Guide to the Human Genome
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Name: EXPH5 Sequence: fasta or formatted (1801aa) NCBI GI: 221316754
Description:

exophilin 5 isoform c

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [1989aa] exophilin 5 isoform a
alt prot [1913aa] exophilin 5 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         76           2
 C cysteine            1.2         22           1
 D aspartate           4.9         89           2
 E glutamate           7.7        139           3
 F phenylalanine       4.2         75           2
 G glycine             4.8         86           1
 H histidine           2.9         52           2
 I isoleucine          3.2         58           2
 K lysine              6.2        111           2
 L leucine             6.7        121           2
 M methionine          1.7         30           1
 N asparagine          6.3        113           2
 P proline             7.1        127           3
 Q glutamine           4.9         88           3
 R arginine            6.1        109           2
 S serine             15.2        273           3
 T threonine           6.3        113           3
 V valine              4.1         74           2
 W tryptophan          0.7         13           1
 Y tyrosine            1.8         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   exophilin 5 isoform c 
EXPH5                 1.000   exophilin 5 isoform b 
EXPH5                 1.000   exophilin 5 isoform a 
DSPP                  0.007   dentin sialophosphoprotein preproprotein 
GON4L                 0.006   gon-4-like isoform a 
NOLC1                 0.006   nucleolar and coiled-body phosphoprotein 1 
LOC100294236          0.006   PREDICTED: similar to diffuse panbronchiolitis crit...
ATRX                  0.006   transcriptional regulator ATRX isoform 2 
ATRX                  0.006   transcriptional regulator ATRX isoform 1 
MUC12                 0.006   PREDICTED: mucin 12, cell surface associated 
SRRM2                 0.005   splicing coactivator subunit SRm300 
MLL                   0.005   myeloid/lymphoid or mixed-lineage leukemia protein [...
MUC16                 0.005   mucin 16 
MUC3B                 0.005   PREDICTED: mucin 3B, cell surface associated, parti...
MUC3A                 0.005   PREDICTED: mucin 3A, intestinal 
TRAF3IP1              0.005   TNF receptor-associated factor 3 interacting protein...
MUC12                 0.005   PREDICTED: mucin 12 
NAV2                  0.004   neuron navigator 2 isoform 1 
ATMIN                 0.004   ATM interactor 
DPCR1                 0.004   diffuse panbronchiolitis critical region 1 protein ...
DOCK1                 0.004   dedicator of cytokinesis 1 
LOC100134138          0.004   PREDICTED: similar to mucin, partial 
NIPBL                 0.004   delangin isoform B 
NIPBL                 0.004   delangin isoform A 
ERCC5                 0.004   XPG-complementing protein 
MUC4                  0.004   mucin 4 isoform a 
NEFM                  0.004   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.004   neurofilament, medium polypeptide 150kDa isoform 2 ...
MLLT3                 0.004   myeloid/lymphoid or mixed-lineage leukemia (trithor...
CDKN2AIP              0.004   CDKN2A interacting protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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