query: 257 EGKEGRREKRK 267
E K+ R R+
Sbjct: 102 ERKKSRSRSRE 112
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 39.3 bits (90), Expect = 0.007
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREG----RRKERKEGREGGREGGKKRGREEGRKGGVKE 254
SE+ +KE ++GRE G +RKERK R GR + R RE + +E
Sbjct: 85 SEEHNDKEHS-SDKGRERLNSSENGEDRHKRKERKSSR--GRSHSRSRSRERRHRSRSRE 141
Query: 255 RKEGKEGRREKRK 267
RK+ + RE++K
Sbjct: 142 RKKSRSRSRERKK 154
Score = 33.9 bits (76), Expect = 0.29
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 197 LHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERK 256
L+S + GE ER G+ R +ER+ R RE K R R RK +
Sbjct: 102 LNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH-RSRSRERKKSRSRSRERKKSRSRSR 160
Query: 257 EGKEGRREKRK 267
E K+ R R+
Sbjct: 161 ERKKSRSRSRE 171
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 38.9 bits (89), Expect = 0.009
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
+EK EKEE +R R+ K+ E R+E +E E +E +K +K + RKE
Sbjct: 49 TEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEE 108
Query: 259 KEGRREKRK 267
+E +++KR+
Sbjct: 109 EEEKKKKRR 117
Score = 37.0 bits (84), Expect = 0.034
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
EK +K+ E+ +E +E ++ +RK +K+ E RE ++ EE KE +E +
Sbjct: 39 EKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEE------KEEEEKE 92
Query: 260 EGRREKRK 267
EGRR K+K
Sbjct: 93 EGRRRKKK 100
Score = 35.8 bits (81), Expect = 0.076
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERK----EGREGGREGGKKRGREEGRKGGVKE 254
+E+ E+EE G+R +E KE R+ + K++K E R+ E KKR R+ +K +E
Sbjct: 16 TEETEEEEEKEGKR-KEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEE 74
Query: 255 RKEGKEGRREKRK 267
R+E +E E+++
Sbjct: 75 REEEEEEEEEEKE 87
Score = 35.0 bits (79), Expect = 0.13
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
+K E+ E E E KEG+ R+++RKE R +E KK+ +E K KE +E K
Sbjct: 7 KKETEETEETEETEEEEEKEGK--RKEKRKEKR---KEKEKKKKTKETEKRKEKEEEEKK 61
Query: 260 EGRREKRK 267
R+ K+K
Sbjct: 62 RKRKRKKK 69
Score = 34.7 bits (78), Expect = 0.17
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
+E+ E EE E +EG ++ + +++ KE ++ +E K++ +EE K ++RK+
Sbjct: 10 TEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKK 69
Query: 259 KE 260
KE
Sbjct: 70 KE 71
Score = 34.7 bits (78), Expect = 0.17
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 201 KGGEKEEGIGERGREGGKEGREGRRK----------ERKEGREGGREGGKKRGREEGRKG 250
K EK++ E + KE E +RK ER+E E E ++ +EEGR+
Sbjct: 38 KEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRR 97
Query: 251 GVKERKEGKEGRREKRK 267
K+++ KE EK+K
Sbjct: 98 KKKKKRRRKEEEEEKKK 114
Score = 33.5 bits (75), Expect = 0.38
Identities = 18/68 (26%), Positives = 39/68 (57%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
EK G+++E E+ +E K+ + ++RKE E ++ +KR +++ + +E +E +
Sbjct: 24 EKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEE 83
Query: 260 EGRREKRK 267
E + E+ K
Sbjct: 84 EEKEEEEK 91
Score = 32.3 bits (72), Expect = 0.84
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRK 249
E+ E+EE E+ E +EGR ++K+++ +E E KKR R+ +K
Sbjct: 74 EREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 38.5 bits (88), Expect = 0.012
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 204 EKEEGIGERG--REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEG 261
E+E + E+ RE E RE R ER+ R+ REG + R R R+ KER + KE
Sbjct: 1137 EQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRR--KERAKSKEK 1194
Query: 262 RREKRKLA 269
+ EK++ A
Sbjct: 1195 KSEKKEKA 1202
Score = 34.3 bits (77), Expect = 0.22
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGG------VK 253
EK +++E ++ RE E R+ ER++ RE RE ++R RE R G +
Sbjct: 1249 EKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRER 1308
Query: 254 ERKEGKEGRREKRK 267
+R+ G+E R K
Sbjct: 1309 DRERGRERDRRDTK 1322
Score = 33.1 bits (74), Expect = 0.49
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 194 YFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEG-REGGREGGKKRGREEGRKGGV 252
+ PL + +KE ER +E K +E +E+KE +E RE ++ RE+ R+
Sbjct: 1226 WLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHS- 1284
Query: 253 KERKEGKEGRREK 265
+ER +E RE+
Sbjct: 1285 RERDRERERERER 1297
Score = 31.6 bits (70), Expect = 1.4
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREG------RRKERKEGREGGREGGKKRGREEGRKGGV 252
+E+ E+E+ E+ E KE + R+ ER++ RE RE ++R RE R G
Sbjct: 1242 AERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGD 1301
Query: 253 KERKEGKEGRREKRK 267
++R ++ R + +
Sbjct: 1302 RDRDRERDRERGRER 1316
Score = 30.4 bits (67), Expect = 3.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
E+ E+E G+R R+ R ++R+ GRE R K+ R R V++R
Sbjct: 1290 ERERERERDRGDRDRD--------RERDRERGRERDRRDTKRHSRSRSRSTPVRDR 1337
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 38.5 bits (88), Expect = 0.012
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 197 LHSEKGGEKEEGIGERGREGGKEGRE---GRRKERKEGREGGREGGKKRGREEGRKGGVK 253
L ++K +K + E+G++ E + G +K+ K+ ++ +G EG KGG +
Sbjct: 155 LDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKGGTE 214
Query: 254 ERKEGKEGRREKRK 267
K+ K+G+++ +K
Sbjct: 215 --KDSKKGKKDSKK 226
Score = 35.8 bits (81), Expect = 0.076
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKE 260
K G+K+ G + E GKE + +K+ K+G++ +G E KGG K K+ K+
Sbjct: 135 KQGKKDSKKG-KDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAK--KDNKK 191
Query: 261 GRREKRKLAIPSNFGKTEKG 280
+++ K + + EKG
Sbjct: 192 DKKDSNKGKDSATESEGEKG 211
Score = 33.1 bits (74), Expect = 0.49
Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKER--KEGREGGREGGKKRGREEGRKGGVKERKE 257
EKGG +++ ++G++ K+G++ + + K + +G K + + K K+ KE
Sbjct: 209 EKGGTEKDS--KKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDANKGDESKDAKKDAKE 266
Query: 258 GKEGRREKRK 267
K+G+++K+K
Sbjct: 267 IKKGKKDKKK 276
Score = 31.2 bits (69), Expect = 1.9
Identities = 18/85 (21%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
P + + K IG++G + K ++ E ++G ++ K + E+G++ + +
Sbjct: 101 PTRTVEVDSKAAEIGKKGED--KTTQKDTTDSESELKQGKKDSKKGKDIEKGKEEKLDAK 158
Query: 256 KEGKEGRREKRKLAIPSNFGKTEKG 280
K+ K+G+++ K + + EKG
Sbjct: 159 KDSKKGKKDAEKGKDSATESEDEKG 183
>gi|17136078 VGF nerve growth factor inducible precursor [Homo
sapiens]
Length = 615
Score = 38.5 bits (88), Expect = 0.012
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKE 260
+GG ++ G+G RG + E RE R+E + +E R GG++R EE + E E +E
Sbjct: 338 QGGARQRGLGGRGLQEAAEERESAREEEEAEQE--RRGGEERVGEEDEEAAEAE-AEAEE 394
Query: 261 GRREKRKLAIPSNFGKTEKG 280
R ++ + F + E G
Sbjct: 395 AERARQNALL---FAEEEDG 411
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 37.7 bits (86), Expect = 0.020
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGR-------EGGREGGKKRGREEGR 248
P +GG + +G + G+ G++ RR+ +K + GG GG+++ G
Sbjct: 298 PAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGG--GGQQKAAVVGV 355
Query: 249 KGGVKERKEGKEGRREKRKLAIPSNFGKTEK 279
K K+R+ GK+ RR+K A + G +K
Sbjct: 356 KSRKKQRRRGKKPRRQKASAAGAKSRGGGDK 386
Score = 36.6 bits (83), Expect = 0.044
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGG--KKRGREEGRKGGVKERKEG 258
+ G+K G + R G E ++GR++E K R G GG KK R + GG K R+ G
Sbjct: 185 RSGKKPRRRGAKSR--GDEDKKGRQREAKS-RFGKTRGGRRKKHRRPKPAAGGAKSRRGG 241
Query: 259 -KEGRREKRKLAIPSNFGKTEKGFS 282
K+ ++++R+ + GK+ G S
Sbjct: 242 GKKPQKQRRRGQKAATGGKSRVGKS 266
Score = 34.7 bits (78), Expect = 0.17
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 202 GGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKG-GVKERKEGKE 260
GG+K G++G GKE R+ +K G R GG+++ G K G + RK +
Sbjct: 67 GGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRR 126
Query: 261 GRR 263
G++
Sbjct: 127 GQK 129
Score = 32.0 bits (71), Expect = 1.1
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 202 GGEKEEGIGERGREGGKEGREGRRKERKEGREGG---REGGKKRG-REEGRKGGVKERKE 257
G +K +G + R+ K+ R G++ R++ G R GG K+G RE R+G +++
Sbjct: 346 GQQKAAVVGVKSRK--KQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPR 403
Query: 258 GKEGRREKRK 267
+ RR +K
Sbjct: 404 WQNPRRRAQK 413
Score = 32.0 bits (71), Expect = 1.1
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 201 KGGEKEEGIGERGREGGKEGREG------RRKERKEGREGGREGGKKRGREEGRK----- 249
+GG ++G+ E R G +GR+ RR+ +K R GG K+ R G K
Sbjct: 381 RGGGDKKGLREAKRRG--DGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSR 438
Query: 250 -------GGVKERKEGKEGRREKRKLAIPSNFGKTE 278
GG K R+ G++ R++ + S K +
Sbjct: 439 GGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQ 474
Score = 31.2 bits (69), Expect = 1.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 208 GIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKG-GVKERKEGKEGRR 263
G +R R GG + R G + G++ GGKK R + R G G K GK+ R
Sbjct: 762 GGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAAAGGKKPLR 818
Score = 30.8 bits (68), Expect = 2.4
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 199 SEKGG----EKEEGIGERGREGGKE--GRE---GRRKERKEGREGGREGGKKRGREEGRK 249
S +GG +K+ G++ GGK G+ G +K R++G+ G K+RG
Sbjct: 237 SRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRG---AAT 293
Query: 250 GGVKERKEGKEGRREK 265
G K +G+ GR K
Sbjct: 294 AGEKPAAKGRGGRGPK 309
Score = 29.6 bits (65), Expect = 5.4
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 202 GGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEG 261
GG+K G++ R+ E R ++K+GR+ G K R GG+K
Sbjct: 446 GGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTK-----SRGGGLKSHSGKNLW 500
Query: 262 RREKR 266
RR ++
Sbjct: 501 RRGQK 505
Score = 29.6 bits (65), Expect = 5.4
Identities = 20/68 (29%), Positives = 25/68 (36%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
++ G+K RG G K G K R G R G K + GG K R+ G
Sbjct: 712 QRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGG 771
Query: 260 EGRREKRK 267
R K
Sbjct: 772 AKSRSGEK 779
Score = 28.9 bits (63), Expect = 9.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKG-----GVKE 254
+K G + E G+ G ++ RR + G R GG K+ +++ R+G G K
Sbjct: 202 DKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKS 261
Query: 255 RKEGKEGRREKR 266
R G +K+
Sbjct: 262 RVGKSRGGGDKK 273
Score = 28.9 bits (63), Expect = 9.2
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 205 KEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
K G G + G + R K+ + G+ G G K RG GG K R G R
Sbjct: 695 KSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRG-----SGGAKSRGSGGAKSRS 749
Query: 265 KRKLAIPSNFG 275
+K A + G
Sbjct: 750 GKKAAASKSHG 760
>gi|13129006 nucleolar protein GU2 [Homo sapiens]
Length = 737
Score = 37.7 bits (86), Expect = 0.020
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKR--GREEGRKGGVK 253
++ G G GR GG+ G R+ R+ R G R+ G++R R R GG K
Sbjct: 678 QRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHK 733
Score = 33.1 bits (74), Expect = 0.49
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 212 RGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
R R G GR GR R GR GGR G + R +G + G ++ + G R + +
Sbjct: 677 RQRSGWSSGRSGR-SGRSGGRSGGRSGRQSR---QGSRSGSRQDGRRRSGNRNRSR 728
Score = 30.0 bits (66), Expect = 4.1
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 193 EYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGV 252
EY+ ++ + G GR G + GR G R + GR+ R+G + R++GR+
Sbjct: 666 EYYDGNTSSNSRQRSGWSS-GRSG-RSGRSGGRSGGRSGRQ-SRQGSRSGSRQDGRRRSG 722
Query: 253 KERKEGKEGRR 263
+ G +
Sbjct: 723 NRNRSRSGGHK 733
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 37.4 bits (85), Expect = 0.026
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
SE G E E GE G EG ++ E GRE G + R R K + +
Sbjct: 694 SESGSESGEQ-GESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDS 752
Query: 259 KEGRREKRK 267
++G +E K
Sbjct: 753 EDGEKENEK 761
>gi|239749652 PREDICTED: hypothetical protein [Homo sapiens]
Length = 60
Score = 37.4 bits (85), Expect = 0.026
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 8/46 (17%)
Query: 215 EGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKE 260
EGGKE + GR++ERK+ +E +K+ RE+G K K+RK+ KE
Sbjct: 2 EGGKERKRGRKRERKKEKE------RKKEREKGNK--EKKRKKEKE 39
Score = 32.3 bits (72), Expect = 0.84
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 233 EGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
EGG+E +KRGR+ RK + +KE ++G +EK++
Sbjct: 2 EGGKE--RKRGRKRERKKEKERKKEREKGNKEKKR 34
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,033,933
Number of Sequences: 37866
Number of extensions: 996440
Number of successful extensions: 7737
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 5150
Number of HSP's gapped (non-prelim): 1738
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.